Clone Name | rbah63f18 |
---|---|
Clone Library Name | barley_pub |
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 182 bits (92), Expect = 9e-43 Identities = 173/200 (86%) Strand = Plus / Minus Query: 398 tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457 ||||| ||||||||||||||||| || ||| ||| |||||||| ||||| ||||||| Sbjct: 118481 tcagagtcttcatagacaccctcgtcatcagaaagctcatcaaaagaacggatgtccaat 118422 Query: 458 tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517 |||||||||| || ||||||||||||||||| ||||| || ||||| ||||| || ||| Sbjct: 118421 tgatagcgcaacatgccaccaatgccaccaaatcctctgcaaaactgagatccttcttga 118362 Query: 518 gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577 || || ||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 118361 gacttgttggtaacaaattcaagtgtgcacccaaactttttgtactcattggcaaaccat 118302 Query: 578 tccaaaagtgaggtcttctc 597 ||||| |||||||| ||||| Sbjct: 118301 tccaagagtgaggttttctc 118282
>ref|XM_478927.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1840 Score = 170 bits (86), Expect = 3e-39 Identities = 176/206 (85%) Strand = Plus / Minus Query: 376 catgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaagatc 435 |||||||||| || |||||| ||||| |||||||| | |||||||||||| ||| || Sbjct: 1469 catgtgattggctgattgctaatcagagtcttcatacaatccctcatcgtcagaaagctc 1410 Query: 436 atcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccctct 495 |||||| || || || || ||||| || |||| |||||||||||||||||| || ||||| Sbjct: 1409 atcaaatgaccggatatctagctggtaacgcaagataccaccaatgccaccgaatcctct 1350 Query: 496 acagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaactt 555 ||| ||||| |||||||| ||||||||||| || ||||| ||||| | ||| |||||||| Sbjct: 1349 acaaaactgagatccctcttgagatttattagtgacaaactcaagcgagcaaccaaactt 1290 Query: 556 cttgtattcattagcaaaccattcca 581 |||||||||||||||||||||||||| Sbjct: 1289 cttgtattcattagcaaaccattcca 1264
>gb|BT018866.1| Zea mays clone EL01N0561B12.d mRNA sequence Length = 1947 Score = 170 bits (86), Expect = 3e-39 Identities = 179/210 (85%) Strand = Plus / Minus Query: 372 caggcatgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaa 431 |||||||| ||||| || |||||||||||| |||||||| ||| | ||||| ||| || Sbjct: 1457 caggcatgagattggctgattgctagtcagagtcttcatacacatcgtcatcatcagaaa 1398 Query: 432 gatcatcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaacc 491 | |||||||| ||||| || |||||||| ||||||| || ||||||||||||||||| | Sbjct: 1397 gctcatcaaaagaacggatatccagctggtagcgcaacatgccaccaatgccaccaaatc 1338 Query: 492 ctctacagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaa 551 ||||||||||||| |||||||||||||| || ||||| ||||| || | | ||| |||| Sbjct: 1337 ctctacagaactgggatccctcctgagacttgttggtcacaaactccaacgagcaaccaa 1278 Query: 552 acttcttgtattcattagcaaaccattcca 581 |||||||||||||||| ||||||||||||| Sbjct: 1277 acttcttgtattcattggcaaaccattcca 1248
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 170 bits (86), Expect = 3e-39 Identities = 176/206 (85%) Strand = Plus / Plus Query: 376 catgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaagatc 435 |||||||||| || |||||| ||||| |||||||| | |||||||||||| ||| || Sbjct: 23851834 catgtgattggctgattgctaatcagagtcttcatacaatccctcatcgtcagaaagctc 23851893 Query: 436 atcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccctct 495 |||||| || || || || ||||| || |||| |||||||||||||||||| || ||||| Sbjct: 23851894 atcaaatgaccggatatctagctggtaacgcaagataccaccaatgccaccgaatcctct 23851953 Query: 496 acagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaactt 555 ||| ||||| |||||||| ||||||||||| || ||||| ||||| | ||| |||||||| Sbjct: 23851954 acaaaactgagatccctcttgagatttattagtgacaaactcaagcgagcaaccaaactt 23852013 Query: 556 cttgtattcattagcaaaccattcca 581 |||||||||||||||||||||||||| Sbjct: 23852014 cttgtattcattagcaaaccattcca 23852039
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 170 bits (86), Expect = 3e-39 Identities = 176/206 (85%) Strand = Plus / Plus Query: 376 catgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaagatc 435 |||||||||| || |||||| ||||| |||||||| | |||||||||||| ||| || Sbjct: 6761 catgtgattggctgattgctaatcagagtcttcatacaatccctcatcgtcagaaagctc 6820 Query: 436 atcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccctct 495 |||||| || || || || ||||| || |||| |||||||||||||||||| || ||||| Sbjct: 6821 atcaaatgaccggatatctagctggtaacgcaagataccaccaatgccaccgaatcctct 6880 Query: 496 acagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaactt 555 ||| ||||| |||||||| ||||||||||| || ||||| ||||| | ||| |||||||| Sbjct: 6881 acaaaactgagatccctcttgagatttattagtgacaaactcaagcgagcaaccaaactt 6940 Query: 556 cttgtattcattagcaaaccattcca 581 |||||||||||||||||||||||||| Sbjct: 6941 cttgtattcattagcaaaccattcca 6966
>dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_C01 Length = 97427 Score = 170 bits (86), Expect = 3e-39 Identities = 176/206 (85%) Strand = Plus / Plus Query: 376 catgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaagatc 435 |||||||||| || |||||| ||||| |||||||| | |||||||||||| ||| || Sbjct: 40334 catgtgattggctgattgctaatcagagtcttcatacaatccctcatcgtcagaaagctc 40393 Query: 436 atcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccctct 495 |||||| || || || || ||||| || |||| |||||||||||||||||| || ||||| Sbjct: 40394 atcaaatgaccggatatctagctggtaacgcaagataccaccaatgccaccgaatcctct 40453 Query: 496 acagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaactt 555 ||| ||||| |||||||| ||||||||||| || ||||| ||||| | ||| |||||||| Sbjct: 40454 acaaaactgagatccctcttgagatttattagtgacaaactcaagcgagcaaccaaactt 40513 Query: 556 cttgtattcattagcaaaccattcca 581 |||||||||||||||||||||||||| Sbjct: 40514 cttgtattcattagcaaaccattcca 40539
>dbj|AK103740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138K20, full insert sequence Length = 1840 Score = 170 bits (86), Expect = 3e-39 Identities = 176/206 (85%) Strand = Plus / Minus Query: 376 catgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaagatc 435 |||||||||| || |||||| ||||| |||||||| | |||||||||||| ||| || Sbjct: 1469 catgtgattggctgattgctaatcagagtcttcatacaatccctcatcgtcagaaagctc 1410 Query: 436 atcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccctct 495 |||||| || || || || ||||| || |||| |||||||||||||||||| || ||||| Sbjct: 1409 atcaaatgaccggatatctagctggtaacgcaagataccaccaatgccaccgaatcctct 1350 Query: 496 acagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaactt 555 ||| ||||| |||||||| ||||||||||| || ||||| ||||| | ||| |||||||| Sbjct: 1349 acaaaactgagatccctcttgagatttattagtgacaaactcaagcgagcaaccaaactt 1290 Query: 556 cttgtattcattagcaaaccattcca 581 |||||||||||||||||||||||||| Sbjct: 1289 cttgtattcattagcaaaccattcca 1264
>ref|XM_469434.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1713 Score = 167 bits (84), Expect = 5e-38 Identities = 159/184 (86%) Strand = Plus / Minus Query: 398 tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457 ||||| ||||||||||| |||||||| ||| ||| |||||||| ||||||||||||||| Sbjct: 1466 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 1407 Query: 458 tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517 |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 1406 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 1347 Query: 518 gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577 ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct: 1346 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 1287 Query: 578 tcca 581 |||| Sbjct: 1286 tcca 1283
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 167 bits (84), Expect = 5e-38 Identities = 159/184 (86%) Strand = Plus / Minus Query: 398 tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457 ||||| ||||||||||| |||||||| ||| ||| |||||||| ||||||||||||||| Sbjct: 79892 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 79833 Query: 458 tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517 |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 79832 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 79773 Query: 518 gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577 ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct: 79772 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 79713 Query: 578 tcca 581 |||| Sbjct: 79712 tcca 79709
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 167 bits (84), Expect = 5e-38 Identities = 159/184 (86%) Strand = Plus / Minus Query: 398 tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457 ||||| ||||||||||| |||||||| ||| ||| |||||||| ||||||||||||||| Sbjct: 27944164 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 27944105 Query: 458 tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517 |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 27944104 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 27944045 Query: 518 gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577 ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct: 27944044 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 27943985 Query: 578 tcca 581 |||| Sbjct: 27943984 tcca 27943981
