ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009239.1| Triticum aestivum clone wlk1.pk0004.e7:fis, full ... 892 0.0
2gb|AF479037.1| Triticum aestivum 1-acy1-glycerol-3-phosphate acy... 115 2e-22
3emb|Z29518.1|ZM1AG3PAT Z.mays (Black Mexican Sweet) mRNA for 1-a... 82 2e-12
4gb|BT016275.1| Zea mays clone Contig108 mRNA sequence 70 8e-09
5gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
6gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
9gb|AY109624.1| Zea mays CL2286_1 mRNA sequence 58 3e-05
10dbj|AB218780.1| Prunus mume Pm22 mRNA for 1-acyl-sn-glycerol-3-p... 50 0.008
11gb|AF213937.1|AF213937 Prunus dulcis 1-acyl-sn-glycerol-3-phosph... 50 0.008
12ref|XM_660146.1| Cryptosporidium hominis TU502 hypothetical prot... 44 0.47
13ref|XM_626541.1| Cryptosporidium parvum Iowa II hypothetical pro... 44 0.47
14emb|AL669974.6| Mouse DNA sequence from clone RP23-229E11 on chr... 44 0.47
15gb|AC121847.2| Mus musculus BAC clone RP24-86M13 from 3, complet... 42 1.8
16gb|AC121897.2| Mus musculus BAC clone RP24-160L24 from 3, comple... 42 1.8
17gb|AC102786.7| Mus musculus chromosome 1, clone RP23-241G23, com... 42 1.8
18gb|AC164008.2| Mus musculus chromosome 1, clone RP23-311L17, com... 42 1.8
19gb|AC093851.5| Homo sapiens chromosome 4 clone RP11-499N1, compl... 42 1.8
20gb|AE008858.1| Salmonella typhimurium LT2, section 162 of 220 of... 42 1.8
21emb|AL627281.1| Salmonella enterica serovar Typhi (Salmonella ty... 42 1.8
22gb|AC119566.11| Homo sapiens 12 BAC RP11-41H6 (Roswell Park Canc... 42 1.8
23gb|AC073866.16| Homo sapiens 12q BAC RP11-120B18 (Roswell Park C... 42 1.8
24dbj|AK155807.1| Mus musculus B6-derived CD11 +ve dendritic cells... 42 1.8
25dbj|AK154312.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 1.8
26ref|NM_009631.1| Mus musculus adenosine A3 receptor (Adora3), mRNA 42 1.8
27dbj|AK013534.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 42 1.8
28gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 42 1.8
29gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 42 1.8
30gb|AF069778.1|AF069778 Mus musculus A3 adenosine receptor gene, ... 42 1.8
31gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 42 1.8
32gb|AC025786.16| Mus musculus chromosome 3, clone RP23-169H9, com... 42 1.8
33gb|AC002070.1|HSAC002070 Human BAC clone 7E17 from 12q, complete... 42 1.8
34gb|AC163015.4| Mus musculus chromosome 3, clone RP23-149I5, comp... 40 7.3
35gb|AC008334.8| Drosophila melanogaster clone BACR08K05, complete... 40 7.3
36gb|AC124535.4| Mus musculus BAC clone RP23-331C24 from chromosom... 40 7.3
37gb|AC135115.5| Mus musculus BAC clone RP24-251K13 from chromosom... 40 7.3
38gb|AC112258.4| Mus musculus BAC clone RP23-169M10 from 8, comple... 40 7.3
39gb|AC123814.3| Mus musculus BAC clone RP24-235M22 from 10, compl... 40 7.3
40emb|Z93403.1|HS308O1 Human DNA sequence from clone RP1-308O1 on ... 40 7.3
41emb|AL450313.9| Human DNA sequence from clone RP13-259N13 on chr... 40 7.3
42emb|CR550304.13| Zebrafish DNA sequence from clone CH211-150I13 ... 40 7.3
43emb|AL845317.7| Mouse DNA sequence from clone RP23-222K9 on chro... 40 7.3
44dbj|AK140684.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 7.3
45dbj|AK138093.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 7.3
46dbj|AK148789.1| Mus musculus 2 days neonate sympathetic ganglion... 40 7.3
47gb|AC156391.6| Mus musculus 10 BAC RP24-258P4 (Roswell Park Canc... 40 7.3
48gb|AC012489.8| Homo sapiens BAC clone RP11-93I3 from 2, complete... 40 7.3
49ref|XM_221028.3| PREDICTED: Rattus norvegicus similar to KIAA163... 40 7.3
50gb|AC139868.4| Mus musculus BAC clone RP23-366P1 from chromosome... 40 7.3
51gb|AC002072.1|AC002072 Human PAC clone RP1-218B13 from Xq23, com... 40 7.3
52gb|AE003496.4| Drosophila melanogaster chromosome X, section 48 ... 40 7.3
53emb|AL929332.15| Mouse DNA sequence from clone RP23-476I19 on ch... 40 7.3
54gb|AC155170.3| Mus musculus BAC clone RP23-116K3 from chromosome... 40 7.3 
>gb|BT009239.1| Triticum aestivum clone wlk1.pk0004.e7:fis, full insert mRNA sequence
          Length = 1415

