ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbah63h02 | 603 | BJ553051 | not_full | emb|X62388.1|HV1433PH H.vulgare mRNA for 14-3-3 protein homologue (14-3-3a) Length = 1361 | 241 | not_full | 1433A_HORVU (P29305) 14-3-3-like protein A (14-3-3A) Length = 262 | 131 | -- | --- | - | -- | --- | - |
| rbah63h01 | 567 | BJ486879 | not_full | gb|AF346003.1|AF346003 Lolium perenne malate dehydrogenase mRNA, partial cds Length = 587 | 117 | not_full | MDHC_MAIZE (Q08062) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) Length = 332 | 78 | -- | --- | - | -- | --- | - |
| rbah63g24 | 590 | BJ486878 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 455 | not_full | RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512 (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 | 162 | -- | --- | - | -- | --- | - |
| rbah63g23 | 681 | BJ486877 | not_full | gb|DQ019635.1| Triticum aestivum U2AF large subunit (U2AF65) mRNA, complete cds Length = 1786 | 109 | not_full | U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor 50 kDa subunit) (U2 snRNP auxiliary factor large subunit) Length = 416 | 21 | -- | --- | - | -- | --- | - |
| rbah63g22 | 301 | BJ553050 | not_full | gb|AF262983.1|AF262983 Triticum aestivum cyclophilin A-2 (CyP2) mRNA, complete cds Length = 845 | 38 | not_full | CYPH_LYCES (P21568) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) Length = 171 | 43 | -- | --- | - | -- | --- | - |
| rbah63g20 | 445 | BJ553049 | not_full | emb|AJ234400.1|HVU234400 Hordeum vulgare partial mRNA; clone cMWG0645 Length = 1050 | 500 | not_full | ACT3_ORYSA (P17299) Actin-3 Length = 377 | 399 | -- | --- | - | -- | --- | - |
| rbah63g19 | 508 | BJ553048 | not_full | ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 | 52 | not_full | TKTC_MAIZE (Q7SIC9) Transketolase, chloroplast (EC 2.2.1.1) (TK) Length = 675 | 63 | -- | --- | - | -- | --- | - |
| rbah63g18 | 684 | BJ486876 | not_full | ref|XM_468478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 393 | 75 | not_full | VATF_ARATH (Q9ZQX4) Probable vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) Length = 128 | 27 | -- | --- | - | -- | --- | - |
| rbah63g17 | 669 | BJ486875 | not_full | emb|X52384.1|ZMPK1 Maize mRNA for putative protein kinase Length = 2693 | 83 | not_full | KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) Length = 817 | 500 | -- | --- | - | -- | --- | - |
| rbah63g16 | 547 | BJ486874 | not_full | dbj|AK120928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P13, full insert sequence Length = 4399 | 49 | not_full | CLPP_CARHZ (Q3AF96) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) Length = 195 | 349 | -- | --- | - | -- | --- | - |
| rbah63g15 | 598 | BJ486873 | not_full | ref|NM_189108.2| Oryza sativa (japonica cultivar-group), mRNA Length = 934 | 53 | not_full | RUBR1_CHLTE (P58992) Rubredoxin 1 (Rd 1) Length = 69 | 36 | -- | --- | - | -- | --- | - |
| rbah63g13 | 515 | BJ553047 | not_full | ref|NM_185010.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1709 | 168 | not_full | ACT2_TRYBB (P12433) Actin B Length = 376 | 312 | -- | --- | - | -- | --- | - |
| rbah63g09 | 591 | BJ486872 | not_full | ref|NM_194623.1| Oryza sativa (japonica cultivar-group) putative o-methyltransferase ZRP4 (OSJNBa0023I19.21), mRNA Length = 1101 | 71 | not_full | ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT) Length = 364 | 62 | -- | --- | - | -- | --- | - |
| rbah63g07 | 462 | BJ553046 | not_full | dbj|AK059186.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-G09, full insert sequence Length = 611 | 178 | not_full | CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B) Length = 895 | 40 | -- | --- | - | -- | --- | - |
| rbah63g05 | 646 | BJ486871 | not_full | ref|XM_464580.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2963 | 57 | not_full | HNF4A_HUMAN (P41235) Hepatocyte nuclear factor 4-alpha (HNF-4-alpha) (Transcription factor HNF-4) (Transcription factor 14) Length = 465 | 8 | -- | --- | - | -- | --- | - |
| rbah63g04 | 135 | BJ486870 | not_full | gb|BT009239.1| Triticum aestivum clone wlk1.pk0004.e7:fis, full insert mRNA sequence Length = 1415 | 39 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah63g03 | 539 | BJ486869 | not_full | gb|BT009239.1| Triticum aestivum clone wlk1.pk0004.e7:fis, full insert mRNA sequence Length = 1415 | 54 | not_full | LPAT_MAIZE (Q41745) 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 (EC 2.3.1.51) (Phospholipid synthesis protein 1) Length = 374 | 14 | -- | --- | - | -- | --- | - |
