ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63e14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 ... 65 1e-10
2TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member ... 65 1e-10
3TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member ... 65 1e-10
4TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member ... 65 1e-10
5TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member ... 46 7e-05
6TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member ... 46 7e-05
7TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4 44 2e-04
8TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 ... 42 0.001
9TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member ... 42 0.001
10TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member ... 42 0.001
11TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member ... 42 0.001
12EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa en... 39 0.011
13B3AT_CHICK (P15575) Band 3 anion transport protein (Solute carri... 29 9.1
14HS2ST_DROME (P25722) Heparin sulfate O-sulfotransferase (EC 2.8.... 29 9.1

>TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 precursor|
          Length = 589

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 36/73 (49%), Positives = 45/73 (61%)
 Frame = -2

Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347
           RSVL  GSTG          Y  RS+MSG +QT  FFGY     Y FFLMLGT+ F +SL
Sbjct: 517 RSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSL 576

Query: 346 LFVRHIYRSIKCE 308
            F+R+IY ++K +
Sbjct: 577 KFIRYIYVNLKMD 589



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>TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member 1 precursor|
          Length = 606

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 36/73 (49%), Positives = 45/73 (61%)
 Frame = -2

Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347
           RSVL  GSTG          Y  RS+MSG +QT  FFGY     Y FFLMLGT+ F +SL
Sbjct: 534 RSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSL 593

Query: 346 LFVRHIYRSIKCE 308
            F+R+IY ++K +
Sbjct: 594 KFIRYIYVNLKMD 606



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>TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1 precursor|
          Length = 606

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 36/73 (49%), Positives = 45/73 (61%)
 Frame = -2

Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347
           RSVL  GSTG          Y  RS+MSG +QT  FFGY     Y FFLMLGT+ F +SL
Sbjct: 534 RSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSL 593

Query: 346 LFVRHIYRSIKCE 308
            F+R+IY ++K +
Sbjct: 594 KFIRYIYVNLKMD 606



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>TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member 1 precursor|
           (hMP70)
          Length = 606

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 36/73 (49%), Positives = 45/73 (61%)
 Frame = -2

Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347
           RSVL  GSTG          Y  RS+MSG +QT  FFGY     Y FFLMLGT+ F +SL
Sbjct: 534 RSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSL 593

Query: 346 LFVRHIYRSIKCE 308
            F+R+IY ++K +
Sbjct: 594 KFIRYIYVNLKMD 606



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>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor|
          Length = 587

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 24/72 (33%), Positives = 34/72 (47%)
 Frame = -2

Query: 523 SVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASLL 344
           S L   ST           Y  ++ M G  QTSF+FGYM        +M G +G+  +  
Sbjct: 516 SFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSA 575

Query: 343 FVRHIYRSIKCE 308
           FVR IY ++K +
Sbjct: 576 FVRKIYTNVKID 587



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>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor|
           (SM-11044-binding protein) (EP70-P-iso)
          Length = 589

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 24/72 (33%), Positives = 34/72 (47%)
 Frame = -2

Query: 523 SVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASLL 344
           S L   ST           Y  ++ M G  QTSF+FGYM        +M G +G+  +  
Sbjct: 518 SFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSA 577

Query: 343 FVRHIYRSIKCE 308
           FVR IY ++K +
Sbjct: 578 FVRKIYTNVKID 589



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>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4|
          Length = 625

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 18/48 (37%), Positives = 31/48 (64%)
 Frame = -2

Query: 451 DMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASLLFVRHIYRSIKCE 308
           D+  F+ +  +FGY   +   F+L+ GT+GF A+ +FVR IY ++K +
Sbjct: 578 DIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 625



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>TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 precursor|
          Length = 663

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = -2

Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347
           RS L  G T           + ++  ++G   T  +FGY   +   FFL  GT+GF A  
Sbjct: 591 RSFLTSGFTAVYFLVYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACF 650

Query: 346 LFVRHIYRSIKCE 308
            FV  IY  +K +
Sbjct: 651 WFVTKIYSVVKVD 663



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>TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member 2 precursor|
          Length = 663

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = -2

Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347
           RS L  G T           + ++  ++G   T  +FGY   +   FFL  GT+GF A  
Sbjct: 591 RSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACF 650

Query: 346 LFVRHIYRSIKCE 308
            FV  IY  +K +
Sbjct: 651 WFVTKIYSVVKVD 663



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>TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member 2 precursor|
           (p76)
          Length = 663

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = -2

Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347
           RS L  G T           + ++  ++G   T  +FGY   +   FFL  GT+GF A  
Sbjct: 591 RSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACF 650

Query: 346 LFVRHIYRSIKCE 308
            FV  IY  +K +
Sbjct: 651 WFVTKIYSVVKVD 663



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>TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member 2 precursor|
          Length = 662

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = -2

Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347
           RS L  G T           + ++  ++G   T  +FGY   +   FFL  GT+GF A  
Sbjct: 590 RSFLTSGFTAVYFLIYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACF 649

Query: 346 LFVRHIYRSIKCE 308
            FV  IY  +K +
Sbjct: 650 WFVTKIYSVVKVD 662



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>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane|
           protein) (Pheromone alpha-factor transporter) (Acidic 24
           kDa late endocytic intermediate component)
          Length = 667

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = -2

Query: 448 MSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASLLFVRHIYRSIKCE 308
           + GF     + GY + +     L+ G++GF +S+LFVR IY SIK +
Sbjct: 621 LGGFTTIVLYVGYSSVISLLCCLVTGSIGFISSMLFVRKIYSSIKVD 667



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>B3AT_CHICK (P15575) Band 3 anion transport protein (Solute carrier family 4|
           member 1)
          Length = 922

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = -1

Query: 329 LPFHQVRVI*ARVVTSDMAITREAQEKQNNRLLMGLLLNFVSKQVACPPYEPPLKLH 159
           L +H++R   A  V +D    R+A        L+G L  F+   +  PP E P + H
Sbjct: 283 LSYHEIRRA-AATVMADRVFRRDAYLCGGRAELLGGLQGFLEASIVLPPQEVPSEQH 338



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>HS2ST_DROME (P25722) Heparin sulfate O-sulfotransferase (EC 2.8.2.-)|
          Length = 349

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = -2

Query: 211 LC-PSKLHVLHMNLLSNYIILQVP 143
           LC P+K HVLH+N+ +N  +L +P
Sbjct: 95  LCKPNKFHVLHINVTANMHVLSLP 118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,045,792
Number of Sequences: 219361
Number of extensions: 1222866
Number of successful extensions: 2503
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2503
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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