ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63e23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (E... 86 2e-17
2CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate... 67 1e-11
3CAHX_FLABR (P46511) Carbonic anhydrase (EC 4.2.1.1) (Carbonate d... 64 1e-10
4CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate... 64 1e-10
5CAHX_FLAPR (P46281) Carbonic anhydrase (EC 4.2.1.1) (Carbonate d... 64 1e-10
6CAHC_ARATH (P27140) Carbonic anhydrase, chloroplast precursor (E... 63 2e-10
7CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate d... 63 2e-10
8CAHC_TOBAC (P27141) Carbonic anhydrase, chloroplast precursor (E... 62 4e-10
9CAHC_PEA (P17067) Carbonic anhydrase, chloroplast precursor (EC ... 60 1e-09
10CAHC_SPIOL (P16016) Carbonic anhydrase, chloroplast precursor (E... 59 3e-09
11CAH2_FLALI (P46513) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate... 55 3e-08
12CYNT_HELPJ (Q9ZN54) Carbonic anhydrase (EC 4.2.1.1) 35 0.057
13ACCD_PICAB (O47039) Acetyl-coenzyme A carboxylase carboxyl trans... 34 0.075
14ACCD_PINTH (P52769) Acetyl-coenzyme A carboxylase carboxyl trans... 34 0.098
15CYNT_HELPY (O24855) Carbonic anhydrase 1 (EC 4.2.1.1) 32 0.49
16ACCD_CHLVU (P56293) Acetyl-coenzyme A carboxylase carboxyl trans... 30 1.4
17PYRC_METKA (Q8TXX9) Dihydroorotase (EC 3.5.2.3) (DHOase) 30 1.4
18ACCD_EPIVI (P30064) Acetyl-coenzyme A carboxylase carboxyl trans... 30 1.8
19I18BP_MOUSE (Q9Z0M9) Interleukin-18-binding protein precursor (I... 30 1.8
20LPQT_MYCTU (P96384) Putative lipoprotein lpqT precursor 29 3.2
21RPOZ_VIBPA (Q87TB0) DNA-directed RNA polymerase omega chain (EC ... 29 3.2
22ACCD_CUSRE (P31562) Acetyl-coenzyme A carboxylase carboxyl trans... 29 3.2
23KI2S1_HUMAN (Q14954) Killer cell immunoglobulin-like receptor 2D... 28 4.1
24RPOZ_VIBVY (Q7MPX0) DNA-directed RNA polymerase omega chain (EC ... 28 4.1
25RPOZ_VIBVU (Q8DDV5) DNA-directed RNA polymerase omega chain (EC ... 28 4.1
26KI2L1_HUMAN (P43626) Killer cell immunoglobulin-like receptor 2D... 28 4.1
27SCRA_LIMPO (Q25390) Alpha-scruin 28 5.4
28IF4B_YEAST (P34167) Eukaryotic translation initiation factor 4B ... 28 7.0
29VL1_HPV05 (P06917) Major capsid protein L1 28 7.0
30RDRP_CNV (P15187) Probable RNA-directed RNA polymerase (EC 2.7.7... 28 7.0
31PUT4_YEAST (P15380) Proline-specific permease 27 9.2
32LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related pr... 27 9.2
33SYT_DEIRA (Q9RSP3) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 27 9.2
34ACON_SCHPO (O13966) Aconitate hydratase, mitochondrial precursor... 27 9.2

>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)|
           (Carbonate dehydratase)
          Length = 324

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 40/42 (95%), Positives = 40/42 (95%)
 Frame = -3

Query: 378 VNVSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGKFETWEQ 253
           VNVSL NLLTYPFVKEGVTNGTLKLVGGHYD VSGKFETWEQ
Sbjct: 283 VNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWEQ 324



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>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase|
           2)
          Length = 259

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -3

Query: 378 VNVSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGKFETWE 256
           VNVSL NLLTYPFV+EGV  GTL L GG+YD V+G FE WE
Sbjct: 208 VNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWE 248



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>CAHX_FLABR (P46511) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)|
          Length = 330

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = -3

Query: 378 VNVSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGKFETW 259
           VNVSL NLLTYPFV++G+ N TL L GGHYD V+G FE W
Sbjct: 279 VNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELW 318



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>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase|
           1)
          Length = 330

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = -3

Query: 378 VNVSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGKFETW 259
           VNVSL NLLTYPFV++G+ N TL L GGHYD V+G FE W
Sbjct: 279 VNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELW 318



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>CAHX_FLAPR (P46281) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)|
          Length = 329

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = -3

Query: 378 VNVSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGKFETW 259
           VNVSL NLLTYPFV++G+ N TL L GGHYD V+G FE W
Sbjct: 278 VNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELW 317



