ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63e22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ... 206 2e-53
2RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ... 181 5e-46
3RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a... 179 2e-45
4RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a... 178 4e-45
5RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a... 177 9e-45
6RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ... 169 2e-42
7RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ... 169 3e-42
8RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a... 167 1e-41
9RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a... 164 8e-41
10RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a... 162 2e-40
11RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a... 162 3e-40
12RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ... 161 5e-40
13RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 157 8e-39
14RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ... 156 2e-38
15RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a... 129 4e-30
16RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a... 101 7e-22
17RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a... 91 9e-19
18RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a... 83 2e-16
19RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase a... 44 1e-04
20ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (I... 33 0.37
21ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0 33 0.37
22DNAA_STRAW (Q82FD8) Chromosomal replication initiator protein dnaA 30 1.9
23ABL_DROME (P00522) Tyrosine-protein kinase Abl (EC 2.7.10.2) (Ab... 30 1.9
24ODO1_STAS1 (Q49XM5) 2-oxoglutarate dehydrogenase E1 component (E... 28 7.1
25NIFD_CLOPA (P00467) Nitrogenase molybdenum-iron protein alpha ch... 28 7.1
26H1X_HUMAN (Q92522) Histone H1x 28 7.1
2741_CANFA (Q6Q7P4) Protein 4.1 (Band 4.1) (P4.1) (4.1R) 28 7.1
28SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich... 28 9.2

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  206 bits (523), Expect = 2e-53
 Identities = 101/102 (99%), Positives = 101/102 (99%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY
Sbjct: 324 FPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 383

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 124
           GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK
Sbjct: 384 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425



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>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  181 bits (460), Expect = 5e-46
 Identities = 85/102 (83%), Positives = 94/102 (92%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EY
Sbjct: 327 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 386

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 124
           GHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYGK
Sbjct: 387 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGK 428



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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  179 bits (454), Expect = 2e-45
 Identities = 86/101 (85%), Positives = 94/101 (93%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VRKWV + GVENI KRLVNSREGPP F+QPKMTIEKL+EY
Sbjct: 327 FPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEY 386

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 127
           G+MLV+EQENVKRVQLA++YLSEAALG AN DAMKTG+FYG
Sbjct: 387 GYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427



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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  178 bits (452), Expect = 4e-45
 Identities = 83/100 (83%), Positives = 96/100 (96%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VR+WV E GVENI+++LVNS+EGPPTF+QPK+TIEKL+EY
Sbjct: 333 FPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEY 392

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFY 130
           GHMLV EQENVKRVQLADKYL+EAALG+AN+DAMKTG+F+
Sbjct: 393 GHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432



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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  177 bits (449), Expect = 9e-45
 Identities = 84/101 (83%), Positives = 93/101 (92%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VRKW+  +GV++I K+LVNS+EGPPTF+QPKMTIEKL+EY
Sbjct: 337 FPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEY 396

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 127
           G+MLVQEQENVKRVQLADKYLSEAALG AN DAM TG FYG
Sbjct: 397 GNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437



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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  169 bits (429), Expect = 2e-42
 Identities = 79/99 (79%), Positives = 91/99 (91%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VRKWV E+GV+ I K+LVNS+EGPPTF+QPKMTI+KL++Y
Sbjct: 337 FPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQY 396

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAF 133
           G+MLV+EQENVKRVQLADKY+SEAALG AN DA+K G F
Sbjct: 397 GNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435



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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  169 bits (428), Expect = 3e-42
 Identities = 80/101 (79%), Positives = 91/101 (90%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVY D VRKWV E+GV+ I K+LVNS+EGPP+F+QPKMTI+KL+ Y
Sbjct: 337 FPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGY 396

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 127
           G MLVQEQENVKRVQLADKY+SEAALG AN+DA+K G FYG
Sbjct: 397 GGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437



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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  167 bits (422), Expect = 1e-41
 Identities = 76/100 (76%), Positives = 93/100 (93%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VRKW+  +GV+   K+LVNS+EGPPTFDQPKM+++KL++Y
Sbjct: 339 FPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQY 398

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFY 130
           G+MLVQEQENVKRVQLADKYL+EAALG AN+DA+K+G+F+
Sbjct: 399 GNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438