 Score =  892 bits (450), Expect = 0.0
 Identities = 521/543 (95%), Gaps = 5/543 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    gcgattcctggtatggcaaaacaaatctttacaagtcattacaaagtagagaaagaagga 60
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1367 gcgattcctggtatggcaaagcaaatctttacaagtcattacaaagtagagaaagaagga 1308

                                                                        
Query: 61   agtc----cacagttctcaccacacaatactcctgaagctcttaccgaggacaacaagga 116
            ||      |||||||||| |||||||| | ||||||||||||||||||||||||||||||
Sbjct: 1307 agaaagctcacagttctcgccacacaaaattcctgaagctcttaccgaggacaacaagga 1248

                                                                        
Query: 117  catactagattttgacccatggagcctgtgtctacatatattctgaacataataaattgg 176
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1247 catactagattt-gacccatggagcctgtgtctacatatattctgaacataataaattgg 1189

                                                                        
Query: 177  cagttcccctatagactgaatttcacacgggctatcaatccctcttcactcggtcccttg 236
            ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 1188 cagttcccctatagactgaatttcacacgagctatcaatccttcttcactcggtcccttg 1129

                                                                        
Query: 237  ctgctttagcagagcttgagcgctcggcctgcgagaacatgatgaatacatgcataacgg 296
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1128 ctgctttcgcagagcttgagcgctcggcctgcgagaacatgatgaatacatgcataacgg 1069

                                                                        
Query: 297  cggtcaccattgccaatccagtagcaaagaggatcactcctttccacgttgacaagagct 356
            |||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 1068 cggttaccattgccaatccagaagcaaagaggatcactcctttccacgtcgacaagagct 1009

                                                                        
Query: 357  gggtccactgtaagaatctatgagcgccatataggaggagacatgaccaagacagaacca 416
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 1008 gggtccactgtaagaatctatgagcaccatataggaggagacatgaccaagacaggacca 949

                                                                        
Query: 417  ccatcaaagatttcactggacgaccaattggtataatttcctcatcaaaagtaccagttg 476
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 948  ccatcaaagatttcactggacggccaattggtataatttcctcatcaaaagtaccagttg 889

                                                                        
Query: 477  ttatatgtctgtccaataacgcgtcctttgctacaaatatatctttgcaccattttgaaa 536
             ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888  ctatatgtttgtccaataacgcgtcctttgctacaaatatatctttgcaccattttgaaa 829

               
Query: 537  cat 539
            |||
Sbjct: 828  cat 826
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>gb|AF479037.1| Triticum aestivum 1-acy1-glycerol-3-phosphate acyltransferase mRNA,
           partial cds
          Length = 714

 Score =  115 bits (58), Expect = 2e-22
 Identities = 140/167 (83%), Gaps = 3/167 (1%)
 Strand = Plus / Minus

                                                                       
Query: 375 tatgagcgccatataggaggagacatgaccaagacagaaccaccatcaaa-gatttcact 433
           ||||||| | ||||||||||||||||| ||| | | |  || | |||||| | || || |
Sbjct: 713 tatgagcccnatataggaggagacatgnccangccnggnccncnatcaaaagtttncatt 654

