ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63f03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY596574.1| Saccharum officinarum clone SCCCLR1072A04, comple... 78 3e-11
2ref|XM_450264.1| Oryza sativa (japonica cultivar-group), mRNA 74 4e-10
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
4dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
5dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
6dbj|AK103826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
7dbj|AK060788.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
8gb|AY109393.1| Zea mays CL6746_2 mRNA sequence 70 6e-09
9ref|XM_450265.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
10dbj|AK099919.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
11ref|XM_450263.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.006
12dbj|AK107545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
13emb|CR450800.9| Zebrafish DNA sequence from clone DKEY-83F4 in l... 42 1.5
14dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15ref|XM_705790.1| Candida albicans SC5314 putative transcription ... 40 5.8
16ref|XM_705781.1| Candida albicans SC5314 putative transcription ... 40 5.8
17emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 i... 40 5.8
18ref|XM_808720.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.8
19ref|XM_815199.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.8
20gb|AC005559.2|AC005559 Homo sapiens chromosome 19, cosmid F18382... 40 5.8
21ref|XM_392567.2| PREDICTED: Apis mellifera similar to CG32663-PA... 40 5.8
22gb|AC007256.5| Homo sapiens BAC clone RP11-575C6 from 2, complet... 40 5.8
23gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 5.8
24emb|AL672247.8| Mouse DNA sequence from clone RP23-95I19 on chro... 40 5.8

>gb|AY596574.1| Saccharum officinarum clone SCCCLR1072A04, complete sequence
          Length = 2198

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 141/167 (84%), Gaps = 11/167 (6%)
 Strand = Plus / Plus

                                                                       
Query: 54  ccaactattttcagctaggcaaactagctaga-tgactgatacaactacaacaacag-ca 111
           |||||||||| ||||||||||||||||| ||| | |||||||| ||||||||||| | ||
Sbjct: 122 ccaactatttccagctaggcaaactagc-agagtaactgatacgactacaacaacgggca 180

                                                                       
Query: 112 gaaggttaaaagctagggatagttaggaaagagcccatgcactttgtagctctcccccat 171
           | |||||||  |||||  |||||||||||||||| | ||||| | |  | |||||   ||
Sbjct: 181 gcaggttaa--gctag--atagttaggaaagagcacctgcacctggctg-tctcc---at 232

                                                          
Query: 172 tagtggatataaggcacctggtactgcaccgggtagccattaccgta 218
           ||||||||||| || ||||||||||| || |||||||||||||||||
Sbjct: 233 tagtggatatacgggacctggtactgaactgggtagccattaccgta 279



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 113/143 (79%), Gaps = 3/143 (2%)
 Strand = Plus / Plus

                                                                       
Query: 286 tcagcgccgtacacaaactgcctttcgtaagg---gtatgggtgcctctctggtgttgcc 342
           ||||| || |||||||||||||| ||||||||   | | || |||||||||||  || | 
Sbjct: 344 tcagcaccatacacaaactgcctctcgtaaggattggagggatgcctctctgggtttact 403

                                                                       
Query: 343 tggtagaagctcttctcggggaagctggtgacacggggtgcatagagcgacccgttggca 402
            ||||||||||||| || |  ||||  ||  ||||| ||||| ||  ||| || ||||||
Sbjct: 404 gggtagaagctcttgtcagcaaagcctgtagcacggtgtgcaaaggccgatccattggca 463

                                  
Query: 403 cgcggcctcttggactgtggctt 425
           || |||| |||||||||||||||
Sbjct: 464 cgaggccgcttggactgtggctt 486



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>ref|XM_450264.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2179

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 124/153 (81%)
 Strand = Plus / Minus

                                                                        
Query: 168  ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 227
            |||| |||||||||| || ||||||||||| ||| | ||||||||||| || || |  ||
Sbjct: 1854 ccatcagtggatatatggtacctggtactgaacctgatagccattaccataatatgttgt 1795

                                                                        
Query: 228  gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 287
            |||||  |||||||||   ||||||||   | ||||||| || || ||||| ||||| ||
Sbjct: 1794 gtgggcaggtgagatgccatagggagctgagcttatcattgtgggatggtgatgggcctc 1735

