Clone Name | rbah63f15 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12 | 30 | 2.3 | 2 | UL84_HCMVA (P16727) 65 kDa early nonstructural protein (UL84 pro... | 28 | 6.5 | 3 | UL84_HCMVT (P29839) 65 kDa early nonstructural protein (UL84 pro... | 28 | 6.5 |
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>TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12| Length = 586 Score = 29.6 bits (65), Expect = 2.3 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = -3 Query: 141 WNQIESAPTSSPPLLIQDLHT*GHPCMIC 55 W + P PP+ +Q LHT H +IC Sbjct: 263 WTVTSNVPNKEPPISVQLLHTLEHTSVIC 291
>UL84_HCMVA (P16727) 65 kDa early nonstructural protein (UL84 protein)| Length = 586 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -2 Query: 157 RPACNLEPNRVGTYVLAAVIDPRLT 83 RPA +L P R G ++L +VID +LT Sbjct: 197 RPAFSLFPARPGCHILRSVIDQQLT 221
>UL84_HCMVT (P29839) 65 kDa early nonstructural protein (UL84 protein)| Length = 587 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -2 Query: 157 RPACNLEPNRVGTYVLAAVIDPRLT 83 RPA +L P R G ++L +VID +LT Sbjct: 198 RPAFSLFPARPGCHILRSVIDQQLT 222 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,145,302 Number of Sequences: 219361 Number of extensions: 482123 Number of successful extensions: 1079 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1060 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1079 length of database: 80,573,946 effective HSP length: 44 effective length of database: 70,922,062 effective search space used: 1702129488 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)