Clone Name
rbah63h01
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 gb|AF346003.1|AF346003 Lolium perenne malate dehydrogenase mRNA,...
460
e-126
2 gb|BT016453.1| Zea mays clone Contig286 mRNA sequence
355
1e-94
3 gb|AF007581.1|AF007581 Zea mays cytoplasmic malate dehydrogenase...
355
1e-94
4 gb|AF379609.1|AF379609 Zea mays malate dehydrogenase mRNA, parti...
347
2e-92
5 gb|AY109362.1| Zea mays CL1892_2 mRNA sequence
347
2e-92
6 ref|NM_197014.1| Oryza sativa (japonica cultivar-group) cytoplas...
323
4e-85
7 dbj|AK066396.1| Oryza sativa (japonica cultivar-group) cDNA clon...
323
4e-85
8 dbj|AK104691.1| Oryza sativa (japonica cultivar-group) cDNA clon...
315
9e-83
9 gb|AF353203.1| Oryza sativa cytoplasmic malate dehydrogenase mRN...
315
9e-83
10 gb|AY236152.1| Triticum aestivum cytosolic malate dehydrogenase ...
278
2e-71
11 gb|DQ083217.1| Oryza sativa (indica cultivar-group) clone 8S3C18...
188
1e-44
12 gb|DQ225182.1| Lycopersicon chilense malate dehydrogenase mRNA, ...
167
5e-38
13 ref|NM_123699.2| Arabidopsis thaliana malate dehydrogenase/ oxid...
147
5e-32
14 gb|AY091220.1| Arabidopsis thaliana putative cytosolic malate de...
147
5e-32
15 gb|AY072137.1| Arabidopsis thaliana putative cytosolic malate de...
147
5e-32
16 ref|NM_100321.2| Arabidopsis thaliana malate dehydrogenase/ oxid...
143
7e-31
17 gb|AY133655.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, co...
143
7e-31
18 gb|AY081563.1| Arabidopsis thaliana unknown protein (At1g04410) ...
143
7e-31
19 gb|AY065134.1| Arabidopsis thaliana unknown protein (At1g04410; ...
143
7e-31
20 gb|AY050374.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, co...
143
7e-31
21 emb|BX815185.1|CNS0ACZH Arabidopsis thaliana Full-length cDNA Co...
143
7e-31
22 emb|BX815710.1|CNS0ACSG Arabidopsis thaliana Full-length cDNA Co...
143
7e-31
23 gb|AY088023.1| Arabidopsis thaliana clone 40467 mRNA, complete s...
143
7e-31
24 emb|X96539.1|MCMDH M.crystallinum mRNA for malate dehydrogenase
139
1e-29
25 gb|AY087986.1| Arabidopsis thaliana clone 40174 mRNA, complete s...
139
1e-29
26 emb|AJ251083.1|BVU251083 Beta vulgaris mRNA for putative malate ...
137
4e-29
27 gb|AF367442.1| Prunus persica clone Mdh1 NAD-dependent malate de...
137
4e-29
28 emb|AM040268.1| Capsicum chinense partial mRNA for cytosolic mal...
135
2e-28
29 emb|AJ843126.1| Plantago major mRNA for malate dehydrogenase (md...
131
3e-27
30 gb|DQ294258.1| Solanum tuberosum clone 093D06 malate dehydrogena...
129
1e-26
31 emb|AJ299256.1|NTA299256 Nicotiana tabacum mRNA for malate dehyd...
127
4e-26
32 emb|AJ299059.1|CAR299059 Cicer arietinum mRNA for cytosolic mala...
119
1e-23
33 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
119
1e-23
34 gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055...
119
1e-23
35 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
119
1e-23
36 gb|AY057442.1| Arabidopsis thaliana ecotype Ler cryptochrome 2 (...
101
2e-18
37 gb|AY057441.1| Arabidopsis thaliana ecotype Cvi cryptochrome 2 (...
101
2e-18
38 gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis tha...
101
2e-18
39 emb|BX841818.1|CNS09Y6C Arabidopsis thaliana Full-length cDNA Co...
92
2e-15
40 gb|AF459645.1| Lupinus albus malate dehydrogenase (MDH1) mRNA, c...
88
4e-14
41 gb|AF459646.1| Lupinus albus malate dehydrogenase (MDH2) mRNA, c...
72
2e-09
42 gb|AY485993.1| Pinus pinaster malate dehydrogenase (mdh) mRNA, c...
70
9e-09
43 dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...
70
9e-09
44 gb|DQ167567.1| Zea mays clone MCI21 mRNA sequence
66
1e-07
45 gb|AY496910.1| Glycine max cytosolic malate dehydrogenase mRNA, ...
66
1e-07
46 gb|AY161295.1| Danio rerio cytosolic malate dehydrogenase B (mdh...
66
1e-07
47 ref|NM_199969.1| Danio rerio malate dehydrogenase 1b, NAD (solub...
66
1e-07
48 gb|BC071512.1| Danio rerio malate dehydrogenase 1b, NAD (soluble...
66
1e-07
49 gb|BC050508.1| Danio rerio malate dehydrogenase 1b, NAD (soluble...
66
1e-07
50 gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete se...
62
2e-06
51 emb|CR352220.19| Zebrafish DNA sequence from clone DKEY-148F10 i...
62
2e-06
52 ref|XM_681988.1| PREDICTED: Danio rerio similar to cytosolic mal...
58
3e-05
53 gb|AF020272.1|AF020272 Medicago sativa cytosolic malate dehydrog...
58
3e-05
54 emb|AL929560.14| Zebrafish DNA sequence from clone CH211-241O15 ...
54
5e-04
55 gb|AC121571.4| Mus musculus BAC clone RP23-231J6 from 3, complet...
48
0.032
56 gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
46
0.12
57 gb|DQ004558.1| Oreochromis mossambicus malate dehydrogenase A (M...
46
0.12
58 emb|CR675000.2|CNS0FJSU Tetraodon nigroviridis full-length cDNA
44
0.49
59 gb|AC140228.3| Mus musculus BAC clone RP24-488C4 from 10, comple...
44
0.49
60 gb|L41699.1|PS300585E Eucalyptus globulus bicostata symbiont (F0...
44
0.49
61 gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr...
42
1.9
62 gb|BC059124.1| Rattus norvegicus malate dehydrogenase 1, NAD (so...
42
1.9
63 gb|AC112682.12| Mus musculus chromosome 6, clone RP23-332K10, co...
42
1.9
64 emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ...
42
1.9
65 emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chrom...
42
1.9
66 ref|XM_572644.1| Cryptococcus neoformans var. neoformans JEC21 h...
42
1.9
67 emb|AJ250843.1|MSQ250843 Mantoniella squamata mRNA for cytosolic...
42
1.9
68 ref|NM_033235.1| Rattus norvegicus malate dehydrogenase 1, NAD (...
42
1.9
69 gb|AF093773.1|AF093773 Rattus norvegicus cytosolic malate dehydr...
42
1.9
70 ref|XM_636241.1| Dictyostelium discoideum malate dehydrogenase (...
40
7.7
71 ref|NM_005917.2| Homo sapiens malate dehydrogenase 1, NAD (solub...
40
7.7
72 gb|AE008571.1| Rickettsia conorii str. Malish 7, section 3 of 11...
40
7.7
73 gb|BC001484.2| Homo sapiens malate dehydrogenase 1, NAD (soluble...
40
7.7
74 gb|BC053105.1| Mus musculus phosphorylase kinase beta, mRNA (cDN...
40
7.7
75 ref|NM_199446.1| Mus musculus phosphorylase kinase beta (Phkb), ...
40
7.7
76 gb|BC068420.1| Danio rerio wu:fj56a04, mRNA (cDNA clone IMAGE:69...
40
7.7
77 gb|AC125117.4| Mus musculus BAC clone RP24-261P10 from chromosom...
40
7.7
78 gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, comple...
40
7.7
79 gb|AC117185.2| Mus musculus BAC clone RP23-37M7 from 8, complete...
40
7.7
80 gb|AC122858.2| Mus musculus BAC clone RP23-126F14 from 14, compl...
40
7.7
81 emb|AL445195.4| Human DNA sequence from clone RP11-427O13 on chr...
40
7.7
82 gb|AC079243.7| Mus musculus strain C57BL6/J chromosome 6 clone R...
40
7.7
83 gb|AC055713.29| Homo sapiens 12 BAC RP11-486O12 (Roswell Park Ca...
40
7.7
84 emb|AL023592.1|SPCC550 S.pombe chromosome III cosmid c550
40
7.7
85 emb|BX641152.1|HSM807171 Homo sapiens mRNA; cDNA DKFZp686I13109 ...
40
7.7
86 gb|AC114399.2| Homo sapiens chromosome 3 clone RP11-1019A2, comp...
40
7.7
87 dbj|AK131442.1| Homo sapiens cDNA FLJ16577 fis, clone TESTI20266...
40
7.7
88 emb|CR622929.1| full-length cDNA clone CS0DC020YF01 of Neuroblas...
40
7.7
89 emb|CR619426.1| full-length cDNA clone CS0DI002YM05 of Placenta ...
40
7.7
90 emb|CR609240.1| full-length cDNA clone CS0DC013YO22 of Neuroblas...
40
7.7
91 emb|CR606360.1| full-length cDNA clone CS0DJ015YM22 of T cells (...
40
7.7
92 emb|CR603513.1| full-length cDNA clone CS0DC017YG07 of Neuroblas...
40
7.7
93 emb|CR598586.1| full-length cDNA clone CS0DJ013YB20 of T cells (...
40
7.7
94 emb|CR594032.1| full-length cDNA clone CS0DB003YN14 of Neuroblas...
40
7.7
95 gb|AC157099.5| Mus musculus 6 BAC RP24-467O4 (Roswell Park Cance...
40
7.7
96 gb|AC104663.3| Homo sapiens BAC clone RP11-713M6 from 4, complet...
40
7.7
97 gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complet...
40
7.7
98 dbj|AK165815.1| Mus musculus 13 days embryo brain cDNA, RIKEN fu...
40
7.7
99 emb|CR457405.1| Homo sapiens full open reading frame cDNA clone ...
40
7.7
100 ref|NM_001023088.1| Schizosaccharomyces pombe 972h- hypothetical...
40
7.7
101 dbj|AK089493.1| Mus musculus B6-derived CD11 +ve dendritic cells...
40
7.7
102 dbj|AB208182.1| Elephas maximus DNA, AfroSINE locus Ma158
40
7.7
103 dbj|AB208181.1| Loxodonta africana DNA, AfroSINE locus Ma158
40
7.7
104 gb|AC048340.24| Homo sapiens 12 BAC RP11-469A24 (Roswell Park Ca...
40
7.7
105 gb|AC159712.7| Mus musculus BAC RP23-236J3 (Roswell Park Cancer...
40
7.7
106 dbj|D55654.1|HUMCMD Homo sapiens mRNA for cytosolic malate dehyd...
40
7.7
107 gb|AC016734.7| Homo sapiens BAC clone RP11-391A7 from 2, complet...
40
7.7
108 gb|AC063926.36| Homo sapiens 12 BAC RP11-117L5 (Roswell Park Can...
