Clone Name | rbah63g17 |
---|---|
Clone Library Name | barley_pub |
>emb|X52384.1|ZMPK1 Maize mRNA for putative protein kinase Length = 2693 Score = 113 bits (57), Expect = 8e-22 Identities = 168/205 (81%) Strand = Plus / Minus Query: 463 ccaactctgaaactcttgtcccagataaaagctcaagcaaaacaactccgtaactataaa 522 |||||||||||||||| || || | || ||||| || | ||||| || ||||| || | Sbjct: 2218 ccaactctgaaactctggtgcctgtcaatagctccagtagcacaaccccataactgtata 2159 Query: 523 catcgactttcgccgtgattgggaggcttgaaacccactcaggagctatgtaacctatcg 582 |||||||||| || ||||| |||||||| |||||||||||||| || |||||||||| || Sbjct: 2158 catcgacttttgctgtgatcgggaggctggaaacccactcaggtgcaatgtaacctagcg 2099 Query: 583 ttcctcgcacctgcgacatgttctgtgtggctccgcctctgtttagtaactttgtcaacc 642 |||||| || || || | |||||| |||| || |||||||| || ||||| ||||| Sbjct: 2098 ttcctctgacatgggatacgttctgggtggaccctcctctgttcagcaacttcaccaacc 2039 Query: 643 caaagtcagtgatcttaggctcaaa 667 |||||||||||||||| |||||||| Sbjct: 2038 caaagtcagtgatcttgggctcaaa 2014 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 233 caggagagtctggactacagattccatggttggcctcttgtttctgtcttcctgcaggca 292 |||||| ||||||||| || |||||| || || || ||| |||||||||||| || ||| Sbjct: 2445 caggagggtctggactgcatgttccatagtcggtcttttgcttctgtcttcctccaagca 2386 Query: 293 ggaaacagccaacttgatcattgttcttgcttggacatag 332 ||| || ||||| ||||||| |||||||||||| |||||| Sbjct: 2385 ggagaccgccaatttgatcagtgttcttgcttgcacatag 2346
>emb|X67733.1|ZMPK1A Z.mays PK1 gene for receptor-like protein kinase Length = 4487 Score = 113 bits (57), Expect = 8e-22 Identities = 168/205 (81%) Strand = Plus / Minus Query: 463 ccaactctgaaactcttgtcccagataaaagctcaagcaaaacaactccgtaactataaa 522 |||||||||||||||| || || | || ||||| || | ||||| || ||||| || | Sbjct: 3938 ccaactctgaaactctggtgcctgtcaatagctccagtagcacaaccccataactgtata 3879 Query: 523 catcgactttcgccgtgattgggaggcttgaaacccactcaggagctatgtaacctatcg 582 |||||||||| || ||||| |||||||| |||||||||||||| || |||||||||| || Sbjct: 3878 catcgacttttgctgtgatcgggaggctggaaacccactcaggtgcaatgtaacctagcg 3819 Query: 583 ttcctcgcacctgcgacatgttctgtgtggctccgcctctgtttagtaactttgtcaacc 642 |||||| || || || | |||||| |||| || |||||||| || ||||| ||||| Sbjct: 3818 ttcctctgacatgggatacgttctgggtggaccctcctctgttcagcaacttcaccaacc 3759 Query: 643 caaagtcagtgatcttaggctcaaa 667 |||||||||||||||| |||||||| Sbjct: 3758 caaagtcagtgatcttgggctcaaa 3734 Score = 71.9 bits (36), Expect = 3e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 233 caggagagtctggactacagattccatggttggcctcttgtttctgtcttcctgcaggca 292 |||||| ||||||||| || |||||| || || || ||| |||||||||||| || ||| Sbjct: 4165 caggagggtctggactgcatgttccatagtcggtcttttgcttctgtcttcctccaagca 4106 Query: 293 ggaaacagccaacttgatcattgttcttgcttggacatag 332 ||| || ||||| ||||||| |||||||||||| |||||| Sbjct: 4105 ggagaccgccaatttgatcagtgttcttgcttgcacatag 4066
>gb|AY111028.1| Zea mays CL1194_1 mRNA sequence Length = 2693 Score = 113 bits (57), Expect = 8e-22 Identities = 168/205 (81%) Strand = Plus / Plus Query: 463 ccaactctgaaactcttgtcccagataaaagctcaagcaaaacaactccgtaactataaa 522 |||||||||||||||| || || | || ||||| || | ||||| || ||||| || | Sbjct: 476 ccaactctgaaactctggtgcctgtcaatagctccagtagcacaaccccataactgtata 535 Query: 523 catcgactttcgccgtgattgggaggcttgaaacccactcaggagctatgtaacctatcg 582 |||||||||| || ||||| |||||||| |||||||||||||| || |||||||||| || Sbjct: 536 catcgacttttgctgtgatcgggaggctggaaacccactcaggtgcaatgtaacctagcg 595 Query: 583 ttcctcgcacctgcgacatgttctgtgtggctccgcctctgtttagtaactttgtcaacc 642 |||||| || || || | |||||| |||| || |||||||| || ||||| ||||| Sbjct: 596 ttcctctgacatgggatacgttctgggtggaccctcctctgttcagcaacttcaccaacc 655 Query: 643 caaagtcagtgatcttaggctcaaa 667 |||||||||||||||| |||||||| Sbjct: 656 caaagtcagtgatcttgggctcaaa 680 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 290 gcaggaaacagccaacttgatcattgttcttgcttggacatag 332 |||||| || ||||| ||||||| |||||||||||| |||||| Sbjct: 306 gcaggagaccgccaatttgatcagtgttcttgcttgcacatag 348
>ref|XM_468732.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2367 Score = 71.9 bits (36), Expect = 3e-09 Identities = 141/176 (80%) Strand = Plus / Minus Query: 492 agctcaagcaaaacaactccgtaactataaacatcgactttcgccgtgattgggaggctt 551 |||||||||| |||||||| || ||||| ||||| ||||| || || ||| | ||||| Sbjct: 2138 agctcaagcagcacaactccatagctatacacatcaacttttgcagtaatttgcaggctg 2079 Query: 552 gaaacccactcaggagctatgtaacctatcgttcctcgcacctgcgacatgttctgtgtg 611 | |||||| ||||| ||||||||||| || |||||||| | |||| ||| || || Sbjct: 2078 ctgatccactctggagcaatgtaacctatggtccctcgcactcgagacacgttttgattg 2019 Query: 612 gctccgcctctgtttagtaactttgtcaacccaaagtcagtgatcttaggctcaaa 667 | |||||||||||||| | ||| | |||||||||||| | ||||||||||||||| Sbjct: 2018 gacccgcctctgtttaggagcttcgccaacccaaagtccgcgatcttaggctcaaa 1963
