ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63f20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_477101.1| Oryza sativa (japonica cultivar-group), mRNA 323 3e-85
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 323 3e-85
3dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic D... 323 3e-85
4dbj|AK121714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 3e-85
5dbj|AK058996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 3e-85
6gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genom... 238 2e-59
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 238 2e-59
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 238 2e-59
9dbj|AK070392.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 2e-59
10gb|M22207.1|SUT217G T.gratilla 217g gene encoding 217g protein, ... 50 0.008
11ref|NM_119843.2| Arabidopsis thaliana carbohydrate transporter/ ... 44 0.46
12emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA ... 44 0.46
13gb|AY122924.1| Arabidopsis thaliana unknown protein (At4g36790) ... 44 0.46
14gb|AY063899.1| Arabidopsis thaliana unknown protein (At4g36790) ... 44 0.46
15emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, ... 44 0.46
16emb|BX828097.1|CNS0A31Q Arabidopsis thaliana Full-length cDNA Co... 44 0.46
17emb|BX827767.1|CNS0A2ZM Arabidopsis thaliana Full-length cDNA Co... 44 0.46
18emb|BX826852.1|CNS0A356 Arabidopsis thaliana Full-length cDNA Co... 44 0.46
19emb|BX005415.5| Zebrafish DNA sequence from clone DKEY-21I5 in l... 44 0.46
20emb|BX004981.4| Zebrafish DNA sequence from clone CH211-169J7 in... 44 0.46
21ref|NM_105952.3| Arabidopsis thaliana transmembrane receptor AT1... 40 7.2
22gb|AY768346.1| Hepatitis C virus isolate 53416-R core E1 gene, p... 40 7.2
23gb|AY617673.1| Sterkiella histriomuscorum clone UGC1O0004_F20_R ... 40 7.2
24ref|XM_865628.1| PREDICTED: Bos taurus similar to Retinol dehydr... 40 7.2
25ref|XM_582373.2| PREDICTED: Bos taurus similar to Retinol dehydr... 40 7.2
26gb|AY149960.1| Arabidopsis thaliana At1g72940/F3N23_14 mRNA, com... 40 7.2
27emb|Y08085.1|HSMXAF139 Hyphomicrobium sp. mxaF gene, partial, st... 40 7.2
28emb|Y08076.1|HSMXAF520 Hyphomicrobium sp. mxaF gene, partial, st... 40 7.2
29emb|Y08074.1|HSMXAF69 Hyphomicrobium sp. mxaF gene, partial, str... 40 7.2
30emb|Y08083.1|HHMXAF H.hollandicum mxaF gene, partial 40 7.2
31emb|Y08080.1|HZMXAF H.zavarzinii mxaF gene, partial 40 7.2
32emb|Y08070.1|HVMXAF H.vulgare mxaF gene, partial 40 7.2
33gb|AC162301.3| Mus musculus chromosome 15, clone RP24-282H6, com... 40 7.2
34emb|AJ248285.1|CNSPAX03 Pyrococcus abyssi complete genome; segme... 40 7.2
35gb|AC165446.16| Medicago truncatula clone mth2-61p21, complete s... 40 7.2
36gb|AY064998.1| Arabidopsis thaliana At1g72940/F3N23_14 mRNA, com... 40 7.2
37emb|BX813603.1|CNS0ACAH Arabidopsis thaliana Full-length cDNA Co... 40 7.2
38emb|BX817099.1|CNS0ABWC Arabidopsis thaliana Full-length cDNA Co... 40 7.2
39emb|BX816156.1|CNS0ABXN Arabidopsis thaliana Full-length cDNA Co... 40 7.2
40gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N... 40 7.2

>ref|XM_477101.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1574

 Score =  323 bits (163), Expect = 3e-85
 Identities = 310/359 (86%)
 Strand = Plus / Minus

                                                                        
Query: 144  gcattgtccctgtcatgcttgaacacaaggtacaaagggctgtagaataggacacagata 203
            ||||| |||| |||| ||||||||||||||||||| ||||||||||| ||||| ||||  
Sbjct: 1152 gcattctcccggtcacgcttgaacacaaggtacaaggggctgtagaacaggacgcagacg 1093

                                                                        
Query: 204  ccaaaagggaggatcatcatggttagtagccctctcgacagcgcatacgccccttgtgct 263
            || ||||| |  |||||||| || || || || || || ||||||||||| |||| ||||
Sbjct: 1092 ccgaaaggaacaatcatcattgtcagaagtcccctggagagcgcatacgctccttctgct 1033

