Clone Information

BLAST Search Result

Clone Name	rbah63f12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_507580.1\| PREDICTED Oryza sativa (japonica cultivar-group...	482	e-133
2	ref\|XM_482105.1\| Oryza sativa (japonica cultivar-group), mRNA	482	e-133
3	ref\|XM_507214.2\| PREDICTED Oryza sativa (japonica cultivar-group...	482	e-133
4	dbj\|AK109433.2\| Oryza sativa (japonica cultivar-group) cDNA clon...	482	e-133
5	dbj\|AK112013.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	482	e-133
6	dbj\|AK104318.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	482	e-133
7	dbj\|AK069608.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	482	e-133
8	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	311	1e-81
9	dbj\|AP004675.3\| Oryza sativa (japonica cultivar-group) genomic D...	311	1e-81
10	dbj\|AP005443.3\| Oryza sativa (japonica cultivar-group) genomic D...	311	1e-81
11	dbj\|AK119345.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	311	1e-81
12	ref\|XM_426551.1\| PREDICTED: Gallus gallus similar to carbamoyl-p...	42	2.1
13	gb\|AC105330.8\| Mus musculus chromosome 15, clone RP23-281C10, co...	42	2.1
14	emb\|CR954965.4\| Mouse DNA sequence from clone RP23-19H11 on chro...	42	2.1
15	gb\|AC154430.3\| Mus musculus BAC clone RP24-208K8 from chromosome...	42	2.1
16	emb\|CT573326.1\| Pseudomonas entomophila str. L48 chromosome,comp...	42	2.1
17	emb\|AL670675.7\| Mouse DNA sequence from clone RP23-263N18 on chr...	42	2.1
18	emb\|AL670256.6\| Mouse DNA sequence from clone RP23-300H22 on chr...	42	2.1
19	gb\|CP000148.1\| Geobacter metallireducens GS-15, complete genome	40	8.3
20	gb\|AF538844.1\| Homo sapiens matrix metalloproteinase 9 (gelatina...	40	8.3
21	ref\|NM_004994.2\| Homo sapiens matrix metallopeptidase 9 (gelatin...	40	8.3
22	gb\|DQ194553.1\| Homo sapiens matrix metallopeptidase 9 (gelatinas...	40	8.3
23	ref\|XM_446838.1\| Candida glabrata CBS138, CAGL0H00891g partial mRNA	40	8.3
24	gb\|BC006093.1\| Homo sapiens matrix metallopeptidase 9 (gelatinas...	40	8.3
25	gb\|AC107743.14\| Mus musculus chromosome 1, clone RP23-326A12, co...	40	8.3
26	emb\|CR380954.1\| Candida glabrata strain CBS138 chromosome H comp...	40	8.3
27	emb\|BX842651.1\| Bdellovibrio bacteriovorus complete genome, stra...	40	8.3
28	emb\|AL939114.1\|SCO939114 Streptomyces coelicolor A3(2) complete ...	40	8.3
29	gb\|CP000230.1\| Rhodospirillum rubrum ATCC 11170, complete genome	40	8.3
30	gb\|AE016819.2\| Ashbya gossypii (= Eremothecium gossypii) ATCC 10...	40	8.3
31	gb\|AC073485.3\| Homo sapiens BAC clone RP11-798J16 from 2, comple...	40	8.3
32	gb\|AE004543.1\| Pseudomonas aeruginosa PAO1, section 104 of 529 o...	40	8.3
33	gb\|AY889934.1\| Synthetic construct Homo sapiens clone FLH116913....	40	8.3
34	ref\|NM_210926.1\| Eremothecium gossypii AFR025Cp (AFR025C), mRNA	40	8.3
35	gb\|AC139316.4\| Mus musculus BAC clone RP24-500I24 from 3, comple...	40	8.3
36	emb\|AL162458.10\| Human DNA sequence from clone RP11-465L10 on ch...	40	8.3
37	emb\|AL663092.15\| Mouse DNA sequence from clone RP23-91I20 on chr...	40	8.3
38	gb\|J05070.1\|HUM4COLA Human type IV collagenase mRNA, complete cds	40	8.3
39	gb\|M68353.1\|HUMIVCOL11 Human type IV collagenase (CLG4B) gene, e...	40	8.3

>ref|XM_507580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011E04.125
            mRNA
          Length = 1513

 Score =  482 bits (243), Expect = e-133
 Identities = 408/463 (88%)
 Strand = Plus / Minus

                                                                        
Query: 146  tctcatggaacaggcgaaatgaccactttgccggcggctcttcctgtctcgaggtaggaa 205
            ||||||||||  || || ||||| ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 1346 tctcatggaatgggtgagatgacaactttcccggtggctctccctgtctcgaggtaggag 1287

                                                                        
Query: 206  aacgcctccacgacctgggagaaggggaaaggccccttggggtcgaccaccggcttcacc 265
            || |||||||| ||||| ||||||| ||| |||||||||||||| |||| ||||||||||
Sbjct: 1286 aaggcctccacaacctgtgagaaggcgaatggccccttggggtccaccagcggcttcacc 1227

                                                                        
Query: 266  ttcccggactcgaggtaagggttgagcttcgccaggacggacccgtcggaggtgaccacg 325
            ||||||||||| ||||| |||||||||||| |||  || |||||||||||||||||||||
Sbjct: 1226 ttcccggactccaggtatgggttgagcttctccaacaccgacccgtcggaggtgaccacg 1167