>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19 map E30331S, complete sequence Length = 164820 Score = 71.9 bits (36), Expect = 3e-09 Identities = 141/176 (80%) Strand = Plus / Plus Query: 492 agctcaagcaaaacaactccgtaactataaacatcgactttcgccgtgattgggaggctt 551 |||||||||| |||||||| || ||||| ||||| ||||| || || ||| | ||||| Sbjct: 148445 agctcaagcagcacaactccatagctatacacatcaacttttgcagtaatttgcaggctg 148504 Query: 552 gaaacccactcaggagctatgtaacctatcgttcctcgcacctgcgacatgttctgtgtg 611 | |||||| ||||| ||||||||||| || |||||||| | |||| ||| || || Sbjct: 148505 ctgatccactctggagcaatgtaacctatggtccctcgcactcgagacacgttttgattg 148564 Query: 612 gctccgcctctgtttagtaactttgtcaacccaaagtcagtgatcttaggctcaaa 667 | |||||||||||||| | ||| | |||||||||||| | ||||||||||||||| Sbjct: 148565 gacccgcctctgtttaggagcttcgccaacccaaagtccgcgatcttaggctcaaa 148620
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 71.9 bits (36), Expect = 3e-09 Identities = 141/176 (80%) Strand = Plus / Minus Query: 492 agctcaagcaaaacaactccgtaactataaacatcgactttcgccgtgattgggaggctt 551 |||||||||| |||||||| || ||||| ||||| ||||| || || ||| | ||||| Sbjct: 17415298 agctcaagcagcacaactccatagctatacacatcaacttttgcagtaatttgcaggctg 17415239 Query: 552 gaaacccactcaggagctatgtaacctatcgttcctcgcacctgcgacatgttctgtgtg 611 | |||||| ||||| ||||||||||| || |||||||| | |||| ||| || || Sbjct: 17415238 ctgatccactctggagcaatgtaacctatggtccctcgcactcgagacacgttttgattg 17415179 Query: 612 gctccgcctctgtttagtaactttgtcaacccaaagtcagtgatcttaggctcaaa 667 | |||||||||||||| | ||| | |||||||||||| | ||||||||||||||| Sbjct: 17415178 gacccgcctctgtttaggagcttcgccaacccaaagtccgcgatcttaggctcaaa 17415123
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 71.9 bits (36), Expect = 3e-09 Identities = 141/176 (80%) Strand = Plus / Minus Query: 492 agctcaagcaaaacaactccgtaactataaacatcgactttcgccgtgattgggaggctt 551 |||||||||| |||||||| || ||||| ||||| ||||| || || ||| | ||||| Sbjct: 17408839 agctcaagcagcacaactccatagctatacacatcaacttttgcagtaatttgcaggctg 17408780 Query: 552 gaaacccactcaggagctatgtaacctatcgttcctcgcacctgcgacatgttctgtgtg 611 | |||||| ||||| ||||||||||| || |||||||| | |||| ||| || || Sbjct: 17408779 ctgatccactctggagcaatgtaacctatggtccctcgcactcgagacacgttttgattg 17408720 Query: 612 gctccgcctctgtttagtaactttgtcaacccaaagtcagtgatcttaggctcaaa 667 | |||||||||||||| | ||| | |||||||||||| | ||||||||||||||| Sbjct: 17408719 gacccgcctctgtttaggagcttcgccaacccaaagtccgcgatcttaggctcaaa 17408664
>dbj|AK101473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040L03, full insert sequence Length = 2664 Score = 71.9 bits (36), Expect = 3e-09 Identities = 141/176 (80%) Strand = Plus / Minus Query: 492 agctcaagcaaaacaactccgtaactataaacatcgactttcgccgtgattgggaggctt 551 |||||||||| |||||||| || ||||| ||||| ||||| || || ||| | ||||| Sbjct: 2182 agctcaagcagcacaactccatagctatacacatcaacttttgcagtaatttgcaggctg 2123 Query: 552 gaaacccactcaggagctatgtaacctatcgttcctcgcacctgcgacatgttctgtgtg 611 | |||||| ||||| ||||||||||| || |||||||| | |||| ||| || || Sbjct: 2122 ctgatccactctggagcaatgtaacctatggtccctcgcactcgagacacgttttgattg 2063 Query: 612 gctccgcctctgtttagtaactttgtcaacccaaagtcagtgatcttaggctcaaa 667 | |||||||||||||| | ||| | |||||||||||| | ||||||||||||||| Sbjct: 2062 gacccgcctctgtttaggagcttcgccaacccaaagtccgcgatcttaggctcaaa 2007
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 507 actccgtaactataaacatcgactttcgccgtgattgggaggcttgaaacccactcagga 566 ||||||||||| || ||||| |||||| | |||||||| ||||| ||||||||||||||| Sbjct: 56564 actccgtaactgtacacatcaactttctctgtgattggaaggctagaaacccactcagga 56505 Query: 567 gc 568 || Sbjct: 56504 gc 56503 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 503 aacaactccgtaactataaacatcgactttcgccgtgattgggaggcttgaaacccactc 562 ||||||||| |||||||| ||||| || ||| | ||||| || ||||| ||||||||||| Sbjct: 38411 aacaactccataactatatacatcaaccttctcggtgatcggaaggctagaaacccactc 38470 Query: 563 aggagc 568 |||||| Sbjct: 38471 aggagc 38476 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 632 ctttgtcaacccaaagtcagtgatcttagg 661 ||||| |||||||||||||||||||||||| Sbjct: 27660 ctttgccaacccaaagtcagtgatcttagg 27631 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 252 gattccatggttggcctcttgtttctgtcttcctgcaggcaggaaacagccaactt 307 |||||||| |||||||| || || || ||||||| || |||||| ||||||||||| Sbjct: 28043 gattccattgttggccttttcttcctatcttcctccaagcaggacacagccaactt 27988 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 642 ccaaagtcagtgatcttaggctc 664 ||||||||||||||||||||||| Sbjct: 56429 ccaaagtcagtgatcttaggctc 56407 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 257 catggttggcctcttgtttctgtcttcctgcaggcaggaaa 297 |||| |||||||||||||||| ||||| | |||||| |||| Sbjct: 38165 catgcttggcctcttgtttctatcttcttccaggcatgaaa 38205
