ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63g09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_194623.1| Oryza sativa (japonica cultivar-group) putative o-methyltransferase ZRP4 (OSJNBa0023I19.21), mRNA Length = 1101 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||| ||||||||||| | Sbjct: 1052 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatactcctctcgctcg 993 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || ||||||||||||||||| ||||| ||||||| Sbjct: 992 atgccatcgatgtacatcatgaaaacatcaaacaaaa 956
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||| ||||||||||| | Sbjct: 1142320 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatactcctctcgctcg 1142379 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || ||||||||||||||||| ||||| ||||||| Sbjct: 1142380 atgccatcgatgtacatcatgaaaacatcaaacaaaa 1142416 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||||||||||||||| | Sbjct: 1119252 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctctcgctcg 1119311 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || || | |||||||||||| ||||| ||||||| Sbjct: 1119312 atgccatcaacgtacatcatgaaaacatcaaacaaaa 1119348
>gb|AC079179.5| Oryza sativa chromosome 10 clone OSJNBa0079B05, complete sequence Length = 145526 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||| ||||||||||| | Sbjct: 26558 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatactcctctcgctcg 26617 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || ||||||||||||||||| ||||| ||||||| Sbjct: 26618 atgccatcgatgtacatcatgaaaacatcaaacaaaa 26654 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||||||||||||||| | Sbjct: 3490 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctctcgctcg 3549 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || || | |||||||||||| ||||| ||||||| Sbjct: 3550 atgccatcaacgtacatcatgaaaacatcaaacaaaa 3586
>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence Length = 157450 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||| ||||||||||| | Sbjct: 139773 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatactcctctcgctcg 139832 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || ||||||||||||||||| ||||| ||||||| Sbjct: 139833 atgccatcgatgtacatcatgaaaacatcaaacaaaa 139869 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||||||||||||||| | Sbjct: 116705 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctctcgctcg 116764 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || || | |||||||||||| ||||| ||||||| Sbjct: 116765 atgccatcaacgtacatcatgaaaacatcaaacaaaa 116801
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||| ||||||||||| | Sbjct: 1142320 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatactcctctcgctcg 1142379 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || ||||||||||||||||| ||||| ||||||| Sbjct: 1142380 atgccatcgatgtacatcatgaaaacatcaaacaaaa 1142416 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||||||||||||||| | Sbjct: 1119252 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctctcgctcg 1119311 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || || | |||||||||||| ||||| ||||||| Sbjct: 1119312 atgccatcaacgtacatcatgaaaacatcaaacaaaa 1119348
>dbj|AK069308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K03, full insert sequence Length = 1483 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||| ||||||||||| | Sbjct: 1088 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatactcctctcgctcg 1029 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || ||||||||||||||||| ||||| ||||||| Sbjct: 1028 atgccatcgatgtacatcatgaaaacatcaaacaaaa 992
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||| ||||||||||| | Sbjct: 1142317 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatactcctctcgctcg 1142376 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || ||||||||||||||||| ||||| ||||||| Sbjct: 1142377 atgccatcgatgtacatcatgaaaacatcaaacaaaa 1142413 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||||||||||||||| | Sbjct: 1119249 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctctcgctcg 1119308 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || || | |||||||||||| ||||| ||||||| Sbjct: 1119309 atgccatcaacgtacatcatgaaaacatcaaacaaaa 1119345