                                                                       
Query: 434 ggacgaccaattggtataatttcctcatcaaaagtaccagttgttatatgtctgtcc-aa 492
           ||||| | ||| || ||| |||| |||||||||| |||||||| ||||||| ||||| ||
Sbjct: 653 ggacgccnaatgggaatattttcntcatcaaaag-accagttgctatatgtttgtcccaa 595

                                                          
Query: 493 taacgcgtcctttgctacaaatatatctttgcaccattttgaaacat 539
           ||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 594 taaggcgtcntttgctacaaatatgtctttgcaccattttgaaacat 548
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>emb|Z29518.1|ZM1AG3PAT Z.mays (Black Mexican Sweet) mRNA for 1-acyl-glycerol-3-phosphate
            acyltransferase (putative)
          Length = 1518

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 104/125 (83%)
 Strand = Plus / Minus

                                                                        
Query: 415  caccatcaaagatttcactggacgaccaattggtataatttcctcatcaaaagtaccagt 474
            ||||| ||| |||||||||||||| ||||| ||| |||| |||||||| ||||| || ||
Sbjct: 1053 caccagcaatgatttcactggacggccaataggtctaatctcctcatcgaaagtgcctgt 994

                                                                        
Query: 475  tgttatatgtctgtccaataacgcgtcctttgctacaaatatatctttgcaccattttga 534
            ||  | |||  |||||| ||| || |||||||| ||||| || ||||| |||||||||||
Sbjct: 993  tgccaaatgcttgtccagtaaggcatcctttgccacaaaaatgtctttacaccattttga 934

                 
Query: 535  aacat 539
            |||||
Sbjct: 933  aacat 929



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 248  gagcttgagcgctcggcctgcgagaacatgatgaatacatgcat 291
            ||||| || ||||| ||||| |||||||||||||| ||||||||
Sbjct: 1220 gagctcgaccgctcagcctgggagaacatgatgaagacatgcat 1177
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>gb|BT016275.1| Zea mays clone Contig108 mRNA sequence
          Length = 1026

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 101/123 (82%)
 Strand = Plus / Minus

                                                                       
Query: 415 caccatcaaagatttcactggacgaccaattggtataatttcctcatcaaaagtaccagt 474
           ||||| ||| ||||||||||| || || || ||| |||| |||||||| ||||| || ||
Sbjct: 488 caccagcaatgatttcactgggcggccgataggtctaatctcctcatcgaaagtgcctgt 429

                                                                       
Query: 475 tgttatatgtctgtccaataacgcgtcctttgctacaaatatatctttgcaccattttga 534
           ||  | |||| |||||| ||| || |||||||| ||||| || ||||| |||||||||||
Sbjct: 428 tgccaaatgtttgtccagtaaggcatcctttgccacaaaaatgtctttacaccattttga 369

              
Query: 535 aac 537
           |||
Sbjct: 368 aac 366



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 248 gagcttgagcgctcggcctgcgagaacatgatgaatacatgcat 291
           ||||| || ||||| ||||| |||||||||||||| || |||||
Sbjct: 655 gagctcgaccgctcagcctgggagaacatgatgaagacgtgcat 612
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>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0095P22, complete sequence
          Length = 162766

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 501    cctttgctacaaatatatctttgcaccattttgaaacat 539
              ||||||||||||| || ||||||||||||||||||||||
Sbjct: 146631 cctttgctacaaagatgtctttgcaccattttgaaacat 146669



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                        
Query: 248    gagcttgagcgctcggcctgcgagaacatgatgaatacatgcataacggcggtcacca 305
              ||||| || ||||| | |||||||||||||||||| |||||||| || || |||||||
Sbjct: 145600 gagctcgatcgctctgactgcgagaacatgatgaagacatgcatgaccgccgtcacca 145657



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                   
Query: 416    accatcaaagatttcactggacgaccaattggtataatttcctcatcaaaagt 468
              |||| ||| ||||| ||||| || ||||||||| |||| ||||||||||||||
Sbjct: 146431 accagcaatgattttactgggcggccaattggtctaatctcctcatcaaaagt 146483
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>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0096I10, complete sequence
          Length = 171946

