ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63e23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, compl... 672 0.0
2ref|NM_192260.1| Oryza sativa (japonica cultivar-group), predic... 115 1e-22
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
4dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
5dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
6dbj|AK099825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
7dbj|AK060890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
8gb|AF182806.1|AF182806 Oryza sativa carbonic anhydrase 3 mRNA, c... 115 1e-22
9gb|U08404.1|OSU08404 Oryza sativa chloroplast carbonic anhydrase... 115 1e-22
10dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, comple... 115 1e-22
11gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mR... 86 1e-13
12gb|U19739.1|UPU19739 Urochloa panicoides carbonic anhydrase 2 mR... 82 1e-12
13gb|AY109272.1| Zea mays PCO064414 mRNA sequence 72 1e-09
14gb|AY109373.1| Zea mays CL2331_1 mRNA sequence 58 2e-05
15gb|U08403.1|ZMU08403 Zea mays Golden Bantam carbonic anhydrase m... 58 2e-05
16gb|U08401.1|ZMU08401 Zea mays carbonic anhydrase mRNA, complete cds 58 2e-05
17gb|M95073.1|MZEORFN Zea mays putative carbonic anhydrase homolog... 58 2e-05
18dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.3
19ref|XM_467687.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.1
20ref|NM_196639.1| Oryza sativa (japonica cultivar-group) hypothet... 40 5.1
21gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6... 40 5.1
22emb|AL079341.19|HSDJ319M7 Human DNA sequence from clone RP1-319M... 40 5.1
23gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
25dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
26dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
27gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, compl... 40 5.1
28dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 5.1
29dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
30dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
31dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
32dbj|AK108113.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
33emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.1
34gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1 
>gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds
          Length = 1529

 Score =  672 bits (339), Expect = 0.0
 Identities = 369/381 (96%), Gaps = 1/381 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    taaacttatatatgatgtctttcgatn-caagacgattaaattatgcatcacatagcagt 59
            ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||
Sbjct: 1471 taaacttatatatgatgtctttcgatcacaagacgatcaaattatgcatcacatagcagt 1412

                                                                        
Query: 60   acaattcctcgtcagaaaatggtgaagnnnnnnnggttctattgcttatggcaaattcac 119
            |||||||||||||||||||||||||||       ||||||||||||||||||||||||||
Sbjct: 1411 acaattcctcgtcagaaaatggtgaagaaaaaaaggttctattgcttatggcaaattcac 1352

                                                                        
Query: 120  atcgggccatccggcatccagtactggacaataacgggtacgcactcccatggcattgca 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1351 atcgggccatccggcatccagtactggacaataacgggtacgcactcccatggcattgca 1292

                                                                        
Query: 180  ttcacatcgatcggacgatatcttgatatatgtacgtttgtatatgtcggagttaaccgg 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 ttcacatcgatcggacgatatcttgatatatgtacgtttgtatatgtcggagttaaccgg 1232

                                                                        
Query: 240  tggggaagatttactgctcccatgtttcgaacttgccggagacnaagtcgtagtggccgc 299
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1231 tggggaagatttactgctcccatgtttcgaacttgccggagacgaagtcgtagtggccgc 1172

                                                                        
Query: 300  cgacgagcttgagggttccgttggtcacaccctccttgacgaacgggtaggtcaagaggt 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 cgacgagcttgagggttccgttggtcacaccctccttgacgaacgggtaggtcaagaggt 1112

                                 
Query: 360  tntggagggacacgttgacgg 380
            | |||||||||||||||||||
Sbjct: 1111 tctggagggacacgttgacgg 1091
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>ref|NM_192260.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 819

 Score =  115 bits (58), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                       
Query: 272 ttgccggagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 331
           ||||||||||| |||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 797 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 738

                                
Query: 332 tccttgacgaacgggtaggtc 352
           |||||||||||||||||||||
Sbjct: 737 tccttgacgaacgggtaggtc 717
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  115 bits (58), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                            
Query: 272      ttgccggagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 331
                ||||||||||| |||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 25698466 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 25698407

                                     
Query: 332      tccttgacgaacgggtaggtc 352
                |||||||||||||||||||||
Sbjct: 25698406 tccttgacgaacgggtaggtc 25698386
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>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0004A09
          Length = 158826

 Score =  115 bits (58), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                          
Query: 272    ttgccggagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 331
              ||||||||||| |||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 145272 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 145213

                                   
Query: 332    tccttgacgaacgggtaggtc 352
              |||||||||||||||||||||
Sbjct: 145212 tccttgacgaacgggtaggtc 145192
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>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           PAC clone:P0039G05
          Length = 138429

 Score =  115 bits (58), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                       
Query: 272 ttgccggagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 331
           ||||||||||| |||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 930 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 871

                                
Query: 332 tccttgacgaacgggtaggtc 352
           |||||||||||||||||||||
Sbjct: 870 tccttgacgaacgggtaggtc 850
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>dbj|AK099825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102G17, full
           insert sequence
          Length = 1163

 Score =  115 bits (58), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                       
Query: 272 ttgccggagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 331
           ||||||||||| |||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 847 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 788