                                                                        
Query: 264  gatccgttggcgatgtttacagtcttggcgtcatagccatatatcttctcagtgaccaag 323
            || ||||| || | ||| |||||||||  ||||||||||||||||||||| |||||||||
Sbjct: 1032 gacccgttcgcaaggttcacagtcttgctgtcatagccatatatcttctcggtgaccaag 973

                                                                        
Query: 324  ccgacagcaggagcagccaatgaggcaaacgagccctcaaaagcccggtcaaaggcgtag 383
            |||||||| ||||| ||||  ||||| || |||||||| || || ||||| |||||||||
Sbjct: 972  ccgacagcgggagctgccagcgaggcgaatgagccctcgaatgcacggtcgaaggcgtag 913

                                                                        
Query: 384  atcatggtgcggtgcttgggagggactacctccgcaaacatggggttgtttgccgaagta 443
            |||||||| |||||||||||||||||||||||||||||||||||||||||||| || || 
Sbjct: 912  atcatggtccggtgcttgggagggactacctccgcaaacatggggttgtttgcagaggtg 853

                                                                       
Query: 444  gcacaccagctgatggtgatgcccatgaagaagagtgtgacggcataggcaaaccagta 502
            || |||||||| ||||||||||||||||||||||| |||||||| |||||  |||||||
Sbjct: 852  gcgcaccagcttatggtgatgcccatgaagaagagggtgacggcgtaggcggaccagta 794



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  323 bits (163), Expect = 3e-85
 Identities = 310/359 (86%)
 Strand = Plus / Minus

                                                                           
Query: 144     gcattgtccctgtcatgcttgaacacaaggtacaaagggctgtagaataggacacagata 203
               ||||| |||| |||| ||||||||||||||||||| ||||||||||| ||||| ||||  
Sbjct: 5916087 gcattctcccggtcacgcttgaacacaaggtacaaggggctgtagaacaggacgcagacg 5916028

                                                                           
Query: 204     ccaaaagggaggatcatcatggttagtagccctctcgacagcgcatacgccccttgtgct 263
               || ||||| |  |||||||| || || || || || || ||||||||||| |||| ||||
Sbjct: 5916027 ccgaaaggaacaatcatcattgtcagaagtcccctggagagcgcatacgctccttctgct 5915968

                                                                           
Query: 264     gatccgttggcgatgtttacagtcttggcgtcatagccatatatcttctcagtgaccaag 323
               || ||||| || | ||| |||||||||  ||||||||||||||||||||| |||||||||
Sbjct: 5915967 gacccgttcgcaaggttcacagtcttgctgtcatagccatatatcttctcggtgaccaag 5915908

                                                                           
Query: 324     ccgacagcaggagcagccaatgaggcaaacgagccctcaaaagcccggtcaaaggcgtag 383
               |||||||| ||||| ||||  ||||| || |||||||| || || ||||| |||||||||
Sbjct: 5915907 ccgacagcgggagctgccagcgaggcgaatgagccctcgaatgcacggtcgaaggcgtag 5915848

                                                                           
Query: 384     atcatggtgcggtgcttgggagggactacctccgcaaacatggggttgtttgccgaagta 443
               |||||||| |||||||||||||||||||||||||||||||||||||||||||| || || 
Sbjct: 5915847 atcatggtccggtgcttgggagggactacctccgcaaacatggggttgtttgcagaggtg 5915788

                                                                          
Query: 444     gcacaccagctgatggtgatgcccatgaagaagagtgtgacggcataggcaaaccagta 502
               || |||||||| ||||||||||||||||||||||| |||||||| |||||  |||||||
Sbjct: 5915787 gcgcaccagcttatggtgatgcccatgaagaagagggtgacggcgtaggcggaccagta 5915729



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>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_A05
          Length = 120823

 Score =  323 bits (163), Expect = 3e-85
 Identities = 310/359 (86%)
 Strand = Plus / Minus

                                                                         
Query: 144   gcattgtccctgtcatgcttgaacacaaggtacaaagggctgtagaataggacacagata 203
             ||||| |||| |||| ||||||||||||||||||| ||||||||||| ||||| ||||  
Sbjct: 58535 gcattctcccggtcacgcttgaacacaaggtacaaggggctgtagaacaggacgcagacg 58476

                                                                         
Query: 204   ccaaaagggaggatcatcatggttagtagccctctcgacagcgcatacgccccttgtgct 263
             || ||||| |  |||||||| || || || || || || ||||||||||| |||| ||||
Sbjct: 58475 ccgaaaggaacaatcatcattgtcagaagtcccctggagagcgcatacgctccttctgct 58416

