ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63f18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete seq... 182 9e-43
2ref|XM_478927.1| Oryza sativa (japonica cultivar-group), mRNA 170 3e-39
3gb|BT018866.1| Zea mays clone EL01N0561B12.d mRNA sequence 170 3e-39
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
5dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
6dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
7dbj|AK103740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 3e-39
8ref|XM_469434.1| Oryza sativa (japonica cultivar-group), mRNA 167 5e-38
9gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome... 167 5e-38
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 167 5e-38
11gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genom... 167 5e-38
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
13dbj|AK121869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
14dbj|AK102687.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
15dbj|AK065768.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 5e-35
16gb|BT018379.1| Zea mays clone EL01N0307H02.d mRNA sequence 129 1e-26
17gb|DQ241835.1| Solanum tuberosum clone 180C08 eukaryotic peptide... 98 4e-17
18gb|DQ294253.1| Solanum tuberosum clone 069E03 eukaryotic peptide... 92 2e-15
19gb|AC136505.41| Medicago truncatula clone mth2-24f15, complete s... 68 4e-08
20ref|XM_475154.1| Oryza sativa (japonica cultivar-group), predic... 60 9e-06
21gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome... 60 9e-06
22gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome... 60 9e-06
23dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
24dbj|AK064587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
25ref|NM_101163.1| Arabidopsis thaliana ERF1-2 (EUKARYOTIC RELEASE... 54 5e-04
26gb|AY034963.1| Arabidopsis thaliana putative eukaryotic peptide ... 54 5e-04
27emb|BX815774.1|CNS0AAVC Arabidopsis thaliana Full-length cDNA Co... 54 5e-04
28gb|AY086623.1| Arabidopsis thaliana clone 26360 mRNA, complete s... 54 5e-04
29gb|AC012187.3|F13K23 Sequence of BAC F13K23 from Arabidopsis tha... 54 5e-04
30emb|X69374.1|ATSLP A.thaliana mRNA for suppressor-like protein 54 5e-04
31gb|U40218.1|ATUERF12 Arabidopsis thaliana eukaryotic release fac... 54 5e-04
32gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete se... 52 0.002
33ref|NM_001028936.1| Caenorhabditis elegans T05H4.6 (T05H4.6) mRN... 52 0.002
34gb|AF016452.1| Caenorhabditis elegans cosmid T05H4, complete seq... 48 0.033
35ref|NM_113022.3| Arabidopsis thaliana ADOF2; DNA binding / trans... 40 8.1
36gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosom... 40 8.1
37gb|AY045847.1| Arabidopsis thaliana putative Dof zinc finger pro... 40 8.1
38gb|AC113152.4| Homo sapiens BAC clone RP11-245L10 from 4, comple... 40 8.1
39gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 gen... 40 8.1
40gb|AC023781.5| Homo sapiens chromosome 8, clone RP11-149P24, com... 40 8.1
41gb|AY444799.1| HIV-1 isolate 99US.MSC4068 from USA gag protein (... 40 8.1
42dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
43dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
44emb|BX826242.1|CNS0A501 Arabidopsis thaliana Full-length cDNA Co... 40 8.1
45gb|AC106053.6| Homo sapiens BAC clone RP11-818B6 from 2, complet... 40 8.1
46gb|AC013467.8| Homo sapiens BAC clone RP11-451F14 from 2, comple... 40 8.1
47gb|AC010137.3|AC010137 Homo sapiens BAC clone RP11-169D1 from Y,... 40 8.1
48gb|AF404348.1| Uncultured Geobacter sp. clone NS1 16S ribosomal ... 40 8.1
49dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
50dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome 40 8.1
51dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
52emb|BX539342.9| Mouse DNA sequence from clone RP24-67F19 on chro... 40 8.1
53dbj|BS000090.1| Pan troglodytes chromosome 22 clone:PTB-057C10, ... 40 8.1
54dbj|BS000089.1| Pan troglodytes chromosome 22 clone:PTB-054B14, ... 40 8.1
55dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 8.1
56dbj|AP001688.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.1
57gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
58gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome 40 8.1
59gb|AC122432.4| Mus musculus BAC clone RP24-187F8 from 7, complet... 40 8.1
60gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 8.1
61dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 8.1
62dbj|AP006415.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 8.1
63dbj|AB017565.1| Arabidopsis thaliana adof2 mRNA for Dof zinc fin... 40 8.1
64dbj|AP000961.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 8.1

>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence
          Length = 127914

