Clone Name | rbah63e20 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RP1_CANFA (Q8MJ04) Oxygen-regulated protein 1 (Retinitis pigment... | 31 | 2.1 | 2 | DHYS_METKA (Q8TXD7) Probable deoxyhypusine synthase (EC 2.5.1.46... | 30 | 3.6 |
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>RP1_CANFA (Q8MJ04) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein| homolog) Length = 2141 Score = 31.2 bits (69), Expect = 2.1 Identities = 19/47 (40%), Positives = 28/47 (59%) Frame = +1 Query: 328 NTNPHTAVQALAFRRSSMTDSRR*NVVPCSRIRGEVQTKEHTSTQGG 468 NTNPH+A+Q+ R+S+ + +VV C+ G TK HTS+ G Sbjct: 921 NTNPHSALQS---RKSAPIYKKDRSVVSCNN-NGFAGTKSHTSSGEG 963
>DHYS_METKA (Q8TXD7) Probable deoxyhypusine synthase (EC 2.5.1.46) (DHS)| Length = 297 Score = 30.4 bits (67), Expect = 3.6 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +2 Query: 257 ADEAPMIEVPGVLDQIVGGFIWVLIQTH 340 ADE I PG+LD +VG +W+ Q H Sbjct: 162 ADEGVPIYSPGILDSMVGLHVWIHSQDH 189 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,171,495 Number of Sequences: 219361 Number of extensions: 1808686 Number of successful extensions: 3728 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3619 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3728 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)