Clone Name | rbah63g22 |
---|---|
Clone Library Name | barley_pub |
>gb|AF262983.1|AF262983 Triticum aestivum cyclophilin A-2 (CyP2) mRNA, complete cds Length = 845 Score = 182 bits (92), Expect = 4e-43 Identities = 110/116 (94%) Strand = Plus / Minus Query: 18 ggaagataaccatggcggccggacgcagatccagcagcctaaagagtccacctaaaaccc 77 |||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||||| Sbjct: 776 ggaagataaccatggccgccggacacagatccagcggccaaaagagtccacctaaaaccc 717 Query: 78 tcctaaaccaaccacggagatctcatcggacggacaggggcaagacacgacacgac 133 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 716 tcctaaaccaaccacggagatctcatcggacggacaaggggaagacacgacacgac 661 Score = 165 bits (83), Expect = 1e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 215 ctagagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcc 274 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 586 ctagagctggccgcagtcggcgatgacgacttgcttggagcaggtgccgctgcgggagcc 527 Query: 275 caccttctcgatgttcttgacgacgtc 301 ||||||||||||||||||||||||||| Sbjct: 526 caccttctcgatgttcttgacgacgtc 500
>gb|AY456122.1| Triticum aestivum cyclophilin A (CYP18-2) gene, complete cds Length = 781 Score = 182 bits (92), Expect = 4e-43 Identities = 110/116 (94%) Strand = Plus / Minus Query: 18 ggaagataaccatggcggccggacgcagatccagcagcctaaagagtccacctaaaaccc 77 |||||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||||| Sbjct: 740 ggaagataaccatggccgccggacacagatccagcggccaaaagagtccacctaaaaccc 681 Query: 78 tcctaaaccaaccacggagatctcatcggacggacaggggcaagacacgacacgac 133 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 680 tcctaaaccaaccacggagatctcatcggacggacaaggggaagacacgacacgac 625 Score = 165 bits (83), Expect = 1e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 215 ctagagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcc 274 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 550 ctagagctggccgcagtcggcgatgacgacttgcttggagcaggtgccgctgcgggagcc 491 Query: 275 caccttctcgatgttcttgacgacgtc 301 ||||||||||||||||||||||||||| Sbjct: 490 caccttctcgatgttcttgacgacgtc 464
>gb|AF262982.1|AF262982 Triticum aestivum cyclophilin A-1 (CyP1) mRNA, complete cds Length = 859 Score = 174 bits (88), Expect = 1e-40 Identities = 109/116 (93%) Strand = Plus / Minus Query: 18 ggaagataaccatggcggccggacgcagatccagcagcctaaagagtccacctaaaaccc 77 |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 784 ggaagataaccaaggcggccggacagagatccagcagcccaaagagtccacctaaaaccc 725 Query: 78 tcctaaaccaaccacggagatctcatcggacggacaggggcaagacacgacacgac 133 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 724 tcctaaaccaaccacggagatctcatcggacggaccaggggaagacacgacacgac 669 Score = 165 bits (83), Expect = 1e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 215 ctagagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcc 274 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 578 ctagagctggccgcagtcggcgatgaccacctgcttggagcaggtgccgctgcgggagcc 519 Query: 275 caccttctcgatgttcttgacgacgtc 301 ||||||||||||||||||||||||||| Sbjct: 518 caccttctcgatgttcttgacgacgtc 492
>gb|AY456123.1| Triticum aestivum cyclophilin A (CYP18-1) gene, partial cds Length = 519 Score = 174 bits (88), Expect = 1e-40 Identities = 109/116 (93%) Strand = Plus / Minus Query: 18 ggaagataaccatggcggccggacgcagatccagcagcctaaagagtccacctaaaaccc 77 |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 514 ggaagataaccaaggcggccggacagagatccagcagcccaaagagtccacctaaaaccc 455 Query: 78 tcctaaaccaaccacggagatctcatcggacggacaggggcaagacacgacacgac 133 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 454 tcctaaaccaaccacggagatctcatcggacggaccaggggaagacacgacacgac 399 Score = 165 bits (83), Expect = 1e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 215 ctagagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcc 274 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 308 ctagagctggccgcagtcggcgatgaccacctgcttggagcaggtgccgctgcgggagcc 249 Query: 275 caccttctcgatgttcttgacgacgtc 301 ||||||||||||||||||||||||||| Sbjct: 248 caccttctcgatgttcttgacgacgtc 222