 Score =  182 bits (92), Expect = 9e-43
 Identities = 173/200 (86%)
 Strand = Plus / Minus

                                                                          
Query: 398    tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457
              ||||| ||||||||||||||||| || |||  ||| |||||||| ||||| |||||||  
Sbjct: 118481 tcagagtcttcatagacaccctcgtcatcagaaagctcatcaaaagaacggatgtccaat 118422

                                                                          
Query: 458    tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517
              ||||||||||  || ||||||||||||||||| ||||| || ||||| ||||| || |||
Sbjct: 118421 tgatagcgcaacatgccaccaatgccaccaaatcctctgcaaaactgagatccttcttga 118362

                                                                          
Query: 518    gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577
              || || ||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||
Sbjct: 118361 gacttgttggtaacaaattcaagtgtgcacccaaactttttgtactcattggcaaaccat 118302

                                  
Query: 578    tccaaaagtgaggtcttctc 597
              ||||| |||||||| |||||
Sbjct: 118301 tccaagagtgaggttttctc 118282



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>ref|XM_478927.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1840

 Score =  170 bits (86), Expect = 3e-39
 Identities = 176/206 (85%)
 Strand = Plus / Minus

                                                                        
Query: 376  catgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaagatc 435
            ||||||||||  || |||||| ||||| |||||||| |  ||||||||||||  ||| ||
Sbjct: 1469 catgtgattggctgattgctaatcagagtcttcatacaatccctcatcgtcagaaagctc 1410

                                                                        
Query: 436  atcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccctct 495
            |||||| || || || || ||||| || |||| |||||||||||||||||| || |||||
Sbjct: 1409 atcaaatgaccggatatctagctggtaacgcaagataccaccaatgccaccgaatcctct 1350

                                                                        
Query: 496  acagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaactt 555
            ||| ||||| |||||||| ||||||||||| || ||||| ||||| | ||| ||||||||
Sbjct: 1349 acaaaactgagatccctcttgagatttattagtgacaaactcaagcgagcaaccaaactt 1290

                                      
Query: 556  cttgtattcattagcaaaccattcca 581
            ||||||||||||||||||||||||||
Sbjct: 1289 cttgtattcattagcaaaccattcca 1264



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>gb|BT018866.1| Zea mays clone EL01N0561B12.d mRNA sequence
          Length = 1947

 Score =  170 bits (86), Expect = 3e-39
 Identities = 179/210 (85%)
 Strand = Plus / Minus

                                                                        
Query: 372  caggcatgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaa 431
            |||||||| |||||  || |||||||||||| |||||||| ||| | ||||| |||  ||
Sbjct: 1457 caggcatgagattggctgattgctagtcagagtcttcatacacatcgtcatcatcagaaa 1398

                                                                        
Query: 432  gatcatcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaacc 491
            | |||||||| ||||| || |||||||| |||||||  || ||||||||||||||||| |
Sbjct: 1397 gctcatcaaaagaacggatatccagctggtagcgcaacatgccaccaatgccaccaaatc 1338

                                                                        
Query: 492  ctctacagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaa 551
            ||||||||||||| |||||||||||||| || ||||| ||||| || |  | ||| ||||
Sbjct: 1337 ctctacagaactgggatccctcctgagacttgttggtcacaaactccaacgagcaaccaa 1278

                                          
Query: 552  acttcttgtattcattagcaaaccattcca 581
            |||||||||||||||| |||||||||||||
Sbjct: 1277 acttcttgtattcattggcaaaccattcca 1248



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  170 bits (86), Expect = 3e-39
 Identities = 176/206 (85%)
 Strand = Plus / Plus

                                                                            
Query: 376      catgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaagatc 435
                ||||||||||  || |||||| ||||| |||||||| |  ||||||||||||  ||| ||
Sbjct: 23851834 catgtgattggctgattgctaatcagagtcttcatacaatccctcatcgtcagaaagctc 23851893

                                                                            
Query: 436      atcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccctct 495
                |||||| || || || || ||||| || |||| |||||||||||||||||| || |||||
Sbjct: 23851894 atcaaatgaccggatatctagctggtaacgcaagataccaccaatgccaccgaatcctct 23851953

                                                                            
Query: 496      acagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaactt 555
                ||| ||||| |||||||| ||||||||||| || ||||| ||||| | ||| ||||||||
Sbjct: 23851954 acaaaactgagatccctcttgagatttattagtgacaaactcaagcgagcaaccaaactt 23852013

                                          
Query: 556      cttgtattcattagcaaaccattcca 581
                ||||||||||||||||||||||||||
Sbjct: 23852014 cttgtattcattagcaaaccattcca 23852039