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 167 bits (84), Expect = 5e-38 Identities = 159/184 (86%) Strand = Plus / Plus Query: 398 tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457 ||||| ||||||||||| |||||||| ||| ||| |||||||| ||||||||||||||| Sbjct: 80862 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 80921 Query: 458 tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517 |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 80922 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 80981 Query: 518 gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577 ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct: 80982 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 81041 Query: 578 tcca 581 |||| Sbjct: 81042 tcca 81045
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 167 bits (84), Expect = 5e-38 Identities = 159/184 (86%) Strand = Plus / Minus Query: 398 tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457 ||||| ||||||||||| |||||||| ||| ||| |||||||| ||||||||||||||| Sbjct: 28035488 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 28035429 Query: 458 tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517 |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 28035428 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 28035369 Query: 518 gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577 ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct: 28035368 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 28035309 Query: 578 tcca 581 |||| Sbjct: 28035308 tcca 28035305
>dbj|AK121869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103O08, full insert sequence Length = 1714 Score = 167 bits (84), Expect = 5e-38 Identities = 159/184 (86%) Strand = Plus / Minus Query: 398 tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457 ||||| ||||||||||| |||||||| ||| ||| |||||||| ||||||||||||||| Sbjct: 1467 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 1408 Query: 458 tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517 |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 1407 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 1348 Query: 518 gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577 ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct: 1347 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 1288 Query: 578 tcca 581 |||| Sbjct: 1287 tcca 1284
>dbj|AK102687.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102O11, full insert sequence Length = 1678 Score = 167 bits (84), Expect = 5e-38 Identities = 159/184 (86%) Strand = Plus / Minus Query: 398 tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457 ||||| ||||||||||| |||||||| ||| ||| |||||||| ||||||||||||||| Sbjct: 1424 tcagagtcttcatagacgccctcatcatcagaaagctcatcaaaagaacgaatgtccagc 1365 Query: 458 tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517 |||||||||| ||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 1364 tgatagcgcaagatgccaccgatgccaccaaaacctctgcaaaactgtgacccctcctgg 1305 Query: 518 gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577 ||||| |||||||| || ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct: 1304 gatttgttggtaacgaactcaagtgtgcatccgaactttttgtactcgttagcaaaccac 1245 Query: 578 tcca 581 |||| Sbjct: 1244 tcca 1241
>dbj|AK065768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043M02, full insert sequence Length = 1187 Score = 157 bits (79), Expect = 5e-35 Identities = 176/207 (85%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 376 catgtgattgattggttgctagtcagaatcttcatagacaccctcatcgtcatcaagatc 435 |||||||||| || |||||| ||||| |||||||| | |||||||||||| ||| || Sbjct: 816 catgtgattggctgattgctaatcagagtcttcatacaatccctcatcgtcagaaagctc 757 Query: 436 atcaaaggaacgaatgtccagctgatag-cgcaggataccaccaatgccaccaaaccctc 494 |||||| || || || || ||||| || |||| |||||||||||||||||| || |||| Sbjct: 756 atcaaatgaccggatatctagctggtaaacgcaagataccaccaatgccaccgaatcctc 697 Query: 495 tacagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaact 554 |||| ||||| |||||||| ||||||||||| || ||||| ||||| | ||| ||||||| Sbjct: 696 tacaaaactgagatccctcttgagatttattagtgacaaactcaagcgagcaaccaaact 637 Query: 555 tcttgtattcattagcaaaccattcca 581 ||||||||||||||||||||||||||| Sbjct: 636 tcttgtattcattagcaaaccattcca 610