>gb|AF262984.1|AF262984 Triticum aestivum cyclophilin A-3 (CyP3) mRNA, complete cds Length = 869 Score = 172 bits (87), Expect = 4e-40 Identities = 87/87 (100%) Strand = Plus / Minus Query: 215 ctagagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcc 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 586 ctagagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcc 527 Query: 275 caccttctcgatgttcttgacgacgtc 301 ||||||||||||||||||||||||||| Sbjct: 526 caccttctcgatgttcttgacgacgtc 500 Score = 168 bits (85), Expect = 6e-39 Identities = 106/113 (93%) Strand = Plus / Minus Query: 18 ggaagataaccatggcggccggacgcagatccagcagcctaaagagtccacctaaaaccc 77 |||||||||||| ||| |||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 780 ggaagataaccaaggccgccggacgcagatccagcggcccaaagagtccacctaaaaccc 721 Query: 78 tcctaaaccaaccacggagatctcatcggacggacaggggcaagacacgacac 130 ||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 720 tcctaaaccaaccacggagatctcatcggacggaccaggggaagacacgacac 668
>gb|AY456124.1| Triticum aestivum cyclophilin A (CYP18-3) gene, partial cds Length = 494 Score = 172 bits (87), Expect = 4e-40 Identities = 87/87 (100%) Strand = Plus / Minus Query: 215 ctagagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcc 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 ctagagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcc 248 Query: 275 caccttctcgatgttcttgacgacgtc 301 ||||||||||||||||||||||||||| Sbjct: 247 caccttctcgatgttcttgacgacgtc 221 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Minus Query: 25 aaccatggcggccggacgcagatccagcagcctaaagagtccacctaaaaccctcctaaa 84 ||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 494 aaccaaggccgccggacgcagatccagcggcccaaagagtccacctaaaaccctcctaaa 435 Query: 85 ccaaccacggagatctcatcggacggacaggggcaagacacgacac 130 |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 434 ccaaccacggagatctcatcggacggaccaggggaagacacgacac 389
>gb|AF384147.1|AF384147 Triticum aestivum cyclophilin mRNA, partial cds Length = 430 Score = 149 bits (75), Expect = 6e-33 Identities = 84/87 (96%) Strand = Plus / Minus Query: 215 ctagagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcc 274 |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 396 ctagagctggccgcagtcggcgatgacgacctgcttggcggtggtgccgctgcgggagcc 337 Query: 275 caccttctcgatgttcttgacgacgtc 301 ||||||||||||||||||||||||||| Sbjct: 336 caccttctcgatgttcttgacgacgtc 310
>ref|XM_463914.1| Oryza sativa (japonica cultivar-group), mRNA Length = 885 Score = 89.7 bits (45), Expect = 5e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 217 agagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagccca 276 ||||||||||||||||||||||||||||| |||||| | | | |||| |||||| |||| Sbjct: 607 agagctggccgcagtcggcgatgacgaccggcttggcggtgctcccgccgcgggatccca 548 Query: 277 ccttctcgatgttcttgacgacgtc 301 ||||||||||| |||||||||||| Sbjct: 547 ccttctcgatggccttgacgacgtc 523
>ref|XM_506694.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0088N06.23 mRNA Length = 887 Score = 89.7 bits (45), Expect = 5e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 217 agagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagccca 276 ||||||||||||||||||||||||||||| |||||| | | | |||| |||||| |||| Sbjct: 608 agagctggccgcagtcggcgatgacgaccggcttggcggtgctcccgccgcgggatccca 549 Query: 277 ccttctcgatgttcttgacgacgtc 301 ||||||||||| |||||||||||| Sbjct: 548 ccttctcgatggccttgacgacgtc 524
