ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63e17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, compl... 728 0.0
2ref|NM_192260.1| Oryza sativa (japonica cultivar-group), predic... 125 1e-25
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
4dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
5dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
6dbj|AK099825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
7dbj|AK060890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
8gb|AF182806.1|AF182806 Oryza sativa carbonic anhydrase 3 mRNA, c... 125 1e-25
9gb|U08404.1|OSU08404 Oryza sativa chloroplast carbonic anhydrase... 125 1e-25
10dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, comple... 125 1e-25
11gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mR... 98 3e-17
12gb|AY109272.1| Zea mays PCO064414 mRNA sequence 92 2e-15
13gb|U19739.1|UPU19739 Urochloa panicoides carbonic anhydrase 2 mR... 90 7e-15
14gb|AY109373.1| Zea mays CL2331_1 mRNA sequence 70 6e-09
15gb|U08403.1|ZMU08403 Zea mays Golden Bantam carbonic anhydrase m... 70 6e-09
16gb|U08401.1|ZMU08401 Zea mays carbonic anhydrase mRNA, complete cds 70 6e-09
17gb|M95073.1|MZEORFN Zea mays putative carbonic anhydrase homolog... 70 6e-09
18emb|AL929442.9| Mouse DNA sequence from clone RP23-95M20 on chro... 42 1.4
19gb|AF140060.1|BNFADD1 Brassica napus FAD31 gene, FAD31-DN allele... 42 1.4
20gb|AF056572.1| Brassica rapa cultivar R500 FAD31 gene, FAD31-R50... 42 1.4
21dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.4
22ref|XM_467687.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
23ref|NM_196639.1| Oryza sativa (japonica cultivar-group) hypothet... 40 5.4
24gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6... 40 5.4
25emb|Z99297.1|HS262D12 Human DNA sequence from clone RP1-262D12 o... 40 5.4
26emb|AL161799.19| Human DNA sequence from clone RP11-177H22 on ch... 40 5.4
27emb|AL079341.19|HSDJ319M7 Human DNA sequence from clone RP1-319M... 40 5.4
28emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete... 40 5.4
29emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome 40 5.4
30emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, comple... 40 5.4
31emb|CR628406.8| Zebrafish DNA sequence from clone CH211-146A2 in... 40 5.4
32gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
33gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell ... 40 5.4
34gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell ... 40 5.4
35gb|AC021856.7| Homo sapiens BAC clone RP11-553E5 from 4, complet... 40 5.4
36gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-8... 40 5.4
37gb|U70770.1|DMU70770 Drosophila melanogaster furrowed (fw) gene,... 40 5.4
38dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
39dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
41gb|AC012170.6|AC012170 Homo sapiens chromosome 15 clone RP11-562... 40 5.4
42gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, compl... 40 5.4
43gb|AC113431.2| Homo sapiens chromosome 5 clone RP11-90F2, comple... 40 5.4
44dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 5.4
45dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
46dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
47dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
48dbj|AK108113.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
49emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.4
50gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 ... 40 5.4
51gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
52dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, comp... 40 5.4
53emb|AL713980.9| Human DNA sequence from clone XXbac-81I18 on chr... 40 5.4 
>gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds
          Length = 1529

 Score =  728 bits (367), Expect = 0.0
 Identities = 390/399 (97%), Gaps = 1/399 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    tgaaaatattatattaaacttatatatgatgtctttcgatn-caagacgatcaaattatg 67
            ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 1485 tgaaaatattatattaaacttatatatgatgtctttcgatcacaagacgatcaaattatg 1426

                                                                        
Query: 68   catcacatagcagtacaattcctcgtcagaaaatggtgaagnnnnnnnggttctattgct 127
            |||||||||||||||||||||||||||||||||||||||||       ||||||||||||
Sbjct: 1425 catcacatagcagtacaattcctcgtcagaaaatggtgaagaaaaaaaggttctattgct 1366

                                                                        
Query: 128  tatggcaaattcacatcgggccatccggcatccagtactggacaataacgggtacgcact 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1365 tatggcaaattcacatcgggccatccggcatccagtactggacaataacgggtacgcact 1306

                                                                        
Query: 188  cccatggcattgcattcacatcgatcggacgatatcttgatatatgtacgtttgtatatg 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1305 cccatggcattgcattcacatcgatcggacgatatcttgatatatgtacgtttgtatatg 1246