>ref|NM_194620.1| Oryza sativa (japonica cultivar-group) putative o-methyltransferase ZRP4 (OSJNBa0023I19.18), mRNA Length = 1101 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||||||||||||||| | Sbjct: 1052 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctctcgctcg 993 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || || | |||||||||||| ||||| ||||||| Sbjct: 992 atgccatcaacgtacatcatgaaaacatcaaacaaaa 956
>dbj|AK069721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028O22, full insert sequence Length = 1269 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| || || ||||| ||||||||||||||| |||| |||||||||||||||| | Sbjct: 954 ttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctctcgctcg 895 Query: 190 atcccgtcgatgtacatcatgaagacatcgaacaaaa 226 || || || | |||||||||||| ||||| ||||||| Sbjct: 894 atgccatcaacgtacatcatgaaaacatcaaacaaaa 858
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| ||||| ||||| || |||||||||||| |||| ||||||||||| |||| | Sbjct: 10687876 ttgtagtcactaaatccagcctccaagaaaatcttcttccattcatgctcctcccgctcg 10687935 Query: 190 atcccgtcgatgtacatcatgaagacatc 218 || || ||| ||||||||||||| ||||| Sbjct: 10687936 atgccatcggtgtacatcatgaaaacatc 10687964
>dbj|AP005881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0057I13 Length = 156330 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| ||||| ||||| || |||||||||||| |||| ||||||||||| |||| | Sbjct: 140188 ttgtagtcactaaatccagcctccaagaaaatcttcttccattcatgctcctcccgctcg 140247 Query: 190 atcccgtcgatgtacatcatgaagacatc 218 || || ||| ||||||||||||| ||||| Sbjct: 140248 atgccatcggtgtacatcatgaaaacatc 140276
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| ||||| ||||| || |||||||||||| |||| ||||||||||| |||| | Sbjct: 24494 ttgtagtcactaaatccagcctccaagaaaatcttcttccattcatgctcctcccgctcg 24553 Query: 190 atcccgtcgatgtacatcatgaagacatc 218 || || ||| ||||||||||||| ||||| Sbjct: 24554 atgccatcggtgtacatcatgaaaacatc 24582
>dbj|AK072740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134H21, full insert sequence Length = 1466 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 130 ttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgctgg 189 |||||||| ||||| ||||| || |||||||||||| |||| ||||||||||| |||| | Sbjct: 1082 ttgtagtcactaaatccagcctccaagaaaatcttcttccattcatgctcctcccgctcg 1023 Query: 190 atcccgtcgatgtacatcatgaagacatc 218 || || ||| ||||||||||||| ||||| Sbjct: 1022 atgccatcggtgtacatcatgaaaacatc 994
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 125 taatcttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctc 184 ||||||||||||| |||||||||||||| | ||||| |||| ||||||| ||||| |||| Sbjct: 15021834 taatcttgtagtcactaaacccagcttcaaggaaaagcttcttccactcttgctcatctc 15021775 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 127 atcttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgc 186 ||||||||||| |||||||| ||||| | ||||| |||| ||||||| ||||| |||||| Sbjct: 15055696 atcttgtagtcactaaacccggcttcgacgaaaaccttcttccactcttgctcgtctcgc 15055637 Query: 187 t 187 | Sbjct: 15055636 t 15055636 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 274 accaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggctttcttg 333 ||||| |||||||||||||||||||| || || ||||| || | ||||||||||| ||| Sbjct: 14795079 accactatatccatgattatcacctttccaccggcgtctctagatgggatggcttttttg 14795138 Query: 334 cagt 337 |||| Sbjct: 14795139 cagt 14795142 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 271 ccaaccaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggctttc 330 |||||||| |||||||||||||||||||| ||||| ||| || | |||||||||||| Sbjct: 15021694 ccaaccactatatccatgattatcaccttttctcccttgtctctagttgggatggctttc 15021635 Query: 331 ttgcagt 337 || |||| Sbjct: 15021634 ttacagt 15021628 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 463 ggagctccggcgacgacacgagggaggtccagcacggtgca 503 ||||| ||||||||||| | |||||||||||||||||||| Sbjct: 15051238 ggagccccggcgacgacgtgggggaggtccagcacggtgca 15051198 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 406 gccggtgggatggactcgaacatgtcgccggggacg 441 |||||||||| | ||||||||||||||||| |||| Sbjct: 15051301 gccggtgggacgctctcgaacatgtcgccggcgacg 15051266