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 507 actccgtaactataaacatcgactttcgccgtgattgggaggcttgaaacccactcagga 566 ||||||||||| || ||||| |||||| | |||||||| ||||| ||||||||||||||| Sbjct: 1542028 actccgtaactgtacacatcaactttctctgtgattggaaggctagaaacccactcagga 1541969 Query: 567 gc 568 || Sbjct: 1541968 gc 1541967 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 503 aacaactccgtaactataaacatcgactttcgccgtgattgggaggcttgaaacccactc 562 ||||||||| |||||||| ||||| || ||| | ||||| || ||||| ||||||||||| Sbjct: 1523875 aacaactccataactatatacatcaaccttctcggtgatcggaaggctagaaacccactc 1523934 Query: 563 aggagc 568 |||||| Sbjct: 1523935 aggagc 1523940 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 632 ctttgtcaacccaaagtcagtgatcttagg 661 ||||| |||||||||||||||||||||||| Sbjct: 1513124 ctttgccaacccaaagtcagtgatcttagg 1513095 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 252 gattccatggttggcctcttgtttctgtcttcctgcaggcaggaaacagccaactt 307 |||||||| |||||||| || || || ||||||| || |||||| ||||||||||| Sbjct: 1513507 gattccattgttggccttttcttcctatcttcctccaagcaggacacagccaactt 1513452 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 642 ccaaagtcagtgatcttaggctc 664 ||||||||||||||||||||||| Sbjct: 1541893 ccaaagtcagtgatcttaggctc 1541871 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 257 catggttggcctcttgtttctgtcttcctgcaggcaggaaa 297 |||| |||||||||||||||| ||||| | |||||| |||| Sbjct: 1523629 catgcttggcctcttgtttctatcttcttccaggcatgaaa 1523669
>dbj|AK121819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099B16, full insert sequence Length = 2712 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 507 actccgtaactataaacatcgactttcgccgtgattgggaggcttgaaacccactcagga 566 ||||||||||| || ||||| |||||| | |||||||| ||||| ||||||||||||||| Sbjct: 2205 actccgtaactgtacacatcaactttctctgtgattggaaggctagaaacccactcagga 2146 Query: 567 gc 568 || Sbjct: 2145 gc 2144 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 642 ccaaagtcagtgatcttaggctc 664 ||||||||||||||||||||||| Sbjct: 2070 ccaaagtcagtgatcttaggctc 2048
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 507 actccgtaactataaacatcgactttcgccgtgattgggaggcttgaaacccactcagga 566 ||||||||||| || ||||| |||||| | |||||||| ||||| ||||||||||||||| Sbjct: 1539749 actccgtaactgtacacatcaactttctctgtgattggaaggctagaaacccactcagga 1539690 Query: 567 gc 568 || Sbjct: 1539689 gc 1539688 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 503 aacaactccgtaactataaacatcgactttcgccgtgattgggaggcttgaaacccactc 562 ||||||||| |||||||| ||||| || ||| | ||||| || ||||| ||||||||||| Sbjct: 1521596 aacaactccataactatatacatcaaccttctcggtgatcggaaggctagaaacccactc 1521655 Query: 563 aggagc 568 |||||| Sbjct: 1521656 aggagc 1521661 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 632 ctttgtcaacccaaagtcagtgatcttagg 661 ||||| |||||||||||||||||||||||| Sbjct: 1510845 ctttgccaacccaaagtcagtgatcttagg 1510816 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 252 gattccatggttggcctcttgtttctgtcttcctgcaggcaggaaacagccaactt 307 |||||||| |||||||| || || || ||||||| || |||||| ||||||||||| Sbjct: 1511228 gattccattgttggccttttcttcctatcttcctccaagcaggacacagccaactt 1511173 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 642 ccaaagtcagtgatcttaggctc 664 ||||||||||||||||||||||| Sbjct: 1539614 ccaaagtcagtgatcttaggctc 1539592 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 257 catggttggcctcttgtttctgtcttcctgcaggcaggaaa 297 |||| |||||||||||||||| ||||| | |||||| |||| Sbjct: 1521350 catgcttggcctcttgtttctatcttcttccaggcatgaaa 1521390
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 294 gaaacagccaacttgatcattgttcttgcttg 325 |||||||||||||||||||||||||||||||| Sbjct: 23429039 gaaacagccaacttgatcattgttcttgcttg 23429070 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 540 attgggaggcttgaaacccactcaggagctatgtaacct 578 |||||||| || |||||||||||||||||||| |||||| Sbjct: 23429300 attgggagactagaaacccactcaggagctatataacct 23429338 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 275 tctgtcttcctgcaggcaggaaacagccaacttgatcattgttcttgcttg 325 ||||||||||| ||||| |||||||| | ||| ||||||| ||||||||| Sbjct: 21986014 tctgtcttcctctaggcatgaaacagcaagcttcatcattgctcttgcttg 21985964 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 543 gggaggcttgaaacccactcaggagcta 570 ||||| ||||||||||||||||| |||| Sbjct: 21985740 gggagacttgaaacccactcaggtgcta 21985713