>gb|AF263543.1| Oryza sativa clone 15CAC microsatellite sequence Length = 435 Score = 89.7 bits (45), Expect = 5e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 217 agagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagccca 276 ||||||||||||||||||||||||||||| |||||| | | | |||| |||||| |||| Sbjct: 120 agagctggccgcagtcggcgatgacgaccggcttggcggtgctcccgccgcgggatccca 61 Query: 277 ccttctcgatgttcttgacgacgtc 301 ||||||||||| |||||||||||| Sbjct: 60 ccttctcgatggccttgacgacgtc 36
>gb|DQ480736.1| Oryza sativa (indica cultivar-group) cyclophilinA mRNA, complete cds Length = 588 Score = 89.7 bits (45), Expect = 5e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 217 agagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagccca 276 ||||||||||||||||||||||||||||| |||||| | | | |||| |||||| |||| Sbjct: 524 agagctggccgcagtcggcgatgacgaccggcttggcggtgctcccgccgcgggatccca 465 Query: 277 ccttctcgatgttcttgacgacgtc 301 ||||||||||| |||||||||||| Sbjct: 464 ccttctcgatggccttgacgacgtc 440
>dbj|AK061894.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G07, full insert sequence Length = 887 Score = 89.7 bits (45), Expect = 5e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 217 agagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagccca 276 ||||||||||||||||||||||||||||| |||||| | | | |||| |||||| |||| Sbjct: 608 agagctggccgcagtcggcgatgacgaccggcttggcggtgctcccgccgcgggatccca 549 Query: 277 ccttctcgatgttcttgacgacgtc 301 ||||||||||| |||||||||||| Sbjct: 548 ccttctcgatggccttgacgacgtc 524
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 5e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 217 agagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagccca 276 ||||||||||||||||||||||||||||| |||||| | | | |||| |||||| |||| Sbjct: 1116673 agagctggccgcagtcggcgatgacgaccggcttggcggtgctcccgccgcgggatccca 1116614 Query: 277 ccttctcgatgttcttgacgacgtc 301 ||||||||||| |||||||||||| Sbjct: 1116613 ccttctcgatggccttgacgacgtc 1116589
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 89.7 bits (45), Expect = 5e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 217 agagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagccca 276 ||||||||||||||||||||||||||||| |||||| | | | |||| |||||| |||| Sbjct: 69197 agagctggccgcagtcggcgatgacgaccggcttggcggtgctcccgccgcgggatccca 69138 Query: 277 ccttctcgatgttcttgacgacgtc 301 ||||||||||| |||||||||||| Sbjct: 69137 ccttctcgatggccttgacgacgtc 69113
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 89.7 bits (45), Expect = 5e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 217 agagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagccca 276 ||||||||||||||||||||||||||||| |||||| | | | |||| |||||| |||| Sbjct: 105381 agagctggccgcagtcggcgatgacgaccggcttggcggtgctcccgccgcgggatccca 105322 Query: 277 ccttctcgatgttcttgacgacgtc 301 ||||||||||| |||||||||||| Sbjct: 105321 ccttctcgatggccttgacgacgtc 105297
>dbj|AK098919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N03, full insert sequence Length = 885 Score = 89.7 bits (45), Expect = 5e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 217 agagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagccca 276 ||||||||||||||||||||||||||||| |||||| | | | |||| |||||| |||| Sbjct: 607 agagctggccgcagtcggcgatgacgaccggcttggcggtgctcccgccgcgggatccca 548 Query: 277 ccttctcgatgttcttgacgacgtc 301 ||||||||||| |||||||||||| Sbjct: 547 ccttctcgatggccttgacgacgtc 523
>gb|L29469.1|RICCYP2G Oryza sativa cyclophilin 2 (Cyp2) gene, complete cds Length = 2323 Score = 89.7 bits (45), Expect = 5e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 217 agagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagccca 276 ||||||||||||||||||||||||||||| |||||| | | | |||| |||||| |||| Sbjct: 1663 agagctggccgcagtcggcgatgacgaccggcttggcggtgctcccgccgcgggatccca 1604 Query: 277 ccttctcgatgttcttgacgacgtc 301 ||||||||||| |||||||||||| Sbjct: 1603 ccttctcgatggccttgacgacgtc 1579