                                                                         
Query: 264   gatccgttggcgatgtttacagtcttggcgtcatagccatatatcttctcagtgaccaag 323
             || ||||| || | ||| |||||||||  ||||||||||||||||||||| |||||||||
Sbjct: 58415 gacccgttcgcaaggttcacagtcttgctgtcatagccatatatcttctcggtgaccaag 58356

                                                                         
Query: 324   ccgacagcaggagcagccaatgaggcaaacgagccctcaaaagcccggtcaaaggcgtag 383
             |||||||| ||||| ||||  ||||| || |||||||| || || ||||| |||||||||
Sbjct: 58355 ccgacagcgggagctgccagcgaggcgaatgagccctcgaatgcacggtcgaaggcgtag 58296

                                                                         
Query: 384   atcatggtgcggtgcttgggagggactacctccgcaaacatggggttgtttgccgaagta 443
             |||||||| |||||||||||||||||||||||||||||||||||||||||||| || || 
Sbjct: 58295 atcatggtccggtgcttgggagggactacctccgcaaacatggggttgtttgcagaggtg 58236

                                                                        
Query: 444   gcacaccagctgatggtgatgcccatgaagaagagtgtgacggcataggcaaaccagta 502
             || |||||||| ||||||||||||||||||||||| |||||||| |||||  |||||||
Sbjct: 58235 gcgcaccagcttatggtgatgcccatgaagaagagggtgacggcgtaggcggaccagta 58177



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>dbj|AK121714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079D24, full
            insert sequence
          Length = 1917

 Score =  323 bits (163), Expect = 3e-85
 Identities = 310/359 (86%)
 Strand = Plus / Minus

                                                                        
Query: 144  gcattgtccctgtcatgcttgaacacaaggtacaaagggctgtagaataggacacagata 203
            ||||| |||| |||| ||||||||||||||||||| ||||||||||| ||||| ||||  
Sbjct: 1499 gcattctcccggtcacgcttgaacacaaggtacaaggggctgtagaacaggacgcagacg 1440

                                                                        
Query: 204  ccaaaagggaggatcatcatggttagtagccctctcgacagcgcatacgccccttgtgct 263
            || ||||| |  |||||||| || || || || || || ||||||||||| |||| ||||
Sbjct: 1439 ccgaaaggaacaatcatcattgtcagaagtcccctggagagcgcatacgctccttctgct 1380

                                                                        
Query: 264  gatccgttggcgatgtttacagtcttggcgtcatagccatatatcttctcagtgaccaag 323
            || ||||| || | ||| |||||||||  ||||||||||||||||||||| |||||||||
Sbjct: 1379 gacccgttcgcaaggttcacagtcttgctgtcatagccatatatcttctcggtgaccaag 1320

                                                                        
Query: 324  ccgacagcaggagcagccaatgaggcaaacgagccctcaaaagcccggtcaaaggcgtag 383
            |||||||| ||||| ||||  ||||| || |||||||| || || ||||| |||||||||
Sbjct: 1319 ccgacagcgggagctgccagcgaggcgaatgagccctcgaatgcacggtcgaaggcgtag 1260

                                                                        
Query: 384  atcatggtgcggtgcttgggagggactacctccgcaaacatggggttgtttgccgaagta 443
            |||||||| |||||||||||||||||||||||||||||||||||||||||||| || || 
Sbjct: 1259 atcatggtccggtgcttgggagggactacctccgcaaacatggggttgtttgcagaggtg 1200

                                                                       
Query: 444  gcacaccagctgatggtgatgcccatgaagaagagtgtgacggcataggcaaaccagta 502
            || |||||||| ||||||||||||||||||||||| |||||||| |||||  |||||||
Sbjct: 1199 gcgcaccagcttatggtgatgcccatgaagaagagggtgacggcgtaggcggaccagta 1141



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>dbj|AK058996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-G03, full
            insert sequence
          Length = 1574

 Score =  323 bits (163), Expect = 3e-85
 Identities = 310/359 (86%)
 Strand = Plus / Minus

                                                                        
Query: 144  gcattgtccctgtcatgcttgaacacaaggtacaaagggctgtagaataggacacagata 203
            ||||| |||| |||| ||||||||||||||||||| ||||||||||| ||||| ||||  
Sbjct: 1152 gcattctcccggtcacgcttgaacacaaggtacaaggggctgtagaacaggacgcagacg 1093