                                
Query: 332 tccttgacgaacgggtaggtc 352
           |||||||||||||||||||||
Sbjct: 787 tccttgacgaacgggtaggtc 767
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>dbj|AK060890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B12, full
           insert sequence
          Length = 1165

 Score =  115 bits (58), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                       
Query: 272 ttgccggagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 331
           ||||||||||| |||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 846 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 787

                                
Query: 332 tccttgacgaacgggtaggtc 352
           |||||||||||||||||||||
Sbjct: 786 tccttgacgaacgggtaggtc 766
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>gb|AF182806.1|AF182806 Oryza sativa carbonic anhydrase 3 mRNA, complete cds
          Length = 1169

 Score =  115 bits (58), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                       
Query: 272 ttgccggagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 331
           ||||||||||| |||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 841 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 782

                                
Query: 332 tccttgacgaacgggtaggtc 352
           |||||||||||||||||||||
Sbjct: 781 tccttgacgaacgggtaggtc 761
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>gb|U08404.1|OSU08404 Oryza sativa chloroplast carbonic anhydrase mRNA, complete cds
          Length = 1148

 Score =  115 bits (58), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                       
Query: 272 ttgccggagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 331
           ||||||||||| |||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 832 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 773

                                
Query: 332 tccttgacgaacgggtaggtc 352
           |||||||||||||||||||||
Sbjct: 772 tccttgacgaacgggtaggtc 752
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>dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, complete cds
          Length = 8532

 Score =  115 bits (58), Expect = 1e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                        
Query: 272  ttgccggagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 331
            ||||||||||| |||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 8047 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 7988

                                 
Query: 332  tccttgacgaacgggtaggtc 352
            |||||||||||||||||||||
Sbjct: 7987 tccttgacgaacgggtaggtc 7967
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>gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mRNA, complete cds
          Length = 1208

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                       
Query: 280 gacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttgac 339
           ||| |||||||||||||||||||| ||||||||||  ||||||| |||||| ||||| ||
Sbjct: 864 gacgaagtcgtagtggccgccgaccagcttgagggagccgttggacacaccttccttcac 805

                                                    
Query: 340 gaacgggtaggtcaagaggttntggagggacacgttgacgg 380
             | |||||||||| |||||| |  ||||| ||||||||||
Sbjct: 804 ccaggggtaggtcaggaggttgtacagggagacgttgacgg 764
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>gb|U19739.1|UPU19739 Urochloa panicoides carbonic anhydrase 2 mRNA, complete cds
          Length = 1034

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                       
Query: 280 gacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttgac 339
           ||| |||||||||||||||||||| ||||||||||  ||||||| ||| || ||||| ||
Sbjct: 703 gacgaagtcgtagtggccgccgaccagcttgagggacccgttggacacgccttccttcac 644

                                                  
Query: 340 gaacgggtaggtcaagaggttntggagggacacgttgac 378
             | |||||||||| |||||| | |||||| ||||||||
Sbjct: 643 ccaggggtaggtcaggaggttgtagagggagacgttgac 605
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>gb|AY109272.1| Zea mays PCO064414 mRNA sequence
          Length = 978

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 88/106 (83%)
 Strand = Plus / Minus

                                                                       
Query: 275 ccggagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctcc 334
           ||||| || |||||||||||| ||||||| ||||||||||| || |||| ||  || |||
Sbjct: 719 ccggacacgaagtcgtagtgggcgccgaccagcttgagggtccccttggccagcccttcc 660

                                                         
Query: 335 ttgacgaacgggtaggtcaagaggttntggagggacacgttgacgg 380
           | |||||| |||||||||  |||||| |  ||||||||||| ||||
Sbjct: 659 tggacgaaggggtaggtcttgaggttctccagggacacgttcacgg 614
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>gb|AY109373.1| Zea mays CL2331_1 mRNA sequence
          Length = 2552

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                        
Query: 278  gagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 337
            ||||| |||||||||||| ||||||  ||||||||||| || || |  |  || ||||||
Sbjct: 1610 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1551

                                                       
Query: 338  acgaacgggtaggtcaagaggttntggagggacacgttgacgg 380
            ||||| |||||||||  |||||| |  ||||||||||| ||||
Sbjct: 1550 acgaaggggtaggtcttgaggttctccagggacacgttcacgg 1508
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>gb|U08403.1|ZMU08403 Zea mays Golden Bantam carbonic anhydrase mRNA, complete cds
          Length = 2184

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                        
Query: 278  gagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 337
            ||||| |||||||||||| ||||||  ||||||||||| || || |  |  || ||||||
Sbjct: 1934 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1875

                                                       
Query: 338  acgaacgggtaggtcaagaggttntggagggacacgttgacgg 380
            ||||| |||||||||  |||||| |  ||||||||||| ||||
Sbjct: 1874 acgaaggggtaggtcttgaggttctccagggacacgttcacgg 1832



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 332 tccttgacgaacgggtaggtcaagaggttntggagggacacgttgacgg 380
           ||||||||||| |||||| ||  |||||| ||||| |||||||| ||||
Sbjct: 671 tccttgacgaaggggtagctcttgaggttctggagcgacacgttcacgg 623
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>gb|U08401.1|ZMU08401 Zea mays carbonic anhydrase mRNA, complete cds
          Length = 1920