                                             
Query: 288  agcgccgtacacaaactgcctttcgtaagggta 320
            ||| || |||||| ||||||| |||||||||||
Sbjct: 1734 agcaccatacacatactgcctctcgtaagggta 1702



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 397  ttggcacgcggcctcttggactgtggctt 425
            |||||||| |||||||| |||||||||||
Sbjct: 1625 ttggcacgaggcctcttagactgtggctt 1597



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 124/153 (81%)
 Strand = Plus / Plus

                                                                           
Query: 168     ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 227
               |||| |||||||||| || ||||||||||| ||| | ||||||||||| || || |  ||
Sbjct: 3606541 ccatcagtggatatatggtacctggtactgaacctgatagccattaccataatatgttgt 3606600

                                                                           
Query: 228     gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 287
               |||||  |||||||||   ||||||||   | ||||||| || || ||||| ||||| ||
Sbjct: 3606601 gtgggcaggtgagatgccatagggagctgagcttatcattgtgggatggtgatgggcctc 3606660

                                                
Query: 288     agcgccgtacacaaactgcctttcgtaagggta 320
               ||| || |||||| ||||||| |||||||||||
Sbjct: 3606661 agcaccatacacatactgcctctcgtaagggta 3606693



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 123/153 (80%)
 Strand = Plus / Plus

                                                                           
Query: 168     ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 227
               |||| |||||||||| || ||||||||||| ||| | ||||||||||| ||||| |  ||
Sbjct: 3616095 ccatcagtggatatatggtacctggtactgaacctgatagccattaccatagtatgttgt 3616154

                                                                           
Query: 228     gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 287
               |||||  ||||| |||   ||||||||   | ||||||| || ||||| || ||||| ||
Sbjct: 3616155 gtgggcaggtgacatgccatagggagctgagcttatcattgttgggtgatgatgggcctc 3616214

                                                
Query: 288     agcgccgtacacaaactgcctttcgtaagggta 320
               ||| || || ||| ||||||| |||||||||||
Sbjct: 3616215 agcaccatatacatactgcctctcgtaagggta 3616247



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 62/72 (86%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                           
Query: 56      aactattttcagctaggcaaactagctagatgactgatacaactacaaca-acagcagaa 114
               ||||| |||||||||||||  ||||||||  || |||||||||||||||| | || || |
Sbjct: 3615992 aactaatttcagctaggcagtctagctagtggattgatacaactacaacacatagtagca 3616051

                           
Query: 115     ggttaaaagcta 126
               ||||||||||||
Sbjct: 3616052 ggttaaaagcta 3616063



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 394     ccgttggcacgcggcctcttggactgtggctt 425
               ||||||||||| |||||||| |||||||||||
Sbjct: 3616324 ccgttggcacgaggcctcttagactgtggctt 3616355



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 90       tgatacaactacaacaacagcagaa 114
                |||||||| ||||||||||||||||
Sbjct: 14480626 tgatacaagtacaacaacagcagaa 14480602



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 397     ttggcacgcggcctcttggactgtggctt 425
               |||||||| |||||||| |||||||||||
Sbjct: 3606770 ttggcacgaggcctcttagactgtggctt 3606798



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>dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0499G10
          Length = 158375

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 124/153 (81%)
 Strand = Plus / Plus

                                                                         
Query: 168   ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 227
             |||| |||||||||| || ||||||||||| ||| | ||||||||||| || || |  ||
Sbjct: 92316 ccatcagtggatatatggtacctggtactgaacctgatagccattaccataatatgttgt 92375

                                                                         
Query: 228   gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 287
             |||||  |||||||||   ||||||||   | ||||||| || || ||||| ||||| ||
Sbjct: 92376 gtgggcaggtgagatgccatagggagctgagcttatcattgtgggatggtgatgggcctc 92435

                                              
Query: 288   agcgccgtacacaaactgcctttcgtaagggta 320
             ||| || |||||| ||||||| |||||||||||
Sbjct: 92436 agcaccatacacatactgcctctcgtaagggta 92468



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 123/153 (80%)
 Strand = Plus / Plus

                                                                          
Query: 168    ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 227
              |||| |||||||||| || ||||||||||| ||| | ||||||||||| ||||| |  ||
Sbjct: 101870 ccatcagtggatatatggtacctggtactgaacctgatagccattaccatagtatgttgt 101929