                                                                        
Query: 204  ccaaaagggaggatcatcatggttagtagccctctcgacagcgcatacgccccttgtgct 263
            || ||||| |  |||||||| || || || || || || ||||||||||| |||| ||||
Sbjct: 1092 ccgaaaggaacaatcatcattgtcagaagtcccctggagagcgcatacgctccttctgct 1033

                                                                        
Query: 264  gatccgttggcgatgtttacagtcttggcgtcatagccatatatcttctcagtgaccaag 323
            || ||||| || | ||| |||||||||  ||||||||||||||||||||| |||||||||
Sbjct: 1032 gacccgttcgcaaggttcacagtcttgctgtcatagccatatatcttctcggtgaccaag 973

                                                                        
Query: 324  ccgacagcaggagcagccaatgaggcaaacgagccctcaaaagcccggtcaaaggcgtag 383
            |||||||| ||||| ||||  ||||| || |||||||| || || ||||| |||||||||
Sbjct: 972  ccgacagcgggagctgccagcgaggcgaatgagccctcgaatgcacggtcgaaggcgtag 913

                                                                        
Query: 384  atcatggtgcggtgcttgggagggactacctccgcaaacatggggttgtttgccgaagta 443
            |||||||| |||||||||||||||||||||||||||||||||||||||||||| || || 
Sbjct: 912  atcatggtccggtgcttgggagggactacctccgcaaacatggggttgtttgcagaggtg 853

                                                                       
Query: 444  gcacaccagctgatggtgatgcccatgaagaagagtgtgacggcataggcaaaccagta 502
            || |||||||| ||||||||||||||||||||||| |||||||| |||||  |||||||
Sbjct: 852  gcgcaccagcttatggtgatgcccatgaagaagagggtgacggcgtaggcggaccagta 794



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>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete
              sequence
          Length = 166888

 Score =  238 bits (120), Expect = 2e-59
 Identities = 311/375 (82%)
 Strand = Plus / Minus

                                                                          
Query: 160    gcttgaacacaaggtacaaagggctgtagaataggacacagataccaaaagggaggatca 219
              |||||||||||| |||||  ||||||||||| | ||  || |  |||||||| |  ||||
Sbjct: 130613 gcttgaacacaaagtacagtgggctgtagaacaagaagcacaggccaaaaggaacaatca 130554

                                                                          
Query: 220    tcatggttagtagccctctcgacagcgcatacgccccttgtgctgatccgttggcgatgt 279
              |||| || | |||||| ||||| || ||||||||||||  | | ||||| ||  | |  |
Sbjct: 130553 tcattgtcaatagccccctcgagagtgcatacgcccctgctaccgatccattttccagat 130494

                                                                          
Query: 280    ttacagtcttggcgtcatagccatatatcttctcagtgaccaagccgacagcaggagcag 339
              | || ||||| ||||  |||||||| |||||||||||||||| ||| |||||||||||||
Sbjct: 130493 tgacggtctttgcgttgtagccatagatcttctcagtgaccatgccaacagcaggagcag 130434

                                                                          
Query: 340    ccaatgaggcaaacgagccctcaaaagcccggtcaaaggcgtagatcatggtgcggtgct 399
              |||  |||||||| || ||||| || || ||||| ||||| |||||||| ||||||||||
Sbjct: 130433 ccagggaggcaaatgaaccctcgaacgcgcggtcgaaggcatagatcatcgtgcggtgct 130374

                                                                          
Query: 400    tgggagggactacctccgcaaacatggggttgtttgccgaagtagcacaccagctgatgg 459
              |||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||
Sbjct: 130373 tgggagggactacctccgcaaacatggggttgtttgcgcaagtagcgcaccagctgatgg 130314

                                                                          
Query: 460    tgatgcccatgaagaagagtgtgacggcataggcaaaccagtagtcagttgactgangaa 519
              | || ||||| |||||||| ||||| ||| | ||| ||||||||||   ||||||| |||
Sbjct: 130313 taatccccatcaagaagagagtgacagcaaaagcagaccagtagtcgactgactgaggaa 130254

                             
Query: 520    tgacagtgaggagga 534
              |||| || |||||||
Sbjct: 130253 tgactgtaaggagga 130239



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  238 bits (120), Expect = 2e-59
 Identities = 311/375 (82%)
 Strand = Plus / Plus

                                                                            
Query: 160      gcttgaacacaaggtacaaagggctgtagaataggacacagataccaaaagggaggatca 219
                |||||||||||| |||||  ||||||||||| | ||  || |  |||||||| |  ||||
Sbjct: 33534467 gcttgaacacaaagtacagtgggctgtagaacaagaagcacaggccaaaaggaacaatca 33534526