                                                                        
Query: 326  aaccggaaccccggcggcgtgaccgcgccggtgaggaccaccacgctgccgccttccttc 385
            ||||||||||||||||||  ||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 1166 aaccggaaccccggcggcacgacggcgccggtgagcaccaccacgctgcccccttccttc 1107

                                                                        
Query: 386  accaccttgaccgccttctcgccctggccgactgcgtcgaacacgacgtcgtacttgtcc 445
            ||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 1106 accaccttgacggccttctcgccctggccgacggcgtcgaggacgacgtcgtacttgtcc 1047

                                                                        
Query: 446  ggcatgtcgtcgaagctgtccttggtgtagtcgatggccacgtcggctcccaggcttttc 505
            |||| ||| |||||| | |||||||||||||||||||| |||||||| || ||||| || 
Sbjct: 1046 ggcaggtcctcgaagttctccttggtgtagtcgatggcgacgtcggcgccgaggctcttg 987

                                                                        
Query: 506  aggagctccagcttcggggtgctggctgtggccgccaccttcgatgcgccgtaaacttgc 565
            |||||||||||||| || ||||| || || ||||||||||| || |||||||| || |||
Sbjct: 986  aggagctccagcttgggcgtgctcgccgtcgccgccaccttggacgcgccgtacacgtgc 927

                                                       
Query: 566  ttcgccagctggatgacaagggacccgactccaccggcgccgc 608
            || |||||||||||| | ||||| ||||| || ||||||||||
Sbjct: 926  ttggccagctggatggcgagggagccgacgccgccggcgccgc 884

to top

>ref|XM_482105.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1392

 Score =  482 bits (243), Expect = e-133
 Identities = 408/463 (88%)
 Strand = Plus / Minus

                                                                        
Query: 146  tctcatggaacaggcgaaatgaccactttgccggcggctcttcctgtctcgaggtaggaa 205
            ||||||||||  || || ||||| ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 1189 tctcatggaatgggtgagatgacaactttcccggtggctctccctgtctcgaggtaggag 1130

                                                                        
Query: 206  aacgcctccacgacctgggagaaggggaaaggccccttggggtcgaccaccggcttcacc 265
            || |||||||| ||||| ||||||| ||| |||||||||||||| |||| ||||||||||
Sbjct: 1129 aaggcctccacaacctgtgagaaggcgaatggccccttggggtccaccagcggcttcacc 1070

                                                                        
Query: 266  ttcccggactcgaggtaagggttgagcttcgccaggacggacccgtcggaggtgaccacg 325
            ||||||||||| ||||| |||||||||||| |||  || |||||||||||||||||||||
Sbjct: 1069 ttcccggactccaggtatgggttgagcttctccaacaccgacccgtcggaggtgaccacg 1010

                                                                        
Query: 326  aaccggaaccccggcggcgtgaccgcgccggtgaggaccaccacgctgccgccttccttc 385
            ||||||||||||||||||  ||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 1009 aaccggaaccccggcggcacgacggcgccggtgagcaccaccacgctgcccccttccttc 950

                                                                        
Query: 386  accaccttgaccgccttctcgccctggccgactgcgtcgaacacgacgtcgtacttgtcc 445
            ||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 949  accaccttgacggccttctcgccctggccgacggcgtcgaggacgacgtcgtacttgtcc 890

                                                                        
Query: 446  ggcatgtcgtcgaagctgtccttggtgtagtcgatggccacgtcggctcccaggcttttc 505
            |||| ||| |||||| | |||||||||||||||||||| |||||||| || ||||| || 
Sbjct: 889  ggcaggtcctcgaagttctccttggtgtagtcgatggcgacgtcggcgccgaggctcttg 830

                                                                        
Query: 506  aggagctccagcttcggggtgctggctgtggccgccaccttcgatgcgccgtaaacttgc 565
            |||||||||||||| || ||||| || || ||||||||||| || |||||||| || |||
Sbjct: 829  aggagctccagcttgggcgtgctcgccgtcgccgccaccttggacgcgccgtacacgtgc 770

                                                       
Query: 566  ttcgccagctggatgacaagggacccgactccaccggcgccgc 608
            || |||||||||||| | ||||| ||||| || ||||||||||
Sbjct: 769  ttggccagctggatggcgagggagccgacgccgccggcgccgc 727

to top

>ref|XM_507214.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011E04.125
            mRNA
          Length = 1510

 Score =  482 bits (243), Expect = e-133
 Identities = 408/463 (88%)
 Strand = Plus / Minus

                                                                        
Query: 146  tctcatggaacaggcgaaatgaccactttgccggcggctcttcctgtctcgaggtaggaa 205
            ||||||||||  || || ||||| ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 1234 tctcatggaatgggtgagatgacaactttcccggtggctctccctgtctcgaggtaggag 1175

                                                                        
Query: 206  aacgcctccacgacctgggagaaggggaaaggccccttggggtcgaccaccggcttcacc 265
            || |||||||| ||||| ||||||| ||| |||||||||||||| |||| ||||||||||
Sbjct: 1174 aaggcctccacaacctgtgagaaggcgaatggccccttggggtccaccagcggcttcacc 1115

                                                                        
Query: 266  ttcccggactcgaggtaagggttgagcttcgccaggacggacccgtcggaggtgaccacg 325
            ||||||||||| ||||| |||||||||||| |||  || |||||||||||||||||||||
Sbjct: 1114 ttcccggactccaggtatgggttgagcttctccaacaccgacccgtcggaggtgaccacg 1055

