Clone Name | rbah63f16 |
---|---|
Clone Library Name | barley_pub |
>gb|AC096730.3| Homo sapiens BAC clone RP11-66A14 from 4, complete sequence Length = 188921 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 243 caggttgatgtcaacttgtaaaggact 269 ||||||||| ||||||||||||||||| Sbjct: 3563 caggttgatatcaacttgtaaaggact 3537
>emb|BX901893.12| Zebrafish DNA sequence from clone CH211-72G23 in linkage group 1, complete sequence Length = 103132 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 cagcaacctaagctgtgaacaa 74 |||||||||||||||||||||| Sbjct: 21016 cagcaacctaagctgtgaacaa 20995
>emb|CR388015.14| Zebrafish DNA sequence from clone DKEY-246L21 in linkage group 24, complete sequence Length = 140648 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 tgaaatctcatgaattgtgtg 440 ||||||||||||||||||||| Sbjct: 88155 tgaaatctcatgaattgtgtg 88175
>emb|AL138919.12| Human DNA sequence from clone RP3-492L20 on chromosome 6, complete sequence Length = 72535 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tgatgtcaacttgtaaagga 267 |||||||||||||||||||| Sbjct: 58250 tgatgtcaacttgtaaagga 58269
>emb|AL021747.2|SPBC20F10 S.pombe chromosome II cosmid c20F10 Length = 23000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 atgtcaacttgtaaaggact 269 |||||||||||||||||||| Sbjct: 3190 atgtcaacttgtaaaggact 3171
>gb|AC100400.10| Mus musculus chromosome 15, clone RP23-134E16, complete sequence Length = 211743 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ggatcttcttgtgatgtcct 366 |||||||||||||||||||| Sbjct: 84804 ggatcttcttgtgatgtcct 84823
>emb|BX572637.17| Zebrafish DNA sequence from clone DKEY-17N16 in linkage group 11, complete sequence Length = 158265 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 tgaaatctcatgaattgtgt 439 |||||||||||||||||||| Sbjct: 12283 tgaaatctcatgaattgtgt 12264
>emb|BX072577.14| Zebrafish DNA sequence from clone CH211-151G22 in linkage group 21, complete sequence Length = 160341 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 tgaaatctcatgaattgtgt 439 |||||||||||||||||||| Sbjct: 157727 tgaaatctcatgaattgtgt 157708
>emb|BX248082.11| Zebrafish DNA sequence from clone CH211-237B12 in linkage group 16, complete sequence Length = 152455 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 tgaaatctcatgaattgtgt 439 |||||||||||||||||||| Sbjct: 142005 tgaaatctcatgaattgtgt 141986
>ref|NM_001022287.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC20F10.02c), partial mRNA Length = 1803 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 atgtcaacttgtaaaggact 269 |||||||||||||||||||| Sbjct: 399 atgtcaacttgtaaaggact 418
>emb|CT025748.16| Zebrafish DNA sequence from clone CH73-166N24 in linkage group 5, complete sequence Length = 117231 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 tgaaatctcatgaattgtgt 439 |||||||||||||||||||| Sbjct: 20292 tgaaatctcatgaattgtgt 20273 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,771,461 Number of Sequences: 3902068 Number of extensions: 2771461 Number of successful extensions: 44215 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44200 Number of HSP's gapped (non-prelim): 15 length of query: 446 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 424 effective length of database: 17,147,199,772 effective search space: 7270412703328 effective search space used: 7270412703328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)