>gb|BT018379.1| Zea mays clone EL01N0307H02.d mRNA sequence Length = 1459 Score = 129 bits (65), Expect = 1e-26 Identities = 155/185 (83%) Strand = Plus / Minus Query: 398 tcagaatcttcatagacaccctcatcgtcatcaagatcatcaaaggaacgaatgtccagc 457 ||||||| ||||||||| || || || ||| ||| || || || ||||| |||||||| Sbjct: 1182 tcagaattttcatagaccccttcgtcatcaaaaagctcgtcgaaagaacggatgtccagt 1123 Query: 458 tgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctga 517 |||||||||| || ||||||||||||||||| ||||| || ||||| || || || ||| Sbjct: 1122 tgatagcgcaacatgccaccaatgccaccaaatcctctgcaaaactgagacccttcttga 1063 Query: 518 gatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaaccat 577 ||||| ||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||| Sbjct: 1062 gatttgttggtaacaaactcaagtgtgcacccaaattttttgtactcattggcaaaccat 1003 Query: 578 tccaa 582 ||||| Sbjct: 1002 tccaa 998
>gb|DQ241835.1| Solanum tuberosum clone 180C08 eukaryotic peptide chain release factor subunit 1-3-like mRNA, complete cds Length = 1614 Score = 97.6 bits (49), Expect = 4e-17 Identities = 124/149 (83%) Strand = Plus / Minus Query: 434 tcatcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccct 493 |||||||||||||| ||||| ||||| ||||| ||||| || |||||||||||||| ||| Sbjct: 1339 tcatcaaaggaacgcatgtcaagctggtagcgaaggattcctccaatgccaccaaatcct 1280 Query: 494 ctacagaactgtgatccctcctgagatttattggtaacaaattcaagggtgcacccaaac 553 || ||||||||||| ||||| ||||| | || || ||||| ||||| | || ||||| Sbjct: 1279 ctgcagaactgtgacccctcttgagacctgttagtgacaaactcaagtgaacaaccaaaa 1220 Query: 554 ttcttgtattcattagcaaaccattccaa 582 | ||||||||||| |||||||| ||||| Sbjct: 1219 gttttgtattcattggcaaaccactccaa 1191
>gb|DQ294253.1| Solanum tuberosum clone 069E03 eukaryotic peptide chain release factor subunit 1-3-like protein mRNA, complete cds Length = 1638 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 434 tcatcaaaggaacgaatgtccagctgatagcgcaggataccaccaatgccaccaaaccct 493 |||||||||||||| ||||| ||||| ||||| ||||| || |||||||||||||| ||| Sbjct: 1346 tcatcaaaggaacgcatgtcaagctggtagcgaaggattcctccaatgccaccaaatcct 1287 Query: 494 ctacagaactgtgatccctcctgaga 519 || ||||||||||| ||||| ||||| Sbjct: 1286 ctgcagaactgtgacccctcttgaga 1261
>gb|AC136505.41| Medicago truncatula clone mth2-24f15, complete sequence Length = 122801 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 455 agctgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcc 514 ||||| ||||| || ||||| ||||| |||||||||||||| || |||||||| || || Sbjct: 50520 agctggtagcgaagcatacctccaataccaccaaaccctctgcaaaactgtgacccttct 50579 Query: 515 tgagatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaac 574 |||||||| ||||| || ||||| || | ||| ||||| | ||||| ||||| |||||| Sbjct: 50580 tgagatttgttggtcacgaattccagcgagcatccaaatcttttgtactcattcgcaaac 50639 Query: 575 ca 576 || Sbjct: 50640 ca 50641
>ref|XM_475154.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1323 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 461 tagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagat 520 ||||||||||| ||||| || |||||||| || | |||||||||||||| ||||| || Sbjct: 1247 tagcgcaggatcccaccgatcccaccaaagccacggcagaactgtgatccttcctgcgac 1188 Query: 521 ttattggtaacaaattcaagggtgca 546 || ||||| ||||| || |||||||| Sbjct: 1187 ttgttggtgacaaactccagggtgca 1162
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 461 tagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagat 520 ||||||||||| ||||| || |||||||| || | |||||||||||||| ||||| || Sbjct: 135369 tagcgcaggatcccaccgatcccaccaaagccacggcagaactgtgatccttcctgcgac 135310 Query: 521 ttattggtaacaaattcaagggtgca 546 || ||||| ||||| || |||||||| Sbjct: 135309 ttgttggtgacaaactccagggtgca 135284
>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12, complete sequence Length = 121293 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 461 tagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagat 520 ||||||||||| ||||| || |||||||| || | |||||||||||||| ||||| || Sbjct: 6164 tagcgcaggatcccaccgatcccaccaaagccacggcagaactgtgatccttcctgcgac 6105 Query: 521 ttattggtaacaaattcaagggtgca 546 || ||||| ||||| || |||||||| Sbjct: 6104 ttgttggtgacaaactccagggtgca 6079
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 461 tagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagat 520 ||||||||||| ||||| || |||||||| || | |||||||||||||| ||||| || Sbjct: 17875415 tagcgcaggatcccaccgatcccaccaaagccacggcagaactgtgatccttcctgcgac 17875356 Query: 521 ttattggtaacaaattcaagggtgca 546 || ||||| ||||| || |||||||| Sbjct: 17875355 ttgttggtgacaaactccagggtgca 17875330