>dbj|D29701.1|RICYK13 Oryza sativa mRNA, partial homologous to cyclophilin gene Length = 356 Score = 79.8 bits (40), Expect = 5e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 222 tggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcccaccttc 281 |||||||||||||||||||||||| |||||| | | | |||| |||||| ||||||||| Sbjct: 260 tggccgcagtcggcgatgacgaccggcttggcggtgctcccgccgcgggatcccaccttc 201 Query: 282 tcgatgttcttgacgacgtc 301 |||||| |||||||||||| Sbjct: 200 tcgatggccttgacgacgtc 181
>gb|L29470.1|RICCYP2R Oryza sativa cyclophilin 2 (Cyp2) mRNA, complete cds Length = 824 Score = 73.8 bits (37), Expect = 3e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 217 agagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagccca 276 ||||||||||||||||||||||||| || |||||| | | | |||| |||||| |||| Sbjct: 552 agagctggccgcagtcggcgatgaccacgggcttggcggtgctcccgccgcgggatccca 493 Query: 277 ccttctcgatgttcttgacgacgtc 301 ||||||||||| |||||||||||| Sbjct: 492 ccttctcgatggccttgacgacgtc 468
>gb|BT016413.1| Zea mays clone Contig246 mRNA sequence Length = 868 Score = 63.9 bits (32), Expect = 3e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 215 ctagagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcc 274 |||||||||||| ||||| |||| |||| ||||||| || ||||||||||||||| Sbjct: 564 ctagagctggccacagtcagcgaccttcacctccttggaggtggcgccgctgcgggagcc 505 Query: 275 caccttctcgatgttcttgacgac 298 ||||||||||||| ||||||||| Sbjct: 504 caccttctcgatggccttgacgac 481
>gb|BT017873.1| Zea mays clone EL01N0513A10.c mRNA sequence Length = 978 Score = 63.9 bits (32), Expect = 3e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 215 ctagagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcc 274 |||||||||||| ||||| |||| |||| ||||||| || ||||||||||||||| Sbjct: 680 ctagagctggccacagtcagcgaccttcacctccttggaggtggcgccgctgcgggagcc 621 Query: 275 caccttctcgatgttcttgacgac 298 ||||||||||||| ||||||||| Sbjct: 620 caccttctcgatggccttgacgac 597
>gb|AF263542.1| Oryza sativa clone 19CAC microsatellite sequence Length = 429 Score = 63.9 bits (32), Expect = 3e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 217 agagctggccgcagtcggcgatgacgacctgcttgg 252 ||||||||||||||||||||||||||||| |||||| Sbjct: 99 agagctggccgcagtcggcgatgacgaccggcttgg 64
>gb|AY109901.1| Zea mays CL2214_-5 mRNA sequence Length = 636 Score = 63.9 bits (32), Expect = 3e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 215 ctagagctggccgcagtcggcgatgacgacctgcttggagcaggtgccgctgcgggagcc 274 |||||||||||| ||||| |||| |||| ||||||| || ||||||||||||||| Sbjct: 371 ctagagctggccacagtcagcgaccttcacctccttggaggtggcgccgctgcgggagcc 312 Query: 275 caccttctcgatgttcttgacgac 298 ||||||||||||| ||||||||| Sbjct: 311 caccttctcgatggccttgacgac 288
>gb|BT016412.1| Zea mays clone Contig245 mRNA sequence Length = 858 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 260 gccgctgcgggagcccaccttctcgatgttcttgacgacgtc 301 |||| |||||| |||||||||||||||| |||||||||||| Sbjct: 534 gccgttgcgggtgcccaccttctcgatggccttgacgacgtc 493
>emb|X68678.1|ZMCYCL Z.mays gene for cyclophilin Length = 2598 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 260 gccgctgcgggagcccaccttctcgatgttcttgacgacgtc 301 |||| |||||| |||||||||||||||| |||||||||||| Sbjct: 1532 gccgttgcgggtgcccaccttctcgatggccttgacgacgtc 1491
>gb|M55021.1|MZECYP Zea mays cyclophilin (CyP) mRNA, complete cds Length = 792 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 260 gccgctgcgggagcccaccttctcgatgttcttgacgacgtc 301 |||| |||||| |||||||||||||||| |||||||||||| Sbjct: 495 gccgttgcgggtgcccaccttctcgatggccttgacgacgtc 454
>gb|AY391451.1| Danio rerio peptidylprolyl isomerase A (PPIA-1) mRNA, complete cds Length = 743 Score = 46.1 bits (23), Expect = 0.064 Identities = 29/31 (93%) Strand = Plus / Minus Query: 216 tagagctggccgcagtcggcgatgacgacct 246 |||||||||||||||| |||||| ||||||| Sbjct: 557 tagagctggccgcagttggcgatcacgacct 527