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 125 taatcttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctc 184 ||||||||||||| |||||||||||||| | ||||| |||| ||||||| ||||| |||| Sbjct: 14976117 taatcttgtagtcactaaacccagcttcaaggaaaagcttcttccactcttgctcatctc 14976058 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 127 atcttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgc 186 ||||||||||| |||||||| ||||| | ||||| |||| ||||||| ||||| |||||| Sbjct: 15009979 atcttgtagtcactaaacccggcttcgacgaaaaccttcttccactcttgctcgtctcgc 15009920 Query: 187 t 187 | Sbjct: 15009919 t 15009919 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 274 accaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggctttcttg 333 ||||| |||||||||||||||||||| || || ||||| || | ||||||||||| ||| Sbjct: 14749362 accactatatccatgattatcacctttccaccggcgtctctagatgggatggcttttttg 14749421 Query: 334 cagt 337 |||| Sbjct: 14749422 cagt 14749425 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 271 ccaaccaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggctttc 330 |||||||| |||||||||||||||||||| ||||| ||| || | |||||||||||| Sbjct: 14975977 ccaaccactatatccatgattatcaccttttctcccttgtctctagttgggatggctttc 14975918 Query: 331 ttgcagt 337 || |||| Sbjct: 14975917 ttacagt 14975911 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 463 ggagctccggcgacgacacgagggaggtccagcacggtgca 503 ||||| ||||||||||| | |||||||||||||||||||| Sbjct: 15005521 ggagccccggcgacgacgtgggggaggtccagcacggtgca 15005481 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 406 gccggtgggatggactcgaacatgtcgccggggacg 441 |||||||||| | ||||||||||||||||| |||| Sbjct: 15005584 gccggtgggacgctctcgaacatgtcgccggcgacg 15005549
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 125 taatcttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctc 184 ||||||||||||| |||||||||||||| | ||||| |||| ||||||| ||||| |||| Sbjct: 60013 taatcttgtagtcactaaacccagcttcaaggaaaagcttcttccactcttgctcatctc 60072 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 127 atcttgtagtcgctaaacccagcttctaagaaaatcttcctccactcatgctcctctcgc 186 ||||||||||| |||||||| ||||| | ||||| |||| ||||||| ||||| |||||| Sbjct: 26151 atcttgtagtcactaaacccggcttcgacgaaaaccttcttccactcttgctcgtctcgc 26210 Query: 187 t 187 | Sbjct: 26211 t 26211 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 271 ccaaccaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggctttc 330 |||||||| |||||||||||||||||||| ||||| ||| || | |||||||||||| Sbjct: 60153 ccaaccactatatccatgattatcaccttttctcccttgtctctagttgggatggctttc 60212 Query: 331 ttgcagt 337 || |||| Sbjct: 60213 ttacagt 60219 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 463 ggagctccggcgacgacacgagggaggtccagcacggtgca 503 ||||| ||||||||||| | |||||||||||||||||||| Sbjct: 30609 ggagccccggcgacgacgtgggggaggtccagcacggtgca 30649 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 406 gccggtgggatggactcgaacatgtcgccggggacg 441 |||||||||| | ||||||||||||||||| |||| Sbjct: 30546 gccggtgggacgctctcgaacatgtcgccggcgacg 30581
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 481 cgagggaggtccagcacggtgcacttgacgtgtgggaatgcct 523 ||||| ||||||||||| |||||||||||||||||||| |||| Sbjct: 60609 cgaggaaggtccagcacagtgcacttgacgtgtgggaaggcct 60567 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 487 aggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 ||||||||||| ||||||||||| || ||| | |||||||||||| Sbjct: 5346 aggtccagcacagtgcacttgacatgagggtaggccttggcgatg 5302 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 482 gagggaggtccagcacggtgcacttga 508 |||| |||||||||||||||||||||| Sbjct: 16568 gaggaaggtccagcacggtgcacttga 16594
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 481 cgagggaggtccagcacggtgcacttgacgtgtgggaatgcct 523 ||||| ||||||||||| |||||||||||||||||||| |||| Sbjct: 11438928 cgaggaaggtccagcacagtgcacttgacgtgtgggaaggcct 11438970 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 484 gggaggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 |||||||||||||| |||||||||| ||| ||||||||| ||||||| Sbjct: 7138307 gggaggtccagcaccgtgcacttgatgtgcgggaatgccgcggcgatg 7138354 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 388 ttgagtagaacggtgtccgccggtgggatggactcgaacatgtcgccggggacga 442 ||||||||||| | |||||| ||||| ||||| | |||||||||||||| ||||| Sbjct: 19030377 ttgagtagaacagcgtccgctggtggaatggattggaacatgtcgccggcgacga 19030431 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 487 aggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 ||||||||||| ||||||||||| || ||| | |||||||||||| Sbjct: 11494191 aggtccagcacagtgcacttgacatgagggtaggccttggcgatg 11494235 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 470 cggcgacgacacgagggaggtccagcacggtgcacttga 508 |||||||||| | |||||||||| |||||||||||||| Sbjct: 19030465 