40
7.7
109 emb|AL928704.10| Mouse DNA sequence from clone RP23-393G10 on ch...
40
7.7
110 gb|AC158188.2| Selaginella moellendorffii clone JGIASXY-5I4, com...
40
7.7
111 dbj|AB115700.1| Cryptococcus diffluens DNA, intergenic spacer 1 ...
40
7.7
112 gb|AY725475.1| Lycopersicon esculentum cytosolic malate dehydrog...
40
7.7
113 gb|AF075269.1|AF075269 Simian immunodeficiency virus strain SIVl...
40
7.7
114 dbj|AP004609.1| Homo sapiens genomic DNA, chromosome 11q, clone:...
40
7.7
115 dbj|AP003392.2| Homo sapiens genomic DNA, chromosome 11 clone:RP...
40
7.7
116 gb|U20352.1|HSU20352 Homo sapiens malate dehydrogenase (MDHA) mR...
40
7.7
117 gb|M74695.1|HIVGP120K Human immunodeficiency virus type 1 env ge...
40
7.7
>gb| AF346003.1 |AF346003 Lolium perenne malate dehydrogenase mRNA, partial cds
Length = 587
Score = 460 bits (232), Expect = e-126
Identities = 316/344 (91%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
||||| ||||| || || |||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 344 aggcacgagtaggcgagagccttctcctccgagagctcctgggctgtggcatccatcttc 285
Query: 258 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 317
|| || |||||||| || |||||||||||||||||||||||||| |||||||||| |||
Sbjct: 284 tttcttgagaactcgtcgatcgggagcccttgaacaattgtccattcaccaccgcagcaa 225
Query: 318 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 377
||||||||||||||||||||||| |||||||| ||||||||||||||||| || || |||
Sbjct: 224 gttactgggaaggagtagataagcccagcaggcacaccgtatgaaccatcagaatacaca 165
Query: 378 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 437
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 164 cccatggaaacaaatgttccctcaggggttccgagaacccaatcacggatgtggtcacaa 105
Query: 438 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgcca 497
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 104 gcagagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcacca 45
Query: 498 cgctgctggacagtggcaatgaactccccattcagccattcatc 541
|||||||||||||||||||||||| | |||| |||||||||||
Sbjct: 44 cgctgctggacagtggcaatgaaccctgcatttagccattcatc 1
Score = 44.1 bits (22), Expect = 0.49
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 145 cttttattcaaaacatcagagc 166
||||||||||||||||||||||
Sbjct: 396 cttttattcaaaacatcagagc 375
>gb| BT016453.1 | Zea mays clone Contig286 mRNA sequence
Length = 1354
Score = 355 bits (179), Expect = 1e-94
Identities = 329/379 (86%)
Strand = Plus / Minus
Query: 189 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 248
|||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || |||
Sbjct: 1087 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 1028
Query: 249 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 308
|||||||||||||| |||||||||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 1027 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 968
Query: 309 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 368
|| ||||| ||||||||||| || || || || |||| ||| |||||||||||||||||
Sbjct: 967 ccactgcatgttactgggaatgaataaatgagtccagaaggaacaccgtatgaaccatca 908
Query: 369 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 428
||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||
Sbjct: 907 gagtacacacccatggaaacaaatgtaccctcaggtgttccaagaacccaatcacgaatg 848
Query: 429 tgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgatt 488
|| |||||||| ||||| ||||| |||||||||||||||| ||| |||||||| ||||||
Sbjct: 847 tggtcacaagcagagctagcagccgagagagcactggagaactttctcgctttaatgatt 788
Query: 489 gcagcgccacgctgctggacagtggcaatgaactccccattcagccattcatcatcttga 548
||||| |||||||| |||||||| | ||||| || ||||| ||||| || |||||
Sbjct: 787 gcagcaccacgctgttggacagttgtgatgaattcaccattaagccactcgtcatcagag 728
Query: 549 acaagttcacgaacaggct 567
||||| |||||||||||||
Sbjct: 727 acaagctcacgaacaggct 709
>gb| AF007581.1 |AF007581 Zea mays cytoplasmic malate dehydrogenase mRNA, complete cds
Length = 1275
Score = 355 bits (179), Expect = 1e-94
Identities = 329/379 (86%)
Strand = Plus / Minus
Query: 189 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 248
|||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || |||
Sbjct: 1078 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 1019
Query: 249 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 308
|||||||||||||| |||||||||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 1018 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 959
Query: 309 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 368
|| ||||| ||||||||||| || || || || |||| ||| |||||||||||||||||
Sbjct: 958 ccactgcatgttactgggaatgaataaatgagtccagaaggaacaccgtatgaaccatca 899
Query: 369 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 428
||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||
Sbjct: 898 gagtacacacccatggaaacaaatgtaccctcaggtgttccaagaacccaatcacgaatg 839
Query: 429 tgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgatt 488
|| |||||||| ||||| ||||| |||||||||||||||| ||| |||||||| ||||||
Sbjct: 838 tggtcacaagcagagctagcagccgagagagcactggagaactttctcgctttaatgatt 779
Query: 489 gcagcgccacgctgctggacagtggcaatgaactccccattcagccattcatcatcttga 548
||||| |||||||| |||||||| | ||||| || ||||| ||||| || |||||
Sbjct: 778 gcagcaccacgctgttggacagttgtgatgaattcaccattaagccactcgtcatcagag 719
Query: 549 acaagttcacgaacaggct 567
||||| |||||||||||||
Sbjct: 718 acaagctcacgaacaggct 700
>gb| AF379609.1 |AF379609 Zea mays malate dehydrogenase mRNA, partial cds
Length = 529
Score = 347 bits (175), Expect = 2e-92
Identities = 286/323 (88%)
Strand = Plus / Minus
Query: 189 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 248
|||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || |||
Sbjct: 335 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 276
Query: 249 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 308
|||||||||||||| |||||||||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 275 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 216
Query: 309 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 368
|| ||||| ||||||||||| || || || || |||| ||| |||||||||||||||||
Sbjct: 215 ccactgcatgttactgggaatgaataaatgagtccagaaggaacaccgtatgaaccatca 156
Query: 369 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 428
||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||
Sbjct: 155 gagtacacacccatggaaacaaatgtaccctcaggtgttccaagaacccaatcacgaatg 96
Query: 429 tgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgatt 488
|| |||||||| ||||| ||||| |||||||||||||||| ||| |||||||| ||||||
Sbjct: 95 tggtcacaagcagagctagcagccgagagagcactggagaactttctcgctttaatgatt 36
Query: 489 gcagcgccacgctgctggacagt 511
||||| |||||||| ||||||||
Sbjct: 35 gcagcaccacgctgttggacagt 13
>gb| AY109362.1 | Zea mays CL1892_2 mRNA sequence
Length = 943
Score = 347 bits (175), Expect = 2e-92
Identities = 286/323 (88%)
Strand = Plus / Minus
Query: 189 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 248
|||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || |||
Sbjct: 916 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 857
Query: 249 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 308
|||||||||||||| |||||||||||||||||||| |||||||| ||| |||| ||||||
Sbjct: 856 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 797
Query: 309 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 368
|| ||||| ||||||||||| || || || || |||| ||| |||||||||||||||||
Sbjct: 796 ccactgcatgttactgggaatgaataaatgagtccagaaggaacaccgtatgaaccatca 737
Query: 369 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 428
||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||
Sbjct: 736 gagtacacacccatggaaacaaatgtaccctcaggtgttccaagaacccaatcacgaatg 677
Query: 429 tgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgatt 488
|| |||||||| ||||| ||||| |||||||||||||||| ||| |||||||| ||||||
Sbjct: 676 tggtcacaagcagagctagcagccgagagagcactggagaactttctcgctttaatgatt 617
Query: 489 gcagcgccacgctgctggacagt 511
||||| |||||||| ||||||||
Sbjct: 616 gcagcaccacgctgttggacagt 594
>ref| NM_197014.1 | Oryza sativa (japonica cultivar-group) cytoplasmic malate
dehydrogenase (OSJNBa0055P24.3), mRNA
Length = 1381
Score = 323 bits (163), Expect = 4e-85
Identities = 274/311 (88%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1090 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1031
Query: 258 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 317
||||| |||||||| || |||||||| || |||||||| ||||| || ||||| |||||
Sbjct: 1030 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 971
Query: 318 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 377
||||||||||| |||||||| ||||||||||| ||||| || |||||||| ||||| |||
Sbjct: 970 gttactgggaacgagtagatcagaccagcaggcacaccatacgaaccatcagagtacaca 911
Query: 378 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 437
|||||||| ||||||||||||||||| || || |||||||||||||| |||||||| ||
Sbjct: 910 cccatggagacaaatgttccctcaggagtgccaagaacccagtcacgaatgtgatcgcat 851
Query: 438 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgcca 497
|| |||||||||||||| || |||||||| |||||||||| |||||||| || || |||
Sbjct: 850 gcagagctggcagcagatagggcactggattgcttcctcgccttgatgatggcggcacca 791
Query: 498 cgctgctggac 508
|||||||||||
Sbjct: 790 cgctgctggac 780
>dbj| AK066396.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013064D20, full
insert sequence
Length = 1392
Score = 323 bits (163), Expect = 4e-85
Identities = 274/311 (88%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1101 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1042
Query: 258 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 317
||||| |||||||| || |||||||| || |||||||| ||||| || ||||| |||||
Sbjct: 1041 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 982
Query: 318 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 377
||||||||||| |||||||| ||||||||||| ||||| || |||||||| ||||| |||
Sbjct: 981 gttactgggaacgagtagatcagaccagcaggcacaccatacgaaccatcagagtacaca 922
Query: 378 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 437
|||||||| ||||||||||||||||| || || |||||||||||||| |||||||| ||
Sbjct: 921 cccatggagacaaatgttccctcaggagtgccaagaacccagtcacgaatgtgatcgcat 862
Query: 438 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgcca 497
|| |||||||||||||| || |||||||| |||||||||| |||||||| || || |||
Sbjct: 861 gcagagctggcagcagatagggcactggattgcttcctcgccttgatgatggcggcacca 802
Query: 498 cgctgctggac 508
|||||||||||
Sbjct: 801 cgctgctggac 791
>dbj| AK104691.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G07, full
insert sequence
Length = 1326
Score = 315 bits (159), Expect = 9e-83
Identities = 273/311 (87%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1096 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1037