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 501   cctttgctacaaatatatctttgcaccattttgaaacat 539
             ||||||||||||| || ||||||||||||||||||||||
Sbjct: 63467 cctttgctacaaagatgtctttgcaccattttgaaacat 63429



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                       
Query: 248   gagcttgagcgctcggcctgcgagaacatgatgaatacatgcataacggcggtcacca 305
             ||||| || ||||| | |||||||||||||||||| |||||||| || || |||||||
Sbjct: 64498 gagctcgatcgctctgactgcgagaacatgatgaagacatgcatgaccgccgtcacca 64441



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 416   accatcaaagatttcactggacgaccaattggtataatttcctcatcaaaagt 468
             |||| ||| ||||| ||||| || ||||||||| |||| ||||||||||||||
Sbjct: 63667 accagcaatgattttactgggcggccaattggtctaatctcctcatcaaaagt 63615
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 501      cctttgctacaaatatatctttgcaccattttgaaacat 539
                ||||||||||||| || ||||||||||||||||||||||
Sbjct: 24345522 cctttgctacaaagatgtctttgcaccattttgaaacat 24345560



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                          
Query: 248      gagcttgagcgctcggcctgcgagaacatgatgaatacatgcataacggcggtcacca 305
                ||||| || ||||| | |||||||||||||||||| |||||||| || || |||||||
Sbjct: 24344491 gagctcgatcgctctgactgcgagaacatgatgaagacatgcatgaccgccgtcacca 24344548



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 416      accatcaaagatttcactggacgaccaattggtataatttcctcatcaaaagt 468
                |||| ||| ||||| ||||| || ||||||||| |||| ||||||||||||||
Sbjct: 24345322 accagcaatgattttactgggcggccaattggtctaatctcctcatcaaaagt 24345374
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 501      cctttgctacaaatatatctttgcaccattttgaaacat 539
                ||||||||||||| || ||||||||||||||||||||||
Sbjct: 24657191 cctttgctacaaagatgtctttgcaccattttgaaacat 24657229



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                          
Query: 248      gagcttgagcgctcggcctgcgagaacatgatgaatacatgcataacggcggtcacca 305
                ||||| || ||||| | |||||||||||||||||| |||||||| || || |||||||
Sbjct: 24656160 gagctcgatcgctctgactgcgagaacatgatgaagacatgcatgaccgccgtcacca 24656217



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 416      accatcaaagatttcactggacgaccaattggtataatttcctcatcaaaagt 468
                |||| ||| ||||| ||||| || ||||||||| |||| ||||||||||||||
Sbjct: 24656991 accagcaatgattttactgggcggccaattggtctaatctcctcatcaaaagt 24657043
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>gb|AY109624.1| Zea mays CL2286_1 mRNA sequence
          Length = 1592

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 100/125 (80%)
 Strand = Plus / Minus

                                                                        
Query: 415  caccatcaaagatttcactggacgaccaattggtataatttcctcatcaaaagtaccagt 474
            ||||| ||| |||||||||||||| ||||| ||| |||| |||||||| ||||| || ||
Sbjct: 1132 caccagcaatgatttcactggacggccaataggtctaatctcctcatcgaaagtgcctgt 1073

                                                                        
Query: 475  tgttatatgtctgtccaataacgcgtcctttgctacaaatatatctttgcaccattttga 534
            ||  | |||  |||||| ||| || |||||||| ||     | ||||| |||||||||||
Sbjct: 1072 tgccaaatgcttgtccagtaaggcatcctttgccacnntnntgtctttacaccattttga 1013

                 
Query: 535  aacat 539
            |||||
Sbjct: 1012 aacat 1008
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>dbj|AB218780.1| Prunus mume Pm22 mRNA for 1-acyl-sn-glycerol-3-phosphate
            acyltransferase, complete cds
          Length = 1741

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 486  tgtccaataacgcgtcctttgctacaaatatatctttgcaccatt 530
            ||||||| || || ||||| ||||||||||||||||| |||||||
Sbjct: 1047 tgtccaacaatgcatccttggctacaaatatatctttacaccatt 1003
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>gb|AF213937.1|AF213937 Prunus dulcis 1-acyl-sn-glycerol-3-phosphate acyltransferase mRNA,
           complete cds
          Length = 1396