cggcgacgacgtgggggaggtccatcacggtgcacttga 19030503 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 482 gagggaggtccagcacggtgcacttga 508 |||| |||||||||||||||||||||| Sbjct: 11482969 gaggaaggtccagcacggtgcacttga 11482943 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 489 gtccagcacggtgcacttgacgtgtgggaatgcct 523 ||||||||||||| |||||| ||||||||| |||| Sbjct: 11354614 gtccagcacggtgaacttgatgtgtgggaaggcct 11354648 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 489 gtccagcacggtgcacttgacgtgtgggaatgcct 523 |||||||||||||||||||| |||||||| |||| Sbjct: 11330975 gtccagcacggtgcacttgatatgtgggaacgcct 11331009 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 487 aggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 ||||||||||| |||||||||| ||| ||| | |||||| ||||| Sbjct: 11549890 aggtccagcaccgtgcacttgatgtgcgggtacgccttgacgatg 11549934 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 292 atcaccttccctcccgcgtcccttgcagggatggctttcttgca 335 ||||||||||||||| | | | || |||||||||||||||||| Sbjct: 7137730 atcaccttccctccctcctttcgtgaagggatggctttcttgca 7137773
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 481 cgagggaggtccagcacggtgcacttgacgtgtgggaatgcct 523 ||||| ||||||||||| |||||||||||||||||||| |||| Sbjct: 11518117 cgaggaaggtccagcacagtgcacttgacgtgtgggaaggcct 11518159 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 484 gggaggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 |||||||||||||| |||||||||| ||| ||||||||| ||||||| Sbjct: 7204278 gggaggtccagcaccgtgcacttgatgtgcgggaatgccgcggcgatg 7204325 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 388 ttgagtagaacggtgtccgccggtgggatggactcgaacatgtcgccggggacga 442 ||||||||||| | |||||| ||||| ||||| | |||||||||||||| ||||| Sbjct: 19189026 ttgagtagaacagcgtccgctggtggaatggattggaacatgtcgccggcgacga 19189080 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 487 aggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 ||||||||||| ||||||||||| || ||| | |||||||||||| Sbjct: 11573380 aggtccagcacagtgcacttgacatgagggtaggccttggcgatg 11573424 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 470 cggcgacgacacgagggaggtccagcacggtgcacttga 508 |||||||||| | |||||||||| |||||||||||||| Sbjct: 19189114 cggcgacgacgtgggggaggtccatcacggtgcacttga 19189152 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 482 gagggaggtccagcacggtgcacttga 508 |||| |||||||||||||||||||||| Sbjct: 11562158 gaggaaggtccagcacggtgcacttga 11562132 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 489 gtccagcacggtgcacttgacgtgtgggaatgcct 523 ||||||||||||| |||||| ||||||||| |||| Sbjct: 11433803 gtccagcacggtgaacttgatgtgtgggaaggcct 11433837 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 489 gtccagcacggtgcacttgacgtgtgggaatgcct 523 |||||||||||||||||||| |||||||| |||| Sbjct: 11410164 gtccagcacggtgcacttgatatgtgggaacgcct 11410198 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 487 aggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 ||||||||||| |||||||||| ||| ||| | |||||| ||||| Sbjct: 11629079 aggtccagcaccgtgcacttgatgtgcgggtacgccttgacgatg 11629123 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 292 atcaccttccctcccgcgtcccttgcagggatggctttcttgca 335 ||||||||||||||| | | | || |||||||||||||||||| Sbjct: 7203701 atcaccttccctccctcctttcgtgaagggatggctttcttgca 7203744
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 484 gggaggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 |||||||||||||| |||||||||| ||| ||||||||| ||||||| Sbjct: 44248 gggaggtccagcaccgtgcacttgatgtgcgggaatgccgcggcgatg 44201 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 292 atcaccttccctcccgcgtcccttgcagggatggctttcttgca 335 ||||||||||||||| | | | || |||||||||||||||||| Sbjct: 44825 atcaccttccctccctcctttcgtgaagggatggctttcttgca 44782
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 484 gggaggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 |||||||||||||| |||||||||| ||| ||||||||| ||||||| Sbjct: 51527 gggaggtccagcaccgtgcacttgatgtgcgggaatgccgcggcgatg 51574 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 292 atcaccttccctcccgcgtcccttgcagggatggctttcttgca 335 ||||||||||||||| | | | || |||||||||||||||||| Sbjct: 50950 atcaccttccctccctcctttcgtgaagggatggctttcttgca 50993