Query: 258 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 317
||||| |||||||| || |||||||| || |||||||| ||||| || ||||| |||||
Sbjct: 1036 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 977
Query: 318 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 377
||||||||||| |||||||| ||||||||||| ||||| || || ||||| ||||| |||
Sbjct: 976 gttactgggaacgagtagatcagaccagcaggcacaccatacgagccatcagagtacaca 917
Query: 378 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 437
|||||||| ||||||||||||||||| || || |||||||||||||| |||||||| ||
Sbjct: 916 cccatggagacaaatgttccctcaggagtgccaagaacccagtcacgaatgtgatcgcat 857
Query: 438 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgcca 497
|| |||||||||||||| || |||||||| |||||||||| |||||||| || || |||
Sbjct: 856 gcagagctggcagcagatagggcactggattgcttcctcgccttgatgatggcggcacca 797
Query: 498 cgctgctggac 508
|||||||||||
Sbjct: 796 cgctgctggac 786
>gb| AF353203.1 | Oryza sativa cytoplasmic malate dehydrogenase mRNA, complete cds
Length = 1371
Score = 315 bits (159), Expect = 9e-83
Identities = 273/311 (87%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1081 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1022
Query: 258 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 317
||||| |||||||| || |||||||| || |||||||| ||||| || ||||| |||||
Sbjct: 1021 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 962
Query: 318 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 377
||||| ||||| |||||||| ||||||||||| ||||| || |||||||| ||||| |||
Sbjct: 961 gttaccgggaacgagtagatcagaccagcaggcacaccatacgaaccatcagagtacaca 902
Query: 378 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 437
|||||||| ||||||||||||||||| || || |||||||||||||| |||||||| ||
Sbjct: 901 cccatggagacaaatgttccctcaggagtgccaagaacccagtcacgaatgtgatcgcat 842
Query: 438 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgcca 497
|| |||||||||||||| || |||||||| |||||||||| |||||||| || || |||
Sbjct: 841 gcagagctggcagcagatagggcactggattgcttcctcgccttgatgatggcggcacca 782
Query: 498 cgctgctggac 508
|||||||||||
Sbjct: 781 cgctgctggac 771
>gb| AY236152.1 | Triticum aestivum cytosolic malate dehydrogenase mRNA, partial cds
Length = 683
Score = 278 bits (140), Expect = 2e-71
Identities = 146/148 (98%)
Strand = Plus / Minus
Query: 420 tcacggatgtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tcacggatgtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgct 624
Query: 480 ttgatgattgcagcgccacgctgctggacagtggcaatgaactccccattcagccattca 539
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 623 ttgatgattgcagcaccacgctgctggacagtggcaatgaactccccatttagccattca 564
Query: 540 tcatcttgaacaagttcacgaacaggct 567
||||||||||||||||||||||||||||
Sbjct: 563 tcatcttgaacaagttcacgaacaggct 536
>gb| DQ083217.1 | Oryza sativa (indica cultivar-group) clone 8S3C18 mRNA sequence
Length = 360
Score = 188 bits (95), Expect = 1e-44
Identities = 155/175 (88%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 175 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 116
Query: 258 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 317
||||| |||||||| || |||||||| || |||||||| ||||| || ||||| |||||
Sbjct: 115 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 56
Query: 318 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagt 372
||||||||||| |||||||| ||||||||||| ||||| || |||||||| ||||
Sbjct: 55 gttactgggaacgagtagatcagaccagcaggcacaccatacgaaccatcagagt 1
>gb| DQ225182.1 | Lycopersicon chilense malate dehydrogenase mRNA, complete cds
Length = 1005
Score = 167 bits (84), Expect = 5e-38
Identities = 294/364 (80%)
Strand = Plus / Minus
Query: 196 caaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatct 255
||||||| |||||||||| || || ||||| || || |||| ||| ||| |||| ||
Sbjct: 1000 caaggcaggagtaagccaatgctttttcctctgatagttcctcggctgtcaagtccaact 941
Query: 256 tcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgc 315
|||| || |||||||| ||||| || || ||||||||||| | ||| || ||| |||
Sbjct: 940 tctttcttgagaactcgtcaattggaagaccttgaacaatggaccattctccatttttgc 881
Query: 316 acgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaa 375
| || ||||||||||| || ||||| |||| |||||| |||||| ||||| |||||||
Sbjct: 880 atgtaactgggaaggaataaataagcccagatgggacattgtatgacccatcagagtaaa 821
Query: 376 cacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcac 435
||||||| |||||||| |||||||| || ||||| || ||||||||||| ||||||||||
Sbjct: 820 cacccatagaaacaaaagttccctctggagttccaaggacccagtcacgaatgtgatcac 761
Query: 436 aagctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgc 495
|||| || || ||||| ||||| ||||| || ||||| || |||||||| || ||||| |
Sbjct: 760 aagcagaactagcagcggagagggcactagaaagctttctagctttgataatggcagcac 701
Query: 496 cacgctgctggacagtggcaatgaactccccattcagccattcatcatcttgaacaagtt 555
| | |||||| ||||| | ||||||||| || |||| |||| ||||||| ||||||||
Sbjct: 700 ccctctgctgtacagtagaaatgaactcaccgttcaaccatgcatcatcagcaacaagtt 641
Query: 556 cacg 559
||||
Sbjct: 640 cacg 637
>ref| NM_123699.2 | Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT5G43330
mRNA, complete cds
Length = 1308
Score = 147 bits (74), Expect = 5e-32
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| || ||||||| ||| || ||||| || ||| ||||||||||
Sbjct: 1111 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 1052
Query: 258 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 317
|||||||| ||||||||||| | ||||||||||| ||||| || ||| | |||
Sbjct: 1051 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 992
Query: 318 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 377
||||| ||||||||||||||||| ||||| || ||| ||| || ||||| ||||| ||
Sbjct: 991 gttacggggaaggagtagataagtccagctggaacattgtaggatccatctgagtatact 932
Query: 378 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 437
||||| ||||||||||| |||||||| ||||| | |||||| |||||||| || ||||||
Sbjct: 931 cccattgaaacaaatgtgccctcaggtgttccaacaacccaatcacggatatggtcacaa 872
Query: 438 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgcca 497
|||||||| || ||||| || ||||| || |||||||| || ||||| || ||||| |||
Sbjct: 871 gctgagctagctgcagaaagtgcactagacagcttcctggccttgataatggcagcacca 812
Query: 498 cg 499
||
Sbjct: 811 cg 810
>gb| AY091220.1 | Arabidopsis thaliana putative cytosolic malate dehydrogenase
(At5g43330) mRNA, complete cds
Length = 1030
Score = 147 bits (74), Expect = 5e-32
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| || ||||||| ||| || ||||| || ||| ||||||||||
Sbjct: 992 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 933
Query: 258 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 317
|||||||| ||||||||||| | ||||||||||| ||||| || ||| | |||
Sbjct: 932 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 873
Query: 318 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 377
||||| ||||||||||||||||| ||||| || ||| ||| || ||||| ||||| ||
Sbjct: 872 gttacggggaaggagtagataagtccagctggaacattgtaggatccatctgagtatact 813
Query: 378 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 437
||||| ||||||||||| |||||||| ||||| | |||||| |||||||| || ||||||
Sbjct: 812 cccattgaaacaaatgtgccctcaggtgttccaacaacccaatcacggatatggtcacaa 753
Query: 438 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgcca 497
|||||||| || ||||| || ||||| || |||||||| || ||||| || ||||| |||
Sbjct: 752 gctgagctagctgcagaaagtgcactagacagcttcctggccttgataatggcagcacca 693
Query: 498 cg 499
||
Sbjct: 692 cg 691
>gb| AY072137.1 | Arabidopsis thaliana putative cytosolic malate dehydrogenase
(At5g43330) mRNA, complete cds
Length = 1198
Score = 147 bits (74), Expect = 5e-32
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| || ||||||| ||| || ||||| || ||| ||||||||||
Sbjct: 1065 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 1006
Query: 258 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 317
|||||||| ||||||||||| | ||||||||||| ||||| || ||| | |||
Sbjct: 1005 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 946
Query: 318 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 377
||||| ||||||||||||||||| ||||| || ||| ||| || ||||| ||||| ||
Sbjct: 945 gttacggggaaggagtagataagtccagctggaacattgtaggatccatctgagtatact 886
Query: 378 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 437
||||| ||||||||||| |||||||| ||||| | |||||| |||||||| || ||||||
Sbjct: 885 cccattgaaacaaatgtgccctcaggtgttccaacaacccaatcacggatatggtcacaa 826
Query: 438 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgcca 497
|||||||| || ||||| || ||||| || |||||||| || ||||| || ||||| |||
Sbjct: 825 gctgagctagctgcagaaagtgcactagacagcttcctggccttgataatggcagcacca 766
Query: 498 cg 499
||
Sbjct: 765 cg 764
>ref| NM_100321.2 | Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT1G04410
mRNA, complete cds
Length = 1484
Score = 143 bits (72), Expect = 7e-31
Identities = 207/252 (82%)
Strand = Plus / Minus
Query: 248 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 307
||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || ||
Sbjct: 1087 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 1028
Query: 308 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 367
| || || ||||| ||||||||||||||||| || | || || | ||| || |||||
Sbjct: 1027 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 968
Query: 368 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 427
||||| || ||||||||||| || || ||||| || ||||| || ||||||||||||||
Sbjct: 967 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 908
Query: 428 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 487
||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| ||||||||
Sbjct: 907 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 848
Query: 488 tgcagcgccacg 499
|||||| |||||
Sbjct: 847 tgcagctccacg 836
>gb| AY133655.1 | Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds
Length = 999
Score = 143 bits (72), Expect = 7e-31
Identities = 207/252 (82%)
Strand = Plus / Minus
Query: 248 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 307
||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || ||
Sbjct: 942 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 883
Query: 308 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 367
| || || ||||| ||||||||||||||||| || | || || | ||| || |||||
Sbjct: 882 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 823
Query: 368 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 427
||||| || ||||||||||| || || ||||| || ||||| || ||||||||||||||
Sbjct: 822 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 763
Query: 428 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 487
||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| ||||||||
Sbjct: 762 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 703
Query: 488 tgcagcgccacg 499