                                                                            
Query: 220      tcatggttagtagccctctcgacagcgcatacgccccttgtgctgatccgttggcgatgt 279
                |||| || | |||||| ||||| || ||||||||||||  | | ||||| ||  | |  |
Sbjct: 33534527 tcattgtcaatagccccctcgagagtgcatacgcccctgctaccgatccattttccagat 33534586

                                                                            
Query: 280      ttacagtcttggcgtcatagccatatatcttctcagtgaccaagccgacagcaggagcag 339
                | || ||||| ||||  |||||||| |||||||||||||||| ||| |||||||||||||
Sbjct: 33534587 tgacggtctttgcgttgtagccatagatcttctcagtgaccatgccaacagcaggagcag 33534646

                                                                            
Query: 340      ccaatgaggcaaacgagccctcaaaagcccggtcaaaggcgtagatcatggtgcggtgct 399
                |||  |||||||| || ||||| || || ||||| ||||| |||||||| ||||||||||
Sbjct: 33534647 ccagggaggcaaatgaaccctcgaacgcgcggtcgaaggcatagatcatcgtgcggtgct 33534706

                                                                            
Query: 400      tgggagggactacctccgcaaacatggggttgtttgccgaagtagcacaccagctgatgg 459
                |||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||
Sbjct: 33534707 tgggagggactacctccgcaaacatggggttgtttgcgcaagtagcgcaccagctgatgg 33534766

                                                                            
Query: 460      tgatgcccatgaagaagagtgtgacggcataggcaaaccagtagtcagttgactgangaa 519
                | || ||||| |||||||| ||||| ||| | ||| ||||||||||   ||||||| |||
Sbjct: 33534767 taatccccatcaagaagagagtgacagcaaaagcagaccagtagtcgactgactgaggaa 33534826

                               
Query: 520      tgacagtgaggagga 534
                |||| || |||||||
Sbjct: 33534827 tgactgtaaggagga 33534841



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  238 bits (120), Expect = 2e-59
 Identities = 311/375 (82%)
 Strand = Plus / Plus

                                                                            
Query: 160      gcttgaacacaaggtacaaagggctgtagaataggacacagataccaaaagggaggatca 219
                |||||||||||| |||||  ||||||||||| | ||  || |  |||||||| |  ||||
Sbjct: 33624939 gcttgaacacaaagtacagtgggctgtagaacaagaagcacaggccaaaaggaacaatca 33624998

                                                                            
Query: 220      tcatggttagtagccctctcgacagcgcatacgccccttgtgctgatccgttggcgatgt 279
                |||| || | |||||| ||||| || ||||||||||||  | | ||||| ||  | |  |
Sbjct: 33624999 tcattgtcaatagccccctcgagagtgcatacgcccctgctaccgatccattttccagat 33625058

                                                                            
Query: 280      ttacagtcttggcgtcatagccatatatcttctcagtgaccaagccgacagcaggagcag 339
                | || ||||| ||||  |||||||| |||||||||||||||| ||| |||||||||||||
Sbjct: 33625059 tgacggtctttgcgttgtagccatagatcttctcagtgaccatgccaacagcaggagcag 33625118

                                                                            
Query: 340      ccaatgaggcaaacgagccctcaaaagcccggtcaaaggcgtagatcatggtgcggtgct 399
                |||  |||||||| || ||||| || || ||||| ||||| |||||||| ||||||||||
Sbjct: 33625119 ccagggaggcaaatgaaccctcgaacgcgcggtcgaaggcatagatcatcgtgcggtgct 33625178

                                                                            
Query: 400      tgggagggactacctccgcaaacatggggttgtttgccgaagtagcacaccagctgatgg 459
                |||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||
Sbjct: 33625179 tgggagggactacctccgcaaacatggggttgtttgcgcaagtagcgcaccagctgatgg 33625238

                                                                            
Query: 460      tgatgcccatgaagaagagtgtgacggcataggcaaaccagtagtcagttgactgangaa 519
                | || ||||| |||||||| ||||| ||| | ||| ||||||||||   ||||||| |||
Sbjct: 33625239 taatccccatcaagaagagagtgacagcaaaagcagaccagtagtcgactgactgaggaa 33625298

                               
Query: 520      tgacagtgaggagga 534
                |||| || |||||||
Sbjct: 33625299 tgactgtaaggagga 33625313



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>dbj|AK070392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049P03, full
            insert sequence
          Length = 1928