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>CAHC_ARATH (P27140) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)|
           (Carbonate dehydratase)
          Length = 347

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = -3

Query: 378 VNVSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGKFETW 259
           VNVSL NLLTYPFV+EG+  GTL L GG+YD V G FE W
Sbjct: 285 VNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELW 324



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>CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)|
          Length = 330

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = -3

Query: 378 VNVSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGKFETW 259
           VNVSL NLLTYPFV++G+ N TL L GGHYD V+G FE W
Sbjct: 279 VNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELW 318



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>CAHC_TOBAC (P27141) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)|
           (Carbonate dehydratase)
          Length = 321

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = -3

Query: 378 VNVSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGKFETW 259
           VNVSL NLLTYPFV+EG+   TL L GGHYD V+G FE W
Sbjct: 270 VNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELW 309



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>CAHC_PEA (P17067) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)|
           (Carbonate dehydratase) [Contains: Carbonic anhydrase,
           27 kDa isoform; Carbonic anhydrase, 25 kDa isoform]
          Length = 328

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 27/40 (67%), Positives = 30/40 (75%)
 Frame = -3

Query: 378 VNVSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGKFETW 259
           VN SL NLLTYPFV+EG+ N TL L GG+YD V G FE W
Sbjct: 277 VNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELW 316



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>CAHC_SPIOL (P16016) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)|
           (Carbonate dehydratase)
          Length = 319

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = -3

Query: 378 VNVSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGKFETW 259
           VNVSL NLLTYPFV++G+   TL L GG+YD V+G FE W
Sbjct: 268 VNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELW 307



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>CAH2_FLALI (P46513) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase|
           2) (Fragment)
          Length = 190

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 24/40 (60%), Positives = 29/40 (72%)
 Frame = -3

Query: 378 VNVSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGKFETW 259
           VNVSL NLLTYPFV++ + N  L L G HYD V+G F+ W
Sbjct: 139 VNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLW 178



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>CYNT_HELPJ (Q9ZN54) Carbonic anhydrase (EC 4.2.1.1)|
          Length = 221

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -3

Query: 372 VSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGK 271
           + L NLL+Y F++E V N  LK+ G HY   +G+
Sbjct: 161 LQLNNLLSYDFIQERVINNELKIFGWHYIIETGR 194



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>ACCD_PICAB (O47039) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           beta (EC 6.4.1.2) (ACCase beta chain)
          Length = 319

 Score = 34.3 bits (77), Expect = 0.075
 Identities = 19/65 (29%), Positives = 33/65 (50%)
 Frame = +1

Query: 172 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDXVVVAADELEGSVGHTLLDERVG 351
           AL+  + D+ L+YV +  S  TGG   +   F + GD ++          G  ++D+ +G
Sbjct: 220 ALYIPQKDNRLLYVSILTSPTTGG---VTASFGMLGDIIIAEPKAYIAFAGKIVIDQTLG 276

Query: 352 QEVXE 366
           Q+V E
Sbjct: 277 QKVIE 281



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>ACCD_PINTH (P52769) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           beta (EC 6.4.1.2) (ACCase beta chain)
          Length = 321

 Score = 33.9 bits (76), Expect = 0.098
 Identities = 17/65 (26%), Positives = 33/65 (50%)
 Frame = +1

Query: 172 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDXVVVAADELEGSVGHTLLDERVG 351
           AL+ H+ +  L+Y+ +  S  TGG   +   F + GD ++          G  ++++ +G
Sbjct: 220 ALYIHQKEKKLLYISILTSPTTGG---VTASFGMLGDIIIAEPKAYIAFAGKRVIEQTLG 276

Query: 352 QEVXE 366
           Q+V E
Sbjct: 277 QKVIE 281



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>CYNT_HELPY (O24855) Carbonic anhydrase 1 (EC 4.2.1.1)|
          Length = 221

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 372 VSLXNLLTYPFVKEGVTNGTLKLVGGHYDXVSGK 271
           + L NLL+Y F++E  +   LK+ G HY   +G+
Sbjct: 161 LQLNNLLSYDFIQEKASKNELKIFGWHYIIETGR 194



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>ACCD_CHLVU (P56293) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           beta (EC 6.4.1.2) (ACCase beta chain)
          Length = 411

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = +1

Query: 172 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDXVVVAADELEGSVGHTLLDERVG 351
           ALH H++   L+Y+ +  S  TGG   +   F + GD +      L G  G  ++++ + 
Sbjct: 192 ALHIHQNCAKLLYISVLTSPTTGG---VTASFAMLGDLLFAEPKALIGFAGRRVIEQTLQ 248

Query: 352 QEV 360
           +++
Sbjct: 249 EQL 251



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>PYRC_METKA (Q8TXX9) Dihydroorotase (EC 3.5.2.3) (DHOase)|
          Length = 426