|||||| |||||
Sbjct: 702 tgcagctccacg 691
>gb| AY081563.1 | Arabidopsis thaliana unknown protein (At1g04410) mRNA, complete cds
Length = 1223
Score = 143 bits (72), Expect = 7e-31
Identities = 207/252 (82%)
Strand = Plus / Minus
Query: 248 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 307
||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || ||
Sbjct: 942 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 883
Query: 308 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 367
| || || ||||| ||||||||||||||||| || | || || | ||| || |||||
Sbjct: 882 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 823
Query: 368 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 427
||||| || ||||||||||| || || ||||| || ||||| || ||||||||||||||
Sbjct: 822 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 763
Query: 428 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 487
||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| ||||||||
Sbjct: 762 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 703
Query: 488 tgcagcgccacg 499
|||||| |||||
Sbjct: 702 tgcagctccacg 691
>gb| AY065134.1 | Arabidopsis thaliana unknown protein (At1g04410; F19P19.13) mRNA,
complete cds
Length = 1314
Score = 143 bits (72), Expect = 7e-31
Identities = 207/252 (82%)
Strand = Plus / Minus
Query: 248 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 307
||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || ||
Sbjct: 1028 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 969
Query: 308 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 367
| || || ||||| ||||||||||||||||| || | || || | ||| || |||||
Sbjct: 968 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 909
Query: 368 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 427
||||| || ||||||||||| || || ||||| || ||||| || ||||||||||||||
Sbjct: 908 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 849
Query: 428 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 487
||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| ||||||||
Sbjct: 848 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 789
Query: 488 tgcagcgccacg 499
|||||| |||||
Sbjct: 788 tgcagctccacg 777
>gb| AY050374.1 | Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds
Length = 1309
Score = 143 bits (72), Expect = 7e-31
Identities = 207/252 (82%)
Strand = Plus / Minus
Query: 248 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 307
||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || ||
Sbjct: 1024 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 965
Query: 308 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 367
| || || ||||| ||||||||||||||||| || | || || | ||| || |||||
Sbjct: 964 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 905
Query: 368 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 427
||||| || ||||||||||| || || ||||| || ||||| || ||||||||||||||
Sbjct: 904 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 845
Query: 428 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 487
||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| ||||||||
Sbjct: 844 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 785
Query: 488 tgcagcgccacg 499
|||||| |||||
Sbjct: 784 tgcagctccacg 773
>emb| BX815185.1 |CNS0ACZH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS3ZH07 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 541
Score = 143 bits (72), Expect = 7e-31
Identities = 207/252 (82%)
Strand = Plus / Minus
Query: 248 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 307
||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || ||
Sbjct: 252 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccactctcc 193
Query: 308 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 367
| || || ||||| ||||||||||||||||| || | || || | ||| || |||||
Sbjct: 192 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 133
Query: 368 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 427
||||| || ||||||||||| || || ||||| || ||||| || ||||||||||||||
Sbjct: 132 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 73
Query: 428 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 487
||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| ||||||||
Sbjct: 72 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 13
Query: 488 tgcagcgccacg 499
|||||| |||||
Sbjct: 12 tgcagctccacg 1
>emb| BX815710.1 |CNS0ACSG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS87ZA02 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 600
Score = 143 bits (72), Expect = 7e-31
Identities = 207/252 (82%)
Strand = Plus / Minus
Query: 248 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 307
||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || ||
Sbjct: 317 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 258
Query: 308 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 367
| || || ||||| ||||||||||||||||| || | || || | ||| || |||||
Sbjct: 257 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 198
Query: 368 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 427
||||| || ||||||||||| || || ||||| || ||||| || ||||||||||||||
Sbjct: 197 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 138
Query: 428 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 487
||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| ||||||||
Sbjct: 137 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 78
Query: 488 tgcagcgccacg 499
|||||| |||||
Sbjct: 77 tgcagctccacg 66
>gb| AY088023.1 | Arabidopsis thaliana clone 40467 mRNA, complete sequence
Length = 1351
Score = 143 bits (72), Expect = 7e-31
Identities = 207/252 (82%)
Strand = Plus / Minus
Query: 248 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 307
||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || ||
Sbjct: 1064 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 1005
Query: 308 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 367
| || || ||||| ||||||||||||||||| || | || || | ||| || |||||
Sbjct: 1004 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 945
Query: 368 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 427
||||| || ||||||||||| || || ||||| || ||||| || ||||||||||||||
Sbjct: 944 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 885
Query: 428 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 487
||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| ||||||||
Sbjct: 884 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 825
Query: 488 tgcagcgccacg 499
|||||| |||||
Sbjct: 824 tgcagctccacg 813
>emb| X96539.1 |MCMDH M.crystallinum mRNA for malate dehydrogenase
Length = 1273
Score = 139 bits (70), Expect = 1e-29
Identities = 205/250 (82%)
Strand = Plus / Minus
Query: 318 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 377
||||||||||||||||| || | ||||| || ||| ||| || ||||| || || |||
Sbjct: 958 gttactgggaaggagtaaatgattccagctggcacattgtacgagccatcagaatacaca 899
Query: 378 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 437
||||| || || |||||||||| |||||||| || ||||| ||| ||||||||||||||
Sbjct: 898 cccatagatacccatgttccctctggggttccaagcacccaatcatggatgtgatcacaa 839
Query: 438 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgcca 497
|| || || ||||| || | ||||||||||||||||| || |||||||| ||||| |||
Sbjct: 838 gcagaactagcagctgacaatgcactggagagcttccttgccttgatgatggcagctcca 779
Query: 498 cgctgctggacagtggcaatgaactccccattcagccattcatcatcttgaacaagttca 557
||||| || ||||| | |||||||| ||||||| |||| ||||||| |||||| |||
Sbjct: 778 cgctgttgcacagttgttatgaactctccattcaaccatgcatcatcagcaacaagctca 719
Query: 558 cgaacaggct 567
||||||||||
Sbjct: 718 cgaacaggct 709
>gb| AY087986.1 | Arabidopsis thaliana clone 40174 mRNA, complete sequence
Length = 1239
Score = 139 bits (70), Expect = 1e-29
Identities = 244/302 (80%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| || ||||||| ||| || ||||| || ||| ||||||||||
Sbjct: 1065 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 1006
Query: 258 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 317
|||||||| ||||||||||| | ||||||||||| ||||| || ||| | |||
Sbjct: 1005 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 946
Query: 318 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 377
||||| ||||||||||||||||| ||||| || ||| ||| || ||||| ||||| ||
Sbjct: 945 gttacggggaaggagtagataagtccagctggaacattgtaggatccatctgagtatact 886
Query: 378 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 437
||||| ||||||||||| ||||| || ||||| | |||||| |||||||| || ||||||
Sbjct: 885 cccattgaaacaaatgtgccctcgggtgttccaacaacccaatcacggatatggtcacaa 826
Query: 438 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgcca 497
|||||||| || ||||| || ||||| || |||||||| || ||||| || ||||| |||
Sbjct: 825 gctgagctagctgcagaaagtgcactagacagcttcctggccttgataatggcagcacca 766
Query: 498 cg 499
||
Sbjct: 765 cg 764
>emb| AJ251083.1 |BVU251083 Beta vulgaris mRNA for putative malate dehydrogenase (nr1 gene)
Length = 999
Score = 137 bits (69), Expect = 4e-29
Identities = 183/221 (82%)
Strand = Plus / Minus
Query: 324 gggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaacacccatg 383
|||||||||||||||| ||||| || || |||||| ||||| ||||| ||||||||
Sbjct: 866 gggaaggagtagataattccagctggtacgttgtatgagccatcagagtacacacccata 807
Query: 384 gaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaagctgag 443
||||| | |||||||| |||||||| || ||||| |||||||||||||||||||| ||
Sbjct: 806 gaaacccaagttccctctggggttccaagcacccaatcacggatgtgatcacaagcagaa 747
Query: 444 ctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgccacgctgc 503
|| ||||| || | ||||||||| |||||||| ||||||||||| ||||| ||||| ||
Sbjct: 746 ctagcagctgacaaagcactggaaagcttccttgctttgatgatggcagcaccacgttgt 687
Query: 504 tggacagtggcaatgaactccccattcagccattcatcatc 544
|| ||||| | |||||||| ||||| | |||| |||||||
Sbjct: 686 tgcacagttgttatgaactctccatttaaccatgcatcatc 646
>gb| AF367442.1 | Prunus persica clone Mdh1 NAD-dependent malate dehydrogenase (mdh1)
mRNA, complete cds
Length = 1491
Score = 137 bits (69), Expect = 4e-29
Identities = 261/325 (80%)
Strand = Plus / Minus
Query: 240 gcggtcgcatccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtc 299
||||| || |||| ||||||||| ||||| || ||||| | ||||||||||||||| ||
Sbjct: 950 gcggttgcgtccaacttcttcctagagaattcgtcaatagagagcccttgaacaatcttc 891
Query: 300 caatcaccaccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtat 359
|| || ||| ||| || |||||||| ||||| || ||||||| ||| ||| ||||
Sbjct: 890 cactccccattttggcaagtgactgggaatgagtaaatgagaccagaaggaacattgtat 831
Query: 360 gaaccatccgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccag 419
|| ||||| ||||| |||||||||||||| | || ||||| |||||||| || |||||