>dbj|AK064587.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-G01, full insert sequence Length = 1973 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 461 tagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagat 520 ||||||||||| ||||| || |||||||| || | |||||||||||||| ||||| || Sbjct: 1366 tagcgcaggatcccaccgatcccaccaaagccacggcagaactgtgatccttcctgcgac 1307 Query: 521 ttattggtaacaaattcaagggtgca 546 || ||||| ||||| || |||||||| Sbjct: 1306 ttgttggtgacaaactccagggtgca 1281
>ref|NM_101163.1| Arabidopsis thaliana ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2); translation release factor/ translation release factor, codon specific AT1G12920 (ERF1-2) mRNA, complete cds Length = 1613 Score = 54.0 bits (27), Expect = 5e-04 Identities = 92/111 (82%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 470 ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529 ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || Sbjct: 1333 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 1274 Query: 530 acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579 ||||| ||||| ||||| || |||| | ||||| ||||| ||||||||||| Sbjct: 1273 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 1224
>gb|AY034963.1| Arabidopsis thaliana putative eukaryotic peptide chain release factor subunit 1 (At1g12920) mRNA, complete cds Length = 1634 Score = 54.0 bits (27), Expect = 5e-04 Identities = 92/111 (82%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 470 ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529 ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || Sbjct: 1329 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 1270 Query: 530 acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579 ||||| ||||| ||||| || |||| | ||||| ||||| ||||||||||| Sbjct: 1269 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 1220
>emb|BX815774.1|CNS0AAVC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1553 Score = 54.0 bits (27), Expect = 5e-04 Identities = 92/111 (82%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 470 ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529 ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || Sbjct: 1316 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 1257 Query: 530 acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579 ||||| ||||| ||||| || |||| | ||||| ||||| ||||||||||| Sbjct: 1256 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 1207
>gb|AY086623.1| Arabidopsis thaliana clone 26360 mRNA, complete sequence Length = 1613 Score = 54.0 bits (27), Expect = 5e-04 Identities = 92/111 (82%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 470 ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529 ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || Sbjct: 1333 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 1274 Query: 530 acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579 ||||| ||||| ||||| || |||| | ||||| ||||| ||||||||||| Sbjct: 1273 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 1224
>gb|AC012187.3|F13K23 Sequence of BAC F13K23 from Arabidopsis thaliana chromosome 1, complete sequence Length = 74328 Score = 54.0 bits (27), Expect = 5e-04 Identities = 92/111 (82%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 470 ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529 ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || Sbjct: 43446 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 43505 Query: 530 acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579 ||||| ||||| ||||| || |||| | ||||| ||||| ||||||||||| Sbjct: 43506 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 43555
>emb|X69374.1|ATSLP A.thaliana mRNA for suppressor-like protein Length = 1109 Score = 54.0 bits (27), Expect = 5e-04 Identities = 92/111 (82%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 470 ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529 ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || Sbjct: 842 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 783 Query: 530 acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579 ||||| ||||| ||||| || |||| | ||||| ||||| ||||||||||| Sbjct: 782 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 733