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>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0005G07
          Length = 142850

 Score =  170 bits (86), Expect = 3e-39
 Identities = 176/206 (85%)
 Strand = Plus / Plus

                                                                        
Query: 376  catgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaagatc 435
            ||||||||||  || |||||| ||||| |||||||| |  ||||||||||||  ||| ||
Sbjct: 6761 catgtgattggctgattgctaatcagagtcttcatacaatccctcatcgtcagaaagctc 6820

                                                                        
Query: 436  atcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccctct 495
            |||||| || || || || ||||| || |||| |||||||||||||||||| || |||||
Sbjct: 6821 atcaaatgaccggatatctagctggtaacgcaagataccaccaatgccaccgaatcctct 6880

                                                                        
Query: 496  acagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaactt 555
            ||| ||||| |||||||| ||||||||||| || ||||| ||||| | ||| ||||||||
Sbjct: 6881 acaaaactgagatccctcttgagatttattagtgacaaactcaagcgagcaaccaaactt 6940

                                      
Query: 556  cttgtattcattagcaaaccattcca 581
            ||||||||||||||||||||||||||
Sbjct: 6941 cttgtattcattagcaaaccattcca 6966



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>dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1047_C01
          Length = 97427

 Score =  170 bits (86), Expect = 3e-39
 Identities = 176/206 (85%)
 Strand = Plus / Plus

                                                                         
Query: 376   catgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaagatc 435
             ||||||||||  || |||||| ||||| |||||||| |  ||||||||||||  ||| ||
Sbjct: 40334 catgtgattggctgattgctaatcagagtcttcatacaatccctcatcgtcagaaagctc 40393

                                                                         
Query: 436   atcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccctct 495
             |||||| || || || || ||||| || |||| |||||||||||||||||| || |||||
Sbjct: 40394 atcaaatgaccggatatctagctggtaacgcaagataccaccaatgccaccgaatcctct 40453

                                                                         
Query: 496   acagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaactt 555
             ||| ||||| |||||||| ||||||||||| || ||||| ||||| | ||| ||||||||
Sbjct: 40454 acaaaactgagatccctcttgagatttattagtgacaaactcaagcgagcaaccaaactt 40513

                                       
Query: 556   cttgtattcattagcaaaccattcca 581
             ||||||||||||||||||||||||||
Sbjct: 40514 cttgtattcattagcaaaccattcca 40539



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>dbj|AK103740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138K20, full
            insert sequence
          Length = 1840

 Score =  170 bits (86), Expect = 3e-39
 Identities = 176/206 (85%)
 Strand = Plus / Minus

                                                                        
Query: 376  catgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaagatc 435
            ||||||||||  || |||||| ||||| |||||||| |  ||||||||||||  ||| ||
Sbjct: 1469 catgtgattggctgattgctaatcagagtcttcatacaatccctcatcgtcagaaagctc 1410

                                                                        
Query: 436  atcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccctct 495
            |||||| || || || || ||||| || |||| |||||||||||||||||| || |||||
Sbjct: 1409 atcaaatgaccggatatctagctggtaacgcaagataccaccaatgccaccgaatcctct 1350

                                                                        
Query: 496  acagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaactt 555
            ||| ||||| |||||||| ||||||||||| || ||||| ||||| | ||| ||||||||
Sbjct: 1349 acaaaactgagatccctcttgagatttattagtgacaaactcaagcgagcaaccaaactt 1290

                                      
Query: 556  cttgtattcattagcaaaccattcca 581
            ||||||||||||||||||||||||||
Sbjct: 1289 cttgtattcattagcaaaccattcca 1264



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>ref|XM_469434.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1713

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Minus

                                                                        
Query: 398  tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457
            ||||| ||||||||||| |||||||| |||  ||| |||||||| |||||||||||||||
Sbjct: 1466 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 1407

                                                                        
Query: 458  tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517
            |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| 
Sbjct: 1406 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 1347

                                                                        
Query: 518  gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577
            ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| 
Sbjct: 1346 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 1287

                
Query: 578  tcca 581
            ||||
Sbjct: 1286 tcca 1283



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>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08
             map R2847, complete sequence
          Length = 100918

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Minus

                                                                         
Query: 398   tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457
             ||||| ||||||||||| |||||||| |||  ||| |||||||| |||||||||||||||
Sbjct: 79892 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 79833

                                                                         
Query: 458   tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517
             |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| 
Sbjct: 79832 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 79773