Sbjct: 830 gagccatcagagtacacacccatggaaacccaggtgccctcgggggttccaagtacccaa 771
Query: 420 tcacggatgtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgct 479
||||| |||||||||||||| ||||| |||||||| | || ||||| ||||| | ||
Sbjct: 770 tcacgaatgtgatcacaagcagagctagcagcagataatgccctggacagcttacgagcc 711
Query: 480 ttgatgattgcagcgccacgctgctggacagtggcaatgaactccccattcagccattca 539
|||||||||||||| ||||| || || ||||||| |||||| || || ||| |||| ||
Sbjct: 710 ttgatgattgcagcaccacgttgttgaacagtggtaatgaattctccggtcaaccatgca 651
Query: 540 tcatcttgaacaagttcacgaacag 564
||||| |||||| ||||||||||
Sbjct: 650 tcatcagcaacaagctcacgaacag 626
>emb| AM040268.1 | Capsicum chinense partial mRNA for cytosolic malate dehydrogenase
(mdh gene)
Length = 773
Score = 135 bits (68), Expect = 2e-28
Identities = 278/348 (79%)
Strand = Plus / Minus
Query: 197 aaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatctt 256
|||||| |||||||||| || || |||||||| ||||||| || ||| |||| |||
Sbjct: 546 aaggcaggagtaagccaatgctttttcctccgatagctcctcagctgtcaagtccaactt 487
Query: 257 cttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgca 316
||| || |||||||| ||||| || || ||||||||||| | ||| || ||| ||||
Sbjct: 486 ctttcttgagaactcgtcaattggaagaccttgaacaatggaccattctccatttttgca 427
Query: 317 cgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaac 376
|| ||||||||||| || || || ||||| |||||| |||||| ||||| ||||||||
Sbjct: 426 tgtaactgggaaggaataaatgagcccagctgggacattgtatgacccatcagagtaaac 367
Query: 377 acccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcaca 436
|||||| |||||||| || ||||| || ||||| || ||||| || || |||||||||||
Sbjct: 366 acccatagaaacaaaagtaccctctggagttccaaggacccaatcgcgaatgtgatcaca 307
Query: 437 agctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgcc 496
||| || || |||||||| ||||| || || ||||| || || ||||| || ||||| ||
Sbjct: 306 agcagaactagcagcagaaagagcgctagaaagctttctagccttgataatggcagcacc 247
Query: 497 acgctgctggacagtggcaatgaactccccattcagccattcatcatc 544
| |||||| ||||| | ||||||||| || |||| |||| |||||||
Sbjct: 246 cctctgctgtacagtagtaatgaactcaccgttcaaccatgcatcatc 199
>emb| AJ843126.1 | Plantago major mRNA for malate dehydrogenase (mdh1 gene)
Length = 1353
Score = 131 bits (66), Expect = 3e-27
Identities = 255/318 (80%)
Strand = Plus / Minus
Query: 248 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 307
||||| ||| ||||| |||||||||||||| || || ||||||||||| | ||| || ||
Sbjct: 1005 atccaactttttccttgagaactcatcaatgggaagtccttgaacaatcgaccattctcc 946
Query: 308 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 367
| |||| || |||||||| ||||| || | ||||| || ||| ||| || |||||
Sbjct: 945 attcttgcaagtcactgggaatgagtaaattaatccagctggtacattgtacgagccatc 886
Query: 368 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 427
||||| |||||||||||||| | || ||||| || ||||||| ||||| ||||| ||
Sbjct: 885 agagtatacacccatggaaacccaggtaccctctggagttcccaagacccaatcacgaat 826
Query: 428 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 487
||| |||||||| ||||| |||||||| |||||||| || | |||||| || ||||| ||
Sbjct: 825 gtggtcacaagcagagctagcagcagaaagagcactagaaaacttcctagccttgataat 766
Query: 488 tgcagcgccacgctgctggacagtggcaatgaactccccattcagccattcatcatcttg 547
||||| ||||||||||||||||| | ||||||||| ||||| ||||| |||||
Sbjct: 765 ggcagcaccacgctgctggacagttgaaatgaactcggtattcaaccattggtcatcagc 706
Query: 548 aacaagttcacgaacagg 565
|||||| |||||||||||
Sbjct: 705 aacaagctcacgaacagg 688
>gb| DQ294258.1 | Solanum tuberosum clone 093D06 malate dehydrogenase-like protein
mRNA, complete cds
Length = 1220
Score = 129 bits (65), Expect = 1e-26
Identities = 182/221 (82%)
Strand = Plus / Minus
Query: 324 gggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaacacccatg 383
|||||||| || ||||| ||||| |||||| |||||| ||||| ||||||||||||||
Sbjct: 902 gggaaggaataaataagcccagctgggacattgtatgacccatcagagtaaacacccata 843
Query: 384 gaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaagctgag 443
|||||||| || ||||| || ||||| || ||||||||||| |||||||||||||| ||
Sbjct: 842 gaaacaaaagtgccctctggagttccaaggacccagtcacgaatgtgatcacaagcagaa 783
Query: 444 ctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgccacgctgc 503
|| ||||| || || ||||| || ||||| || || ||||| || ||||| || | ||||
Sbjct: 782 ctagcagcggaaagggcactagaaagctttctagccttgataatggcagcacccctctgc 723
Query: 504 tggacagtggcaatgaactccccattcagccattcatcatc 544
|| ||||| | ||||||||| || |||| |||| |||||||
Sbjct: 722 tgtacagtagaaatgaactcaccgttcaaccatgcatcatc 682
>emb| AJ299256.1 |NTA299256 Nicotiana tabacum mRNA for malate dehydrogenase (md1 gene)
Length = 1328
Score = 127 bits (64), Expect = 4e-26
Identities = 238/296 (80%)
Strand = Plus / Minus
Query: 249 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 308
|||| |||||| || |||||||||||||| || || ||||||||||| | ||| || |||
Sbjct: 996 tccaacttctttcttgagaactcatcaattggaagaccttgaacaatagaccattctcca 937
Query: 309 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 368
|||| | ||||||||||| || ||||| ||||| |||||| |||||| |||||
Sbjct: 936 tttttgcatgcaactgggaaggaataaataagcccagctgggacattgtatgacccatca 877
Query: 369 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 428
|||||||||||||| ||||| | |||||||| || ||||| || ||||| ||||| |||
Sbjct: 876 gagtaaacacccatagaaacccaagttccctctggagttccaaggacccaatcacgtatg 817
Query: 429 tgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgatt 488
||||||||||| || || ||||| || || || || || ||||| || || ||||| ||
Sbjct: 816 tgatcacaagcagaactagcagcggaaagggcgctagaaagctttctagccttgataatg 757
Query: 489 gcagcgccacgctgctggacagtggcaatgaactccccattcagccattcatcatc 544
||||| || | |||||| ||||| | ||||||||| ||||||| |||| |||||||
Sbjct: 756 gcagcacccctctgctgtacagtagaaatgaactcaccattcaaccatgcatcatc 701
>emb| AJ299059.1 |CAR299059 Cicer arietinum mRNA for cytosolic malate dehydrogenase (ORF1), clone
CanCMDH
Length = 1399
Score = 119 bits (60), Expect = 1e-23
Identities = 255/320 (79%)
Strand = Plus / Minus
Query: 248 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 307
||||| ||||||||| ||||||||||| |||| || |||||||||||| |||| || ||
Sbjct: 1008 atccaacttcttccttgagaactcatcgatcgaaagtccttgaacaattttccattcccc 949
Query: 308 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 367
|||| || || || ||||| || ||||| || ||||| || ||| ||||||||| ||
Sbjct: 948 accggcacaggtaacagggaatgaatagatcagtccagcgggtacattgtatgaaccgtc 889
Query: 368 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 427
|| || || ||||| |||||||| || |||||||| ||||| |||||||| || || ||
Sbjct: 888 agaatacactcccattgaaacaaaggtgccctcaggagttccaagaacccaatcgcgaat 829
Query: 428 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 487
||| |||||||| | || |||||||| || ||||| || | ||| || || ||||| ||
Sbjct: 828 gtggtcacaagcagcactagcagcagatagtgcacttgacaactttctagccttgataat 769
Query: 488 tgcagcgccacgctgctggacagtggcaatgaactccccattcagccattcatcatcttg 547
|||||| ||||| || || ||||| | ||||| |||||||||| ||| |||||||
Sbjct: 768 tgcagcaccacgttgttgaacagttggtatgaattccccattcaaccaggcatcatcaga 709
Query: 548 aacaagttcacgaacaggct 567
|||||||||||| |||||||
Sbjct: 708 aacaagttcacggacaggct 689
>dbj| AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 119 bits (60), Expect = 1e-23
Identities = 99/112 (88%)
Strand = Plus / Minus
Query: 288 tgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagataagaccagca 347
|||||||| ||||| || ||||| ||||| ||||||||||| |||||||| |||||||||
Sbjct: 17402292 tgaacaatcgtccattcgccaccactgcatgttactgggaacgagtagatcagaccagca 17402233
Query: 348 gggacaccgtatgaaccatccgagtaaacacccatggaaacaaatgttccct 399
|| ||||| || |||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 17402232 ggcacaccatacgaaccatcagagtacacacccatggagacaaatgttccct 17402181
Score = 115 bits (58), Expect = 2e-22
Identities = 79/86 (91%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 17402508 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 17402449
Query: 258 ttcctcgagaactcatcaatcgggag 283
||||| |||||||| || ||||||||
Sbjct: 17402448 ttccttgagaactcgtcgatcgggag 17402423
Score = 103 bits (52), Expect = 6e-19
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 397 cctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagaga 456
||||||| || || |||||||||||||| |||||||| || || |||||||||||||| |
Sbjct: 17402074 cctcaggagtgccaagaacccagtcacgaatgtgatcgcatgcagagctggcagcagata 17402015
Query: 457 gagcactggagagcttcctcgctttgatgattgcagcgccacgctgctggac 508
| |||||||| |||||||||| |||||||| || || ||||||||||||||
Sbjct: 17402014 gggcactggattgcttcctcgccttgatgatggcggcaccacgctgctggac 17401963
>gb| AC037425.7 |AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete
sequence
Length = 134058
Score = 119 bits (60), Expect = 1e-23
Identities = 99/112 (88%)
Strand = Plus / Minus
Query: 288 tgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagataagaccagca 347
|||||||| ||||| || ||||| ||||| ||||||||||| |||||||| |||||||||
Sbjct: 31287 tgaacaatcgtccattcgccaccactgcatgttactgggaacgagtagatcagaccagca 31228
Query: 348 gggacaccgtatgaaccatccgagtaaacacccatggaaacaaatgttccct 399
|| ||||| || |||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 31227 ggcacaccatacgaaccatcagagtacacacccatggagacaaatgttccct 31176
Score = 115 bits (58), Expect = 2e-22
Identities = 79/86 (91%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 31503 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 31444
Query: 258 ttcctcgagaactcatcaatcgggag 283
||||| |||||||| || ||||||||
Sbjct: 31443 ttccttgagaactcgtcgatcgggag 31418
Score = 103 bits (52), Expect = 6e-19
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 397 cctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagaga 456
||||||| || || |||||||||||||| |||||||| || || |||||||||||||| |
Sbjct: 31069 cctcaggagtgccaagaacccagtcacgaatgtgatcgcatgcagagctggcagcagata 31010
Query: 457 gagcactggagagcttcctcgctttgatgattgcagcgccacgctgctggac 508
| |||||||| |||||||||| |||||||| || || ||||||||||||||
Sbjct: 31009 gggcactggattgcttcctcgccttgatgatggcggcaccacgctgctggac 30958
>gb| AE016959.3 | Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 119 bits (60), Expect = 1e-23
Identities = 99/112 (88%)
Strand = Plus / Minus
Query: 288 tgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagataagaccagca 347
|||||||| ||||| || ||||| ||||| ||||||||||| |||||||| |||||||||
Sbjct: 17411332 tgaacaatcgtccattcgccaccactgcatgttactgggaacgagtagatcagaccagca 17411273
Query: 348 gggacaccgtatgaaccatccgagtaaacacccatggaaacaaatgttccct 399
|| ||||| || |||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 17411272 ggcacaccatacgaaccatcagagtacacacccatggagacaaatgttccct 17411221
Score = 115 bits (58), Expect = 2e-22
Identities = 79/86 (91%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 17411548 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 17411489
Query: 258 ttcctcgagaactcatcaatcgggag 283