>dbj|AP003615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0486H12 Length = 179085 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 294 gaaacagccaacttgatcattgttcttgcttg 325 |||||||||||||||||||||||||||||||| Sbjct: 88594 gaaacagccaacttgatcattgttcttgcttg 88625 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 540 attgggaggcttgaaacccactcaggagctatgtaacct 578 |||||||| || |||||||||||||||||||| |||||| Sbjct: 88855 attgggagactagaaacccactcaggagctatataacct 88893
>dbj|AK111737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047K02, full insert sequence Length = 2726 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 294 gaaacagccaacttgatcattgttcttgcttg 325 |||||||||||||||||||||||||||||||| Sbjct: 2417 gaaacagccaacttgatcattgttcttgcttg 2386 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 540 attgggaggcttgaaacccactcaggagctatgtaacct 578 |||||||| || |||||||||||||||||||| |||||| Sbjct: 2156 attgggagactagaaacccactcaggagctatataacct 2118
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 507 actccgtaactataaacatcgactttcgccgtgattgggaggcttgaaacccactcagga 566 ||||| ||||| || ||||| |||||| | |||||||| ||||| ||||||||||||||| Sbjct: 1472993 actccataactgtacacatcaactttctctgtgattggaaggctagaaacccactcagga 1473052 Query: 567 gc 568 || Sbjct: 1473053 gc 1473054 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 492 agctcaagcaaaacaactccgtaactataaacatcgactttcgccgtgattgggaggctt 551 |||||||| | ||||||||| |||||||| ||||| || ||| | ||||| || ||||| Sbjct: 1461597 agctcaagaagaacaactccataactatacacatcaaccttctcggtgatgggaaggcta 1461656 Query: 552 gaaacccactcaggagc 568 ||||||||||| ||||| Sbjct: 1461657 gaaacccactcgggagc 1461673 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 642 ccaaagtcagtgatcttaggctc 664 ||||||||||||||||||||||| Sbjct: 1473128 ccaaagtcagtgatcttaggctc 1473150 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 632 ctttgtcaacccaaagtcagtgatcttagg 661 ||||| |||||||||||||| ||||||||| Sbjct: 1458320 ctttgccaacccaaagtcagcgatcttagg 1458291 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 252 gattccatggttggcctcttgtttctgtcttcctgcaggcaggaaacagccaactt 307 |||||||| |||||||| || || || ||||| | || |||||| ||||||||||| Sbjct: 1458703 gattccattgttggccttttcttcctatcttcttccaagcaggacacagccaactt 1458648
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 507 actccgtaactataaacatcgactttcgccgtgattgggaggcttgaaacccactcagga 566 ||||| ||||| || ||||| |||||| | |||||||| ||||| ||||||||||||||| Sbjct: 1472993 actccataactgtacacatcaactttctctgtgattggaaggctagaaacccactcagga 1473052 Query: 567 gc 568 || Sbjct: 1473053 gc 1473054 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 492 agctcaagcaaaacaactccgtaactataaacatcgactttcgccgtgattgggaggctt 551 |||||||| | ||||||||| |||||||| ||||| || ||| | ||||| || ||||| Sbjct: 1461597 agctcaagaagaacaactccataactatacacatcaaccttctcggtgatgggaaggcta 1461656 Query: 552 gaaacccactcaggagc 568 ||||||||||| ||||| Sbjct: 1461657 gaaacccactcgggagc 1461673 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 642 ccaaagtcagtgatcttaggctc 664 ||||||||||||||||||||||| Sbjct: 1473128 ccaaagtcagtgatcttaggctc 1473150 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 632 ctttgtcaacccaaagtcagtgatcttagg 661 ||||| |||||||||||||| ||||||||| Sbjct: 1458320 ctttgccaacccaaagtcagcgatcttagg 1458291 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 252 gattccatggttggcctcttgtttctgtcttcctgcaggcaggaaacagccaactt 307 |||||||| |||||||| || || || ||||| | || |||||| ||||||||||| Sbjct: 1458703 gattccattgttggccttttcttcctatcttcttccaagcaggacacagccaactt 1458648
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 507 actccgtaactataaacatcgactttcgccgtgattgggaggcttgaaacccactcagga 566 ||||| ||||| || ||||| |||||| | |||||||| ||||| ||||||||||||||| Sbjct: 152739 actccataactgtacacatcaactttctctgtgattggaaggctagaaacccactcagga 152680 Query: 567 gc 568 || Sbjct: 152679 gc 152678 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 492 agctcaagcaaaacaactccgtaactataaacatcgactttcgccgtgattgggaggctt 551 |||||||| | ||||||||| |||||||| ||||| || ||| | ||||| || ||||| Sbjct: 164135 agctcaagaagaacaactccataactatacacatcaaccttctcggtgatgggaaggcta 164076 Query: 552 gaaacccactcaggagc 568 ||||||||||| ||||| Sbjct: 164075 gaaacccactcgggagc 164059 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 642 ccaaagtcagtgatcttaggctc 664 ||||||||||||||||||||||| Sbjct: 152604 ccaaagtcagtgatcttaggctc 152582 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Plus Query: 632 ctttgtcaacccaaagtcagtgatcttagg 661 ||||| |||||||||||||| ||||||||| Sbjct: 167412 ctttgccaacccaaagtcagcgatcttagg 167441 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 252 gattccatggttggcctcttgtttctgtcttcctgcaggcaggaaacagccaactt 307 |||||||| |||||||| || || || ||||| | || |||||| ||||||||||| Sbjct: 167029 gattccattgttggccttttcttcctatcttcttccaagcaggacacagccaactt 167084