                                                                        
Query: 248  tcggagttaaccggtggggaagatttactgctcccatgtttcgaacttgccggagacgaa 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1245 tcggagttaaccggtggggaagatttactgctcccatgtttcgaacttgccggagacgaa 1186

                                                                        
Query: 308  gtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttgacgaacgg 367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 gtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttgacgaacgg 1126

                                                   
Query: 368  gtaggtcaagaggttctggagggacacgttgacggcctc 406
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 gtaggtcaagaggttctggagggacacgttgacggcctc 1087
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>ref|NM_192260.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 819

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                       
Query: 294 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 353
           |||||||||||||||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 797 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 738

                                          
Query: 354 tccttgacgaacgggtaggtcaagaggttct 384
           |||||||||||||||||||||  ||||||||
Sbjct: 737 tccttgacgaacgggtaggtcttgaggttct 707
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                            
Query: 294      ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 353
                |||||||||||||||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 25698466 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 25698407

                                               
Query: 354      tccttgacgaacgggtaggtcaagaggttct 384
                |||||||||||||||||||||  ||||||||
Sbjct: 25698406 tccttgacgaacgggtaggtcttgaggttct 25698376
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>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0004A09
          Length = 158826

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                          
Query: 294    ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 353
              |||||||||||||||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 145272 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 145213

                                             
Query: 354    tccttgacgaacgggtaggtcaagaggttct 384
              |||||||||||||||||||||  ||||||||
Sbjct: 145212 tccttgacgaacgggtaggtcttgaggttct 145182
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>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           PAC clone:P0039G05
          Length = 138429

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                       
Query: 294 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 353
           |||||||||||||||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 930 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 871

                                          
Query: 354 tccttgacgaacgggtaggtcaagaggttct 384
           |||||||||||||||||||||  ||||||||
Sbjct: 870 tccttgacgaacgggtaggtcttgaggttct 840
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>dbj|AK099825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102G17, full
           insert sequence
          Length = 1163

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                       
Query: 294 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 353
           |||||||||||||||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 847 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 788

                                          
Query: 354 tccttgacgaacgggtaggtcaagaggttct 384
           |||||||||||||||||||||  ||||||||
Sbjct: 787 tccttgacgaacgggtaggtcttgaggttct 757
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>dbj|AK060890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B12, full
           insert sequence
          Length = 1165

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                       
Query: 294 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 353
           |||||||||||||||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 846 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 787

                                          
Query: 354 tccttgacgaacgggtaggtcaagaggttct 384
           |||||||||||||||||||||  ||||||||
Sbjct: 786 tccttgacgaacgggtaggtcttgaggttct 756
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>gb|AF182806.1|AF182806 Oryza sativa carbonic anhydrase 3 mRNA, complete cds
          Length = 1169

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                       
Query: 294 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 353
           |||||||||||||||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 841 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 782

                                          
Query: 354 tccttgacgaacgggtaggtcaagaggttct 384
           |||||||||||||||||||||  ||||||||
Sbjct: 781 tccttgacgaacgggtaggtcttgaggttct 751
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>gb|U08404.1|OSU08404 Oryza sativa chloroplast carbonic anhydrase mRNA, complete cds
          Length = 1148

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                       
Query: 294 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 353
           |||||||||||||||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 832 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 773

                                          
Query: 354 tccttgacgaacgggtaggtcaagaggttct 384
           |||||||||||||||||||||  ||||||||
Sbjct: 772 tccttgacgaacgggtaggtcttgaggttct 742
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>dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, complete cds
          Length = 8532

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                        
Query: 294  ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 353
            |||||||||||||||||||||||||||||||||||||||||||| |||||||  |  |||
Sbjct: 8047 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 7988

                                           
Query: 354  tccttgacgaacgggtaggtcaagaggttct 384
            |||||||||||||||||||||  ||||||||
Sbjct: 7987 tccttgacgaacgggtaggtcttgaggttct 7957
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>gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mRNA, complete cds
          Length = 1208

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 91/105 (86%)
 Strand = Plus / Minus

                                                                       
Query: 302 gacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttgac 361
           |||||||||||||||||||||||| ||||||||||  ||||||| |||||| ||||| ||
Sbjct: 864 gacgaagtcgtagtggccgccgaccagcttgagggagccgttggacacaccttccttcac 805