                                                                          
Query: 228    gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 287
              |||||  ||||| |||   ||||||||   | ||||||| || ||||| || ||||| ||
Sbjct: 101930 gtgggcaggtgacatgccatagggagctgagcttatcattgttgggtgatgatgggcctc 101989

                                               
Query: 288    agcgccgtacacaaactgcctttcgtaagggta 320
              ||| || || ||| ||||||| |||||||||||
Sbjct: 101990 agcaccatatacatactgcctctcgtaagggta 102022



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 62/72 (86%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                          
Query: 56     aactattttcagctaggcaaactagctagatgactgatacaactacaaca-acagcagaa 114
              ||||| |||||||||||||  ||||||||  || |||||||||||||||| | || || |
Sbjct: 101767 aactaatttcagctaggcagtctagctagtggattgatacaactacaacacatagtagca 101826

                          
Query: 115    ggttaaaagcta 126
              ||||||||||||
Sbjct: 101827 ggttaaaagcta 101838



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 394    ccgttggcacgcggcctcttggactgtggctt 425
              ||||||||||| |||||||| |||||||||||
Sbjct: 102099 ccgttggcacgaggcctcttagactgtggctt 102130



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 397   ttggcacgcggcctcttggactgtggctt 425
             |||||||| |||||||| |||||||||||
Sbjct: 92545 ttggcacgaggcctcttagactgtggctt 92573



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>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1695_A02
          Length = 156214

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 124/153 (81%)
 Strand = Plus / Plus

                                                                         
Query: 168   ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 227
             |||| |||||||||| || ||||||||||| ||| | ||||||||||| || || |  ||
Sbjct: 14802 ccatcagtggatatatggtacctggtactgaacctgatagccattaccataatatgttgt 14861

                                                                         
Query: 228   gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 287
             |||||  |||||||||   ||||||||   | ||||||| || || ||||| ||||| ||
Sbjct: 14862 gtgggcaggtgagatgccatagggagctgagcttatcattgtgggatggtgatgggcctc 14921

                                              
Query: 288   agcgccgtacacaaactgcctttcgtaagggta 320
             ||| || |||||| ||||||| |||||||||||
Sbjct: 14922 agcaccatacacatactgcctctcgtaagggta 14954



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 123/153 (80%)
 Strand = Plus / Plus

                                                                         
Query: 168   ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 227
             |||| |||||||||| || ||||||||||| ||| | ||||||||||| ||||| |  ||
Sbjct: 24356 ccatcagtggatatatggtacctggtactgaacctgatagccattaccatagtatgttgt 24415

                                                                         
Query: 228   gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 287
             |||||  ||||| |||   ||||||||   | ||||||| || ||||| || ||||| ||
Sbjct: 24416 gtgggcaggtgacatgccatagggagctgagcttatcattgttgggtgatgatgggcctc 24475

                                              
Query: 288   agcgccgtacacaaactgcctttcgtaagggta 320
             ||| || || ||| ||||||| |||||||||||
Sbjct: 24476 agcaccatatacatactgcctctcgtaagggta 24508



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 62/72 (86%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                         
Query: 56    aactattttcagctaggcaaactagctagatgactgatacaactacaaca-acagcagaa 114
             ||||| |||||||||||||  ||||||||  || |||||||||||||||| | || || |
Sbjct: 24253 aactaatttcagctaggcagtctagctagtggattgatacaactacaacacatagtagca 24312

                         
Query: 115   ggttaaaagcta 126
             ||||||||||||
Sbjct: 24313 ggttaaaagcta 24324



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 394   ccgttggcacgcggcctcttggactgtggctt 425
             ||||||||||| |||||||| |||||||||||
Sbjct: 24585 ccgttggcacgaggcctcttagactgtggctt 24616



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 397   ttggcacgcggcctcttggactgtggctt 425
             |||||||| |||||||| |||||||||||
Sbjct: 15031 ttggcacgaggcctcttagactgtggctt 15059



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>dbj|AK103826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147L19, full
            insert sequence
          Length = 2179

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 124/153 (81%)
 Strand = Plus / Minus