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 274 accaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggctttcttg 333 ||||| |||||||||||||||||||| ||||| ||| || | |||||| ||||||||| Sbjct: 100090 accactatatccatgattatcacctttcctcctttgtctctaggagggatagctttcttg 100031 Query: 334 cagt 337 |||| Sbjct: 100030 cagt 100027 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 274 accaccatatccatgattatcaccttccctcc 305 ||||| || ||||||||||| ||||||||||| Sbjct: 103737 accactatgtccatgattatgaccttccctcc 103768
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 274 accaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggctttcttg 333 ||||| |||||||||||||||||||| ||||| ||| || | |||||| ||||||||| Sbjct: 5847 accactatatccatgattatcacctttcctcctttgtctctaggagggatagctttcttg 5788 Query: 334 cagt 337 |||| Sbjct: 5787 cagt 5784 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 274 accaccatatccatgattatcaccttccctcc 305 ||||| || ||||||||||| ||||||||||| Sbjct: 9494 accactatgtccatgattatgaccttccctcc 9525
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 274 accaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggctttcttg 333 ||||| |||||||||||||||||||| ||||| ||| || | |||||| ||||||||| Sbjct: 25365486 accactatatccatgattatcacctttcctcctttgtctctaggagggatagctttcttg 25365427 Query: 334 cagt 337 |||| Sbjct: 25365426 cagt 25365423 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 274 accaccatatccatgattatcaccttccctcc 305 ||||| || ||||||||||| ||||||||||| Sbjct: 25369133 accactatgtccatgattatgaccttccctcc 25369164
>dbj|AK068905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G03, full insert sequence Length = 1357 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 274 accaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggctttcttg 333 ||||| |||||||||||||||||||| ||||| ||| || | |||||| ||||||||| Sbjct: 931 accactatatccatgattatcacctttcctcctttgtctctaggagggatagctttcttg 872 Query: 334 cagt 337 |||| Sbjct: 871 cagt 868
>emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa0041M09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146519 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 274 accaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggctttcttg 333 ||||| |||||||||||||||||||| || || ||||| || | ||||||||||| ||| Sbjct: 124807 accactatatccatgattatcacctttccaccggcgtctctagatgggatggcttttttg 124748 Query: 334 cagt 337 |||| Sbjct: 124747 cagt 124744
>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133207 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 274 accaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggctttcttg 333 ||||| |||||||||||||||||||| || || ||||| || | ||||||||||| ||| Sbjct: 23721 accactatatccatgattatcacctttccaccggcgtctctagatgggatggcttttttg 23662 Query: 334 cagt 337 |||| Sbjct: 23661 cagt 23658
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 388 ttgagtagaacggtgtccgccggtgggatggactcgaacatgtcgccggggacga 442 ||||||||||| | |||||| ||||| ||||| | |||||||||||||| ||||| Sbjct: 133575 ttgagtagaacagcgtccgctggtggaatggattggaacatgtcgccggcgacga 133629 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 470 cggcgacgacacgagggaggtccagcacggtgcacttga 508 |||||||||| | |||||||||| |||||||||||||| Sbjct: 133663 cggcgacgacgtgggggaggtccatcacggtgcacttga 133701
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 388 ttgagtagaacggtgtccgccggtgggatggactcgaacatgtcgccggggacga 442 ||||||||||| | |||||| ||||| ||||| | |||||||||||||| ||||| Sbjct: 33195 ttgagtagaacagcgtccgctggtggaatggattggaacatgtcgccggcgacga 33249 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 470 cggcgacgacacgagggaggtccagcacggtgcacttga 508 |||||||||| | |||||||||| |||||||||||||| Sbjct: 33283 cggcgacgacgtgggggaggtccatcacggtgcacttga 33321
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 487 aggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 ||||||||||| ||||||||||| || ||| | |||||||||||| Sbjct: 119597 aggtccagcacagtgcacttgacatgagggtaggccttggcgatg 119553 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 482 gagggaggtccagcacggtgcacttga 508 |||| |||||||||||||||||||||| Sbjct: 130819 gaggaaggtccagcacggtgcacttga 130845 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 487 aggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 ||||||||||| |||||||||| ||| ||| | |||||| ||||| Sbjct: 63898 aggtccagcaccgtgcacttgatgtgcgggtacgccttgacgatg 63854
>gb|AC140068.18| Medicago truncatula clone mth2-15l24, complete sequence Length = 111620 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 121 ggagtaatcttgtagtcgctaaacccagc 149 ||||||||||||||||||||||| ||||| Sbjct: 26359 ggagtaatcttgtagtcgctaaaaccagc 26387 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 121 ggagtaatcttgtagtcgctaaacccagc 149 ||||||||||||||||| ||||| ||||| Sbjct: 45674 ggagtaatcttgtagtcactaaaaccagc 45702