| rbah63g01 | 485 | BJ553045 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 409 | not_full | VE2_HPV45 (P36794) Regulatory protein E2 Length = 368 | 12 | -- | --- | - | -- | --- | - |
| rbah63f24 | 620 | BJ486868 | not_full | gb|AY103974.1| Zea mays PCO123560 mRNA sequence Length = 1889 | 500 | not_full | G3PB_ARATH (P25857) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) Length = 447 | 258 | -- | --- | - | -- | --- | - |
| rbah63f23 | 594 | BJ553044 | not_full | ref|XM_466605.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2494 | 102 | not_full | ISPG_PARUW (Q6MD85) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 654 | 160 | -- | --- | - | -- | --- | - |
| rbah63f21 | 350 | BJ486867 | not_full | emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein Length = 1225 | 500 | not_full | PIP12_ORYSA (Q7XSQ9) Probable aquaporin PIP1.2 (Plasma membrane intrinsic protein 1.2) (OsPIP1.2) Length = 282 | 45 | -- | --- | - | -- | --- | - |
| rbah63f20 | 534 | BJ486866 | not_full | ref|XM_477101.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1574 | 40 | not_full | PTG3C_MYCGE (P47315) PTS system glucose-specific EIICBA component (EIICBA-Glc) (EII-Glc/EIII-Glc) [Includes: Glucose permease IIC component (PTS system glucose-specific EIIC component); Glucose-specific phosphotransferase enzyme IIB component (EC 2.7.1.6 | 6 | -- | --- | - | -- | --- | - |
| rbah63f19 | 456 | BJ486865 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 74 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 25 | -- | --- | - | -- | --- | - |
| rbah63f18 | 597 | BJ553043 | not_full | gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 | 64 | not_full | ERF1Z_ARATH (P35614) Eukaryotic peptide chain release factor subunit 1-3 (eRF1-3) (Eukaryotic release factor 1-3) (Omnipotent suppressor protein 1 homolog 3) (SUP1 homolog 3) Length = 435 | 55 | -- | --- | - | -- | --- | - |
| rbah63f17 | 432 | BJ553042 | not_full | emb|AJ581660.1|HVU581660 Hordeum vulgare chloroplast partial mRNA for nucleotide pyrophosphatase/phosphodiesterase (npp gene) Length = 1268 | 322 | not_full | NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) Length = 368 | 9 | -- | --- | - | -- | --- | - |
| rbah63f16 | 446 | BJ486864 | not_full | gb|AC096730.3| Homo sapiens BAC clone RP11-66A14 from 4, complete sequence Length = 188921 | 11 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbah63f15 | 206 | BJ486863 | not_full | ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1439 | 16 | not_full | TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12 Length = 586 | 3 | -- | --- | - | -- | --- | - |
| rbah63f14 | 494 | BJ486862 | not_full | emb|AL096866.10|HSJ247G22 Human DNA sequence from clone RP1-247G22 on chromosome 6p12.2-21.2, complete sequence Length = 120487 | 27 | not_full | CHEB2_RALEJ (Q46PH7) Chemotaxis response regulator protein-glutamate methylesterase 2 (EC 3.1.1.61) Length = 356 | 2 | -- | --- | - | -- | --- | - |
| rbah63f12 | 608 | BJ486861 | not_full | ref|XM_507580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011E04.125 mRNA Length = 1513 | 39 | not_full | QORL_ARATH (Q9ZUC1) Quinone oxidoreductase-like protein At1g23740, chloroplast precursor (EC 1.-.-.-) Length = 386 | 99 | -- | --- | - | -- | --- | - |
| rbah63f11 | 629 | BJ486860 | not_full | ref|XM_507580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011E04.125 mRNA Length = 1513 | 42 | not_full | QORL_ARATH (Q9ZUC1) Quinone oxidoreductase-like protein At1g23740, chloroplast precursor (EC 1.-.-.-) Length = 386 | 24 | -- | --- | - | -- | --- | - |
| rbah63f10 | 558 | BJ486859 | not_full | dbj|AK105686.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-B10, full insert sequence Length = 3335 | 35 | not_full | DYSF_HUMAN (O75923) Dysferlin (Dystrophy-associated fer-1-like protein) (Fer-1-like protein 1) Length = 2080 | 14 | -- | --- | - | -- | --- | - |
| rbah63f09 | 296 | BJ553041 | not_full | emb|AJ310426.1|HVU310426 Hordeum vulgare mRNA for cathepsin B (cathB gene) Length = 1277 | 20 | not_full | CATB_RAT (P00787) Cathepsin B precursor (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Contains: Cathepsin B light chain; Cathepsin B heavy chain] Length = 339 | 15 | -- | --- | - | -- | --- | - |