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 486 tgtccaataacgcgtcctttgctacaaatatatctttgcaccatt 530
           ||||||| || || ||||| ||||||||||||||||| |||||||
Sbjct: 794 tgtccaacaatgcatccttggctacaaatatatctttacaccatt 750
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>ref|XM_660146.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.20376)
           partial mRNA
          Length = 1587

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 152 atatattctgaacataataaat 173
           ||||||||||||||||||||||
Sbjct: 183 atatattctgaacataataaat 204
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>ref|XM_626541.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_3540),
           partial mRNA
          Length = 7338

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 152 atatattctgaacataataaat 173
           ||||||||||||||||||||||
Sbjct: 186 atatattctgaacataataaat 207
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>emb|AL669974.6| Mouse DNA sequence from clone RP23-229E11 on chromosome X, complete
              sequence
          Length = 188048

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 461    tcaaaagtaccagttgttatat 482
              ||||||||||||||||||||||
Sbjct: 148274 tcaaaagtaccagttgttatat 148253
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>gb|AC121847.2| Mus musculus BAC clone RP24-86M13 from 3, complete sequence
          Length = 190165

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 346   tgacaagagctgggtccactg 366
             |||||||||||||||||||||
Sbjct: 28201 tgacaagagctgggtccactg 28181
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>gb|AC121897.2| Mus musculus BAC clone RP24-160L24 from 3, complete sequence
          Length = 143234

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 346   tgacaagagctgggtccactg 366
             |||||||||||||||||||||
Sbjct: 66867 tgacaagagctgggtccactg 66847
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>gb|AC102786.7| Mus musculus chromosome 1, clone RP23-241G23, complete sequence
          Length = 160574

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 51    gaaagaaggaagtccacagtt 71
             |||||||||||||||||||||
Sbjct: 29739 gaaagaaggaagtccacagtt 29719
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>gb|AC164008.2| Mus musculus chromosome 1, clone RP23-311L17, complete sequence
          Length = 171582

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    gaaagaaggaagtccacagtt 71
             |||||||||||||||||||||
Sbjct: 55433 gaaagaaggaagtccacagtt 55453
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>gb|AC093851.5| Homo sapiens chromosome 4 clone RP11-499N1, complete sequence
          Length = 200968

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 240   ctttagcagagcttgagcgct 260
             |||||||||||||||||||||
Sbjct: 22487 ctttagcagagcttgagcgct 22507
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>gb|AE008858.1| Salmonella typhimurium LT2, section 162 of 220 of the complete genome
          Length = 20646

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    ttacaaagtagagaaagaagg 59
             |||||||||||||||||||||
Sbjct: 13775 ttacaaagtagagaaagaagg 13755
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>emb|AL627281.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 17/20
          Length = 265050

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 39     ttacaaagtagagaaagaagg 59
              |||||||||||||||||||||
Sbjct: 251260 ttacaaagtagagaaagaagg 251280
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>gb|AC119566.11| Homo sapiens 12 BAC RP11-41H6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 70009

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 240   ctttagcagagcttgagcgct 260
             |||||||||||||||||||||
Sbjct: 26479 ctttagcagagcttgagcgct 26459
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>gb|AC073866.16| Homo sapiens 12q BAC RP11-120B18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 153756

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 240   ctttagcagagcttgagcgct 260
             |||||||||||||||||||||
Sbjct: 35679 ctttagcagagcttgagcgct 35659
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>dbj|AK155807.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730224K17
           product:adenosine A3 receptor, full insert sequence
          Length = 1664

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 346 tgacaagagctgggtccactg 366
           |||||||||||||||||||||
Sbjct: 25  tgacaagagctgggtccactg 45
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>dbj|AK154312.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630018K21
           product:adenosine A3 receptor, full insert sequence
          Length = 1799

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 346 tgacaagagctgggtccactg 366
           |||||||||||||||||||||
Sbjct: 300 tgacaagagctgggtccactg 320
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>ref|NM_009631.1| Mus musculus adenosine A3 receptor (Adora3), mRNA
          Length = 1733