>ref|NM_199957.1| Danio rerio peptidylprolyl isomerase A, like (ppial), mRNA Length = 822 Score = 46.1 bits (23), Expect = 0.064 Identities = 29/31 (93%) Strand = Plus / Minus Query: 216 tagagctggccgcagtcggcgatgacgacct 246 |||||||||||||||| |||||| ||||||| Sbjct: 634 tagagctggccgcagttggcgatcacgacct 604
>gb|BC071370.1| Danio rerio peptidylprolyl isomerase A, like, mRNA (cDNA clone MGC:86688 IMAGE:6895545), complete cds Length = 784 Score = 46.1 bits (23), Expect = 0.064 Identities = 29/31 (93%) Strand = Plus / Minus Query: 216 tagagctggccgcagtcggcgatgacgacct 246 |||||||||||||||| |||||| ||||||| Sbjct: 566 tagagctggccgcagttggcgatcacgacct 536
>gb|U36797.1|HMU36797 Hirudo medicinalis cyclophilin-A mRNA (hcyp),complete cds Length = 617 Score = 46.1 bits (23), Expect = 0.064 Identities = 23/23 (100%) Strand = Plus / Minus Query: 216 tagagctggccgcagtcggcgat 238 ||||||||||||||||||||||| Sbjct: 482 tagagctggccgcagtcggcgat 460
>gb|BC059470.1| Danio rerio peptidylprolyl isomerase A, like, mRNA (cDNA clone MGC:73102 IMAGE:4786094), complete cds Length = 822 Score = 46.1 bits (23), Expect = 0.064 Identities = 29/31 (93%) Strand = Plus / Minus Query: 216 tagagctggccgcagtcggcgatgacgacct 246 |||||||||||||||| |||||| ||||||| Sbjct: 634 tagagctggccgcagttggcgatcacgacct 604
>gb|AY351891.1| Nothofagus cunninghamii clone ncutas20 microsatellite sequence Length = 778 Score = 42.1 bits (21), Expect = 1.00 Identities = 27/29 (93%) Strand = Plus / Minus Query: 273 cccaccttctcgatgttcttgacgacgtc 301 ||||||||||||||| |||||||||||| Sbjct: 92 cccaccttctcgatggccttgacgacgtc 64
>ref|NM_074348.4| Caenorhabditis elegans CYclophyliN family member (cyn-7) (cyn-7) mRNA, complete cds Length = 644 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 216 tagagctggccgcagtcggcgatga 240 |||||||| |||||||||||||||| Sbjct: 545 tagagctgtccgcagtcggcgatga 521
>emb|AL032663.1|CEY75B12B Caenorhabditis elegans YAC Y75B12B, complete sequence Length = 23906 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Plus Query: 216 tagagctggccgcagtcggcgatga 240 |||||||| |||||||||||||||| Sbjct: 3489 tagagctgtccgcagtcggcgatga 3513
>gb|U27559.1|CEU27559 Caenorhabditis elegans cyclophilin (cyp-7) mRNA, complete cds Length = 525 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 216 tagagctggccgcagtcggcgatga 240 |||||||| |||||||||||||||| Sbjct: 524 tagagctgtccgcagtcggcgatga 500
>emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chromosome 13, complete sequence Length = 183340 Score = 42.1 bits (21), Expect = 1.00 Identities = 27/29 (93%) Strand = Plus / Minus Query: 64 tccacctaaaaccctcctaaaccaaccac 92 ||||||| ||||| ||||||||||||||| Sbjct: 53760 tccacctgaaaccatcctaaaccaaccac 53732
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ggccgcagtcggcgatgacg 242 |||||||||||||||||||| Sbjct: 116807 ggccgcagtcggcgatgacg 116788
>emb|CR381643.18| Zebrafish DNA sequence from clone DKEY-39N1 in linkage group 8, complete sequence Length = 217745 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 gcgggagcccaccttctcgatgtt 289 |||||||||||||||| ||||||| Sbjct: 174848 gcgggagcccaccttcacgatgtt 174871 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,237,759 Number of Sequences: 3902068 Number of extensions: 1237759 Number of successful extensions: 23227 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 23159 Number of HSP's gapped (non-prelim): 56 length of query: 301 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 279 effective length of database: 17,147,199,772 effective search space: 4784068736388 effective search space used: 4784068736388 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)