                                                                        
Query: 326  aaccggaaccccggcggcgtgaccgcgccggtgaggaccaccacgctgccgccttccttc 385
            ||||||||||||||||||  ||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 1054 aaccggaaccccggcggcacgacggcgccggtgagcaccaccacgctgcccccttccttc 995

                                                                        
Query: 386  accaccttgaccgccttctcgccctggccgactgcgtcgaacacgacgtcgtacttgtcc 445
            ||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 994  accaccttgacggccttctcgccctggccgacggcgtcgaggacgacgtcgtacttgtcc 935

                                                                        
Query: 446  ggcatgtcgtcgaagctgtccttggtgtagtcgatggccacgtcggctcccaggcttttc 505
            |||| ||| |||||| | |||||||||||||||||||| |||||||| || ||||| || 
Sbjct: 934  ggcaggtcctcgaagttctccttggtgtagtcgatggcgacgtcggcgccgaggctcttg 875

                                                                        
Query: 506  aggagctccagcttcggggtgctggctgtggccgccaccttcgatgcgccgtaaacttgc 565
            |||||||||||||| || ||||| || || ||||||||||| || |||||||| || |||
Sbjct: 874  aggagctccagcttgggcgtgctcgccgtcgccgccaccttggacgcgccgtacacgtgc 815

                                                       
Query: 566  ttcgccagctggatgacaagggacccgactccaccggcgccgc 608
            || |||||||||||| | ||||| ||||| || ||||||||||
Sbjct: 814  ttggccagctggatggcgagggagccgacgccgccggcgccgc 772

to top

>dbj|AK109433.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C06, full
            insert sequence
          Length = 1503

 Score =  482 bits (243), Expect = e-133
 Identities = 408/463 (88%)
 Strand = Plus / Minus

                                                                        
Query: 146  tctcatggaacaggcgaaatgaccactttgccggcggctcttcctgtctcgaggtaggaa 205
            ||||||||||  || || ||||| ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 1340 tctcatggaatgggtgagatgacaactttcccggtggctctccctgtctcgaggtaggag 1281

                                                                        
Query: 206  aacgcctccacgacctgggagaaggggaaaggccccttggggtcgaccaccggcttcacc 265
            || |||||||| ||||| ||||||| ||| |||||||||||||| |||| ||||||||||
Sbjct: 1280 aaggcctccacaacctgtgagaaggcgaatggccccttggggtccaccagcggcttcacc 1221

                                                                        
Query: 266  ttcccggactcgaggtaagggttgagcttcgccaggacggacccgtcggaggtgaccacg 325
            ||||||||||| ||||| |||||||||||| |||  || |||||||||||||||||||||
Sbjct: 1220 ttcccggactccaggtatgggttgagcttctccaacaccgacccgtcggaggtgaccacg 1161

                                                                        
Query: 326  aaccggaaccccggcggcgtgaccgcgccggtgaggaccaccacgctgccgccttccttc 385
            ||||||||||||||||||  ||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 1160 aaccggaaccccggcggcacgacggcgccggtgagcaccaccacgctgcccccttccttc 1101

                                                                        
Query: 386  accaccttgaccgccttctcgccctggccgactgcgtcgaacacgacgtcgtacttgtcc 445
            ||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 1100 accaccttgacggccttctcgccctggccgacggcgtcgaggacgacgtcgtacttgtcc 1041

                                                                        
Query: 446  ggcatgtcgtcgaagctgtccttggtgtagtcgatggccacgtcggctcccaggcttttc 505
            |||| ||| |||||| | |||||||||||||||||||| |||||||| || ||||| || 
Sbjct: 1040 ggcaggtcctcgaagttctccttggtgtagtcgatggcgacgtcggcgccgaggctcttg 981

                                                                        
Query: 506  aggagctccagcttcggggtgctggctgtggccgccaccttcgatgcgccgtaaacttgc 565
            |||||||||||||| || ||||| || || ||||||||||| || |||||||| || |||
Sbjct: 980  aggagctccagcttgggcgtgctcgccgtcgccgccaccttggacgcgccgtacacgtgc 921

                                                       
Query: 566  ttcgccagctggatgacaagggacccgactccaccggcgccgc 608
            || |||||||||||| | ||||| ||||| || ||||||||||
Sbjct: 920  ttggccagctggatggcgagggagccgacgccgccggcgccgc 878

to top

>dbj|AK112013.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C09, full
           insert sequence
          Length = 980

 Score =  482 bits (243), Expect = e-133
 Identities = 408/463 (88%)
 Strand = Plus / Minus

                                                                       
Query: 146 tctcatggaacaggcgaaatgaccactttgccggcggctcttcctgtctcgaggtaggaa 205
           ||||||||||  || || ||||| ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 682 tctcatggaatgggtgagatgacaactttcccggtggctctccctgtctcgaggtaggag 623

                                                                       
Query: 206 aacgcctccacgacctgggagaaggggaaaggccccttggggtcgaccaccggcttcacc 265
           || |||||||| ||||| ||||||| ||| |||||||||||||| |||| ||||||||||
Sbjct: 622 aaggcctccacaacctgtgagaaggcgaatggccccttggggtccaccagcggcttcacc 563