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 346 tgacaagagctgggtccactg 366
           |||||||||||||||||||||
Sbjct: 234 tgacaagagctgggtccactg 254
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>dbj|AK013534.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length
           enriched library, clone:2900016D13 product:A3 ADENOSINE
           RECEPTOR, full insert sequence
          Length = 2372

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 346 tgacaagagctgggtccactg 366
           |||||||||||||||||||||
Sbjct: 297 tgacaagagctgggtccactg 317
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 39      ttacaaagtagagaaagaagg 59
               |||||||||||||||||||||
Sbjct: 3411630 ttacaaagtagagaaagaagg 3411610
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 39      ttacaaagtagagaaagaagg 59
               |||||||||||||||||||||
Sbjct: 4208907 ttacaaagtagagaaagaagg 4208927
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>gb|AF069778.1|AF069778 Mus musculus A3 adenosine receptor gene, complete cds
          Length = 5886

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 346  tgacaagagctgggtccactg 366
            |||||||||||||||||||||
Sbjct: 2238 tgacaagagctgggtccactg 2258
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 39      ttacaaagtagagaaagaagg 59
               |||||||||||||||||||||
Sbjct: 3559686 ttacaaagtagagaaagaagg 3559666
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>gb|AC025786.16| Mus musculus chromosome 3, clone RP23-169H9, complete sequence
          Length = 181293

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 346    tgacaagagctgggtccactg 366
              |||||||||||||||||||||
Sbjct: 162258 tgacaagagctgggtccactg 162238
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>gb|AC002070.1|HSAC002070 Human BAC clone 7E17 from 12q, complete sequence
          Length = 165197

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 240   ctttagcagagcttgagcgct 260
             |||||||||||||||||||||
Sbjct: 78224 ctttagcagagcttgagcgct 78244
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>gb|AC163015.4| Mus musculus chromosome 3, clone RP23-149I5, complete sequence
          Length = 200423

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   ccttgctgctttagcagagc 251
             ||||||||||||||||||||
Sbjct: 70201 ccttgctgctttagcagagc 70220
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>gb|AC008334.8| Drosophila melanogaster clone BACR08K05, complete sequence
          Length = 154336

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   atatattctgaacataataa 171
             ||||||||||||||||||||
Sbjct: 84150 atatattctgaacataataa 84131
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>gb|AC124535.4| Mus musculus BAC clone RP23-331C24 from chromosome 18, complete sequence
          Length = 206191

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     atggcaaaacaaatctttac 32
              ||||||||||||||||||||
Sbjct: 201606 atggcaaaacaaatctttac 201625
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>gb|AC135115.5| Mus musculus BAC clone RP24-251K13 from chromosome 10, complete sequence
          Length = 178241

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     tcattacaaagtagagaaag 55
              ||||||||||||||||||||
Sbjct: 160924 tcattacaaagtagagaaag 160943
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>gb|AC112258.4| Mus musculus BAC clone RP23-169M10 from 8, complete sequence
          Length = 203519

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  tcactcctttccacgttgac 349
            ||||||||||||||||||||
Sbjct: 1226 tcactcctttccacgttgac 1207
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>gb|AC123814.3| Mus musculus BAC clone RP24-235M22 from 10, complete sequence
          Length = 159486

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     tcattacaaagtagagaaag 55
              ||||||||||||||||||||
Sbjct: 115855 tcattacaaagtagagaaag 115836
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>emb|Z93403.1|HS308O1 Human DNA sequence from clone RP1-308O1 on chromosome Xp11.3-11.4
             Contains part of a novel gene, complete sequence
          Length = 166715

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   ttagcagagcttgagcgctc 261
             ||||||||||||||||||||
Sbjct: 20824 ttagcagagcttgagcgctc 20843
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>emb|AL450313.9| Human DNA sequence from clone RP13-259N13 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 43981

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   ttagcagagcttgagcgctc 261
             ||||||||||||||||||||
Sbjct: 12580 ttagcagagcttgagcgctc 12599
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>emb|CR550304.13| Zebrafish DNA sequence from clone CH211-150I13 in linkage group 13,
              complete sequence
          Length = 118999