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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  164 bits (415), Expect = 8e-41
 Identities = 75/102 (73%), Positives = 90/102 (88%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVY D VRKWV  +GV+N+ K+LVNS++GPP F+QP+MT++KLMEY
Sbjct: 335 FPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEY 394

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 124
           G+MLVQEQENVKRVQLAD+Y+S AALG AN DA+  G F+GK
Sbjct: 395 GNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGK 436



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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  162 bits (411), Expect = 2e-40
 Identities = 80/102 (78%), Positives = 88/102 (86%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VRK+V  +GVE I KRLVNSREGPP F+QP+MT EKLMEY
Sbjct: 337 FPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEY 396

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 124
           G+MLV EQENVKRVQLA+ YLS+AALG AN DA+  G FYGK
Sbjct: 397 GNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGK 438



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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  162 bits (410), Expect = 3e-40
 Identities = 74/99 (74%), Positives = 91/99 (91%)
 Frame = -1

Query: 426 PGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYG 247
           PGQSIDFFGALRARVYDD VRKW+  +GV+++ K+LVNS+EGPPTFDQPKMT++KL+ Y 
Sbjct: 342 PGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYA 401

Query: 246 HMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFY 130
            MLVQEQENVKRVQLAD+YL+EAALG AN+DA+K+G+F+
Sbjct: 402 SMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440



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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  161 bits (408), Expect = 5e-40
 Identities = 77/100 (77%), Positives = 87/100 (87%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VRKWV   G+E I  +L+NS +GPPTF+QPKMTIEKL+EY
Sbjct: 341 FPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEY 400

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFY 130
           G+MLVQEQENVKRVQLADKYL EAALG AN DA+  G+F+
Sbjct: 401 GNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440



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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  157 bits (398), Expect = 8e-39
 Identities = 75/97 (77%), Positives = 86/97 (88%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VRKWV   G+E I ++L+NSR+GPPTF+QPKMT+EKL+EY
Sbjct: 336 FPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEY 395

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTG 139
           G+MLVQEQENVKRVQLA+ YL EAALG AN DA+ TG
Sbjct: 396 GNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432



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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  156 bits (394), Expect = 2e-38
 Identities = 75/99 (75%), Positives = 85/99 (85%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VRKWV   G+E I  +L+NS +GPPTF+QPKMT+EKL+EY
Sbjct: 341 FPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEY 400

Query: 249 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAF 133
           G+MLVQEQENVKRVQLA+ YL EAALG AN DA+ TG F
Sbjct: 401 GNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439



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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  129 bits (323), Expect = 4e-30
 Identities = 61/76 (80%), Positives = 67/76 (88%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VRKW   +GVE I + LVNS+E PPTFDQPKMTIEKL+EY
Sbjct: 334 FPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEY 393

Query: 249 GHMLVQEQENVKRVQL 202
           G+MLV EQENVKRV+L
Sbjct: 394 GNMLVMEQENVKRVKL 409



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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  101 bits (252), Expect = 7e-22
 Identities = 52/86 (60%), Positives = 64/86 (74%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FPGQSIDFFGALRARVYDD VR+W+ + GV+ I ++LVN+R+      +  M +  L++Y
Sbjct: 310 FPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKY 368

Query: 249 GHMLVQEQENVKRVQLADKYLSEAAL 172
           G  LV EQENVKRVQLAD YLS A L
Sbjct: 369 GKSLVDEQENVKRVQLADAYLSGAEL 394



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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 91.3 bits (225), Expect = 9e-19
 Identities = 39/80 (48%), Positives = 58/80 (72%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FP QSIDFF ALR+R+YD+ +R ++ ++G EN+S R+VNS EGPP F +P  T+  L+E 
Sbjct: 210 FPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIES 269

Query: 249 GHMLVQEQENVKRVQLADKY 190
            + +V EQ+ ++  QL D+Y
Sbjct: 270 ANFMVAEQKRIETSQLVDEY 289



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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 38/80 (47%), Positives = 56/80 (70%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 250
           FP QSIDFF ALR+R+YD  +R ++ ++G E IS R+VNS E PP F +P  ++  L+E 
Sbjct: 210 FPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIES 269

Query: 249 GHMLVQEQENVKRVQLADKY 190
           G++++ EQ+ V   QL D+Y
Sbjct: 270 GNLVLGEQQRVDNSQLVDEY 289



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>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 26/56 (46%), Positives = 27/56 (48%)
 Frame = -1