||||| |||||||| || ||||||||
Sbjct: 17411488 ttccttgagaactcgtcgatcgggag 17411463
Score = 103 bits (52), Expect = 6e-19
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 397 cctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagaga 456
||||||| || || |||||||||||||| |||||||| || || |||||||||||||| |
Sbjct: 17411114 cctcaggagtgccaagaacccagtcacgaatgtgatcgcatgcagagctggcagcagata 17411055
Query: 457 gagcactggagagcttcctcgctttgatgattgcagcgccacgctgctggac 508
| |||||||| |||||||||| |||||||| || || ||||||||||||||
Sbjct: 17411054 gggcactggattgcttcctcgccttgatgatggcggcaccacgctgctggac 17411003
>gb| AY057442.1 | Arabidopsis thaliana ecotype Ler cryptochrome 2 (CRY2) gene,
complete cds
Length = 4649
Score = 101 bits (51), Expect = 2e-18
Identities = 84/95 (88%)
Strand = Plus / Minus
Query: 405 gttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagagagagcactg 464
||||| || ||||||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 353 gttccaaggacccagtcacggatgtggtcacaagcagagctagcagcagagagcgcacta 294
Query: 465 gagagcttcctcgctttgatgattgcagcgccacg 499
|| | ||||||||| |||||||||||||| |||||
Sbjct: 293 gacaacttcctcgccttgatgattgcagctccacg 259
>gb| AY057441.1 | Arabidopsis thaliana ecotype Cvi cryptochrome 2 (CRY2) gene,
complete cds
Length = 4659
Score = 101 bits (51), Expect = 2e-18
Identities = 84/95 (88%)
Strand = Plus / Minus
Query: 405 gttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagagagagcactg 464
||||| || ||||||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 360 gttccaaggacccagtcacggatgtggtcacaagcagagctagcagcagagagcgcacta 301
Query: 465 gagagcttcctcgctttgatgattgcagcgccacg 499
|| | ||||||||| |||||||||||||| |||||
Sbjct: 300 gacaacttcctcgccttgatgattgcagctccacg 266
>gb| AC000104.1 |F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 107527
Score = 101 bits (51), Expect = 2e-18
Identities = 84/95 (88%)
Strand = Plus / Minus
Query: 405 gttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagagagagcactg 464
||||| || ||||||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 43392 gttccaaggacccagtcacggatgtggtcacaagcagagctagcagcagagagcgcacta 43333
Query: 465 gagagcttcctcgctttgatgattgcagcgccacg 499
|| | ||||||||| |||||||||||||| |||||
Sbjct: 43332 gacaacttcctcgccttgatgattgcagctccacg 43298
>emb| BX841818.1 |CNS09Y6C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS38ZC01 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1075
Score = 91.7 bits (46), Expect = 2e-15
Identities = 147/178 (82%), Gaps = 2/178 (1%)
Strand = Plus / Minus
Query: 324 gggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaacacccatg 383
||||||||||||||||| || | || || | ||| || ||||| ||||| || ||||||
Sbjct: 939 gggaaggagtagataagtcctgatggaacgctgtaagagccatcggagtatactcccatg 880
Query: 384 gaaacaaatgttccctcaggggttcccagaaccc-agtcacggatgtgatcac-aagctg 441
||||| || || ||||| || ||||| || |||| ||||||||||||| |||| |||| |
Sbjct: 879 gaaacgaacgtaccctctggagttccaaggaccccagtcacggatgtggtcaccaagcag 820
Query: 442 agctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcgccacg 499
|||| ||||||||||| ||||| || | || |||||| |||||||||||||| |||||
Sbjct: 819 agctagcagcagagagcgcactagacaactccctcgccttgatgattgcagctccacg 762
>gb| AF459645.1 | Lupinus albus malate dehydrogenase (MDH1) mRNA, complete cds
Length = 1290
Score = 87.7 bits (44), Expect = 4e-14
Identities = 140/172 (81%)
Strand = Plus / Minus
Query: 396 ccctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagag 455
|||||||| ||||| |||||||| || | ||||| |||||||| | || ||||||||
Sbjct: 846 ccctcaggagttccaagaacccaatctctaatgtggtcacaagcagcactagcagcagat 787
Query: 456 agagcactggagagcttcctcgctttgatgattgcagcgccacgctgctggacagtggca 515
|| ||||| || ||||| || ||||| || |||||||| ||||| || |||||||| ||
Sbjct: 786 agtgcacttgaaagctttctagctttaataattgcagcaccacgttgttggacagtagct 727
Query: 516 atgaactccccattcagccattcatcatcttgaacaagttcacgaacaggct 567
||||| ||| ||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 726 atgaattccgaattcaaccatgcatcatcagcaacaagttcacgaacaggct 675
>gb| AF459646.1 | Lupinus albus malate dehydrogenase (MDH2) mRNA, complete cds
Length = 1277
Score = 71.9 bits (36), Expect = 2e-09
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 393 gttccctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagca 452
||||||||||| ||||| |||||||| || | ||||| |||||||| | || ||||||
Sbjct: 848 gttccctcaggagttccaagaacccaatctctaatgtggtcacaagcagcactagcagca 789
Query: 453 gagagagcactggagagcttcctcgctttgatgattgcagcgccacgctgctggacagtg 512
|| || ||||| || ||||| || |||||||| |||||||| ||||| || |||||||||
Sbjct: 788 gatagtgcacttgaaagctttctagctttgataattgcagcaccacgttgttggacagtg 729
>gb| AY485993.1 | Pinus pinaster malate dehydrogenase (mdh) mRNA, complete cds
Length = 1413
Score = 69.9 bits (35), Expect = 9e-09
Identities = 113/139 (81%)
Strand = Plus / Minus
Query: 375 acacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatca 434
|||||||| ||||||||||| |||| ||| || || || ||||| |||||||| |||||
Sbjct: 831 acacccattgaaacaaatgtacccttaggtgtaccaagcacccaatcacggatatgatcg 772
Query: 435 caagctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagcg 494
|| || || || |||||||| || ||||| || ||||||| || ||||| ||||| ||
Sbjct: 771 catgcggaactagcagcagatagtgcactagacagcttccgtgccttgataattgctgca 712
Query: 495 ccacgctgctggacagtgg 513
||||| ||||| |||||||
Sbjct: 711 ccacgttgctgtacagtgg 693
>dbj| AB025638.1 | Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWF20
Length = 91193
Score = 69.9 bits (35), Expect = 9e-09
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 397 cctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagaga 456
||||||| ||||| | |||||| |||||||| || |||||||||||||| || ||||| |
Sbjct: 7064 cctcaggtgttccaacaacccaatcacggatatggtcacaagctgagctagctgcagaaa 7005
Query: 457 gagcactggagagcttcctcgctttgatgattgcagcgccacg 499
| ||||| || |||||||| || ||||| || ||||| |||||
Sbjct: 7004 gtgcactagacagcttcctggccttgataatggcagcaccacg 6962
Score = 61.9 bits (31), Expect = 2e-06
Identities = 94/115 (81%)
Strand = Plus / Minus
Query: 285 ccttgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagataagacca 344
||||||||||| ||||| || ||| | ||| ||||| ||||||||||||||||| |||
Sbjct: 7264 ccttgaacaatggtccactctccattacggcaggttacggggaaggagtagataagtcca 7205
Query: 345 gcagggacaccgtatgaaccatccgagtaaacacccatggaaacaaatgttccct 399
|| || ||| ||| || ||||| ||||| || ||||| ||||||||||| ||||
Sbjct: 7204 gctggaacattgtaggatccatctgagtatactcccattgaaacaaatgtgccct 7150
Score = 40.1 bits (20), Expect = 7.7
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 257
|||||||||||||| || ||||||| ||| || ||||| || ||| ||||||||||
Sbjct: 7544 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 7485
Query: 258 ttcctcga 265
||||||||
Sbjct: 7484 ttcctcga 7477
>gb| DQ167567.1 | Zea mays clone MCI21 mRNA sequence
Length = 282
Score = 65.9 bits (33), Expect = 1e-07
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 189 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggc 241
|||||||| |||||||||||||| |||| ||||||||||| |||||| |||||
Sbjct: 60 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggc 8
>gb| AY496910.1 | Glycine max cytosolic malate dehydrogenase mRNA, complete cds
Length = 1312
Score = 65.9 bits (33), Expect = 1e-07
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 396 ccctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagag 455
|||| ||| ||||| ||||||||||| | || || |||||||| | || ||||| ||
Sbjct: 846 ccctgaggagttccaagaacccagtctctaatatggtcacaagcagcactagcagctgat 787
Query: 456 agagcactggagagcttcctcgctttgatgattgcagcgccacgctgctggacagtggca 515
|| ||||| || ||||| || |||||||| |||||||||||||| || || ||||| | |
Sbjct: 786 agtgcacttgaaagctttctagctttgataattgcagcgccacgttgttgaacagtagta 727
Query: 516 atgaactccccattcagccattcatcatc 544
||||| |||||||||| ||| |||||||
Sbjct: 726 atgaattccccattcaaccaggcatcatc 698
Score = 42.1 bits (21), Expect = 1.9
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 198 aggcatgagtaagccagcgccttctcctc 226
|||||||||||||||| |||||||||||
Sbjct: 1044 aggcatgagtaagccaatgccttctcctc 1016
>gb| AY161295.1 | Danio rerio cytosolic malate dehydrogenase B (mdhB) mRNA, complete
cds
Length = 1048
Score = 65.9 bits (33), Expect = 1e-07
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 459 gcactggagagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatg 518
||||||||||| ||||| |||||||||| |||||| ||||||||||| || || | ||||
Sbjct: 750 gcactggagagtttcctggctttgatgactgcagcaccacgctgctgcaccgtagaaatg 691
Query: 519 aactccccattcagcca 535
|| || || ||||||||
Sbjct: 690 aattctcccttcagcca 674
>ref| NM_199969.1 | Danio rerio malate dehydrogenase 1b, NAD (soluble) (mdh1b), mRNA
Length = 1751
Score = 65.9 bits (33), Expect = 1e-07
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 459 gcactggagagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatg 518
||||||||||| ||||| |||||||||| |||||| ||||||||||| || || | ||||
Sbjct: 862 gcactggagagtttcctggctttgatgactgcagcaccacgctgctgcaccgtagaaatg 803
Query: 519 aactccccattcagcca 535
|| || || ||||||||
Sbjct: 802 aattctcccttcagcca 786
>gb| BC071512.1 | Danio rerio malate dehydrogenase 1b, NAD (soluble), mRNA (cDNA
clone MGC:86883 IMAGE:6904389), complete cds
Length = 1604
Score = 65.9 bits (33), Expect = 1e-07
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 459 gcactggagagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatg 518
||||||||||| ||||| |||||||||| |||||| ||||||||||| || || | ||||
Sbjct: 763 gcactggagagtttcctggctttgatgactgcagcaccacgctgctgcaccgtagaaatg 704
Query: 519 aactccccattcagcca 535
|| || || ||||||||
Sbjct: 703 aattctcccttcagcca 687
>gb| BC050508.1 | Danio rerio malate dehydrogenase 1b, NAD (soluble), mRNA (cDNA
clone MGC:56234 IMAGE:5601379), complete cds
Length = 1751
Score = 65.9 bits (33), Expect = 1e-07
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 459 gcactggagagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatg 518
||||||||||| ||||| |||||||||| |||||| ||||||||||| || || | ||||
Sbjct: 862 gcactggagagtttcctggctttgatgactgcagcaccacgctgctgcaccgtagaaatg 803
Query: 519 aactccccattcagcca 535
|| || || ||||||||
Sbjct: 802 aattctcccttcagcca 786
>gb| AC182655.2 | Populus trichocarpa clone Pop1-121O5, complete sequence
Length = 87839
Score = 61.9 bits (31), Expect = 2e-06
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 397 cctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagaga 456
||||||| ||||| |||||||| ||| | ||||| |||||||| ||||| |||||||| |
Sbjct: 7176 cctcaggagttccaagaacccaatcatgaatgtggtcacaagcagagctagcagcagata 7235
Query: 457 gagcactggagagcttcctcgctttgatgattgcagcgccacg 499
||||| || ||||| | ||||| ||||||||||| |||||
Sbjct: 7236 atgcacttgaaagctttcgtgctttaatgattgcagcaccacg 7278