                                                                         
Query: 518   gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577
             ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| 
Sbjct: 79772 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 79713

                 
Query: 578   tcca 581
             ||||
Sbjct: 79712 tcca 79709



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Minus

                                                                            
Query: 398      tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457
                ||||| ||||||||||| |||||||| |||  ||| |||||||| |||||||||||||||
Sbjct: 27944164 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 27944105

                                                                            
Query: 458      tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517
                |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| 
Sbjct: 27944104 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 27944045

                                                                            
Query: 518      gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577
                ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| 
Sbjct: 27944044 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 27943985

                    
Query: 578      tcca 581
                ||||
Sbjct: 27943984 tcca 27943981



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>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete
             sequence
          Length = 133889

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Plus

                                                                         
Query: 398   tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457
             ||||| ||||||||||| |||||||| |||  ||| |||||||| |||||||||||||||
Sbjct: 80862 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 80921

                                                                         
Query: 458   tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517
             |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| 
Sbjct: 80922 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 80981

                                                                         
Query: 518   gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577
             ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| 
Sbjct: 80982 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 81041

                 
Query: 578   tcca 581
             ||||
Sbjct: 81042 tcca 81045



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Minus

                                                                            
Query: 398      tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457
                ||||| ||||||||||| |||||||| |||  ||| |||||||| |||||||||||||||
Sbjct: 28035488 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 28035429

                                                                            
Query: 458      tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517
                |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| 
Sbjct: 28035428 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 28035369

                                                                            
Query: 518      gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577
                ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| 
Sbjct: 28035368 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 28035309

                    
Query: 578      tcca 581
                ||||
Sbjct: 28035308 tcca 28035305



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>dbj|AK121869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103O08, full
            insert sequence
          Length = 1714

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Minus

                                                                        
Query: 398  tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457
            ||||| ||||||||||| |||||||| |||  ||| |||||||| |||||||||||||||
Sbjct: 1467 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 1408

                                                                        
Query: 458  tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517
            |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| 
Sbjct: 1407 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 1348

                                                                        
Query: 518  gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577
            ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| 
Sbjct: 1347 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 1288

                
Query: 578  tcca 581
            ||||
Sbjct: 1287 tcca 1284



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>dbj|AK102687.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102O11, full
            insert sequence
          Length = 1678

 Score =  167 bits (84), Expect = 5e-38
 Identities = 159/184 (86%)
 Strand = Plus / Minus

                                                                        
Query: 398  tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457
            ||||| ||||||||||| |||||||| |||  ||| |||||||| |||||||||||||||
Sbjct: 1424 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 1365

                                                                        
Query: 458  tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517
            |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| 
Sbjct: 1364 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 1305

                                                                        
Query: 518  gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577
            ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| 
Sbjct: 1304 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 1245

                
Query: 578  tcca 581
            ||||
Sbjct: 1244 tcca 1241



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>dbj|AK065768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043M02, full
           insert sequence
          Length = 1187

 Score =  157 bits (79), Expect = 5e-35
 Identities = 176/207 (85%), Gaps = 1/207 (0%)
 Strand = Plus / Minus

                                                                       
Query: 376 catgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaagatc 435
           ||||||||||  || |||||| ||||| |||||||| |  ||||||||||||  ||| ||
Sbjct: 816 catgtgattggctgattgctaatcagagtcttcatacaatccctcatcgtcagaaagctc 757

                                                                       
Query: 436 atcaaaggaacgaatgtccagctgatag-cgcaggataccaccaatgccaccaaaccctc 494
           |||||| || || || || ||||| ||  |||| |||||||||||||||||| || ||||
Sbjct: 756 atcaaatgaccggatatctagctggtaaacgcaagataccaccaatgccaccgaatcctc 697

                                                                       
Query: 495 tacagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaact 554
           |||| ||||| |||||||| ||||||||||| || ||||| ||||| | ||| |||||||
Sbjct: 696 tacaaaactgagatccctcttgagatttattagtgacaaactcaagcgagcaaccaaact 637

                                      
Query: 555 tcttgtattcattagcaaaccattcca 581
           |||||||||||||||||||||||||||
Sbjct: 636 tcttgtattcattagcaaaccattcca 610



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>gb|BT018379.1| Zea mays clone EL01N0307H02.d mRNA sequence
          Length = 1459

 Score =  129 bits (65), Expect = 1e-26
 Identities = 155/185 (83%)
 Strand = Plus / Minus