Query: 429 FPGQSIDFFGALRARVYDDXVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEK 262
           FPGQSIDFFGALR                            EGPPTF+QP MTIEK
Sbjct: 5   FPGQSIDFFGALR----------------------------EGPPTFEQPAMTIEK 32



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>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell|
           protein 0)
          Length = 532

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 328 QAPRQLEGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 185
           QAPRQ +   A  RP         G RP A PG   R++   RR+ P+
Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296



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>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0|
          Length = 532

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 328 QAPRQLEGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 185
           QAPRQ +   A  RP         G RP A PG   R++   RR+ P+
Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296



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>DNAA_STRAW (Q82FD8) Chromosomal replication initiator protein dnaA|
          Length = 653

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = -3

Query: 319 RQLEGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHED 143
           R  EG   + R   DDHR+ H  R   GPG          +  P RG   P+ R  + D
Sbjct: 125 RGREGYEGYGRHRADDHRQGHNDRHQGGPG---------DQLPPSRGDQLPTARPAYPD 174



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>ABL_DROME (P00522) Tyrosine-protein kinase Abl (EC 2.7.10.2) (Abelson|
           protein) (D-ash)
          Length = 1620

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -2

Query: 428 SRGSPSTSSARCGHGCTTTRCASGSARSA 342
           S  +PSTS    G G TTT  ASG A S+
Sbjct: 647 SSSAPSTSGVATGGGATTTTAASGCASSS 675



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>ODO1_STAS1 (Q49XM5) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 933

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
 Frame = -1

Query: 354 GEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQ-------EQENVKRVQLAD 196
           GE  +   ++   N  +G  T  +    I+ + +YGH+L         ++ENV ++ + D
Sbjct: 49  GEANIATNTEGQSNVTKGDSTIKRVMRLIDNIRQYGHLLADIYPVNRPQRENVPKLNMED 108

Query: 195 KYLSEAAL 172
             L +  L
Sbjct: 109 FNLDQETL 116



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>NIFD_CLOPA (P00467) Nitrogenase molybdenum-iron protein alpha chain (EC|
           1.18.6.1) (Nitrogenase component I) (Dinitrogenase)
          Length = 533

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/52 (28%), Positives = 30/52 (57%)
 Frame = +2

Query: 263 FSMVILGWSNVGGPSLELTRRLEMFSTPISPTHLRTXSSYTRARSAPKKSMD 418
           +S+ +LG  N+GG + E+ R LE     ++ T L   ++Y + ++A K  ++
Sbjct: 207 YSINVLGEYNIGGDAWEMDRVLEKIGYHVNAT-LTGDATYEKVQNADKADLN 257



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>H1X_HUMAN (Q92522) Histone H1x|
          Length = 213

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 34  ESKSLSGFRVQNSPTYI*CMHAS*VE*DLLLAVEGTGLHG 153
           E+K +  F  QN  TY+     + V+ D LL V+GTG +G
Sbjct: 73  EAKKVPWFDQQNGRTYLKYSIKALVQNDTLLQVKGTGANG 112



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>41_CANFA (Q6Q7P4) Protein 4.1 (Band 4.1) (P4.1) (4.1R)|
          Length = 810

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 21/107 (19%)
 Frame = -3

Query: 301 AAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQRGGAR---PSQR--RRHED-- 143
           +A  +PAQ++HRE        G G  E      + + P+    R    SQ+  RRH +  
Sbjct: 153 SAETQPAQEEHREDPDFETKEGGGLEECSKIEVKEESPESKAERELKASQKSIRRHRNMH 212

Query: 142 -----------RCLL-RQVEGPTLLKMHACTIYML--DYFGPEIHSN 44
                       C++ +  +G  LLK     + +L  DYFG  I  N
Sbjct: 213 CKVSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDN 259



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>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -3

Query: 256 GVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHEDRCLLRQVEGP 113
           G +P  GPG G   A     + P RGG  P   R+H      +  +GP
Sbjct: 207 GPKPGGGPGMG---APGGHPKPPHRGGGEPRGGRQHHAPYHQQHHQGP 251


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,993,905
Number of Sequences: 219361
Number of extensions: 979281
Number of successful extensions: 3357
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3348
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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