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 487 aggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 ||||||||||| ||||||||||| || ||| | |||||||||||| Sbjct: 757 aggtccagcacagtgcacttgacatgagggtaggccttggcgatg 713
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 487 aggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 ||||||||||| ||||||||||| || ||| | |||||||||||| Sbjct: 762 aggtccagcacagtgcacttgacatgagggtaggccttggcgatg 718
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 268 gatccaaccaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggct 327 ||||||| |||||||| |||||||||||||| ||||| || || || ||||| || ||| Sbjct: 9843185 gatccaatcaccatatttatgattatcacctttcctccagcatctctcgcaggtattgct 9843244 Query: 328 ttcttgca 335 | |||||| Sbjct: 9843245 tccttgca 9843252 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 484 gggaggtccagcacggtgcacttgacgtgtgggaa 518 ||||||||||||||| |||||||||| || ||||| Sbjct: 9844765 gggaggtccagcacgctgcacttgacatgggggaa 9844799 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 387 cttgagtagaacggtgtccgccggtgggatggactcgaacatgtcgccggggacgaa 443 ||||||||| |||| || ||||| |||| | |||| ||||||||||||| |||||| Sbjct: 9844665 cttgagtagtacggcatctgccggcgggacgtactcaaacatgtcgccggcgacgaa 9844721 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 148 gcttctaagaaaatcttcctccactcatgctcctctcgct 187 ||||| || |||||||| |||||||||||||||| |||| Sbjct: 7317190 gcttcaaaaaaaatctttttccactcatgctcctcacgct 7317229
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 268 gatccaaccaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggct 327 ||||||| |||||||| |||||||||||||| ||||| || || || ||||| || ||| Sbjct: 133427 gatccaatcaccatatttatgattatcacctttcctccagcatctctcgcaggtattgct 133486 Query: 328 ttcttgca 335 | |||||| Sbjct: 133487 tccttgca 133494 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 484 gggaggtccagcacggtgcacttgacgtgtgggaa 518 ||||||||||||||| |||||||||| || ||||| Sbjct: 135007 gggaggtccagcacgctgcacttgacatgggggaa 135041 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 387 cttgagtagaacggtgtccgccggtgggatggactcgaacatgtcgccggggacgaa 443 ||||||||| |||| || ||||| |||| | |||| ||||||||||||| |||||| Sbjct: 134907 cttgagtagtacggcatctgccggcgggacgtactcaaacatgtcgccggcgacgaa 134963
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 268 gatccaaccaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggct 327 ||||||| |||||||| |||||||||||||| ||||| || || || ||||| || ||| Sbjct: 39820 gatccaatcaccatatttatgattatcacctttcctccagcatctctcgcaggtattgct 39879 Query: 328 ttcttgca 335 | |||||| Sbjct: 39880 tccttgca 39887 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 484 gggaggtccagcacggtgcacttgacgtgtgggaa 518 ||||||||||||||| |||||||||| || ||||| Sbjct: 41400 gggaggtccagcacgctgcacttgacatgggggaa 41434 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 387 cttgagtagaacggtgtccgccggtgggatggactcgaacatgtcgccggggacgaa 443 ||||||||| |||| || ||||| |||| | |||| ||||||||||||| |||||| Sbjct: 41300 cttgagtagtacggcatctgccggcgggacgtactcaaacatgtcgccggcgacgaa 41356
>gb|AY111551.1| Zea mays CL10273_1 mRNA sequence Length = 505 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 270 tccaaccaccatatccatgattatcaccttccctcccgcgtcccttgcagggatggcttt 329 |||||| |||||||| | |||||||||||| ||||| || ||||| | ||| || ||||| Sbjct: 309 tccaacaaccatatcaacgattatcacctttcctcctgcatccctggaaggtatagcttt 368 Query: 330 cttgcagt 337 ||| |||| Sbjct: 369 cttacagt 376
>gb|U76384.1|TAU76384 Triticum aestivum o-methyltransferase mRNA, complete cds Length = 1458 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Minus Query: 266 cagatccaaccaccatatccatgattatcaccttccctcc 305 |||| ||||||||||| | |||||||||||||||||||| Sbjct: 982 cagaaccaaccaccatgtttatgattatcaccttccctcc 943
>ref|XM_477999.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 482 gagggaggtccagcacggtgcacttga 508 |||| |||||||||||||||||||||| Sbjct: 676 gaggaaggtccagcacggtgcacttga 650
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 489 gtccagcacggtgcacttgacgtgtgggaatgcct 523 ||||||||||||| |||||| ||||||||| |||| Sbjct: 140972 gtccagcacggtgaacttgatgtgtgggaaggcct 141006 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 489 gtccagcacggtgcacttgacgtgtgggaatgcct 523 |||||||||||||||||||| |||||||| |||| Sbjct: 117333 gtccagcacggtgcacttgatatgtgggaacgcct 117367