>dbj|AB236810.1| Trifolium pratense RNA for putative protein kinase APK1A, complete cds, clone: C2071 Length = 1863 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 504 acaactccgtaactataaacatcg 527 |||||||||||||||||||||||| Sbjct: 893 acaactccgtaactataaacatcg 870
>ref|NM_101638.2| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine kinase AT1G17750 mRNA, complete cds Length = 3379 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 492 agctcaagcaaaacaactccgtaactataaacatc 526 ||||| |||||||||||||| ||||| |||||||| Sbjct: 2966 agctcgagcaaaacaactccataactgtaaacatc 2932
>gb|AY693389.1| Carica papaya putative serine/threonine receptor protein kinase STK5-like gene, partial sequence Length = 547 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 561 tcaggagctatgtaacctatcgttcct 587 |||||||||||||| |||||||||||| Sbjct: 486 tcaggagctatgtatcctatcgttcct 460
>gb|AC034257.3|AC034257 Arabidopsis thaliana chromosome I BAC F11A6 genomic sequence, complete sequence Length = 98950 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 492 agctcaagcaaaacaactccgtaactataaacatc 526 ||||| |||||||||||||| ||||| |||||||| Sbjct: 89468 agctcgagcaaaacaactccataactgtaaacatc 89434
>dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0612G07 Length = 182548 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 275 tctgtcttcctgcaggcaggaaacagccaacttgatcattgttcttgcttg 325 ||||||||||| ||||| |||||||| | ||| ||||||| ||||||||| Sbjct: 23887 tctgtcttcctctaggcatgaaacagcaagcttcatcattgctcttgcttg 23837 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 543 gggaggcttgaaacccactcaggagcta 570 ||||| ||||||||||||||||| |||| Sbjct: 23613 gggagacttgaaacccactcaggtgcta 23586
>gb|AC132317.2| Mus musculus BAC clone RP24-241J19 from chromosome 15, complete sequence Length = 171980 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 263 tggcctcttgtttctgtcttcc 284 |||||||||||||||||||||| Sbjct: 33341 tggcctcttgtttctgtcttcc 33320
>gb|AC152181.1| Mus musculus BAC clone RP24-321P19 from 15, complete sequence Length = 187733 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 263 tggcctcttgtttctgtcttcc 284 |||||||||||||||||||||| Sbjct: 99121 tggcctcttgtttctgtcttcc 99142
>ref|NM_104221.2| Arabidopsis thaliana kinase AT1G53430 mRNA, complete cds Length = 3353 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 559 actcaggagctatgtaacctatcgttcct 587 |||||||||| ||||||||||| |||||| Sbjct: 2631 actcaggagccatgtaacctattgttcct 2603
>ref|XM_468388.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3102 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 486 gataaaagctcaagcaaaacaactccgtaactataaacatc 526 ||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 2108 gataaaagctccagcaagacaacaccgtaactgtagacatc 2068
>ref|XM_468389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2633 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 486 gataaaagctcaagcaaaacaactccgtaactataaacatc 526 ||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 1639 gataaaagctccagcaagacaacaccgtaactgtagacatc 1599
>ref|XM_451329.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A07403g predicted mRNA Length = 2640 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 aacccaaagtcagtgatctta 659 ||||||||||||||||||||| Sbjct: 2252 aacccaaagtcagtgatctta 2232
>ref|XM_662060.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.80070) partial mRNA Length = 5169 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 tgatcattgttcttgcttgga 327 ||||||||||||||||||||| Sbjct: 3588 tgatcattgttcttgcttgga 3608
>emb|CR954186.2| Medicago truncatula chromosome 5 clone mth2-117e18, COMPLETE SEQUENCE Length = 113233 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 498 agcaaaacaactccgtaactataaacatc 526 ||||||||||||||||| ||||| ||||| Sbjct: 106689 agcaaaacaactccgtagctatatacatc 106717
>emb|AL445426.20| Human DNA sequence from clone RP11-62J10 on chromosome 1 Contains the 3' end of a novel gene and a CpG island, complete sequence Length = 159117 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 tgatcattgttcttgcttgga 327 ||||||||||||||||||||| Sbjct: 35263 tgatcattgttcttgcttgga 35243
>emb|BX927315.10| Zebrafish DNA sequence from clone CH211-215B16 in linkage group 2, complete sequence Length = 172122 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 102 ttcaaatgcatcacagtgacaactg 126 ||||||||||| ||||||||||||| Sbjct: 171226 ttcaaatgcattacagtgacaactg 171250