                                                                        
Query: 398  tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457
            ||||||| ||||||||| || || || |||  ||| || || || ||||| |||||||| 
Sbjct: 1182 tcagaattttcatagaccccttcgtcatcaaaaagctcgtcgaaagaacggatgtccagt 1123

                                                                        
Query: 458  tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517
            ||||||||||  || ||||||||||||||||| ||||| || ||||| || || || |||
Sbjct: 1122 tgatagcgcaacatgccaccaatgccaccaaatcctctgcaaaactgagacccttcttga 1063

                                                                        
Query: 518  gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577
            ||||| ||||||||||| ||||| ||||||||||| || ||||| ||||| |||||||||
Sbjct: 1062 gatttgttggtaacaaactcaagtgtgcacccaaattttttgtactcattggcaaaccat 1003

                 
Query: 578  tccaa 582
            |||||
Sbjct: 1002 tccaa 998



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>gb|DQ241835.1| Solanum tuberosum clone 180C08 eukaryotic peptide chain release
            factor subunit 1-3-like mRNA, complete cds
          Length = 1614

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 124/149 (83%)
 Strand = Plus / Minus

                                                                        
Query: 434  tcatcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccct 493
            |||||||||||||| ||||| ||||| ||||| ||||| || |||||||||||||| |||
Sbjct: 1339 tcatcaaaggaacgcatgtcaagctggtagcgaaggattcctccaatgccaccaaatcct 1280

                                                                        
Query: 494  ctacagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaac 553
            || ||||||||||| ||||| |||||  | || || ||||| ||||| |  || ||||| 
Sbjct: 1279 ctgcagaactgtgacccctcttgagacctgttagtgacaaactcaagtgaacaaccaaaa 1220

                                         
Query: 554  ttcttgtattcattagcaaaccattccaa 582
             | ||||||||||| |||||||| |||||
Sbjct: 1219 gttttgtattcattggcaaaccactccaa 1191



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>gb|DQ294253.1| Solanum tuberosum clone 069E03 eukaryotic peptide chain release
            factor subunit 1-3-like protein mRNA, complete cds
          Length = 1638

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                        
Query: 434  tcatcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccct 493
            |||||||||||||| ||||| ||||| ||||| ||||| || |||||||||||||| |||
Sbjct: 1346 tcatcaaaggaacgcatgtcaagctggtagcgaaggattcctccaatgccaccaaatcct 1287

                                      
Query: 494  ctacagaactgtgatccctcctgaga 519
            || ||||||||||| ||||| |||||
Sbjct: 1286 ctgcagaactgtgacccctcttgaga 1261



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>gb|AC136505.41| Medicago truncatula clone mth2-24f15, complete sequence
          Length = 122801

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                         
Query: 455   agctgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcc 514
             ||||| ||||| || ||||| ||||| |||||||||||||| || |||||||| || || 
Sbjct: 50520 agctggtagcgaagcatacctccaataccaccaaaccctctgcaaaactgtgacccttct 50579

                                                                         
Query: 515   tgagatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaac 574
             |||||||| ||||| || ||||| || | ||| |||||  | ||||| ||||| ||||||
Sbjct: 50580 tgagatttgttggtcacgaattccagcgagcatccaaatcttttgtactcattcgcaaac 50639

               
Query: 575   ca 576
             ||
Sbjct: 50640 ca 50641



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>ref|XM_475154.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1323

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 461  tagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagat 520
            ||||||||||| ||||| || |||||||| || |  |||||||||||||| ||||| || 
Sbjct: 1247 tagcgcaggatcccaccgatcccaccaaagccacggcagaactgtgatccttcctgcgac 1188

                                      
Query: 521  ttattggtaacaaattcaagggtgca 546
            || ||||| ||||| || ||||||||
Sbjct: 1187 ttgttggtgacaaactccagggtgca 1162



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>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09,
              complete sequence
          Length = 167318

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                          
Query: 461    tagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagat 520
              ||||||||||| ||||| || |||||||| || |  |||||||||||||| ||||| || 
Sbjct: 135369 tagcgcaggatcccaccgatcccaccaaagccacggcagaactgtgatccttcctgcgac 135310

                                        
Query: 521    ttattggtaacaaattcaagggtgca 546
              || ||||| ||||| || ||||||||
Sbjct: 135309 ttgttggtgacaaactccagggtgca 135284



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>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12,
            complete sequence
          Length = 121293

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 461  tagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagat 520
            ||||||||||| ||||| || |||||||| || |  |||||||||||||| ||||| || 
Sbjct: 6164 tagcgcaggatcccaccgatcccaccaaagccacggcagaactgtgatccttcctgcgac 6105