                                                        
Query: 362 gaacgggtaggtcaagaggttctggagggacacgttgacggcctc 406
             | |||||||||| |||||| |  ||||| ||||||||||||||
Sbjct: 804 ccaggggtaggtcaggaggttgtacagggagacgttgacggcctc 760
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>gb|AY109272.1| Zea mays PCO064414 mRNA sequence
          Length = 978

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                       
Query: 297 ccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctcc 356
           ||||| ||||||||||||||| ||||||| ||||||||||| || |||| ||  || |||
Sbjct: 719 ccggacacgaagtcgtagtgggcgccgaccagcttgagggtccccttggccagcccttcc 660

                                                             
Query: 357 ttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctc 406
           | |||||| |||||||||  ||||||||  ||||||||||| ||||||||
Sbjct: 659 tggacgaaggggtaggtcttgaggttctccagggacacgttcacggcctc 610
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>gb|U19739.1|UPU19739 Urochloa panicoides carbonic anhydrase 2 mRNA, complete cds
          Length = 1034

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                       
Query: 302 gacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttgac 361
           |||||||||||||||||||||||| ||||||||||  ||||||| ||| || ||||| ||
Sbjct: 703 gacgaagtcgtagtggccgccgaccagcttgagggacccgttggacacgccttccttcac 644

                                                        
Query: 362 gaacgggtaggtcaagaggttctggagggacacgttgacggcctc 406
             | |||||||||| |||||| | |||||| |||||||| |||||
Sbjct: 643 ccaggggtaggtcaggaggttgtagagggagacgttgactgcctc 599
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>gb|AY109373.1| Zea mays CL2331_1 mRNA sequence
          Length = 2552

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                        
Query: 300  gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 359
            ||||| |||||||||||| ||||||  ||||||||||| || || |  |  || ||||||
Sbjct: 1610 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1551

                                                           
Query: 360  acgaacgggtaggtcaagaggttctggagggacacgttgacggcctc 406
            ||||| |||||||||  ||||||||  ||||||||||| ||||||||
Sbjct: 1550 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctc 1504
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>gb|U08403.1|ZMU08403 Zea mays Golden Bantam carbonic anhydrase mRNA, complete cds
          Length = 2184

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                        
Query: 300  gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 359
            ||||| |||||||||||| ||||||  ||||||||||| || || |  |  || ||||||
Sbjct: 1934 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1875

                                                           
Query: 360  acgaacgggtaggtcaagaggttctggagggacacgttgacggcctc 406
            ||||| |||||||||  ||||||||  ||||||||||| ||||||||
Sbjct: 1874 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctc 1828



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 354 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctc 406
           ||||||||||| |||||| ||  |||||||||||| |||||||| ||||||||
Sbjct: 671 tccttgacgaaggggtagctcttgaggttctggagcgacacgttcacggcctc 619



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 354  tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctc 406
            |||||||| || |||||| ||  |||||||||||| |||||||| ||||||||
Sbjct: 1277 tccttgaccaaggggtagctcttgaggttctggagcgacacgttcacggcctc 1225
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>gb|U08401.1|ZMU08401 Zea mays carbonic anhydrase mRNA, complete cds
          Length = 1920

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                        
Query: 300  gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 359
            ||||| |||||||||||| ||||||  ||||||||||| || || |  |  || ||||||
Sbjct: 1610 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1551

                                                           
Query: 360  acgaacgggtaggtcaagaggttctggagggacacgttgacggcctc 406
            ||||| |||||||||  ||||||||  ||||||||||| ||||||||
Sbjct: 1550 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctc 1504



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 354 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctc 406
           ||||||||||| |||||| ||  |||||||||||| |||||||| ||||||||
Sbjct: 950 tccttgacgaaggggtagctcttgaggttctggagcgacacgttcacggcctc 898
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>gb|M95073.1|MZEORFN Zea mays putative carbonic anhydrase homolog mRNA, partial cds
          Length = 210

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                       
Query: 300 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 359
           ||||| |||||||||||| ||||||  ||||||||||| || || |  |  || ||||||
Sbjct: 171 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 112

                                                          
Query: 360 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctc 406
           ||||| |||||||||  ||||||||  ||||||||||| ||||||||
Sbjct: 111 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctc 65
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>emb|AL929442.9| Mouse DNA sequence from clone RP23-95M20 on chromosome 4, complete
              sequence
          Length = 176578