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 482 gagggaggtccagcacggtgcacttga 508 |||| |||||||||||||||||||||| Sbjct: 16264582 gaggaaggtccagcacggtgcacttga 16264608 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 482 gagggaggtccagcacggtgcacttga 508 |||| |||||||||||||||||||||| Sbjct: 16220135 gaggaaggtccagcacggtgcacttga 16220109
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 482 gagggaggtccagcacggtgcacttga 508 |||| |||||||||||||||||||||| Sbjct: 796 gaggaaggtccagcacggtgcacttga 770
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_H04 Length = 151699 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 482 gagggaggtccagcacggtgcacttga 508 |||| |||||||||||||||||||||| Sbjct: 85020 gaggaaggtccagcacggtgcacttga 85046 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 482 gagggaggtccagcacggtgcacttga 508 |||| |||||||||||||||||||||| Sbjct: 40573 gaggaaggtccagcacggtgcacttga 40547
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 489 gtccagcacggtgcacttgacgtgtgggaatgcct 523 |||||||||||||||||||| |||||||| |||| Sbjct: 772 gtccagcacggtgcacttgatatgtgggaacgcct 738
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 493 agcacggtgcacttgacgtgtgggaatgccttggcgatg 531 |||||||||||||||| || |||||| |||||| ||||| Sbjct: 733 agcacggtgcacttgatgtctgggaaggccttgacgatg 695
>gb|AY337461.1| Mentha x piperita flavonoid 4'-O-methyltransferase (OMT4) mRNA, complete cds Length = 1032 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 369 ccaatcgtgcaaaatccacttgagtagaac 398 |||||||||||| |||||| |||||||||| Sbjct: 753 ccaatcgtgcaatatccacatgagtagaac 724
>gb|AY110291.1| Zea mays CL2555_1 mRNA sequence Length = 1319 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 487 aggtccagcacggtgcacttgacgtgtgggaatgcctt 524 |||||||||||| | ||||||||||| ||||| ||||| Sbjct: 715 aggtccagcacgctacacttgacgtgcgggaacgcctt 678
>dbj|AB091685.1| Glycyrrhiza echinata D7OMT mRNA for S-adenosyl-L-methionine: daidzein 7-0-methyltransferase, complete cds Length = 1121 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 353 tgcaatcgtcgtctggccaatcgtgcaaaatccacttgagtagaac 398 ||||||||| |||| ||||| |||||||||||||| |||||||| Sbjct: 855 tgcaatcgttatctgtccaattatgcaaaatccacttaagtagaac 810
>gb|L14063.1|MZEOMT Zea mays O-methyltransferase mRNA, complete cds Length = 1268 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 487 aggtccagcacggtgcacttgacgtgtgggaatgcctt 524 |||||||||||| | ||||||||||| ||||| ||||| Sbjct: 715 aggtccagcacgctacacttgacgtgcgggaacgcctt 678
>ref|XM_640234.1| Dictyostelium discoideum hypothetical protein (DDB0216958), partial mRNA Length = 4941 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 accaccatatccatgattatc 294 ||||||||||||||||||||| Sbjct: 2079 accaccatatccatgattatc 2059
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcggtgccgtgggcgccaccc 561 ||||||||||||||||||||| Sbjct: 22677910 gcggtgccgtgggcgccaccc 22677930
>gb|AC135501.4| Oryza sativa chromosome 3 BAC OSJNBb0011J16 genomic sequence, complete sequence Length = 124170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcggtgccgtgggcgccaccc 561 ||||||||||||||||||||| Sbjct: 15574 gcggtgccgtgggcgccaccc 15594
>gb|AY894417.1| Ruta graveolens 3,5-dimethoxyphenol O-methyltransferase mRNA, complete cds Length = 1590 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 ccaatcgtgcaaaatccacttgagtagaa 397 |||||||||| || ||||||||||||||| Sbjct: 820 ccaatcgtgcgaagtccacttgagtagaa 792
>gb|AF435007.1| Ocimum basilicum chavicol O-methyltransferase mRNA, complete cds Length = 1071 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 accatatccatgattatcaccttccctcc 305 |||| ||| |||||||||||||||||||| Sbjct: 878 accacatcgatgattatcaccttccctcc 850
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 gaatgccttggcgatgatcgc 536 ||||||||||||||||||||| Sbjct: 4235666 gaatgccttggcgatgatcgc 4235646
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 gcggtgccgtgggcgccaccc 561 ||||||||||||||||||||| Sbjct: 22670939 gcggtgccgtgggcgccaccc 22670959
>gb|AC115604.2| Dictyostelium discoideum chromosome 2 map 4354771-4414991 strain AX4, complete sequence Length = 60220 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 accaccatatccatgattatc 294 ||||||||||||||||||||| Sbjct: 9851 accaccatatccatgattatc 9831