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     cattacaaagtagagaaaga 56
              ||||||||||||||||||||
Sbjct: 108411 cattacaaagtagagaaaga 108392
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>emb|AL845317.7| Mouse DNA sequence from clone RP23-222K9 on chromosome 4 Contains a
             ribosomal protein L7 (Rpl7) pseudogene, the gene for a
             novel protein similar to stathmin 1 Stmn1 and a eukaryotic
             translation initiation factor 3 subunit 8 (Eif3s8)
             pseudogene, complete sequence
          Length = 181889

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    tagagaaagaaggaagtcca 66
             ||||||||||||||||||||
Sbjct: 19784 tagagaaagaaggaagtcca 19803
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>dbj|AK140684.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:B930089B07
            product:unclassifiable, full insert sequence
          Length = 1754

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  tgtctacatatattctgaac 164
            ||||||||||||||||||||
Sbjct: 1459 tgtctacatatattctgaac 1440
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>dbj|AK138093.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130090I24 product:protein-L-isoaspartate
            (D-aspartate) O-methyltransferase 1, full insert sequence
          Length = 4596

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  tgtctacatatattctgaac 164
            ||||||||||||||||||||
Sbjct: 3842 tgtctacatatattctgaac 3823
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>dbj|AK148789.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
            full-length enriched library, clone:7120446L02
            product:protein-L-isoaspartate (D-aspartate)
            O-methyltransferase 1, full insert sequence
          Length = 1370

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  tgtctacatatattctgaac 164
            ||||||||||||||||||||
Sbjct: 1098 tgtctacatatattctgaac 1079
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>gb|AC156391.6| Mus musculus 10 BAC RP24-258P4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 186703

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    tgtctacatatattctgaac 164
              ||||||||||||||||||||
Sbjct: 136459 tgtctacatatattctgaac 136440
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>gb|AC012489.8| Homo sapiens BAC clone RP11-93I3 from 2, complete sequence
          Length = 120776

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   aggagacatgaccaagacag 411
             ||||||||||||||||||||
Sbjct: 89279 aggagacatgaccaagacag 89298
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>ref|XM_221028.3| PREDICTED: Rattus norvegicus similar to KIAA1636 protein (predicted)
            (LOC303599), mRNA
          Length = 6882

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   aagaaggaagtccacagttc 72
            ||||||||||||||||||||
Sbjct: 4263 aagaaggaagtccacagttc 4244
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>gb|AC139868.4| Mus musculus BAC clone RP23-366P1 from chromosome 18, complete sequence
          Length = 154607

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     atggcaaaacaaatctttac 32
              ||||||||||||||||||||
Sbjct: 107203 atggcaaaacaaatctttac 107184
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>gb|AC002072.1|AC002072 Human PAC clone RP1-218B13 from Xq23, complete sequence
          Length = 114956

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    aaagtagagaaagaaggaag 62
             ||||||||||||||||||||
Sbjct: 54618 aaagtagagaaagaaggaag 54637
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>gb|AE003496.4| Drosophila melanogaster chromosome X, section 48 of 74 of the complete
              sequence
          Length = 299868

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    atatattctgaacataataa 171
              ||||||||||||||||||||
Sbjct: 268699 atatattctgaacataataa 268680
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>emb|AL929332.15| Mouse DNA sequence from clone RP23-476I19 on chromosome 2, complete
             sequence
          Length = 112785

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    agttctcaccacacaatact 87
             ||||||||||||||||||||
Sbjct: 97700 agttctcaccacacaatact 97681
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>gb|AC155170.3| Mus musculus BAC clone RP23-116K3 from chromosome 8, complete sequence
          Length = 228121

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   tcactcctttccacgttgac 349
             ||||||||||||||||||||
Sbjct: 81029 tcactcctttccacgttgac 81010


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,042,422
Number of Sequences: 3902068
Number of extensions: 5042422
Number of successful extensions: 103144
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102929
Number of HSP's gapped (non-prelim): 211
length of query: 539
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 516
effective length of database: 17,143,297,704
effective search space: 8845941615264
effective search space used: 8845941615264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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