| rbah63f08 | 437 | BJ486858 | not_full | ref|XM_463361.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1656 | 90 | not_full | CCP3_MOUSE (Q9JKK0) Calcipressin-3 (Down syndrome candidate region 1-like protein 2) (Myocyte-enriched calcineurin-interacting protein 3) (MCIP3) Length = 239 | 4 | -- | --- | - | -- | --- | - |
| rbah63f07 | 439 | BJ486857 | not_full | dbj|D86327.1| Triticum aestivum mRNA for catalase, complete cds Length = 1573 | 85 | not_full | CATA1_WHEAT (Q43206) Catalase-1 (EC 1.11.1.6) Length = 492 | 43 | -- | --- | - | -- | --- | - |
| rbah63f06 | 626 | BJ486856 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 423 | not_full | RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 | 165 | -- | --- | - | -- | --- | - |
| rbah63f05 | 618 | BJ486855 | not_full | ref|XM_474331.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 14001 | 31 | not_full | IAP2_DROME (Q24307) Apoptosis 2 inhibitor (Inhibitor of apoptosis 2) (dIAP2) (DIAP) (IAP homolog A) (IAP-like protein) (DILP) Length = 498 | 219 | -- | --- | - | -- | --- | - |
| rbah63f03 | 431 | BJ486854 | not_full | gb|AY596574.1| Saccharum officinarum clone SCCCLR1072A04, complete sequence Length = 2198 | 24 | not_full | DAPF_STRCO (O69969) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase) Length = 289 | 20 | -- | --- | - | -- | --- | - |
| rbah63e23 | 380 | BJ553040 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 34 | not_full | CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) Length = 324 | 34 | -- | --- | - | -- | --- | - |
| rbah63e22 | 429 | BJ486853 | not_full | gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 | 92 | not_full | RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 | 28 | -- | --- | - | -- | --- | - |
| rbah63e21 | 181 | BJ486852 | not_full | emb|X57407.1|TAPPSBP Wheat PsbP mRNA for 23 kDa oxygen evolving protein of photosystem II Length = 967 | 47 | not_full | RF1_PICTO (Q6KZ24) Peptide chain release factor subunit 1 (Translation termination factor aRF1) Length = 410 | 1 | -- | --- | - | -- | --- | - |
| rbah63e20 | 567 | BJ486851 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 30 | not_full | RP1_CANFA (Q8MJ04) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog) Length = 2141 | 2 | -- | --- | - | -- | --- | - |
| rbah63e19 | 471 | BJ486850 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 75 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 23 | -- | --- | - | -- | --- | - |
| rbah63e18 | 529 | BJ486849 | not_full | gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 | 99 | not_full | RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 | 30 | -- | --- | - | -- | --- | - |
| rbah63e17 | 406 | BJ553039 | not_full | gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 | 53 | not_full | CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) Length = 324 | 43 | -- | --- | - | -- | --- | - |
| rbah63e15 | 479 | BJ553038 | not_full | gb|BT009041.1| Triticum aestivum clone wdk5c.pk006.c9:fis, full insert mRNA sequence Length = 1355 | 80 | not_full | CYSK_WHEAT (P38076) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase A) (OAS-TL A) Length = 325 | 49 | -- | --- | - | -- | --- | - |
| rbah63e14 | 527 | BJ486848 | not_full | ref|NM_189098.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1770 | 465 | not_full | TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 precursor Length = 589 | 14 | -- | --- | - | -- | --- | - |
| rbah63e13 | 419 | BJ553037 | not_full | gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1577 | 145 | not_full | ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) Length = 388 | 55 | -- | --- | - | -- | --- | - |
| rbah63e07 | 414 | BJ486847 | not_full | gb|AY110901.1| Zea mays CL7341_1 mRNA sequence Length = 746 | 41 | not_full | UREE_RHOS4 (Q3J156) Urease accessory protein ureE Length = 182 | 3 | -- | --- | - | -- | --- | - |
| rbah63e06 | 562 | BJ553036 | not_full | gb|AF493562.1| Hordeum vulgare subsp. vulgare sucrose-phosphatase mRNA, complete cds Length = 1583 | 75 | not_full | UUP_ECOLI (P43672) ABC transporter ATP-binding protein uup Length = 635 | 21 | -- | --- | - | -- | --- | - |
| rbah63e05 | 345 | BJ486846 | not_full | ref|NM_190784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 | 76 | not_full | PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast precursor (CP22) Length = 276 | 12 | -- | --- | - | -- | --- | - |