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                        
Query: 278  gagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 337
            ||||| |||||||||||| ||||||  ||||||||||| || || |  |  || ||||||
Sbjct: 1610 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1551

                                                       
Query: 338  acgaacgggtaggtcaagaggttntggagggacacgttgacgg 380
            ||||| |||||||||  |||||| |  ||||||||||| ||||
Sbjct: 1550 acgaaggggtaggtcttgaggttctccagggacacgttcacgg 1508



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 332 tccttgacgaacgggtaggtcaagaggttntggagggacacgttgacgg 380
           ||||||||||| |||||| ||  |||||| ||||| |||||||| ||||
Sbjct: 950 tccttgacgaaggggtagctcttgaggttctggagcgacacgttcacgg 902
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>gb|M95073.1|MZEORFN Zea mays putative carbonic anhydrase homolog mRNA, partial cds
          Length = 210

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                       
Query: 278 gagacnaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 337
           ||||| |||||||||||| ||||||  ||||||||||| || || |  |  || ||||||
Sbjct: 171 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 112

                                                      
Query: 338 acgaacgggtaggtcaagaggttntggagggacacgttgacgg 380
           ||||| |||||||||  |||||| |  ||||||||||| ||||
Sbjct: 111 acgaaggggtaggtcttgaggttctccagggacacgttcacgg 69
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>dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-212D19, complete
             sequence
          Length = 138197

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 206   tatatgtacgtttgtatatgt 226
             |||||||||||||||||||||
Sbjct: 80852 tatatgtacgtttgtatatgt 80872
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>ref|XM_467687.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1138

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 294 ggccgccgacgagcttgagg 313
           ||||||||||||||||||||
Sbjct: 102 ggccgccgacgagcttgagg 121
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>ref|NM_196639.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0019M20.11), mRNA
          Length = 642

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 294 ggccgccgacgagcttgagg 313
           ||||||||||||||||||||
Sbjct: 189 ggccgccgacgagcttgagg 208
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>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete
              sequence
          Length = 252420

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 203    tgatatatgtacgtttgtatatgt 226
              |||||||||||| |||||||||||
Sbjct: 127219 tgatatatgtacatttgtatatgt 127196
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>emb|AL079341.19|HSDJ319M7 Human DNA sequence from clone RP1-319M7 on chromosome 6p21.1-21.3
             Contains the 5' end of the gene for a novel protein
             (contains KIAA1880 and FLJ32945), a TRK-fused gene (TFG)
             pseudogene and a CpG island, complete sequence
          Length = 128216

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    ttctattgcttatggcaaat 115
             ||||||||||||||||||||
Sbjct: 55862 ttctattgcttatggcaaat 55881
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>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20,
              complete sequence
          Length = 139421

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    ggccgccgacgagcttgagg 313
              ||||||||||||||||||||
Sbjct: 110220 ggccgccgacgagcttgagg 110239
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 294      ggccgccgacgagcttgagg 313
                ||||||||||||||||||||
Sbjct: 14930442 ggccgccgacgagcttgagg 14930461
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 294      ggccgccgacgagcttgagg 313
                ||||||||||||||||||||
Sbjct: 28350077 ggccgccgacgagcttgagg 28350096
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 294      ggccgccgacgagcttgagg 313
                ||||||||||||||||||||
Sbjct: 30832078 ggccgccgacgagcttgagg 30832097
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>gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, complete sequence
          Length = 189466

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    atatatgtacgtttgtatat 224
              ||||||||||||||||||||
Sbjct: 169067 atatatgtacgtttgtatat 169048
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      aacttatatatgatgtcttt 22
              ||||||||||||||||||||
Sbjct: 320903 aacttatatatgatgtcttt 320922
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>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0661G04
          Length = 157292

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   ggccgccgacgagcttgagg 313
             ||||||||||||||||||||
Sbjct: 62655 ggccgccgacgagcttgagg 62674
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>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0623A10
          Length = 156517

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    ggccgccgacgagcttgagg 313
              ||||||||||||||||||||
Sbjct: 148106 ggccgccgacgagcttgagg 148125
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>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0684F11
          Length = 147731

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   ggccgccgacgagcttgagg 313
             ||||||||||||||||||||
Sbjct: 15655 ggccgccgacgagcttgagg 15674
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>dbj|AK108113.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-C02, full
           insert sequence
          Length = 1138

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 294 ggccgccgacgagcttgagg 313
           ||||||||||||||||||||
Sbjct: 102 ggccgccgacgagcttgagg 121
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   ggccgccgacgagcttgagg 313
             ||||||||||||||||||||
Sbjct: 59918 ggccgccgacgagcttgagg 59937
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 294      ggccgccgacgagcttgagg 313
                ||||||||||||||||||||
Sbjct: 14938683 ggccgccgacgagcttgagg 14938702


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,071,007
Number of Sequences: 3902068
Number of extensions: 2071007
Number of successful extensions: 31242
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31091
Number of HSP's gapped (non-prelim): 149
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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