                                                                       
Query: 266 ttcccggactcgaggtaagggttgagcttcgccaggacggacccgtcggaggtgaccacg 325
           ||||||||||| ||||| |||||||||||| |||  || |||||||||||||||||||||
Sbjct: 562 ttcccggactccaggtatgggttgagcttctccaacaccgacccgtcggaggtgaccacg 503

                                                                       
Query: 326 aaccggaaccccggcggcgtgaccgcgccggtgaggaccaccacgctgccgccttccttc 385
           ||||||||||||||||||  ||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 502 aaccggaaccccggcggcacgacggcgccggtgagcaccaccacgctgcccccttccttc 443

                                                                       
Query: 386 accaccttgaccgccttctcgccctggccgactgcgtcgaacacgacgtcgtacttgtcc 445
           ||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 442 accaccttgacggccttctcgccctggccgacggcgtcgaggacgacgtcgtacttgtcc 383

                                                                       
Query: 446 ggcatgtcgtcgaagctgtccttggtgtagtcgatggccacgtcggctcccaggcttttc 505
           |||| ||| |||||| | |||||||||||||||||||| |||||||| || ||||| || 
Sbjct: 382 ggcaggtcctcgaagttctccttggtgtagtcgatggcgacgtcggcgccgaggctcttg 323

                                                                       
Query: 506 aggagctccagcttcggggtgctggctgtggccgccaccttcgatgcgccgtaaacttgc 565
           |||||||||||||| || ||||| || || ||||||||||| || |||||||| || |||
Sbjct: 322 aggagctccagcttgggcgtgctcgccgtcgccgccaccttggacgcgccgtacacgtgc 263

                                                      
Query: 566 ttcgccagctggatgacaagggacccgactccaccggcgccgc 608
           || |||||||||||| | ||||| ||||| || ||||||||||
Sbjct: 262 ttggccagctggatggcgagggagccgacgccgccggcgccgc 220

to top

>dbj|AK104318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D02, full
            insert sequence
          Length = 1392

 Score =  482 bits (243), Expect = e-133
 Identities = 408/463 (88%)
 Strand = Plus / Minus

                                                                        
Query: 146  tctcatggaacaggcgaaatgaccactttgccggcggctcttcctgtctcgaggtaggaa 205
            ||||||||||  || || ||||| ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 1189 tctcatggaatgggtgagatgacaactttcccggtggctctccctgtctcgaggtaggag 1130

                                                                        
Query: 206  aacgcctccacgacctgggagaaggggaaaggccccttggggtcgaccaccggcttcacc 265
            || |||||||| ||||| ||||||| ||| |||||||||||||| |||| ||||||||||
Sbjct: 1129 aaggcctccacaacctgtgagaaggcgaatggccccttggggtccaccagcggcttcacc 1070

                                                                        
Query: 266  ttcccggactcgaggtaagggttgagcttcgccaggacggacccgtcggaggtgaccacg 325
            ||||||||||| ||||| |||||||||||| |||  || |||||||||||||||||||||
Sbjct: 1069 ttcccggactccaggtatgggttgagcttctccaacaccgacccgtcggaggtgaccacg 1010

                                                                        
Query: 326  aaccggaaccccggcggcgtgaccgcgccggtgaggaccaccacgctgccgccttccttc 385
            ||||||||||||||||||  ||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 1009 aaccggaaccccggcggcacgacggcgccggtgagcaccaccacgctgcccccttccttc 950

                                                                        
Query: 386  accaccttgaccgccttctcgccctggccgactgcgtcgaacacgacgtcgtacttgtcc 445
            ||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 949  accaccttgacggccttctcgccctggccgacggcgtcgaggacgacgtcgtacttgtcc 890

                                                                        
Query: 446  ggcatgtcgtcgaagctgtccttggtgtagtcgatggccacgtcggctcccaggcttttc 505
            |||| ||| |||||| | |||||||||||||||||||| |||||||| || ||||| || 
Sbjct: 889  ggcaggtcctcgaagttctccttggtgtagtcgatggcgacgtcggcgccgaggctcttg 830

                                                                        
Query: 506  aggagctccagcttcggggtgctggctgtggccgccaccttcgatgcgccgtaaacttgc 565
            |||||||||||||| || ||||| || || ||||||||||| || |||||||| || |||
Sbjct: 829  aggagctccagcttgggcgtgctcgccgtcgccgccaccttggacgcgccgtacacgtgc 770

                                                       
Query: 566  ttcgccagctggatgacaagggacccgactccaccggcgccgc 608
            || |||||||||||| | ||||| ||||| || ||||||||||
Sbjct: 769  ttggccagctggatggcgagggagccgacgccgccggcgccgc 727

to top

>dbj|AK069608.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N13, full
            insert sequence
          Length = 1510

 Score =  482 bits (243), Expect = e-133
 Identities = 408/463 (88%)
 Strand = Plus / Minus

                                                                        
Query: 146  tctcatggaacaggcgaaatgaccactttgccggcggctcttcctgtctcgaggtaggaa 205
            ||||||||||  || || ||||| ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 1234 tctcatggaatgggtgagatgacaactttcccggtggctctccctgtctcgaggtaggag 1175

                                                                        
Query: 206  aacgcctccacgacctgggagaaggggaaaggccccttggggtcgaccaccggcttcacc 265
            || |||||||| ||||| ||||||| ||| |||||||||||||| |||| ||||||||||
Sbjct: 1174 aaggcctccacaacctgtgagaaggcgaatggccccttggggtccaccagcggcttcacc 1115