                                      
Query: 521  ttattggtaacaaattcaagggtgca 546
            || ||||| ||||| || ||||||||
Sbjct: 6104 ttgttggtgacaaactccagggtgca 6079



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                            
Query: 461      tagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagat 520
                ||||||||||| ||||| || |||||||| || |  |||||||||||||| ||||| || 
Sbjct: 17875415 tagcgcaggatcccaccgatcccaccaaagccacggcagaactgtgatccttcctgcgac 17875356

                                          
Query: 521      ttattggtaacaaattcaagggtgca 546
                || ||||| ||||| || ||||||||
Sbjct: 17875355 ttgttggtgacaaactccagggtgca 17875330



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>dbj|AK064587.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-G01, full
            insert sequence
          Length = 1973

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 461  tagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagat 520
            ||||||||||| ||||| || |||||||| || |  |||||||||||||| ||||| || 
Sbjct: 1366 tagcgcaggatcccaccgatcccaccaaagccacggcagaactgtgatccttcctgcgac 1307

                                      
Query: 521  ttattggtaacaaattcaagggtgca 546
            || ||||| ||||| || ||||||||
Sbjct: 1306 ttgttggtgacaaactccagggtgca 1281



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>ref|NM_101163.1| Arabidopsis thaliana ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2);
            translation release factor/ translation release factor,
            codon specific AT1G12920 (ERF1-2) mRNA, complete cds
          Length = 1613

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 92/111 (82%), Gaps = 2/111 (1%)
 Strand = Plus / Minus

                                                                        
Query: 470  ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529
            ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || 
Sbjct: 1333 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 1274

                                                               
Query: 530  acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579
            ||||| ||||| ||||| || |||| | ||||| ||||| |||||||||||
Sbjct: 1273 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 1224



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>gb|AY034963.1| Arabidopsis thaliana putative eukaryotic peptide chain release factor
            subunit 1 (At1g12920) mRNA, complete cds
          Length = 1634

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 92/111 (82%), Gaps = 2/111 (1%)
 Strand = Plus / Minus

                                                                        
Query: 470  ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529
            ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || 
Sbjct: 1329 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 1270

                                                               
Query: 530  acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579
            ||||| ||||| ||||| || |||| | ||||| ||||| |||||||||||
Sbjct: 1269 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 1220



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>emb|BX815774.1|CNS0AAVC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS93ZA07 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1553

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 92/111 (82%), Gaps = 2/111 (1%)
 Strand = Plus / Minus

                                                                        
Query: 470  ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529
            ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || 
Sbjct: 1316 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 1257

                                                               
Query: 530  acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579
            ||||| ||||| ||||| || |||| | ||||| ||||| |||||||||||
Sbjct: 1256 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 1207



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>gb|AY086623.1| Arabidopsis thaliana clone 26360 mRNA, complete sequence
          Length = 1613

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 92/111 (82%), Gaps = 2/111 (1%)
 Strand = Plus / Minus

                                                                        
Query: 470  ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529
            ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || 
Sbjct: 1333 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 1274

                                                               
Query: 530  acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579
            ||||| ||||| ||||| || |||| | ||||| ||||| |||||||||||
Sbjct: 1273 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 1224



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>gb|AC012187.3|F13K23 Sequence of BAC F13K23 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 74328

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 92/111 (82%), Gaps = 2/111 (1%)
 Strand = Plus / Plus

                                                                         
Query: 470   ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529
             ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || 
Sbjct: 43446 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 43505

                                                                
Query: 530   acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579
             ||||| ||||| ||||| || |||| | ||||| ||||| |||||||||||
Sbjct: 43506 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 43555



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>emb|X69374.1|ATSLP A.thaliana mRNA for suppressor-like protein
          Length = 1109

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 92/111 (82%), Gaps = 2/111 (1%)
 Strand = Plus / Minus

                                                                       
Query: 470 ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529
           ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || 
Sbjct: 842 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 783

                                                              
Query: 530 acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579
           ||||| ||||| ||||| || |||| | ||||| ||||| |||||||||||
Sbjct: 782 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 733



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>gb|U40218.1|ATUERF12 Arabidopsis thaliana eukaryotic release factor 1 homolog (eRF1)
           mRNA, partial cds
          Length = 661

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 92/111 (82%), Gaps = 2/111 (1%)
 Strand = Plus / Minus

                                                                       
Query: 470 ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529
           ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || 
Sbjct: 353 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 294