 Score =  238 bits (120), Expect = 2e-59
 Identities = 311/375 (82%)
 Strand = Plus / Minus

                                                                        
Query: 160  gcttgaacacaaggtacaaagggctgtagaataggacacagataccaaaagggaggatca 219
            |||||||||||| |||||  ||||||||||| | ||  || |  |||||||| |  ||||
Sbjct: 1517 gcttgaacacaaagtacagtgggctgtagaacaagaagcacaggccaaaaggaacaatca 1458

                                                                        
Query: 220  tcatggttagtagccctctcgacagcgcatacgccccttgtgctgatccgttggcgatgt 279
            |||| || | |||||| ||||| || ||||||||||||  | | ||||| ||  | |  |
Sbjct: 1457 tcattgtcaatagccccctcgagagtgcatacgcccctgctaccgatccattttccagat 1398

                                                                        
Query: 280  ttacagtcttggcgtcatagccatatatcttctcagtgaccaagccgacagcaggagcag 339
            | || ||||| ||||  |||||||| |||||||||||||||| ||| |||||||||||||
Sbjct: 1397 tgacggtctttgcgttgtagccatagatcttctcagtgaccatgccaacagcaggagcag 1338

                                                                        
Query: 340  ccaatgaggcaaacgagccctcaaaagcccggtcaaaggcgtagatcatggtgcggtgct 399
            |||  |||||||| || ||||| || || ||||| ||||| |||||||| ||||||||||
Sbjct: 1337 ccagggaggcaaatgaaccctcgaacgcgcggtcgaaggcatagatcatcgtgcggtgct 1278

                                                                        
Query: 400  tgggagggactacctccgcaaacatggggttgtttgccgaagtagcacaccagctgatgg 459
            |||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||
Sbjct: 1277 tgggagggactacctccgcaaacatggggttgtttgcgcaagtagcgcaccagctgatgg 1218

                                                                        
Query: 460  tgatgcccatgaagaagagtgtgacggcataggcaaaccagtagtcagttgactgangaa 519
            | || ||||| |||||||| ||||| ||| | ||| ||||||||||   ||||||| |||
Sbjct: 1217 taatccccatcaagaagagagtgacagcaaaagcagaccagtagtcgactgactgaggaa 1158

                           
Query: 520  tgacagtgaggagga 534
            |||| || |||||||
Sbjct: 1157 tgactgtaaggagga 1143



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>gb|M22207.1|SUT217G T.gratilla 217g gene encoding 217g protein, complete cds
          Length = 4702

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 454  tgatggtgatgcccatgaagaagag 478
            |||||||||||||||||||||||||
Sbjct: 3161 tgatggtgatgcccatgaagaagag 3185



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>ref|NM_119843.2| Arabidopsis thaliana carbohydrate transporter/ sugar porter/
            transporter AT4G36790 mRNA, complete cds
          Length = 1725

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 363  aaagcccggtcaaaggcgtagatcatggtgcggtgcttgggagggactacctccgcaaac 422
            ||||| |||||||| ||||||||||| || |||||| | ||||| || || || ||||||
Sbjct: 1399 aaagcacggtcaaacgcgtagatcattgtacggtgccttggaggaacgacttctgcaaac 1340

              
Query: 423  at 424
            ||
Sbjct: 1339 at 1338



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>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2
          Length = 198354

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 363   aaagcccggtcaaaggcgtagatcatggtgcggtgcttgggagggactacctccgcaaac 422
             ||||| |||||||| ||||||||||| || |||||| | ||||| || || || ||||||
Sbjct: 31372 aaagcacggtcaaacgcgtagatcattgtacggtgccttggaggaacgacttctgcaaac 31431

               
Query: 423   at 424
             ||
Sbjct: 31432 at 31433



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>gb|AY122924.1| Arabidopsis thaliana unknown protein (At4g36790) mRNA, complete cds
          Length = 1501

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 363  aaagcccggtcaaaggcgtagatcatggtgcggtgcttgggagggactacctccgcaaac 422
            ||||| |||||||| ||||||||||| || |||||| | ||||| || || || ||||||
Sbjct: 1211 aaagcacggtcaaacgcgtagatcattgtacggtgccttggaggaacgacttctgcaaac 1152

              
Query: 423  at 424
            ||
Sbjct: 1151 at 1150



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>gb|AY063899.1| Arabidopsis thaliana unknown protein (At4g36790) mRNA, complete cds
          Length = 1643