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 639 aacccaaagtcagtgatctta 659 ||||||||||||||||||||| Sbjct: 663512 aacccaaagtcagtgatctta 663492
>emb|BX901918.12| Zebrafish DNA sequence from clone DKEY-189N19 in linkage group 2, complete sequence Length = 171438 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 102 ttcaaatgcatcacagtgacaactg 126 ||||||||||| ||||||||||||| Sbjct: 1104 ttcaaatgcattacagtgacaactg 1128
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 ttcttcaagtcctcccagttt 400 ||||||||||||||||||||| Sbjct: 2298382 ttcttcaagtcctcccagttt 2298402
>ref|XM_625516.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_550), partial mRNA Length = 7059 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 tgatcattgttcttgcttgga 327 ||||||||||||||||||||| Sbjct: 5487 tgatcattgttcttgcttgga 5507
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 486 gataaaagctcaagcaaaacaactccgtaactataaacatc 526 ||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 34964569 gataaaagctccagcaagacaacaccgtaactgtagacatc 34964609 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 actaactactagcttcgtcaa 228 ||||||||||||||||||||| Sbjct: 22343872 actaactactagcttcgtcaa 22343852
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 actaactactagcttcgtcaa 228 ||||||||||||||||||||| Sbjct: 102516 actaactactagcttcgtcaa 102496
>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_A05 Length = 113326 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 actaactactagcttcgtcaa 228 ||||||||||||||||||||| Sbjct: 91 actaactactagcttcgtcaa 71
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 486 gataaaagctcaagcaaaacaactccgtaactataaacatc 526 ||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 24910 gataaaagctccagcaagacaacaccgtaactgtagacatc 24950
>dbj|AK102246.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088F01, full insert sequence Length = 3102 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 486 gataaaagctcaagcaaaacaactccgtaactataaacatc 526 ||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 2107 gataaaagctccagcaagacaacaccgtaactgtagacatc 2067
>dbj|AK069234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010G02, full insert sequence Length = 2634 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 486 gataaaagctcaagcaaaacaactccgtaactataaacatc 526 ||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 1639 gataaaagctccagcaagacaacaccgtaactgtagacatc 1599
>gb|AC167240.5| Mus musculus BAC clone RP24-548A13 from chromosome 7, complete sequence Length = 218177 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 catgaaaaacatggaaattt 60 |||||||||||||||||||| Sbjct: 205362 catgaaaaacatggaaattt 205343
>ref|NM_125200.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT5G58150 mRNA, complete cds Length = 2760 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 agctcaagcaaaacaactcc 511 |||||||||||||||||||| Sbjct: 2396 agctcaagcaaaacaactcc 2377
>ref|NM_180881.1| Arabidopsis thaliana PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE); kinase AT5G58140 (PHOT2) transcript variant AT5G58140.3 mRNA, complete cds Length = 6033 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 agctcaagcaaaacaactcc 511 |||||||||||||||||||| Sbjct: 3367 agctcaagcaaaacaactcc 3386
>ref|NM_180879.1| Arabidopsis thaliana PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE); kinase AT5G58140 (PHOT2) transcript variant AT5G58140.1 mRNA, complete cds Length = 5977 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 agctcaagcaaaacaactcc 511 |||||||||||||||||||| Sbjct: 3311 agctcaagcaaaacaactcc 3330
>ref|NM_180880.1| Arabidopsis thaliana PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE); kinase AT5G58140 (PHOT2) transcript variant AT5G58140.2 mRNA, complete cds Length = 6033 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 agctcaagcaaaacaactcc 511 |||||||||||||||||||| Sbjct: 3367 agctcaagcaaaacaactcc 3386
>gb|AY432248.1| Aedes aegypti ASAP ID: 43198 unknown mRNA sequence Length = 620 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 aaaaacatggaaatttcacc 64 |||||||||||||||||||| Sbjct: 212 aaaaacatggaaatttcacc 231
>gb|AC144486.2| Gasterosteus aculeatus clone CH213-169J23, complete sequence Length = 157502 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 gccgtgattgggaggcttga 553 |||||||||||||||||||| Sbjct: 100904 gccgtgattgggaggcttga 100923
>gb|AC107733.14| Mus musculus chromosome 5, clone RP23-410E2, complete sequence Length = 200403 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tggcctcttgtttctgtctt 282 |||||||||||||||||||| Sbjct: 182010 tggcctcttgtttctgtctt 181991