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 13     aatattatattaaacttatat 33
              |||||||||||||||||||||
Sbjct: 154336 aatattatattaaacttatat 154356
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>gb|AF140060.1|BNFADD1 Brassica napus FAD31 gene, FAD31-DN allele, partial sequence
          Length = 655

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  aaatattatattaaacttata 32
           |||||||||||||||||||||
Sbjct: 319 aaatattatattaaacttata 299
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>gb|AF056572.1| Brassica rapa cultivar R500 FAD31 gene, FAD31-R500 allele, partial
           cds
          Length = 1714

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  aaatattatattaaacttata 32
           |||||||||||||||||||||
Sbjct: 320 aaatattatattaaacttata 300
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>dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-212D19, complete
             sequence
          Length = 138197

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 228   tatatgtacgtttgtatatgt 248
             |||||||||||||||||||||
Sbjct: 80852 tatatgtacgtttgtatatgt 80872
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>ref|XM_467687.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1138

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 316 ggccgccgacgagcttgagg 335
           ||||||||||||||||||||
Sbjct: 102 ggccgccgacgagcttgagg 121
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>ref|NM_196639.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0019M20.11), mRNA
          Length = 642

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 316 ggccgccgacgagcttgagg 335
           ||||||||||||||||||||
Sbjct: 189 ggccgccgacgagcttgagg 208
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>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete
              sequence
          Length = 252420

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 225    tgatatatgtacgtttgtatatgt 248
              |||||||||||| |||||||||||
Sbjct: 127219 tgatatatgtacatttgtatatgt 127196
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>emb|Z99297.1|HS262D12 Human DNA sequence from clone RP1-262D12 on chromosome 1q23.3-24.3
             Contains the 5' end of the MRPS14 gene for mitochondrial
             ribosomal protein S14, a serologically defined colon
             cancer antigen 3 (SDCCAG3) pseudogene, the 5' end of the
             TNN gene for tenascin N and a CpG island, complete
             sequence
          Length = 100997

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    aaaatattatattaaactta 30
             ||||||||||||||||||||
Sbjct: 92573 aaaatattatattaaactta 92554
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>emb|AL161799.19| Human DNA sequence from clone RP11-177H22 on chromosome 10 Contains
             part of the MLLT10 gene for myeloid/lymphoid or
             mixed-lineage leukemia (trithorax homolog, Drosophila);
             translocated to, 10 (AF10) and a heterogeneous nuclear
             ribonucleoprotein R (HNRPR)(HNRNPR, hnRNP-R) pseudogene,
             complete sequence
          Length = 139996

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    ttatattaaacttatatatg 36
             ||||||||||||||||||||
Sbjct: 62570 ttatattaaacttatatatg 62551
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>emb|AL079341.19|HSDJ319M7 Human DNA sequence from clone RP1-319M7 on chromosome 6p21.1-21.3
             Contains the 5' end of the gene for a novel protein
             (contains KIAA1880 and FLJ32945), a TRK-fused gene (TFG)
             pseudogene and a CpG island, complete sequence
          Length = 128216

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   ttctattgcttatggcaaat 137
             ||||||||||||||||||||
Sbjct: 55862 ttctattgcttatggcaaat 55881
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>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome
          Length = 1512977

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 18      tatattaaacttatatatga 37
               ||||||||||||||||||||
Sbjct: 1425662 tatattaaacttatatatga 1425643
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>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome
          Length = 1499920

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 18      tatattaaacttatatatga 37
               ||||||||||||||||||||
Sbjct: 1412668 tatattaaacttatatatga 1412649
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>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome
          Length = 1516355

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 18      tatattaaacttatatatga 37
               ||||||||||||||||||||
Sbjct: 1447650 tatattaaacttatatatga 1447631
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>emb|CR628406.8| Zebrafish DNA sequence from clone CH211-146A2 in linkage group 11,
             complete sequence
          Length = 145678

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    aaatattatattaaacttatatat 35
             ||||||||||||||| ||||||||
Sbjct: 47396 aaatattatattaaaattatatat 47373
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>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20,
              complete sequence
          Length = 139421

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 316    ggccgccgacgagcttgagg 335
              ||||||||||||||||||||
Sbjct: 110220 ggccgccgacgagcttgagg 110239
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>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 179892

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 11     aaaatattatattaaacttatata 34
              ||||||||||||||||| ||||||
Sbjct: 159051 aaaatattatattaaacatatata 159074
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>gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 186714