                                                                        
Query: 266  ttcccggactcgaggtaagggttgagcttcgccaggacggacccgtcggaggtgaccacg 325
            ||||||||||| ||||| |||||||||||| |||  || |||||||||||||||||||||
Sbjct: 1114 ttcccggactccaggtatgggttgagcttctccaacaccgacccgtcggaggtgaccacg 1055

                                                                        
Query: 326  aaccggaaccccggcggcgtgaccgcgccggtgaggaccaccacgctgccgccttccttc 385
            ||||||||||||||||||  ||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 1054 aaccggaaccccggcggcacgacggcgccggtgagcaccaccacgctgcccccttccttc 995

                                                                        
Query: 386  accaccttgaccgccttctcgccctggccgactgcgtcgaacacgacgtcgtacttgtcc 445
            ||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 994  accaccttgacggccttctcgccctggccgacggcgtcgaggacgacgtcgtacttgtcc 935

                                                                        
Query: 446  ggcatgtcgtcgaagctgtccttggtgtagtcgatggccacgtcggctcccaggcttttc 505
            |||| ||| |||||| | |||||||||||||||||||| |||||||| || ||||| || 
Sbjct: 934  ggcaggtcctcgaagttctccttggtgtagtcgatggcgacgtcggcgccgaggctcttg 875

                                                                        
Query: 506  aggagctccagcttcggggtgctggctgtggccgccaccttcgatgcgccgtaaacttgc 565
            |||||||||||||| || ||||| || || ||||||||||| || |||||||| || |||
Sbjct: 874  aggagctccagcttgggcgtgctcgccgtcgccgccaccttggacgcgccgtacacgtgc 815

                                                       
Query: 566  ttcgccagctggatgacaagggacccgactccaccggcgccgc 608
            || |||||||||||| | ||||| ||||| || ||||||||||
Sbjct: 814  ttggccagctggatggcgagggagccgacgccgccggcgccgc 772

to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  311 bits (157), Expect = 1e-81
 Identities = 241/269 (89%)
 Strand = Plus / Plus

                                                                            
Query: 146      tctcatggaacaggcgaaatgaccactttgccggcggctcttcctgtctcgaggtaggaa 205
                ||||||||||  || || ||||| ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 17848737 tctcatggaatgggtgagatgacaactttcccggtggctctccctgtctcgaggtaggag 17848796

                                                                            
Query: 206      aacgcctccacgacctgggagaaggggaaaggccccttggggtcgaccaccggcttcacc 265
                || |||||||| ||||| ||||||| ||| |||||||||||||| |||| ||||||||||
Sbjct: 17848797 aaggcctccacaacctgtgagaaggcgaatggccccttggggtccaccagcggcttcacc 17848856

                                                                            
Query: 266      ttcccggactcgaggtaagggttgagcttcgccaggacggacccgtcggaggtgaccacg 325
                ||||||||||| ||||| |||||||||||| |||  || |||||||||||||||||||||
Sbjct: 17848857 ttcccggactccaggtatgggttgagcttctccaacaccgacccgtcggaggtgaccacg 17848916

                                                                            
Query: 326      aaccggaaccccggcggcgtgaccgcgccggtgaggaccaccacgctgccgccttccttc 385
                ||||||||||||||||||  ||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 17848917 aaccggaaccccggcggcacgacggcgccggtgagcaccaccacgctgcccccttccttc 17848976

                                             
Query: 386      accaccttgaccgccttctcgccctggcc 414
                ||||||||||| |||||||||||||||||
Sbjct: 17848977 accaccttgacggccttctcgccctggcc 17849005



 Score =  151 bits (76), Expect = 3e-33
 Identities = 142/164 (86%)
 Strand = Plus / Plus

                                                                            
Query: 413      ccgactgcgtcgaacacgacgtcgtacttgtccggcatgtcgtcgaagctgtccttggtg 472
                ||||| |||||||  |||||||||||||||||||||| ||| |||||| | |||||||||
Sbjct: 17849108 ccgacggcgtcgaggacgacgtcgtacttgtccggcaggtcctcgaagttctccttggtg 17849167

                                                                            
Query: 473      tagtcgatggccacgtcggctcccaggcttttcaggagctccagcttcggggtgctggct 532
                ||||||||||| |||||||| || ||||| || |||||||||||||| || ||||| || 
Sbjct: 17849168 tagtcgatggcgacgtcggcgccgaggctcttgaggagctccagcttgggcgtgctcgcc 17849227

                                                            
Query: 533      gtggccgccaccttcgatgcgccgtaaacttgcttcgccagctg 576
                || ||||||||||| || |||||||| || ||||| ||||||||
Sbjct: 17849228 gtcgccgccaccttggacgcgccgtacacgtgcttggccagctg 17849271

to top

>dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0709D11
          Length = 146856

 Score =  311 bits (157), Expect = 1e-81
 Identities = 241/269 (89%)
 Strand = Plus / Plus

                                                                         
Query: 146   tctcatggaacaggcgaaatgaccactttgccggcggctcttcctgtctcgaggtaggaa 205
             ||||||||||  || || ||||| ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 70243 tctcatggaatgggtgagatgacaactttcccggtggctctccctgtctcgaggtaggag 70302