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 363  aaagcccggtcaaaggcgtagatcatggtgcggtgcttgggagggactacctccgcaaac 422
            ||||| |||||||| ||||||||||| || |||||| | ||||| || || || ||||||
Sbjct: 1298 aaagcacggtcaaacgcgtagatcattgtacggtgccttggaggaacgacttctgcaaac 1239

              
Query: 423  at 424
            ||
Sbjct: 1238 at 1237



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>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86
          Length = 198780

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 363   aaagcccggtcaaaggcgtagatcatggtgcggtgcttgggagggactacctccgcaaac 422
             ||||| |||||||| ||||||||||| || |||||| | ||||| || || || ||||||
Sbjct: 25606 aaagcacggtcaaacgcgtagatcattgtacggtgccttggaggaacgacttctgcaaac 25547

               
Query: 423   at 424
             ||
Sbjct: 25546 at 25545



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>emb|BX828097.1|CNS0A31Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH52ZB02 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1528

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 363  aaagcccggtcaaaggcgtagatcatggtgcggtgcttgggagggactacctccgcaaac 422
            ||||| |||||||| ||||||||||| || |||||| | ||||| || || || ||||||
Sbjct: 1271 aaagcacggtcaaacgcgtagatcattgtacggtgccttggaggaacgacttctgcaaac 1212

              
Query: 423  at 424
            ||
Sbjct: 1211 at 1210



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>emb|BX827767.1|CNS0A2ZM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH1ZE08 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1580

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 363  aaagcccggtcaaaggcgtagatcatggtgcggtgcttgggagggactacctccgcaaac 422
            ||||| |||||||| ||||||||||| || |||||| | ||||| || || || ||||||
Sbjct: 1316 aaagcacggtcaaacgcgtagatcattgtacggtgccttggaggaacgacttctgcaaac 1257

              
Query: 423  at 424
            ||
Sbjct: 1256 at 1255



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>emb|BX826852.1|CNS0A356 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB69ZD02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1355

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 363  aaagcccggtcaaaggcgtagatcatggtgcggtgcttgggagggactacctccgcaaac 422
            ||||| |||||||| ||||||||||| || |||||| | ||||| || || || ||||||
Sbjct: 1008 aaagcacggtcaaacgcgtagatcattgtacggtgccttggaggaacgacttctgcaaac 949

              
Query: 423  at 424
            ||
Sbjct: 948  at 947



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>emb|BX005415.5| Zebrafish DNA sequence from clone DKEY-21I5 in linkage group 5, complete
              sequence
          Length = 243510

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 65     tgaatccttatcagaaacatca 86
              ||||||||||||||||||||||
Sbjct: 102067 tgaatccttatcagaaacatca 102088



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>emb|BX004981.4| Zebrafish DNA sequence from clone CH211-169J7 in linkage group 7,
             complete sequence
          Length = 162525

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 65    tgaatccttatcagaaacatca 86
             ||||||||||||||||||||||
Sbjct: 50606 tgaatccttatcagaaacatca 50627



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>ref|NM_105952.3| Arabidopsis thaliana transmembrane receptor AT1G72940 mRNA,
           complete cds
          Length = 1525

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  cttgaatccttatcagaaac 82
           ||||||||||||||||||||
Sbjct: 836 cttgaatccttatcagaaac 817



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>gb|AY768346.1| Hepatitis C virus isolate 53416-R core E1 gene, partial sequence
          Length = 369

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 154 tgtcatgcttgaacacaaggtaca 177
           ||||| ||||||||||||||||||
Sbjct: 147 tgtcaggcttgaacacaaggtaca 124



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>gb|AY617673.1| Sterkiella histriomuscorum clone UGC1O0004_F20_R genomic sequence
          Length = 643

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 36  atttacaattacatcaatac 55
           ||||||||||||||||||||
Sbjct: 96  atttacaattacatcaatac 115



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>ref|XM_865628.1| PREDICTED: Bos taurus similar to Retinol dehydrogenase 11 (Retinal
            reductase 1) (RalR1) (Prostate short-chain
            dehydrogenase/reductase 1) (Androgen-regulated
            short-chain dehydrogenase/reductase 1) (HCV core-binding
            protein HCBP12), transcript variant 2 (LOC505995), mRNA
          Length = 2668

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  tcatgcttgaacacaaggta 175
            ||||||||||||||||||||
Sbjct: 2042 tcatgcttgaacacaaggta 2023