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     aaaatattatattaaacttatata 34
              ||||||||||||||||| ||||||
Sbjct: 107876 aaaatattatattaaacatatata 107853
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>gb|AC021856.7| Homo sapiens BAC clone RP11-553E5 from 4, complete sequence
          Length = 202507

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 11     aaaatattatattaaacttatata 34
              ||||| ||||||||||||||||||
Sbjct: 128989 aaaatgttatattaaacttatata 129012
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>gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-85d15, complete
             sequence
          Length = 127331

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    aaaatattatattaaacttatata 34
             |||||||||||||||| |||||||
Sbjct: 31960 aaaatattatattaaatttatata 31983
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>gb|U70770.1|DMU70770 Drosophila melanogaster furrowed (fw) gene, complete cds
          Length = 13523

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 11   aaaatattatattaaacttatata 34
            ||||||||||||||||| ||||||
Sbjct: 9092 aaaatattatattaaacatatata 9069
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 316      ggccgccgacgagcttgagg 335
                ||||||||||||||||||||
Sbjct: 14930442 ggccgccgacgagcttgagg 14930461
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 316      ggccgccgacgagcttgagg 335
                ||||||||||||||||||||
Sbjct: 28350077 ggccgccgacgagcttgagg 28350096
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 316      ggccgccgacgagcttgagg 335
                ||||||||||||||||||||
Sbjct: 30832078 ggccgccgacgagcttgagg 30832097
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>gb|AC012170.6|AC012170 Homo sapiens chromosome 15 clone RP11-562A8 map 15q21.1, complete
             sequence
          Length = 198550

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    aaatattatattaaacttat 31
             ||||||||||||||||||||
Sbjct: 74413 aaatattatattaaacttat 74432
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>gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, complete sequence
          Length = 189466

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    atatatgtacgtttgtatat 246
              ||||||||||||||||||||
Sbjct: 169067 atatatgtacgtttgtatat 169048
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>gb|AC113431.2| Homo sapiens chromosome 5 clone RP11-90F2, complete sequence
          Length = 156789

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     aaaatattatattaaactta 30
              ||||||||||||||||||||
Sbjct: 126655 aaaatattatattaaactta 126636
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     aacttatatatgatgtcttt 44
              ||||||||||||||||||||
Sbjct: 320903 aacttatatatgatgtcttt 320922
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>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0661G04
          Length = 157292

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   ggccgccgacgagcttgagg 335
             ||||||||||||||||||||
Sbjct: 62655 ggccgccgacgagcttgagg 62674
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>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0623A10
          Length = 156517

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 316    ggccgccgacgagcttgagg 335
              ||||||||||||||||||||
Sbjct: 148106 ggccgccgacgagcttgagg 148125
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>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0684F11
          Length = 147731

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   ggccgccgacgagcttgagg 335
             ||||||||||||||||||||
Sbjct: 15655 ggccgccgacgagcttgagg 15674
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>dbj|AK108113.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-C02, full
           insert sequence
          Length = 1138

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 316 ggccgccgacgagcttgagg 335
           ||||||||||||||||||||
Sbjct: 102 ggccgccgacgagcttgagg 121
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   ggccgccgacgagcttgagg 335
             ||||||||||||||||||||
Sbjct: 59918 ggccgccgacgagcttgagg 59937
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>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete
              sequence
          Length = 308317

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 11     aaaatattatattaaacttatata 34
              ||||||||||||||||| ||||||
Sbjct: 286492 aaaatattatattaaacatatata 286515
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 316      ggccgccgacgagcttgagg 335
                ||||||||||||||||||||
Sbjct: 14938683 ggccgccgacgagcttgagg 14938702
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>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence
          Length = 949626

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 4      ggttntgaaaatattatattaaa 26
              |||| ||||||||||||||||||
Sbjct: 112840 ggttatgaaaatattatattaaa 112862
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>emb|AL713980.9| Human DNA sequence from clone XXbac-81I18 on chromosome 6, complete
             sequence
          Length = 123817

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    aaatattatattaaacttat 31
             ||||||||||||||||||||
Sbjct: 66991 aaatattatattaaacttat 67010


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,825,402
Number of Sequences: 3902068
Number of extensions: 2825402
Number of successful extensions: 53367
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53069
Number of HSP's gapped (non-prelim): 296
length of query: 406
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 384
effective length of database: 17,147,199,772
effective search space: 6584524712448
effective search space used: 6584524712448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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