                                                                         
Query: 206   aacgcctccacgacctgggagaaggggaaaggccccttggggtcgaccaccggcttcacc 265
             || |||||||| ||||| ||||||| ||| |||||||||||||| |||| ||||||||||
Sbjct: 70303 aaggcctccacaacctgtgagaaggcgaatggccccttggggtccaccagcggcttcacc 70362

                                                                         
Query: 266   ttcccggactcgaggtaagggttgagcttcgccaggacggacccgtcggaggtgaccacg 325
             ||||||||||| ||||| |||||||||||| |||  || |||||||||||||||||||||
Sbjct: 70363 ttcccggactccaggtatgggttgagcttctccaacaccgacccgtcggaggtgaccacg 70422

                                                                         
Query: 326   aaccggaaccccggcggcgtgaccgcgccggtgaggaccaccacgctgccgccttccttc 385
             ||||||||||||||||||  ||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 70423 aaccggaaccccggcggcacgacggcgccggtgagcaccaccacgctgcccccttccttc 70482

                                          
Query: 386   accaccttgaccgccttctcgccctggcc 414
             ||||||||||| |||||||||||||||||
Sbjct: 70483 accaccttgacggccttctcgccctggcc 70511



 Score =  151 bits (76), Expect = 3e-33
 Identities = 142/164 (86%)
 Strand = Plus / Plus

                                                                         
Query: 413   ccgactgcgtcgaacacgacgtcgtacttgtccggcatgtcgtcgaagctgtccttggtg 472
             ||||| |||||||  |||||||||||||||||||||| ||| |||||| | |||||||||
Sbjct: 70614 ccgacggcgtcgaggacgacgtcgtacttgtccggcaggtcctcgaagttctccttggtg 70673

                                                                         
Query: 473   tagtcgatggccacgtcggctcccaggcttttcaggagctccagcttcggggtgctggct 532
             ||||||||||| |||||||| || ||||| || |||||||||||||| || ||||| || 
Sbjct: 70674 tagtcgatggcgacgtcggcgccgaggctcttgaggagctccagcttgggcgtgctcgcc 70733

                                                         
Query: 533   gtggccgccaccttcgatgcgccgtaaacttgcttcgccagctg 576
             || ||||||||||| || |||||||| || ||||| ||||||||
Sbjct: 70734 gtcgccgccaccttggacgcgccgtacacgtgcttggccagctg 70777

to top

>dbj|AP005443.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0011E04
          Length = 136767

 Score =  311 bits (157), Expect = 1e-81
 Identities = 241/269 (89%)
 Strand = Plus / Plus

                                                                          
Query: 146    tctcatggaacaggcgaaatgaccactttgccggcggctcttcctgtctcgaggtaggaa 205
              ||||||||||  || || ||||| ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 123131 tctcatggaatgggtgagatgacaactttcccggtggctctccctgtctcgaggtaggag 123190

                                                                          
Query: 206    aacgcctccacgacctgggagaaggggaaaggccccttggggtcgaccaccggcttcacc 265
              || |||||||| ||||| ||||||| ||| |||||||||||||| |||| ||||||||||
Sbjct: 123191 aaggcctccacaacctgtgagaaggcgaatggccccttggggtccaccagcggcttcacc 123250

                                                                          
Query: 266    ttcccggactcgaggtaagggttgagcttcgccaggacggacccgtcggaggtgaccacg 325
              ||||||||||| ||||| |||||||||||| |||  || |||||||||||||||||||||
Sbjct: 123251 ttcccggactccaggtatgggttgagcttctccaacaccgacccgtcggaggtgaccacg 123310

                                                                          
Query: 326    aaccggaaccccggcggcgtgaccgcgccggtgaggaccaccacgctgccgccttccttc 385
              ||||||||||||||||||  ||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 123311 aaccggaaccccggcggcacgacggcgccggtgagcaccaccacgctgcccccttccttc 123370

                                           
Query: 386    accaccttgaccgccttctcgccctggcc 414
              ||||||||||| |||||||||||||||||
Sbjct: 123371 accaccttgacggccttctcgccctggcc 123399



 Score =  151 bits (76), Expect = 3e-33
 Identities = 142/164 (86%)
 Strand = Plus / Plus

                                                                          
Query: 413    ccgactgcgtcgaacacgacgtcgtacttgtccggcatgtcgtcgaagctgtccttggtg 472
              ||||| |||||||  |||||||||||||||||||||| ||| |||||| | |||||||||
Sbjct: 123502 ccgacggcgtcgaggacgacgtcgtacttgtccggcaggtcctcgaagttctccttggtg 123561

                                                                          
Query: 473    tagtcgatggccacgtcggctcccaggcttttcaggagctccagcttcggggtgctggct 532
              ||||||||||| |||||||| || ||||| || |||||||||||||| || ||||| || 
Sbjct: 123562 tagtcgatggcgacgtcggcgccgaggctcttgaggagctccagcttgggcgtgctcgcc 123621

                                                          
Query: 533    gtggccgccaccttcgatgcgccgtaaacttgcttcgccagctg 576
              || ||||||||||| || |||||||| || ||||| ||||||||
Sbjct: 123622 gtcgccgccaccttggacgcgccgtacacgtgcttggccagctg 123665

to top

>dbj|AK119345.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-E02, full
            insert sequence
          Length = 2944

 Score =  311 bits (157), Expect = 1e-81
 Identities = 241/269 (89%)
 Strand = Plus / Plus