>gb|AC148453.2| Xenopus tropicalis clone CH216-147I21, complete sequence Length = 158285 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 acagccaacttgatcattgt 316 |||||||||||||||||||| Sbjct: 24251 acagccaacttgatcattgt 24232
>gb|AC121955.2| Mus musculus BAC clone RP24-223N5 from 5, complete sequence Length = 153819 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 tggcctcttgtttctgtctt 282 |||||||||||||||||||| Sbjct: 38587 tggcctcttgtttctgtctt 38568
>gb|AF205182.1| Neotemnopteryx sp. C NspC2 cytochrome oxidase subunit II (COII) gene, complete cds; mitochondrial gene for mitochondrial product Length = 687 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 caacaaattcattaatcgat 377 |||||||||||||||||||| Sbjct: 141 caacaaattcattaatcgat 160
>gb|AF205181.1| Neotemnopteryx sp. C NspC1 cytochrome oxidase subunit II (COII) gene, complete cds; mitochondrial gene for mitochondrial product Length = 687 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 caacaaattcattaatcgat 377 |||||||||||||||||||| Sbjct: 141 caacaaattcattaatcgat 160
>gb|AF205176.1| Neotemnopteryx styliparedra Nstyl2 cytochrome oxidase subunit II (COII) gene, complete cds; mitochondrial gene for mitochondrial product Length = 687 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 caacaaattcattaatcgat 377 |||||||||||||||||||| Sbjct: 141 caacaaattcattaatcgat 160
>gb|AF205175.1| Neotemnopteryx styliparedra Nstyl1 cytochrome oxidase subunit II (COII) gene, complete cds; mitochondrial gene for mitochondrial product Length = 687 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 caacaaattcattaatcgat 377 |||||||||||||||||||| Sbjct: 141 caacaaattcattaatcgat 160
>gb|AF205174.1| Neotemnopteryx fulva Nfulva2 cytochrome oxidase subunit II (COII) gene, complete cds; mitochondrial gene for mitochondrial product Length = 687 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 caacaaattcattaatcgat 377 |||||||||||||||||||| Sbjct: 141 caacaaattcattaatcgat 160
>gb|AF205173.1| Neotemnopteryx fulva Nfulva1 cytochrome oxidase subunit II (COII) gene, complete cds; mitochondrial gene for mitochondrial product Length = 687 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 caacaaattcattaatcgat 377 |||||||||||||||||||| Sbjct: 141 caacaaattcattaatcgat 160
>gb|AC150787.15| Medicago truncatula clone mth2-171n13, complete sequence Length = 82665 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 609 gtggctccgcctctgtttag 628 |||||||||||||||||||| Sbjct: 62948 gtggctccgcctctgtttag 62967
>gb|AC148176.11| Medicago truncatula clone mth2-3j15, complete sequence Length = 119267 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 gtggctccgcctctgtttag 628 |||||||||||||||||||| Sbjct: 114577 gtggctccgcctctgtttag 114558
>emb|AL391817.18| Human DNA sequence from clone RP11-91B9 on chromosome 1 Contains the PRELP gene for proline arginine-rich end leucine-rich repeat protein and the OPTC gene for opticin, complete sequence Length = 162436 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 gacatgttctgtgtggctcc 616 |||||||||||||||||||| Sbjct: 56899 gacatgttctgtgtggctcc 56880
>emb|AL158171.10| Human DNA sequence from clone RP5-1027F20 on chromosome 1q32.3-42.13, complete sequence Length = 51000 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 ttattcatacattccacaaacaat 195 |||||||| ||||||||||||||| Sbjct: 41264 ttattcattcattccacaaacaat 41287
>emb|AL136991.26| Human DNA sequence from clone RP11-189J1 on chromosome 20 Contains the 3' end of the gene for a novel protein (LOC284776), complete sequence Length = 169342 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ttattcatacattccacaaa 191 |||||||||||||||||||| Sbjct: 7353 ttattcatacattccacaaa 7372
>emb|AL137797.9| Human DNA sequence from clone RP5-1109J22 on chromosome 1 Contains three novel genes, the OTX3 gene for orthodenticle homolog 3 (Drosophila) and a CpG island, complete sequence Length = 105345 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 gacatgttctgtgtggctcc 616 |||||||||||||||||||| Sbjct: 5131 gacatgttctgtgtggctcc 5150
>gb|AY123035.1| Arabidopsis thaliana putative receptor protein kinase (At5g58150) mRNA, complete cds Length = 2389 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 agctcaagcaaaacaactcc 511 |||||||||||||||||||| Sbjct: 2129 agctcaagcaaaacaactcc 2110
>gb|AY091097.1| Arabidopsis thaliana putative receptor protein kinase (At5g58150) mRNA, complete cds Length = 2774 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 agctcaagcaaaacaactcc 511 |||||||||||||||||||| Sbjct: 2396 agctcaagcaaaacaactcc 2377