>emb| CR352220.19 | Zebrafish DNA sequence from clone DKEY-148F10 in linkage group 17,
complete sequence
Length = 174580
Score = 61.9 bits (31), Expect = 2e-06
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 459 gcactggagagcttcctcgctttgatgattgcagcgccacgctgctg 505
||||||||||| ||||| |||||||||| |||||| |||||||||||
Sbjct: 1357 gcactggagagtttcctggctttgatgactgcagcaccacgctgctg 1311
>ref| XM_681988.1 | PREDICTED: Danio rerio similar to cytosolic malate dehydrogenase B
(LOC572887), mRNA
Length = 1558
Score = 58.0 bits (29), Expect = 3e-05
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 459 gcactggagagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatg 518
||||||||||| ||||| |||||||||| |||||| || |||||||| || || | ||||
Sbjct: 738 gcactggagagtttcctggctttgatgactgcagcacctcgctgctgcaccgtagaaatg 679
Query: 519 aactccccattcagcca 535
|| || || ||||||||
Sbjct: 678 aattctcccttcagcca 662
>gb| AF020272.1 |AF020272 Medicago sativa cytosolic malate dehydrogenase (cmdh) mRNA, complete
cds
Length = 1397
Score = 58.0 bits (29), Expect = 3e-05
Identities = 227/293 (77%)
Strand = Plus / Minus
Query: 249 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 308
|||| ||||||||| |||||||||||||| | || |||||||| ||| |||| ||||||
Sbjct: 1002 tccaacttcttccttgagaactcatcaattgaaagtccttgaactattttccattcacca 943
Query: 309 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 368
| || || || ||||| || ||||| | |||| || ||| ||| ||||||||
Sbjct: 942 ttggcacaggtgacagggaatgaatagatcaatccagatggtacattgtaggaaccatca 883
Query: 369 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 428
|| || || ||||| ||||| || || |||| || ||||| |||||||| || || |||
Sbjct: 882 gaatacactcccattgaaacgaaggtaccctggggagttccaagaacccaatcgcgaatg 823
Query: 429 tgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgatt 488
|| |||||||| | || |||||||| || ||||| || ||||| || || || || |||
Sbjct: 822 tggtcacaagcagcactagcagcagatagtgcacttgaaagctttctagccttaataatt 763
Query: 489 gcagcgccacgctgctggacagtggcaatgaactccccattcagccattcatc 541
||||| ||||| || || ||||||| |||||| || ||||||| |||| ||||
Sbjct: 762 gcagcaccacgttgttgaacagtggaaatgaattctccattcaaccatgcatc 710
>emb| AL929560.14 | Zebrafish DNA sequence from clone CH211-241O15 in linkage group 17,
complete sequence
Length = 103820
Score = 54.0 bits (27), Expect = 5e-04
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 459 gcactggagagcttcctcgctttgatgattgcagcgccacgctgctg 505
||||||||||| ||||| |||||||||| |||||| || ||||||||
Sbjct: 85043 gcactggagagtttcctggctttgatgactgcagcacctcgctgctg 85089
>gb| AC121571.4 | Mus musculus BAC clone RP23-231J6 from 3, complete sequence
Length = 195006
Score = 48.1 bits (24), Expect = 0.032
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 141 gtttcttttattcaaaacatcaga 164
||||||||||||||||||||||||
Sbjct: 131186 gtttcttttattcaaaacatcaga 131163
>gb| CP000323.1 | Psychrobacter cryohalolentis K5, complete genome
Length = 3059876
Score = 46.1 bits (23), Expect = 0.12
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 477 gctttgatgattgcagcgccacg 499
|||||||||||||||||||||||
Sbjct: 2511228 gctttgatgattgcagcgccacg 2511250
>gb| DQ004558.1 | Oreochromis mossambicus malate dehydrogenase A (MdhA) mRNA, partial
cds
Length = 457
Score = 46.1 bits (23), Expect = 0.12
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 459 gcactggagagcttcctcgctttgatgattgcagcgccacgctgctg 505
|||||||| |||||||| || ||||||| ||||| |||||||||||
Sbjct: 224 gcactggacagcttcctggccttgatgacagcagcaccacgctgctg 178
>emb| CR675000.2 |CNS0FJSU Tetraodon nigroviridis full-length cDNA
Length = 1072
Score = 44.1 bits (22), Expect = 0.49
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 462 ctggagagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaac 521
||||| ||||||||||| ||||||| || || || | |||||||||||||| ||||||
Sbjct: 528 ctggacagcttcctcgccttgatgaccgctgcacctctctgctggacagtggtgatgaac 469
Query: 522 tc 523
||
Sbjct: 468 tc 467
>gb| AC140228.3 | Mus musculus BAC clone RP24-488C4 from 10, complete sequence
Length = 137705
Score = 44.1 bits (22), Expect = 0.49
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 445 tggcagcagagagagcactgga 466
||||||||||||||||||||||
Sbjct: 67991 tggcagcagagagagcactgga 67970
>gb| L41699.1 |PS300585E Eucalyptus globulus bicostata symbiont (F00064) mRNA, ESTun585
Length = 194
Score = 44.1 bits (22), Expect = 0.49
Identities = 106/134 (79%)
Strand = Plus / Minus
Query: 426 atgtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatg 485
||||| |||||||| | ||||||||||| || ||||| || |||||||| ||||| |
Sbjct: 194 atgtggtcacaagcagcactggcagcagaaagtgcacttgaaagcttcctagctttatta 135
Query: 486 attgcagcgccacgctgctggacagtggcaatgaactccccattcagccattcatcatct 545
|| ||| ||||||| || ||||| || | |||||| || || || | |||| |||||||
Sbjct: 134 atggcaacgccacgttgttggaccgtagaaatgaattctccgttgaaccatgcatcatcc 75
Query: 546 tgaacaagttcacg 559
| |||||||||||
Sbjct: 74 ttgacaagttcacg 61
>gb| AE017349.1 | Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
sequence
Length = 1178688
Score = 42.1 bits (21), Expect = 1.9
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 432 tcacaagctgagctggcagca 452
|||||||||||||||||||||
Sbjct: 593932 tcacaagctgagctggcagca 593952
>gb| BC059124.1 | Rattus norvegicus malate dehydrogenase 1, NAD (soluble), mRNA (cDNA
clone MGC:72755 IMAGE:6921518), complete cds
Length = 1312
Score = 42.1 bits (21), Expect = 1.9
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 459 gcactggagagcttcctcgctttgatgattgcagcgccacgctgctggacagt 511
|||||||| ||||||| || ||||||| ||||| ||||||||||| |||||
Sbjct: 807 gcactggacagcttccgagccttgatgacagcagcaccacgctgctgcacagt 755
>gb| AC112682.12 | Mus musculus chromosome 6, clone RP23-332K10, complete sequence
Length = 206903
Score = 42.1 bits (21), Expect = 1.9
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 160 tcagagcatcaactgctcttc 180
|||||||||||||||||||||
Sbjct: 126558 tcagagcatcaactgctcttc 126538
>emb| AM039952.1 | Xanthomonas campestris pv. vesicatoria complete genome
Length = 5178466
Score = 42.1 bits (21), Expect = 1.9
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 490 cagcgccacgctgctggacag 510
|||||||||||||||||||||
Sbjct: 3060467 cagcgccacgctgctggacag 3060447
>emb| CR954247.1 | Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete
sequence
Length = 635328
Score = 42.1 bits (21), Expect = 1.9
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 189 atttactcaaggcatgagtaa 209
|||||||||||||||||||||
Sbjct: 505077 atttactcaaggcatgagtaa 505057
>ref| XM_572644.1 | Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
(CNI02140) partial mRNA
Length = 6132
Score = 42.1 bits (21), Expect = 1.9
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 432 tcacaagctgagctggcagca 452
|||||||||||||||||||||
Sbjct: 3427 tcacaagctgagctggcagca 3447
>emb| AJ250843.1 |MSQ250843 Mantoniella squamata mRNA for cytosolic malate dehydrogenase
(nad-MDH gene)
Length = 1077
Score = 42.1 bits (21), Expect = 1.9
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 482 gatgattgcagcgccacgctgctggacagtggcaatgaactcccc 526
|||||| || ||||| |||||||| || ||||| |||||||||||
Sbjct: 702 gatgatggcggcgccgcgctgctgcacggtggcgatgaactcccc 658
>ref| NM_033235.1 | Rattus norvegicus malate dehydrogenase 1, NAD (soluble) (Mdh1),
mRNA
Length = 1266
Score = 42.1 bits (21), Expect = 1.9
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 459 gcactggagagcttcctcgctttgatgattgcagcgccacgctgctggacagt 511
|||||||| ||||||| || ||||||| ||||| ||||||||||| |||||
Sbjct: 766 gcactggacagcttccgagccttgatgacagcagcaccacgctgctgcacagt 714
>gb| AF093773.1 |AF093773 Rattus norvegicus cytosolic malate dehydrogenase (Mdh) mRNA,
complete cds
Length = 1266
Score = 42.1 bits (21), Expect = 1.9
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 459 gcactggagagcttcctcgctttgatgattgcagcgccacgctgctggacagt 511
|||||||| ||||||| || ||||||| ||||| ||||||||||| |||||
Sbjct: 766 gcactggacagcttccgagccttgatgacagcagcaccacgctgctgcacagt 714
>ref| XM_636241.1 | Dictyostelium discoideum malate dehydrogenase (DDB0230187), partial
mRNA
Length = 1002
Score = 40.1 bits (20), Expect = 7.7
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 321 actgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaacaccc 380
|||||||| || |||||||||| | || ||||| || |||||||| || |||||||||
Sbjct: 869 actgggaaagaaaagataagaccttctggaacaccataggaaccatcggaataaacaccc 810
Query: 381 atggaaac 388
|| |||||
Sbjct: 809 attgaaac 802
>ref| NM_005917.2 | Homo sapiens malate dehydrogenase 1, NAD (soluble) (MDH1), mRNA
Length = 1268
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 763 ttgatgacagcagcgccacgctgctgcacagt 732
>gb| AE008571.1 | Rickettsia conorii str. Malish 7, section 3 of 114 of the complete
genome
Length = 11078
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 388 caaatgttccctcaggggtt 407
||||||||||||||||||||
Sbjct: 1031 caaatgttccctcaggggtt 1012
>gb| BC001484.2 | Homo sapiens malate dehydrogenase 1, NAD (soluble), mRNA (cDNA
clone MGC:1375 IMAGE:3505345), complete cds
Length = 1286
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 763 ttgatgacagcagcgccacgctgctgcacagt 732
>gb| BC053105.1 | Mus musculus phosphorylase kinase beta, mRNA (cDNA clone MGC:62514
IMAGE:6409425), complete cds
Length = 4640
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 139 aggtttcttttattcaaaac 158
||||||||||||||||||||
Sbjct: 728 aggtttcttttattcaaaac 747
>ref| NM_199446.1 | Mus musculus phosphorylase kinase beta (Phkb), mRNA
Length = 4640
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 139 aggtttcttttattcaaaac 158
||||||||||||||||||||
Sbjct: 728 aggtttcttttattcaaaac 747
>gb| BC068420.1 | Danio rerio wu:fj56a04, mRNA (cDNA clone IMAGE:6970634), partial cds
Length = 3309
Score = 40.1 bits (20), Expect = 7.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 214 gcgccttctcctccgacagctcct 237
|||||||||||||||||| |||||
Sbjct: 2876 gcgccttctcctccgacacctcct 2899
>gb| AC125117.4 | Mus musculus BAC clone RP24-261P10 from chromosome 14, complete
sequence
Length = 165313
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 52 aagcctcatacacactgaaa 71
||||||||||||||||||||
Sbjct: 2432 aagcctcatacacactgaaa 2413
>gb| AC122830.4 | Mus musculus BAC clone RP23-224I23 from 8, complete sequence
Length = 257003
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 139 aggtttcttttattcaaaac 158
||||||||||||||||||||
Sbjct: 123832 aggtttcttttattcaaaac 123851
>gb| AC117185.2 | Mus musculus BAC clone RP23-37M7 from 8, complete sequence
Length = 188791
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 139 aggtttcttttattcaaaac 158
||||||||||||||||||||
Sbjct: 164232 aggtttcttttattcaaaac 164251
>gb| AC122858.2 | Mus musculus BAC clone RP23-126F14 from 14, complete sequence