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 187 DVNAMPWECVPVIVQYWMPDGPM*ICHKQ 101
           D  A+PW  +P I +   PDGP+ I H +
Sbjct: 154 DAPAVPWSTLPEIFRELSPDGPLTIFHPE 182



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>ACCD_EPIVI (P30064) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           beta (EC 6.4.1.2) (ACCase beta chain)
          Length = 493

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/66 (25%), Positives = 33/66 (50%)
 Frame = +1

Query: 172 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDXVVVAADELEGSVGHTLLDERVG 351
           AL  ++S+  L+YV +  S  TGG   +   F + GD ++   +      G  ++++ + 
Sbjct: 392 ALFDYQSNKKLLYVSILTSPTTGG---VTASFGMLGDIIIAEPNSYIAFAGKRVIEQTLH 448

Query: 352 QEVXEG 369
           + V EG
Sbjct: 449 KIVPEG 454



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>I18BP_MOUSE (Q9Z0M9) Interleukin-18-binding protein precursor (IL-18BP)|
           (Interferon gamma-inducing factor-binding protein)
          Length = 191

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -1

Query: 197 SSDRCECNAMGVRTRYCPVLDAGWPDVNLP*AIEPFFLHHFLTRNCTA 54
           S D C   +  V T+  P LD  WP+  +P       L+  LT +CTA
Sbjct: 41  SKDPCSSWSPAVPTKQYPALDVIWPEKEVP-------LNGTLTLSCTA 81



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>LPQT_MYCTU (P96384) Putative lipoprotein lpqT precursor|
          Length = 226

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -3

Query: 306 LVGGHYDXVSGKFETWEQ*IFPTG*LRHIQTYIYQDIVRSM 184
           ++ G YD    +  TW + +FPTG     Q Y+ Q  + S+
Sbjct: 163 MIQGSYDLHGRRLHTWNRIVFPTGAPPAKQRYLVQLTITSL 203



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>RPOZ_VIBPA (Q87TB0) DNA-directed RNA polymerase omega chain (EC 2.7.7.6) (RNAP|
           omega subunit) (Transcriptase omega chain) (RNA
           polymerase omega subunit)
          Length = 90

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +1

Query: 184 HRSDDILIYVRLYMSELTGGEDLLLPCFELAGDXVVVAADEL-EGSVGHTLLDERVGQEV 360
           +R D +LI  R      TGG+D L+P  E      V+A  E+ EG +   +LD R  QE 
Sbjct: 15  NRFDLVLIAARRARQMQTGGKDALVP--EENDKPTVIALREIEEGLITKEVLDARERQEQ 72

Query: 361 XE 366
            E
Sbjct: 73  QE 74



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>ACCD_CUSRE (P31562) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           beta (EC 6.4.1.2) (ACCase beta chain)
          Length = 497

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/63 (23%), Positives = 31/63 (49%)
 Frame = +1

Query: 172 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDXVVVAADELEGSVGHTLLDERVG 351
           AL+ ++S+  L+YV +  S   GG   +   F + GD ++V         G  ++++ + 
Sbjct: 379 ALYDYQSNKRLVYVSILTSPTAGG---VTASFGMLGDIIIVEPRAYVAFAGKRVIEQTLN 435

Query: 352 QEV 360
           Q +
Sbjct: 436 QTI 438



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>KI2S1_HUMAN (Q14954) Killer cell immunoglobulin-like receptor 2DS1 precursor|
           (MHC class I NK cell receptor Eb6 ActI) (CD158h antigen)
          Length = 304

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 336 KEGVTNGTLKLVGGHYDXVS 277
           +EG+ N TL+L+G H+D VS
Sbjct: 62  REGMFNDTLRLIGEHHDGVS 81



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>RPOZ_VIBVY (Q7MPX0) DNA-directed RNA polymerase omega chain (EC 2.7.7.6) (RNAP|
           omega subunit) (Transcriptase omega chain) (RNA
           polymerase omega subunit)
          Length = 90

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +1

Query: 184 HRSDDILIYVRLYMSELTGGEDLLLPCFELAGDXVVVAADEL-EGSVGHTLLDERVGQEV 360
           +R D +LI  R      TGG+D L+P  E      V+A  E+ EG +   +LD R  QE 
Sbjct: 15  NRFDLVLIAARRARQMQTGGKDSLVP--EENDKPTVIALREIEEGLITKEVLDARERQEQ 72

Query: 361 XE 366
            E
Sbjct: 73  QE 74



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>RPOZ_VIBVU (Q8DDV5) DNA-directed RNA polymerase omega chain (EC 2.7.7.6) (RNAP|
           omega subunit) (Transcriptase omega chain) (RNA
           polymerase omega subunit)
          Length = 90