                                                              
Query: 530 acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579
           ||||| ||||| ||||| || |||| | ||||| ||||| |||||||||||
Sbjct: 293 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 244



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>gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete sequence
          Length = 124563

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                         
Query: 455   agctgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcc 514
             ||||| || ||||| || ||||| || |||||||| ||| | || || ||||| || || 
Sbjct: 15033 agctggtaacgcagcatcccacctatcccaccaaagcctttgcaaaattgtgaaccttct 14974

                                                                         
Query: 515   tgagatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaac 574
             || ||||| ||||| ||||  ||||| ||||| |||||||  ||||||||||| ||||||
Sbjct: 14973 tgcgatttgttggtgacaatctcaagagtgcaaccaaactgtttgtattcatttgcaaac 14914

               
Query: 575   ca 576
             ||
Sbjct: 14913 ca 14912



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>ref|NM_001028936.1| Caenorhabditis elegans T05H4.6 (T05H4.6) mRNA, complete cds
          Length = 1982

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 554  ttcttgtattcattagcaaaccattccaaaagtg 587
            |||||||| | |||||||||||||||||||||||
Sbjct: 1204 ttcttgtagttattagcaaaccattccaaaagtg 1171



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>gb|AF016452.1| Caenorhabditis elegans cosmid T05H4, complete sequence
          Length = 45438

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 556   cttgtattcattagcaaaccattccaaaagtg 587
             |||||| | |||||||||||||||||||||||
Sbjct: 25309 cttgtagttattagcaaaccattccaaaagtg 25278



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>ref|NM_113022.3| Arabidopsis thaliana ADOF2; DNA binding / transcription factor
           AT3G21270 (ADOF2) mRNA, complete cds
          Length = 1078

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 ttttgatagaggaattgtgg 245
           ||||||||||||||||||||
Sbjct: 121 ttttgatagaggaattgtgg 102



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>gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosome 18, complete
             sequence
          Length = 178519

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   taagaggcaacaaaaggttc 182
             ||||||||||||||||||||
Sbjct: 68741 taagaggcaacaaaaggttc 68760



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>gb|AY045847.1| Arabidopsis thaliana putative Dof zinc finger protein (At3g21270)
           mRNA, complete cds
          Length = 1060

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 ttttgatagaggaattgtgg 245
           ||||||||||||||||||||
Sbjct: 91  ttttgatagaggaattgtgg 72



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>gb|AC113152.4| Homo sapiens BAC clone RP11-245L10 from 4, complete sequence
          Length = 109659

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 520   tttattggtaacaaattcaa 539
             ||||||||||||||||||||
Sbjct: 87620 tttattggtaacaaattcaa 87601



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>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete
             sequence
          Length = 152172

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 548   ccaaacttcttgtattcatt 567
             ||||||||||||||||||||
Sbjct: 71590 ccaaacttcttgtattcatt 71571



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>gb|AC023781.5| Homo sapiens chromosome 8, clone RP11-149P24, complete sequence
          Length = 147607

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    tgcttcaggcatgtgattga 386
              ||||||||||||||||||||
Sbjct: 139886 tgcttcaggcatgtgattga 139867



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>gb|AY444799.1| HIV-1 isolate 99US.MSC4068 from USA gag protein (gag) and pol protein
            (pol) genes, partial cds; vif protein (vif), vpr protein
            (vpr), tat protein (tat), rev protein (rev), vpu protein
            (vpu), and envelope glycoprotein (env) genes, complete
            cds; and nef protein (nef) gene, partial cds
          Length = 8454

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 470  ataccaccaatgccaccaaa 489
            ||||||||||||||||||||
Sbjct: 5850 ataccaccaatgccaccaaa 5869



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 548      ccaaacttcttgtattcatt 567
                ||||||||||||||||||||
Sbjct: 19304791 ccaaacttcttgtattcatt 19304810



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 488     aaccctctacagaactgtgatccc 511
               |||||||| |||||||||||||||
Sbjct: 3512815 aaccctctccagaactgtgatccc 3512792



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>emb|BX826242.1|CNS0A501 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL93ZF07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1081

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 ttttgatagaggaattgtgg 245
           ||||||||||||||||||||
Sbjct: 119 ttttgatagaggaattgtgg 100



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>gb|AC106053.6| Homo sapiens BAC clone RP11-818B6 from 2, complete sequence
          Length = 178810

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 567  tagcaaaccattccaaaagt 586
            ||||||||||||||||||||
Sbjct: 4146 tagcaaaccattccaaaagt 4165



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>gb|AC013467.8| Homo sapiens BAC clone RP11-451F14 from 2, complete sequence
          Length = 172966