>gb|U40218.1|ATUERF12 Arabidopsis thaliana eukaryotic release factor 1 homolog (eRF1) mRNA, partial cds Length = 661 Score = 54.0 bits (27), Expect = 5e-04 Identities = 92/111 (82%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 470 ataccaccaatgccaccaaaccctctacagaactgtgatccctcctgagatttattggta 529 ||||||||||| |||||||| ||||| || |||||||| || || || ||||| || || Sbjct: 353 ataccaccaatcccaccaaaacctctgcaaaactgtgacccttcttgggatttgttagtc 294 Query: 530 acaaattcaagggtgca-cccaaacttcttgtattcattagcaaaccattc 579 ||||| ||||| ||||| || |||| | ||||| ||||| ||||||||||| Sbjct: 293 acaaactcaagagtgcagccgaaacgt-ttgtactcatttgcaaaccattc 244
>gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete sequence Length = 124563 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Minus Query: 455 agctgatagcgcaggataccaccaatgccaccaaaccctctacagaactgtgatccctcc 514 ||||| || ||||| || ||||| || |||||||| ||| | || || ||||| || || Sbjct: 15033 agctggtaacgcagcatcccacctatcccaccaaagcctttgcaaaattgtgaaccttct 14974 Query: 515 tgagatttattggtaacaaattcaagggtgcacccaaacttcttgtattcattagcaaac 574 || ||||| ||||| |||| ||||| ||||| ||||||| ||||||||||| |||||| Sbjct: 14973 tgcgatttgttggtgacaatctcaagagtgcaaccaaactgtttgtattcatttgcaaac 14914 Query: 575 ca 576 || Sbjct: 14913 ca 14912
>ref|NM_001028936.1| Caenorhabditis elegans T05H4.6 (T05H4.6) mRNA, complete cds Length = 1982 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 554 ttcttgtattcattagcaaaccattccaaaagtg 587 |||||||| | ||||||||||||||||||||||| Sbjct: 1204 ttcttgtagttattagcaaaccattccaaaagtg 1171
>gb|AF016452.1| Caenorhabditis elegans cosmid T05H4, complete sequence Length = 45438 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 556 cttgtattcattagcaaaccattccaaaagtg 587 |||||| | ||||||||||||||||||||||| Sbjct: 25309 cttgtagttattagcaaaccattccaaaagtg 25278
>ref|NM_113022.3| Arabidopsis thaliana ADOF2; DNA binding / transcription factor AT3G21270 (ADOF2) mRNA, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ttttgatagaggaattgtgg 245 |||||||||||||||||||| Sbjct: 121 ttttgatagaggaattgtgg 102
>gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosome 18, complete sequence Length = 178519 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 taagaggcaacaaaaggttc 182 |||||||||||||||||||| Sbjct: 68741 taagaggcaacaaaaggttc 68760
>gb|AY045847.1| Arabidopsis thaliana putative Dof zinc finger protein (At3g21270) mRNA, complete cds Length = 1060 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ttttgatagaggaattgtgg 245 |||||||||||||||||||| Sbjct: 91 ttttgatagaggaattgtgg 72
>gb|AC113152.4| Homo sapiens BAC clone RP11-245L10 from 4, complete sequence Length = 109659 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tttattggtaacaaattcaa 539 |||||||||||||||||||| Sbjct: 87620 tttattggtaacaaattcaa 87601
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 ccaaacttcttgtattcatt 567 |||||||||||||||||||| Sbjct: 71590 ccaaacttcttgtattcatt 71571
>gb|AC023781.5| Homo sapiens chromosome 8, clone RP11-149P24, complete sequence Length = 147607 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tgcttcaggcatgtgattga 386 |||||||||||||||||||| Sbjct: 139886 tgcttcaggcatgtgattga 139867
>gb|AY444799.1| HIV-1 isolate 99US.MSC4068 from USA gag protein (gag) and pol protein (pol) genes, partial cds; vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), and envelope glycoprotein (env) genes, complete cds; and nef protein (nef) gene, partial cds Length = 8454 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 ataccaccaatgccaccaaa 489 |||||||||||||||||||| Sbjct: 5850 ataccaccaatgccaccaaa 5869
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaaacttcttgtattcatt 567 |||||||||||||||||||| Sbjct: 19304791 ccaaacttcttgtattcatt 19304810
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 aaccctctacagaactgtgatccc 511 |||||||| ||||||||||||||| Sbjct: 3512815 aaccctctccagaactgtgatccc 3512792
>emb|BX826242.1|CNS0A501 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL93ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1081 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ttttgatagaggaattgtgg 245 |||||||||||||||||||| Sbjct: 119 ttttgatagaggaattgtgg 100
>gb|AC106053.6| Homo sapiens BAC clone RP11-818B6 from 2, complete sequence Length = 178810 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 tagcaaaccattccaaaagt 586 |||||||||||||||||||| Sbjct: 4146 tagcaaaccattccaaaagt 4165