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>ref|XM_582373.2| PREDICTED: Bos taurus similar to Retinol dehydrogenase 11 (Retinal
            reductase 1) (RalR1) (Prostate short-chain
            dehydrogenase/reductase 1) (Androgen-regulated
            short-chain dehydrogenase/reductase 1) (HCV core-binding
            protein HCBP12), transcript variant 1 (LOC505995), mRNA
          Length = 2650

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  tcatgcttgaacacaaggta 175
            ||||||||||||||||||||
Sbjct: 2024 tcatgcttgaacacaaggta 2005



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>gb|AY149960.1| Arabidopsis thaliana At1g72940/F3N23_14 mRNA, complete cds
          Length = 1116

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  cttgaatccttatcagaaac 82
           ||||||||||||||||||||
Sbjct: 796 cttgaatccttatcagaaac 777



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>emb|Y08085.1|HSMXAF139 Hyphomicrobium sp. mxaF gene, partial, strain IFAM 1391
          Length = 553

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 460 tgatgcccatgaagaagagt 479
           ||||||||||||||||||||
Sbjct: 520 tgatgcccatgaagaagagt 501



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>emb|Y08076.1|HSMXAF520 Hyphomicrobium sp. mxaF gene, partial, strain B 520
          Length = 541

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 460 tgatgcccatgaagaagagt 479
           ||||||||||||||||||||
Sbjct: 511 tgatgcccatgaagaagagt 492



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>emb|Y08074.1|HSMXAF69 Hyphomicrobium sp. mxaF gene, partial, strain B 69
          Length = 546

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 460 tgatgcccatgaagaagagt 479
           ||||||||||||||||||||
Sbjct: 513 tgatgcccatgaagaagagt 494



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>emb|Y08083.1|HHMXAF H.hollandicum mxaF gene, partial
          Length = 544

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 460 tgatgcccatgaagaagagt 479
           ||||||||||||||||||||
Sbjct: 511 tgatgcccatgaagaagagt 492



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>emb|Y08080.1|HZMXAF H.zavarzinii mxaF gene, partial
          Length = 540

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 460 tgatgcccatgaagaagagt 479
           ||||||||||||||||||||
Sbjct: 512 tgatgcccatgaagaagagt 493



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>emb|Y08070.1|HVMXAF H.vulgare mxaF gene, partial
          Length = 547

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 460 tgatgcccatgaagaagagt 479
           ||||||||||||||||||||
Sbjct: 514 tgatgcccatgaagaagagt 495



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>gb|AC162301.3| Mus musculus chromosome 15, clone RP24-282H6, complete sequence
          Length = 171176

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     ctctgatttacaattacatc 50
              ||||||||||||||||||||
Sbjct: 105222 ctctgatttacaattacatc 105203



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>emb|AJ248285.1|CNSPAX03 Pyrococcus abyssi complete genome; segment 3/6
          Length = 307120

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   taccttggcattgtccctgt 156
             ||||||||||||||||||||
Sbjct: 55219 taccttggcattgtccctgt 55238



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>gb|AC165446.16| Medicago truncatula clone mth2-61p21, complete sequence
          Length = 135557

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 274    cgatgtttacagtcttggcgtcat 297
              ||||||||||||||| ||||||||
Sbjct: 115739 cgatgtttacagtctcggcgtcat 115716



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>gb|AY064998.1| Arabidopsis thaliana At1g72940/F3N23_14 mRNA, complete cds
          Length = 1413

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  cttgaatccttatcagaaac 82
           ||||||||||||||||||||
Sbjct: 836 cttgaatccttatcagaaac 817



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>emb|BX813603.1|CNS0ACAH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB27ZE05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1290

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  cttgaatccttatcagaaac 82
           ||||||||||||||||||||
Sbjct: 804 cttgaatccttatcagaaac 785



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>emb|BX817099.1|CNS0ABWC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH85ZE07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1353

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  cttgaatccttatcagaaac 82
           ||||||||||||||||||||
Sbjct: 814 cttgaatccttatcagaaac 795



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>emb|BX816156.1|CNS0ABXN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH31ZB09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1343

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  cttgaatccttatcagaaac 82
           ||||||||||||||||||||
Sbjct: 823 cttgaatccttatcagaaac 804



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>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    cttgaatccttatcagaaac 82
             ||||||||||||||||||||
Sbjct: 45739 cttgaatccttatcagaaac 45720


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,133,584
Number of Sequences: 3902068
Number of extensions: 4133584
Number of successful extensions: 77743
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77588
Number of HSP's gapped (non-prelim): 151
length of query: 534
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 511
effective length of database: 17,143,297,704
effective search space: 8760225126744
effective search space used: 8760225126744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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