                                                                        
Query: 168  ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 227
            |||| |||||||||| || ||||||||||| ||| | ||||||||||| || || |  ||
Sbjct: 1854 ccatcagtggatatatggtacctggtactgaacctgatagccattaccataatatgttgt 1795

                                                                        
Query: 228  gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 287
            |||||  |||||||||   ||||||||   | ||||||| || || ||||| ||||| ||
Sbjct: 1794 gtgggcaggtgagatgccatagggagctgagcttatcattgtgggatggtgatgggcctc 1735

                                             
Query: 288  agcgccgtacacaaactgcctttcgtaagggta 320
            ||| || |||||| ||||||| |||||||||||
Sbjct: 1734 agcaccatacacatactgcctctcgtaagggta 1702



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 397  ttggcacgcggcctcttggactgtggctt 425
            |||||||| |||||||| |||||||||||
Sbjct: 1625 ttggcacgaggcctcttagactgtggctt 1597



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>dbj|AK060788.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-D08, full
            insert sequence
          Length = 1325

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 124/153 (81%)
 Strand = Plus / Minus

                                                                        
Query: 168  ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 227
            |||| |||||||||| || ||||||||||| ||| | ||||||||||| || || |  ||
Sbjct: 1085 ccatcagtggatatatggtacctggtactgaacctgatagccattaccataatatgttgt 1026

                                                                        
Query: 228  gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 287
            |||||  |||||||||   ||||||||   | ||||||| || || ||||| ||||| ||
Sbjct: 1025 gtgggcaggtgagatgccatagggagctgagcttatcattgtgggatggtgatgggcctc 966

                                             
Query: 288  agcgccgtacacaaactgcctttcgtaagggta 320
            ||| || |||||| ||||||| |||||||||||
Sbjct: 965  agcaccatacacatactgcctctcgtaagggta 933



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 397 ttggcacgcggcctcttggactgtggctt 425
           |||||||| |||||||| |||||||||||
Sbjct: 856 ttggcacgaggcctcttagactgtggctt 828



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>gb|AY109393.1| Zea mays CL6746_2 mRNA sequence
          Length = 2069

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 168  ccattagtggatataaggcacctggtactgcaccgggtagccattaccgta 218
            ||||||||||||||| || ||||||||||| || |||||||||||||||||
Sbjct: 1798 ccattagtggatatacgggacctggtactgaactgggtagccattaccgta 1748



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 115/143 (80%), Gaps = 3/143 (2%)
 Strand = Plus / Minus

                                                                        
Query: 286  tcagcgccgtacacaaactgcctttcgtaagg---gtatgggtgcctctctggtgttgcc 342
            |||||||| |||||||||||||| ||| ||||   | |||| ||||||||||| ||||| 
Sbjct: 1683 tcagcgccatacacaaactgcctctcgcaaggattgaatggatgcctctctggggttgct 1624

                                                                        
Query: 343  tggtagaagctcttctcggggaagctggtgacacggggtgcatagagcgacccgttggca 402
              |||||||||||| || |  ||||  ||  |||||| |||| ||  ||| || ||||||
Sbjct: 1623 gagtagaagctcttgtcagcaaagcctgtagcacgggttgcaaaggccgatccattggca 1564

                                   
Query: 403  cgcggcctcttggactgtggctt 425
            || |||||||||||||| |||||
Sbjct: 1563 cgaggcctcttggactgcggctt 1541



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 54   ccaactattttcagctaggcaaactagc 81
            |||||||||| || ||||||||||||||
Sbjct: 1905 ccaactatttccatctaggcaaactagc 1878



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>ref|XM_450265.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2019

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 123/153 (80%)
 Strand = Plus / Minus

                                                                        
Query: 168  ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 227
            |||| |||||||||| || ||||||||||| ||| | ||||||||||| ||||| |  ||
Sbjct: 1783 ccatcagtggatatatggtacctggtactgaacctgatagccattaccatagtatgttgt 1724

                                                                        
Query: 228  gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 287
            |||||  ||||| |||   ||||||||   | ||||||| || ||||| || ||||| ||
Sbjct: 1723 gtgggcaggtgacatgccatagggagctgagcttatcattgttgggtgatgatgggcctc 1664