>gb|AC013467.8| Homo sapiens BAC clone RP11-451F14 from 2, complete sequence Length = 172966 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 tagcaaaccattccaaaagt 586 |||||||||||||||||||| Sbjct: 109762 tagcaaaccattccaaaagt 109743
>gb|AC010137.3|AC010137 Homo sapiens BAC clone RP11-169D1 from Y, complete sequence Length = 123701 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 caacaataataagtacctta 26 |||||||||||||||||||| Sbjct: 52074 caacaataataagtacctta 52055
>gb|AF404348.1| Uncultured Geobacter sp. clone NS1 16S ribosomal RNA gene, partial sequence Length = 1520 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gatttaggataacatctcga 221 |||||||||||||||||||| Sbjct: 127 gatttaggataacatctcga 146
>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0675A05 Length = 131972 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 aaccctctacagaactgtgatccc 511 |||||||| ||||||||||||||| Sbjct: 4652 aaccctctccagaactgtgatccc 4629
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 caaacttcttgtattcatta 568 |||||||||||||||||||| Sbjct: 1077918 caaacttcttgtattcatta 1077937
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 aaccctctacagaactgtgatccc 511 |||||||| ||||||||||||||| Sbjct: 129519 aaccctctccagaactgtgatccc 129496
>emb|BX539342.9| Mouse DNA sequence from clone RP24-67F19 on chromosome 7, complete sequence Length = 155752 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 ccaccaaaccctctacagaa 501 |||||||||||||||||||| Sbjct: 124681 ccaccaaaccctctacagaa 124662
>dbj|BS000090.1| Pan troglodytes chromosome 22 clone:PTB-057C10, map 22, complete sequences Length = 158351 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 attggcaaaataagaggcaa 172 |||||||||||||||||||| Sbjct: 16471 attggcaaaataagaggcaa 16490
>dbj|BS000089.1| Pan troglodytes chromosome 22 clone:PTB-054B14, map 22, complete sequences Length = 139076 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 attggcaaaataagaggcaa 172 |||||||||||||||||||| Sbjct: 87128 attggcaaaataagaggcaa 87147
>dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXL8 Length = 85599 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ttttgatagaggaattgtgg 245 |||||||||||||||||||| Sbjct: 56607 ttttgatagaggaattgtgg 56588
>dbj|AP001688.1| Homo sapiens genomic DNA, chromosome 21q, section 32/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 attggcaaaataagaggcaa 172 |||||||||||||||||||| Sbjct: 201158 attggcaaaataagaggcaa 201177
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ccaaacttcttgtattcatt 567 |||||||||||||||||||| Sbjct: 19316067 ccaaacttcttgtattcatt 19316086
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 tcatcgtcatcaagatcatc 438 |||||||||||||||||||| Sbjct: 257823 tcatcgtcatcaagatcatc 257804
>gb|AC122432.4| Mus musculus BAC clone RP24-187F8 from 7, complete sequence Length = 163515 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 ccaccaaaccctctacagaa 501 |||||||||||||||||||| Sbjct: 99784 ccaccaaaccctctacagaa 99803
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 attcattagcaaaccattcc 580 |||||||||||||||||||| Sbjct: 394181 attcattagcaaaccattcc 394162
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 attcattagcaaaccattcc 580 |||||||||||||||||||| Sbjct: 394179 attcattagcaaaccattcc 394160
>dbj|AP006415.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT37I11, TM0302a, complete sequence Length = 96704 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 taagtaccttacaacaactc 35 |||||||||||||||||||| Sbjct: 84397 taagtaccttacaacaactc 84416
>dbj|AB017565.1| Arabidopsis thaliana adof2 mRNA for Dof zinc finger protein, complete cds Length = 1034 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ttttgatagaggaattgtgg 245 |||||||||||||||||||| Sbjct: 78 ttttgatagaggaattgtgg 59
>dbj|AP000961.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B811H6, LL56-APP region, complete sequence Length = 165860 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 attggcaaaataagaggcaa 172 |||||||||||||||||||| Sbjct: 134791 attggcaaaataagaggcaa 134810 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,734,312 Number of Sequences: 3902068 Number of extensions: 4734312 Number of successful extensions: 86523 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86179 Number of HSP's gapped (non-prelim): 335 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)