>gb|AC116560.5| Ustilago hordei clone uhobac-4k21, complete sequence Length = 100958 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 gtcaacaaattcattaatcgatga 379 |||||||||||||||||| ||||| Sbjct: 28146 gtcaacaaattcattaatggatga 28169
>gb|AC114899.5| Ustilago hordei strain 4875-4 clone uhobac-1n1, complete sequence Length = 100185 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 gtcaacaaattcattaatcgatga 379 |||||||||||||||||| ||||| Sbjct: 29615 gtcaacaaattcattaatggatga 29592
>gb|AC025177.6| Homo sapiens chromosome 5 clone CTD-2131I18, complete sequence Length = 112967 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 cactgtgacctagatggctggacc 87 ||||||||||||| |||||||||| Sbjct: 88862 cactgtgacctaggtggctggacc 88885
>gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, complete sequence Length = 227950 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 ccttattcatacattccacaaaca 193 |||||||||| ||||||||||||| Sbjct: 197361 ccttattcattcattccacaaaca 197384
>gb|AC011974.11| Homo sapiens, clone RP11-15L5, complete sequence Length = 153168 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 gattcttcaagtcctcccag 397 |||||||||||||||||||| Sbjct: 117526 gattcttcaagtcctcccag 117507
>gb|AC159005.3| Mus musculus BAC clone RP23-67F4 from chromosome 7, complete sequence Length = 230018 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 catgaaaaacatggaaattt 60 |||||||||||||||||||| Sbjct: 37031 catgaaaaacatggaaattt 37012
>dbj|AK044299.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930006D11 product:hypothetical protein, full insert sequence Length = 2764 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gcttctgcagcttgctatgc 440 |||||||||||||||||||| Sbjct: 1212 gcttctgcagcttgctatgc 1193
>gb|AY083682.1| Avena sativa clone OP45 receptor kinase gene cluster, complete sequence Length = 16091 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 560 ctcaggagctatgtaacctatcgttcctcgca 591 ||||||||||||||| || || |||||||||| Sbjct: 5095 ctcaggagctatgtagccaatggttcctcgca 5126
>gb|AC116374.10| Mus musculus chromosome 1, clone RP23-294I9, complete sequence Length = 179835 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 ccttattcatacattccacaaaca 193 |||||||||| ||||||||||||| Sbjct: 51063 ccttattcattcattccacaaaca 51086
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7 Length = 87090 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 agctcaagcaaaacaactcc 511 |||||||||||||||||||| Sbjct: 3573 agctcaagcaaaacaactcc 3592
>dbj|AK117232.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL16-78-F14 Length = 2835 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 agctcaagcaaaacaactcc 511 |||||||||||||||||||| Sbjct: 168 agctcaagcaaaacaactcc 187
>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364 Length = 526707 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 gtcaacaaattcattaatcgatga 379 |||||||||||||||||| ||||| Sbjct: 303620 gtcaacaaattcattaatggatga 303597
>dbj|AP000484.5| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-14B22, complete sequences Length = 105149 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 gaacctacagccaactctga 472 |||||||||||||||||||| Sbjct: 64089 gaacctacagccaactctga 64108
>dbj|AP005714.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB857C2, complete sequence Length = 104612 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 gattcttcaagtcctcccag 397 |||||||||||||||||||| Sbjct: 13203 gattcttcaagtcctcccag 13184
>ref|NM_177790.2| Mus musculus RIKEN cDNA A930006D11Rik gene (A930006D11Rik), mRNA Length = 2764 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gcttctgcagcttgctatgc 440 |||||||||||||||||||| Sbjct: 1212 gcttctgcagcttgctatgc 1193
>dbj|AB063082.1| Macaca fascicularis brain cDNA clone:QtrA-14494, full insert sequence Length = 2925 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 gacatgttctgtgtggctcc 616 |||||||||||||||||||| Sbjct: 656 gacatgttctgtgtggctcc 675 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,670,699 Number of Sequences: 3902068 Number of extensions: 5670699 Number of successful extensions: 112055 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 111545 Number of HSP's gapped (non-prelim): 502 length of query: 669 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 646 effective length of database: 17,143,297,704 effective search space: 11074570316784 effective search space used: 11074570316784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)