                                                                        
Query: 146  tctcatggaacaggcgaaatgaccactttgccggcggctcttcctgtctcgaggtaggaa 205
            ||||||||||  || || ||||| ||||| |||| |||||| ||||||||||||||||| 
Sbjct: 1197 tctcatggaatgggtgagatgacaactttcccggtggctctccctgtctcgaggtaggag 1256

                                                                        
Query: 206  aacgcctccacgacctgggagaaggggaaaggccccttggggtcgaccaccggcttcacc 265
            || |||||||| ||||| ||||||| ||| |||||||||||||| |||| ||||||||||
Sbjct: 1257 aaggcctccacaacctgtgagaaggcgaatggccccttggggtccaccagcggcttcacc 1316

                                                                        
Query: 266  ttcccggactcgaggtaagggttgagcttcgccaggacggacccgtcggaggtgaccacg 325
            ||||||||||| ||||| |||||||||||| |||  || |||||||||||||||||||||
Sbjct: 1317 ttcccggactccaggtatgggttgagcttctccaacaccgacccgtcggaggtgaccacg 1376

                                                                        
Query: 326  aaccggaaccccggcggcgtgaccgcgccggtgaggaccaccacgctgccgccttccttc 385
            ||||||||||||||||||  ||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 1377 aaccggaaccccggcggcacgacggcgccggtgagcaccaccacgctgcccccttccttc 1436

                                         
Query: 386  accaccttgaccgccttctcgccctggcc 414
            ||||||||||| |||||||||||||||||
Sbjct: 1437 accaccttgacggccttctcgccctggcc 1465



 Score =  151 bits (76), Expect = 3e-33
 Identities = 142/164 (86%)
 Strand = Plus / Plus

                                                                        
Query: 413  ccgactgcgtcgaacacgacgtcgtacttgtccggcatgtcgtcgaagctgtccttggtg 472
            ||||| |||||||  |||||||||||||||||||||| ||| |||||| | |||||||||
Sbjct: 1568 ccgacggcgtcgaggacgacgtcgtacttgtccggcaggtcctcgaagttctccttggtg 1627

                                                                        
Query: 473  tagtcgatggccacgtcggctcccaggcttttcaggagctccagcttcggggtgctggct 532
            ||||||||||| |||||||| || ||||| || |||||||||||||| || ||||| || 
Sbjct: 1628 tagtcgatggcgacgtcggcgccgaggctcttgaggagctccagcttgggcgtgctcgcc 1687

                                                        
Query: 533  gtggccgccaccttcgatgcgccgtaaacttgcttcgccagctg 576
            || ||||||||||| || |||||||| || ||||| ||||||||
Sbjct: 1688 gtcgccgccaccttggacgcgccgtacacgtgcttggccagctg 1731

to top

>ref|XM_426551.1| PREDICTED: Gallus gallus similar to carbamoyl-phosphate synthetase
           III (LOC428994), mRNA
          Length = 6789

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 503 ttcaggagctccagcttcggggtgc 527
           |||||||||||||||||||| ||||
Sbjct: 944 ttcaggagctccagcttcggcgtgc 968

to top

>gb|AC105330.8| Mus musculus chromosome 15, clone RP23-281C10, complete sequence
          Length = 206675

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 38    catcacatatttttctgcttt 58
             |||||||||||||||||||||
Sbjct: 49629 catcacatatttttctgcttt 49609

to top

>emb|CR954965.4| Mouse DNA sequence from clone RP23-19H11 on chromosome X, complete
              sequence
          Length = 176114

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 227    aaggggaaaggccccttgggg 247
              |||||||||||||||||||||
Sbjct: 156903 aaggggaaaggccccttgggg 156923

to top

>gb|AC154430.3| Mus musculus BAC clone RP24-208K8 from chromosome 16, complete sequence
          Length = 178222

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 227    aaggggaaaggccccttgggg 247
              |||||||||||||||||||||
Sbjct: 152094 aaggggaaaggccccttgggg 152074

to top

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 469     ggtgtagtcgatggccacgtcggctccca 497
               ||||||||||| |||||||||||| ||||
Sbjct: 3014860 ggtgtagtcgacggccacgtcggcgccca 3014832

to top

>emb|AL670675.7| Mouse DNA sequence from clone RP23-263N18 on chromosome X, complete
              sequence
          Length = 173987

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 227    aaggggaaaggccccttgggg 247
              |||||||||||||||||||||
Sbjct: 121448 aaggggaaaggccccttgggg 121468

to top

>emb|AL670256.6| Mouse DNA sequence from clone RP23-300H22 on chromosome 4, complete
              sequence
          Length = 237318

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 71     caacaaatattttgctcagta 91
              |||||||||||||||||||||
Sbjct: 120555 caacaaatattttgctcagta 120535

to top

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 350     gcgccggtgaggaccaccac 369
               ||||||||||||||||||||
Sbjct: 1929802 gcgccggtgaggaccaccac 1929821

to top

>gb|AF538844.1| Homo sapiens matrix metalloproteinase 9 (gelatinase B, 92kD
            gelatinase, 92kD type IV collagenase) (MMP9) gene,
            complete cds
          Length = 11224

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  ggccacgtcggctcccaggc 500
            ||||||||||||||||||||
Sbjct: 7290 ggccacgtcggctcccaggc 7271

to top

>ref|NM_004994.2| Homo sapiens matrix metallopeptidase 9 (gelatinase B, 92kDa
            gelatinase, 92kDa type IV collagenase) (MMP9), mRNA
          Length = 2387