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +1

Query: 184 HRSDDILIYVRLYMSELTGGEDLLLPCFELAGDXVVVAADEL-EGSVGHTLLDERVGQEV 360
           +R D +LI  R      TGG+D L+P  E      V+A  E+ EG +   +LD R  QE 
Sbjct: 15  NRFDLVLIAARRARQMQTGGKDSLVP--EENDKPTVIALREIEEGLITKEVLDARERQEQ 72

Query: 361 XE 366
            E
Sbjct: 73  QE 74



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>KI2L1_HUMAN (P43626) Killer cell immunoglobulin-like receptor 2DL1 precursor|
           (MHC class I NK cell receptor) (Natural
           killer-associated transcript 1) (NKAT-1) (p58 natural
           killer cell receptor clones CL-42/47.11) (p58 NK
           receptor) (p58.1 MHC class-I-speci
          Length = 348

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 336 KEGVTNGTLKLVGGHYDXVS 277
           +EG+ N TL+L+G H+D VS
Sbjct: 62  REGMFNDTLRLIGEHHDGVS 81



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>SCRA_LIMPO (Q25390) Alpha-scruin|
          Length = 918

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = -2

Query: 211 HISRYRPI--DVNAMPWECVPVIVQYWMPD 128
           +IS YRP+  D + +  E VPV + +W PD
Sbjct: 478 YISGYRPLPPDQDDLSKELVPVSIPFWPPD 507



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>IF4B_YEAST (P34167) Eukaryotic translation initiation factor 4B (eIF-4B)|
          Length = 436

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 199 YRPIDVNAMPWECVPVIVQYWMPDG 125
           YR + +N +PW+  P  VQ W+ DG
Sbjct: 101 YRAV-INNIPWDITPEGVQAWVEDG 124



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>VL1_HPV05 (P06917) Major capsid protein L1|
          Length = 516

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 59  YNSSSENGEEKKVLLLMANSHRAIRHPVLDNNGYALP 169
           +N  + NG++ +V  +  N HR  R  + D N +ALP
Sbjct: 51  FNVYNINGDKLEVPKVSGNQHRVFRLKLPDPNRFALP 87



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>RDRP_CNV (P15187) Probable RNA-directed RNA polymerase (EC 2.7.7.48)|
           [Contains: Protein P33]
          Length = 817

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
 Frame = +3

Query: 18  SFDXRRLNYASHSSTIPRQKMVKKKRFYCLWQIH-----IGPSGIQYWTITGTHSHGIAF 182
           S +  +  +  + +  P  K++ K      WQ+H       P G   +   G    G   
Sbjct: 538 SVEALQFEHGFYRAMYPGNKLLSK---LLDWQLHNKGKGYVPDGTITYRKEGCRMSGDIN 594

Query: 183 TSIGRYLDICTFVY-----VGVNRW 242
           TS+G YL +C  +Y     +G+N +
Sbjct: 595 TSLGNYLLMCAMIYGYMRHLGINEY 619



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>PUT4_YEAST (P15380) Proline-specific permease|
          Length = 627

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 132 GIQYWTITGTHSHGIAFTSIGRYLDICTFVYVG 230
           G +YW   G  +H +   S+G + DI T +  G
Sbjct: 287 GFRYWQHPGAFAHHLTGGSLGNFTDIYTGIIKG 319



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>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 108  WQIHIGPS-GIQYWTITGTHSH 170
            + I + P  G+ YWT+ G HSH
Sbjct: 4030 YAIAVNPKRGMMYWTVVGDHSH 4051



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>SYT_DEIRA (Q9RSP3) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 649

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = -2

Query: 250 NLPHRLTPTYTNVHISRYRPIDVNAMPWECVP----VIVQYWMPDGPM*ICHKQ 101
           NLP R   +YT      +RPI ++  P+  +     ++++++  D P+ +  +Q
Sbjct: 498 NLPERFDISYTGEDGQEHRPIMIHRAPFGSIERFTGILIEHYAGDFPLWLAPRQ 551



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>ACON_SCHPO (O13966) Aconitate hydratase, mitochondrial precursor (EC 4.2.1.3)|
           (Citrate hydro-lyase) (Aconitase)
          Length = 778

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -1

Query: 236 VNSDIYKR-TYIKISSDRCECNAMGVRTRYCPVLDAGWPDVNLP 108
           VN DI +  +Y+K+  DR  C     +      + AG P+V +P
Sbjct: 74  VNQDIERGVSYLKLRPDRVACQDATAQMAILQFMSAGMPEVAVP 117


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,029,378
Number of Sequences: 219361
Number of extensions: 1029215
Number of successful extensions: 3173
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3173
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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