>ref|XM_474786.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 484 gggaggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 |||||||| |||||| ||||||||| || || || |||||||||||| Sbjct: 674 gggaggtcaagcacgctgcacttgatgtccggaaacgccttggcgatg 627
>gb|AC144801.2| Mus musculus BAC clone RP24-276M2 from chromosome 18, complete sequence Length = 174303 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gatttatatttaagggtaga 91 |||||||||||||||||||| Sbjct: 4309 gatttatatttaagggtaga 4290
>gb|AC131651.3| Mus musculus BAC clone RP24-98G17 from chromosome 18, complete sequence Length = 162740 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gatttatatttaagggtaga 91 |||||||||||||||||||| Sbjct: 133822 gatttatatttaagggtaga 133803
>emb|AL136358.13| Human DNA sequence from clone RP11-183L8 on chromosome 13 Contains the 5' end of the LHFP gene for lipoma HMGIC fusion partner and a CpG island, complete sequence Length = 120507 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 caccttccctcccgcgtccc 313 |||||||||||||||||||| Sbjct: 71418 caccttccctcccgcgtccc 71437
>emb|AL137251.5| Human DNA sequence from clone RP1-141N5 on chromosome 6 Contains the 3' end of the gene for KIAA1913 protein, complete sequence Length = 122354 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gcttctaagaaaatcttcct 167 |||||||||||||||||||| Sbjct: 76155 gcttctaagaaaatcttcct 76136
>ref|XM_781023.1| PREDICTED: Strongylocentrotus purpuratus similar to carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase (LOC580997), mRNA Length = 4356 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 catgaagacatcgaacaaaacctc 230 ||||||||||||||||| |||||| Sbjct: 1005 catgaagacatcgaacagaacctc 982
>emb|AL607008.2|OSJN00119 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026E15, complete sequence Length = 137874 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 484 gggaggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 |||||||| |||||| ||||||||| || || || |||||||||||| Sbjct: 84455 gggaggtcaagcacgctgcacttgatgtccggaaacgccttggcgatg 84408
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 484 gggaggtccagcacggtgcacttgacgtgtgggaatgccttggcgatg 531 |||||||| |||||| ||||||||| || || || |||||||||||| Sbjct: 6530207 gggaggtcaagcacgctgcacttgatgtccggaaacgccttggcgatg 6530160
>dbj|AP004862.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B11 Length = 166004 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 148 gcttctaagaaaatcttcctccactcatgctcctctcgct 187 ||||| || |||||||| |||||||||||||||| |||| Sbjct: 23775 gcttcaaaaaaaatctttttccactcatgctcctcacgct 23814
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 148 gcttctaagaaaatcttcctccactcatgctcctctcgct 187 ||||| || |||||||| |||||||||||||||| |||| Sbjct: 152194 gcttcaaaaaaaatctttttccactcatgctcctcacgct 152233
>emb|BX537113.8| Zebrafish DNA sequence from clone CH211-207G17 in linkage group 16, complete sequence Length = 218597 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aagatttatatttaagggta 89 |||||||||||||||||||| Sbjct: 3681 aagatttatatttaagggta 3662
>emb|AJ311195.1|PHE311195 Pongine herpesvirus 3 partial ebna-LP gene Length = 417 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 tggctttcttgcagtgacgc 342 |||||||||||||||||||| Sbjct: 372 tggctttcttgcagtgacgc 391
>gb|AY107933.1| Zea mays PCO142167 mRNA sequence Length = 710 Score = 40.1 bits (20), Expect = 8.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 270 tccaaccaccatatccatgattatcaccttccctcc 305 ||||||||| ||||||| ||||||||||| ||||| Sbjct: 397 tccaaccacaatatccagtattatcaccttgcctcc 362
>emb|AL683857.8| Mouse DNA sequence from clone RP23-46O18 on chromosome X, complete sequence Length = 238677 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 accatatccatgattatcac 296 |||||||||||||||||||| Sbjct: 11490 accatatccatgattatcac 11471 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,097,935 Number of Sequences: 3902068 Number of extensions: 4097935 Number of successful extensions: 120584 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119849 Number of HSP's gapped (non-prelim): 724 length of query: 591 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 568 effective length of database: 17,143,297,704 effective search space: 9737393095872 effective search space used: 9737393095872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