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  ggccacgtcggctcccaggc 500
            ||||||||||||||||||||
Sbjct: 1852 ggccacgtcggctcccaggc 1833

to top

>gb|DQ194553.1| Homo sapiens matrix metallopeptidase 9 (gelatinase B, 92kDa
            gelatinase, 92kDa type IV collagenase) (MMP9) gene,
            complete cds
          Length = 11651

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  ggccacgtcggctcccaggc 500
            ||||||||||||||||||||
Sbjct: 7299 ggccacgtcggctcccaggc 7280

to top

>ref|XM_446838.1| Candida glabrata CBS138, CAGL0H00891g partial mRNA
          Length = 4428

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  accatctctcataacatcac 43
           ||||||||||||||||||||
Sbjct: 375 accatctctcataacatcac 356

to top

>gb|BC006093.1| Homo sapiens matrix metallopeptidase 9 (gelatinase B, 92kDa
            gelatinase, 92kDa type IV collagenase), mRNA (cDNA clone
            MGC:12688 IMAGE:4054882), complete cds
          Length = 2373

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  ggccacgtcggctcccaggc 500
            ||||||||||||||||||||
Sbjct: 1838 ggccacgtcggctcccaggc 1819

to top

>gb|AC107743.14| Mus musculus chromosome 1, clone RP23-326A12, complete sequence
          Length = 221645

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ggggaaaggccccttggggt 248
             ||||||||||||||||||||
Sbjct: 57015 ggggaaaggccccttggggt 57034

to top

>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence
          Length = 1050361

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    accatctctcataacatcac 43
             ||||||||||||||||||||
Sbjct: 89939 accatctctcataacatcac 89958

to top

>emb|BX842651.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 6/11
          Length = 346161

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 536    gccgccaccttcgatgcgcc 555
              ||||||||||||||||||||
Sbjct: 198482 gccgccaccttcgatgcgcc 198463

to top

>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    ccgccttctcgccctggccg 415
              ||||||||||||||||||||
Sbjct: 108881 ccgccttctcgccctggccg 108900

to top

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 398     gccttctcgccctggccgactgcg 421
               |||||||||||||||||| |||||
Sbjct: 3316095 gccttctcgccctggccggctgcg 3316118

to top

>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 444    ccggcatgtcgtcgaagctgtcct 467
              ||||||||||||||| ||||||||
Sbjct: 486057 ccggcatgtcgtcgatgctgtcct 486034

to top

>gb|AC073485.3| Homo sapiens BAC clone RP11-798J16 from 2, complete sequence
          Length = 140811

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    atttttctgctttgtatgca 65
             ||||||||||||||||||||
Sbjct: 99456 atttttctgctttgtatgca 99437

to top

>gb|AE004543.1| Pseudomonas aeruginosa PAO1, section 104 of 529 of the complete
            genome
          Length = 10589

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 469  ggtgtagtcgatggccacgtcggc 492
            |||||||||||| |||||||||||
Sbjct: 7973 ggtgtagtcgatcgccacgtcggc 7996

to top

>gb|AY889934.1| Synthetic construct Homo sapiens clone FLH116913.01X matrix
            metalloproteinase 9 (MMP9) mRNA, complete cds
          Length = 2124

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  ggccacgtcggctcccaggc 500
            ||||||||||||||||||||
Sbjct: 1833 ggccacgtcggctcccaggc 1814

to top

>ref|NM_210926.1| Eremothecium gossypii AFR025Cp (AFR025C), mRNA
          Length = 1401

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 444 ccggcatgtcgtcgaagctgtcct 467
           ||||||||||||||| ||||||||
Sbjct: 575 ccggcatgtcgtcgatgctgtcct 598

to top

>gb|AC139316.4| Mus musculus BAC clone RP24-500I24 from 3, complete sequence
          Length = 187000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    tttttctgctttgtatgcac 66
             ||||||||||||||||||||
Sbjct: 52360 tttttctgctttgtatgcac 52379

to top

>emb|AL162458.10| Human DNA sequence from clone RP11-465L10 on chromosome 20, complete
              sequence
          Length = 150791

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 481    ggccacgtcggctcccaggc 500
              ||||||||||||||||||||
Sbjct: 100622 ggccacgtcggctcccaggc 100603

to top

>emb|AL663092.15| Mouse DNA sequence from clone RP23-91I20 on chromosome 2, complete
              sequence
          Length = 207554

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 523    ggtgctggctgtggccgccacctt 546
              |||||||||||||||| |||||||
Sbjct: 171909 ggtgctggctgtggccaccacctt 171932

to top

>gb|J05070.1|HUM4COLA Human type IV collagenase mRNA, complete cds
          Length = 2334

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  ggccacgtcggctcccaggc 500
            ||||||||||||||||||||
Sbjct: 1852 ggccacgtcggctcccaggc 1833

to top

>gb|M68353.1|HUMIVCOL11 Human type IV collagenase (CLG4B) gene, exon 11
          Length = 171

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 481 ggccacgtcggctcccaggc 500
           ||||||||||||||||||||
Sbjct: 93  ggccacgtcggctcccaggc 74


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,420,415
Number of Sequences: 3902068
Number of extensions: 4420415
Number of successful extensions: 98267
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97886
Number of HSP's gapped (non-prelim): 381
length of query: 608
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 585
effective length of database: 17,143,297,704
effective search space: 10028829156840
effective search space used: 10028829156840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result