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 567    tagcaaaccattccaaaagt 586
              ||||||||||||||||||||
Sbjct: 109762 tagcaaaccattccaaaagt 109743



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>gb|AC010137.3|AC010137 Homo sapiens BAC clone RP11-169D1 from Y, complete sequence
          Length = 123701

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     caacaataataagtacctta 26
             ||||||||||||||||||||
Sbjct: 52074 caacaataataagtacctta 52055



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>gb|AF404348.1| Uncultured Geobacter sp. clone NS1 16S ribosomal RNA gene, partial
           sequence
          Length = 1520

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gatttaggataacatctcga 221
           ||||||||||||||||||||
Sbjct: 127 gatttaggataacatctcga 146



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>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0675A05
          Length = 131972

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 488  aaccctctacagaactgtgatccc 511
            |||||||| |||||||||||||||
Sbjct: 4652 aaccctctccagaactgtgatccc 4629



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>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome
          Length = 1358633

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 549     caaacttcttgtattcatta 568
               ||||||||||||||||||||
Sbjct: 1077918 caaacttcttgtattcatta 1077937



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>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0033B09
          Length = 143545

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 488    aaccctctacagaactgtgatccc 511
              |||||||| |||||||||||||||
Sbjct: 129519 aaccctctccagaactgtgatccc 129496



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>emb|BX539342.9| Mouse DNA sequence from clone RP24-67F19 on chromosome 7, complete
              sequence
          Length = 155752

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 482    ccaccaaaccctctacagaa 501
              ||||||||||||||||||||
Sbjct: 124681 ccaccaaaccctctacagaa 124662



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>dbj|BS000090.1| Pan troglodytes chromosome 22 clone:PTB-057C10, map 22, complete
             sequences
          Length = 158351

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   attggcaaaataagaggcaa 172
             ||||||||||||||||||||
Sbjct: 16471 attggcaaaataagaggcaa 16490



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>dbj|BS000089.1| Pan troglodytes chromosome 22 clone:PTB-054B14, map 22, complete
             sequences
          Length = 139076

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   attggcaaaataagaggcaa 172
             ||||||||||||||||||||
Sbjct: 87128 attggcaaaataagaggcaa 87147



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>dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXL8
          Length = 85599

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   ttttgatagaggaattgtgg 245
             ||||||||||||||||||||
Sbjct: 56607 ttttgatagaggaattgtgg 56588



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>dbj|AP001688.1| Homo sapiens genomic DNA, chromosome 21q, section 32/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    attggcaaaataagaggcaa 172
              ||||||||||||||||||||
Sbjct: 201158 attggcaaaataagaggcaa 201177



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 548      ccaaacttcttgtattcatt 567
                ||||||||||||||||||||
Sbjct: 19316067 ccaaacttcttgtattcatt 19316086



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>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    tcatcgtcatcaagatcatc 438
              ||||||||||||||||||||
Sbjct: 257823 tcatcgtcatcaagatcatc 257804



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>gb|AC122432.4| Mus musculus BAC clone RP24-187F8 from 7, complete sequence
          Length = 163515

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 482   ccaccaaaccctctacagaa 501
             ||||||||||||||||||||
Sbjct: 99784 ccaccaaaccctctacagaa 99803



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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    attcattagcaaaccattcc 580
              ||||||||||||||||||||
Sbjct: 394181 attcattagcaaaccattcc 394162



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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    attcattagcaaaccattcc 580
              ||||||||||||||||||||
Sbjct: 394179 attcattagcaaaccattcc 394160



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>dbj|AP006415.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT37I11, TM0302a,
             complete sequence
          Length = 96704

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    taagtaccttacaacaactc 35
             ||||||||||||||||||||
Sbjct: 84397 taagtaccttacaacaactc 84416



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>dbj|AB017565.1| Arabidopsis thaliana adof2 mRNA for Dof zinc finger protein,
           complete cds
          Length = 1034

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 ttttgatagaggaattgtgg 245
           ||||||||||||||||||||
Sbjct: 78  ttttgatagaggaattgtgg 59



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>dbj|AP000961.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B811H6, LL56-APP
              region, complete sequence
          Length = 165860

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    attggcaaaataagaggcaa 172
              ||||||||||||||||||||
Sbjct: 134791 attggcaaaataagaggcaa 134810


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,734,312
Number of Sequences: 3902068
Number of extensions: 4734312
Number of successful extensions: 86523
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86179
Number of HSP's gapped (non-prelim): 335
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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