Length = 189217
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 aagcctcatacacactgaaa 71
||||||||||||||||||||
Sbjct: 17464 aagcctcatacacactgaaa 17483
>emb| AL445195.4 | Human DNA sequence from clone RP11-427O13 on chromosome 13 Contains 2
NADH dehydrogenase pseudogenes and a novel gene, complete
sequence
Length = 172064
Score = 40.1 bits (20), Expect = 7.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 139 aggtttcttttattcaaaacatca 162
|||||||||||||| |||||||||
Sbjct: 166793 aggtttcttttattaaaaacatca 166816
>gb| AC079243.7 | Mus musculus strain C57BL6/J chromosome 6 clone RP23-64M7, complete
sequence
Length = 205508
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 gtgcagctgttctgggtgga 119
||||||||||||||||||||
Sbjct: 41094 gtgcagctgttctgggtgga 41113
>gb| AC055713.29 | Homo sapiens 12 BAC RP11-486O12 (Roswell Park Cancer Institute Human
BAC Library) complete sequence
Length = 118312
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 388 caaatgttccctcaggggtt 407
||||||||||||||||||||
Sbjct: 2673 caaatgttccctcaggggtt 2654
>emb| AL023592.1 |SPCC550 S.pombe chromosome III cosmid c550
Length = 38475
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 543 tcttgaacaagttcacgaac 562
||||||||||||||||||||
Sbjct: 8815 tcttgaacaagttcacgaac 8796
>emb| BX641152.1 |HSM807171 Homo sapiens mRNA; cDNA DKFZp686I13109 (from clone DKFZp686I13109)
Length = 8703
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 442 agctggcagcagagagagca 461
||||||||||||||||||||
Sbjct: 3713 agctggcagcagagagagca 3694
>gb| AC114399.2 | Homo sapiens chromosome 3 clone RP11-1019A2, complete sequence
Length = 180948
Score = 40.1 bits (20), Expect = 7.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 437 agctgagctggcagcagagagagc 460
||||||||||| ||||||||||||
Sbjct: 93237 agctgagctgggagcagagagagc 93214
>dbj| AK131442.1 | Homo sapiens cDNA FLJ16577 fis, clone TESTI2026647, weakly similar
to PROBABLE ATP-DEPENDENT RNA HELICASE DDX10
Length = 1848
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 388 caaatgttccctcaggggtt 407
||||||||||||||||||||
Sbjct: 8 caaatgttccctcaggggtt 27
>emb| CR622929.1 | full-length cDNA clone CS0DC020YF01 of Neuroblastoma Cot
25-normalized of Homo sapiens (human)
Length = 1225
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 781 ttgatgacagcagcgccacgctgctgcacagt 750
>emb| CR619426.1 | full-length cDNA clone CS0DI002YM05 of Placenta Cot 25-normalized
of Homo sapiens (human)
Length = 717
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 209 ttgatgacagcagcgccacgctgctgcacagt 178
>emb| CR609240.1 | full-length cDNA clone CS0DC013YO22 of Neuroblastoma Cot
25-normalized of Homo sapiens (human)
Length = 1257
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 774 ttgatgacagcagcgccacgctgctgcacagt 743
>emb| CR606360.1 | full-length cDNA clone CS0DJ015YM22 of T cells (Jurkat cell line)
Cot 10-normalized of Homo sapiens (human)
Length = 1256
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 781 ttgatgacagcagcgccacgctgctgcacagt 750
>emb| CR603513.1 | full-length cDNA clone CS0DC017YG07 of Neuroblastoma Cot
25-normalized of Homo sapiens (human)
Length = 1233
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 756 ttgatgacagcagcgccacgctgctgcacagt 725
>emb| CR598586.1 | full-length cDNA clone CS0DJ013YB20 of T cells (Jurkat cell line)
Cot 10-normalized of Homo sapiens (human)
Length = 1258
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 781 ttgatgacagcagcgccacgctgctgcacagt 750
>emb| CR594032.1 | full-length cDNA clone CS0DB003YN14 of Neuroblastoma Cot
10-normalized of Homo sapiens (human)
Length = 1231
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 756 ttgatgacagcagcgccacgctgctgcacagt 725
>gb| AC157099.5 | Mus musculus 6 BAC RP24-467O4 (Roswell Park Cancer Institute (C57BL/6J
Male) Mouse BAC Library) complete sequence
Length = 173237
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 384 gaaacaaatgttccctcagg 403
||||||||||||||||||||
Sbjct: 63391 gaaacaaatgttccctcagg 63410
>gb| AC104663.3 | Homo sapiens BAC clone RP11-713M6 from 4, complete sequence
Length = 137625
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 521 ctccccattcagccattcat 540
||||||||||||||||||||
Sbjct: 55014 ctccccattcagccattcat 54995
>gb| AC092445.4 | Homo sapiens BAC clone RP11-676H8 from 4, complete sequence
Length = 173840
Score = 40.1 bits (20), Expect = 7.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 138 aaggtttcttttattcaaaacatc 161
||||||||||||||| ||||||||
Sbjct: 120506 aaggtttcttttattgaaaacatc 120483
>dbj| AK165815.1 | Mus musculus 13 days embryo brain cDNA, RIKEN full-length enriched
library, clone:G630093B19 product:phosphorylase kinase
beta, full insert sequence
Length = 1015
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 139 aggtttcttttattcaaaac 158
||||||||||||||||||||
Sbjct: 723 aggtttcttttattcaaaac 742
>emb| CR457405.1 | Homo sapiens full open reading frame cDNA clone RZPDo834A0714D for
gene MDH1, malate dehydrogenase 1, NAD (soluble);
complete cds, incl. stopcodon
Length = 1005
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 707 ttgatgacagcagcgccacgctgctgcacagt 676
>ref| NM_001023088.1 | Schizosaccharomyces pombe 972h- hypothetical protein (SPCC550.05),
partial mRNA
Length = 612
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 543 tcttgaacaagttcacgaac 562
||||||||||||||||||||
Sbjct: 113 tcttgaacaagttcacgaac 94
>dbj| AK089493.1 | Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
full-length enriched library, clone:F730039M10
product:similar to phosphorylase kinase (EC 2.7.1.38)
beta chain [Homo sapiens], full insert sequence
Length = 1972
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 139 aggtttcttttattcaaaac 158
||||||||||||||||||||
Sbjct: 766 aggtttcttttattcaaaac 785
>dbj| AB208182.1 | Elephas maximus DNA, AfroSINE locus Ma158
Length = 518
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 456 agagcactggagagcttcct 475
||||||||||||||||||||
Sbjct: 113 agagcactggagagcttcct 132
>dbj| AB208181.1 | Loxodonta africana DNA, AfroSINE locus Ma158
Length = 518
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 456 agagcactggagagcttcct 475
||||||||||||||||||||
Sbjct: 113 agagcactggagagcttcct 132
>gb| AC048340.24 | Homo sapiens 12 BAC RP11-469A24 (Roswell Park Cancer Institute Human
BAC Library) complete sequence
Length = 76354
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 388 caaatgttccctcaggggtt 407
||||||||||||||||||||
Sbjct: 8342 caaatgttccctcaggggtt 8323
>gb| AC159712.7 | Mus musculus BAC RP23-236J3 (Roswell Park Cancer Institute (C57BL/6J
Female) Mouse BAC Library) complete sequence
Length = 221910
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 384 gaaacaaatgttccctcagg 403
||||||||||||||||||||
Sbjct: 10006 gaaacaaatgttccctcagg 9987
>dbj| D55654.1 |HUMCMD Homo sapiens mRNA for cytosolic malate dehydrogenase, complete cds
Length = 1267
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 762 ttgatgacagcagcgccacgctgctgcacagt 731
>gb| AC016734.7 | Homo sapiens BAC clone RP11-391A7 from 2, complete sequence
Length = 218836
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 142235 ttgatgacagcagcgccacgctgctgcacagt 142204
>gb| AC063926.36 | Homo sapiens 12 BAC RP11-117L5 (Roswell Park Cancer Institute Human BAC
Library) complete sequence
Length = 192774
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 442 agctggcagcagagagagca 461
||||||||||||||||||||
Sbjct: 157456 agctggcagcagagagagca 157437
>emb| AL928704.10 | Mouse DNA sequence from clone RP23-393G10 on chromosome 2, complete
sequence
Length = 171715
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 548 aacaagttcacgaacaggct 567
||||||||||||||||||||
Sbjct: 152481 aacaagttcacgaacaggct 152500
>gb| AC158188.2 | Selaginella moellendorffii clone JGIASXY-5I4, complete sequence
Length = 37581
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 244 tcgcatccatcttcttcctc 263
||||||||||||||||||||
Sbjct: 6104 tcgcatccatcttcttcctc 6123
>dbj| AB115700.1 | Cryptococcus diffluens DNA, intergenic spacer 1 region
Length = 603
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 301 aatcaccaccgctgcacgtt 320
||||||||||||||||||||
Sbjct: 461 aatcaccaccgctgcacgtt 442
>gb| AY725475.1 | Lycopersicon esculentum cytosolic malate dehydrogenase (cMDH) mRNA,
complete cds
Length = 1005
Score = 40.1 bits (20), Expect = 7.7
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 411 agaacccagtcacggatgtgatcacaagctgagctggcagcaga 454
|||||||| ||| | || ||||||||||||||||| || |||||
Sbjct: 785 agaacccaatcatgtatatgatcacaagctgagctagctgcaga 742
>gb| AF075269.1 |AF075269 Simian immunodeficiency virus strain SIVlhoest, complete genome
Length = 9957
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 449 agcagagagagcactggaga 468
||||||||||||||||||||
Sbjct: 2500 agcagagagagcactggaga 2519
>dbj| AP004609.1 | Homo sapiens genomic DNA, chromosome 11q, clone:RP11-158I9, complete
sequence
Length = 195409
Score = 40.1 bits (20), Expect = 7.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 450 gcagagagagcactggagagcttc 473
|||||||||| |||||||||||||
Sbjct: 130816 gcagagagaggactggagagcttc 130793
>dbj| AP003392.2 | Homo sapiens genomic DNA, chromosome 11 clone:RP11-110I1, complete
sequence
Length = 178341
Score = 40.1 bits (20), Expect = 7.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 450 gcagagagagcactggagagcttc 473
|||||||||| |||||||||||||
Sbjct: 4878 gcagagagaggactggagagcttc 4855
>gb| U20352.1 |HSU20352 Homo sapiens malate dehydrogenase (MDHA) mRNA, complete cds
Length = 1213
Score = 40.1 bits (20), Expect = 7.7
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 480 ttgatgattgcagcgccacgctgctggacagt 511
||||||| ||||||||||||||||| |||||
Sbjct: 707 ttgatgacagcagcgccacgctgctgcacagt 676
>gb| M74695.1 |HIVGP120K Human immunodeficiency virus type 1 env gene, partial cds (a11)
Length = 396
Score = 40.1 bits (20), Expect = 7.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 148 ttattcaaaacatcagagca 167
||||||||||||||||||||
Sbjct: 206 ttattcaaaacatcagagca 187
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,089,104
Number of Sequences: 3902068
Number of extensions: 5089104
Number of successful extensions: 142099
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141723
Number of HSP's gapped (non-prelim): 336
length of query: 567
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 544
effective length of database: 17,143,297,704
effective search space: 9325953950976
effective search space used: 9325953950976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)