                                             
Query: 288  agcgccgtacacaaactgcctttcgtaagggta 320
            ||| || || ||| ||||||| |||||||||||
Sbjct: 1663 agcaccatatacatactgcctctcgtaagggta 1631



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 62/72 (86%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                        
Query: 56   aactattttcagctaggcaaactagctagatgactgatacaactacaaca-acagcagaa 114
            ||||| |||||||||||||  ||||||||  || |||||||||||||||| | || || |
Sbjct: 1886 aactaatttcagctaggcagtctagctagtggattgatacaactacaacacatagtagca 1827

                        
Query: 115  ggttaaaagcta 126
            ||||||||||||
Sbjct: 1826 ggttaaaagcta 1815



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 394  ccgttggcacgcggcctcttggactgtggctt 425
            ||||||||||| |||||||| |||||||||||
Sbjct: 1554 ccgttggcacgaggcctcttagactgtggctt 1523



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>dbj|AK099919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116K21, full
            insert sequence
          Length = 2019

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 123/153 (80%)
 Strand = Plus / Minus

                                                                        
Query: 168  ccattagtggatataaggcacctggtactgcaccgggtagccattaccgtagtacggcgt 227
            |||| |||||||||| || ||||||||||| ||| | ||||||||||| ||||| |  ||
Sbjct: 1783 ccatcagtggatatatggtacctggtactgaacctgatagccattaccatagtatgttgt 1724

                                                                        
Query: 228  gtgggtgggtgagatggtgtagggagcaccgtttatcatcgtagggtggtggtgggcttc 287
            |||||  ||||| |||   ||||||||   | ||||||| || ||||| || ||||| ||
Sbjct: 1723 gtgggcaggtgacatgccatagggagctgagcttatcattgttgggtgatgatgggcctc 1664

                                             
Query: 288  agcgccgtacacaaactgcctttcgtaagggta 320
            ||| || || ||| ||||||| |||||||||||
Sbjct: 1663 agcaccatatacatactgcctctcgtaagggta 1631



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 62/72 (86%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                        
Query: 56   aactattttcagctaggcaaactagctagatgactgatacaactacaaca-acagcagaa 114
            ||||| |||||||||||||  ||||||||  || |||||||||||||||| | || || |
Sbjct: 1886 aactaatttcagctaggcagtctagctagtggattgatacaactacaacacatagtagca 1827

                        
Query: 115  ggttaaaagcta 126
            ||||||||||||
Sbjct: 1826 ggttaaaagcta 1815



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 394  ccgttggcacgcggcctcttggactgtggctt 425
            ||||||||||| |||||||| |||||||||||
Sbjct: 1554 ccgttggcacgaggcctcttagactgtggctt 1523



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>ref|XM_450263.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2132

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 260  ttatcatcgtagggtggtggtgggcttcagcgccgtacacaaactgcctttcgtaagggt 319
            ||||||| || || ||||| ||||| ||||| || |||||| ||||||| ||||||||||
Sbjct: 1738 ttatcattgtgggatggtgatgggcctcagcaccatacacatactgcctctcgtaagggt 1679

             
Query: 320  a 320
            |
Sbjct: 1678 a 1678



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 397  ttggcacgcggcctcttggactgtggctt 425
            |||||||| |||||||| |||||||||||
Sbjct: 1601 ttggcacgaggcctcttagactgtggctt 1573



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>dbj|AK107545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-A02, full
            insert sequence
          Length = 2131

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 260  ttatcatcgtagggtggtggtgggcttcagcgccgtacacaaactgcctttcgtaagggt 319
            ||||||| || || ||||| ||||| ||||| || |||||| ||||||| ||||||||||
Sbjct: 1737 ttatcattgtgggatggtgatgggcctcagcaccatacacatactgcctctcgtaagggt 1678

             
Query: 320  a 320
            |
Sbjct: 1677 a 1677



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 397  ttggcacgcggcctcttggactgtggctt 425
            |||||||| |||||||| |||||||||||
Sbjct: 1600 ttggcacgaggcctcttagactgtggctt 1572



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>emb|CR450800.9| Zebrafish DNA sequence from clone DKEY-83F4 in linkage group 8,
             complete sequence
          Length = 120875

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 88    actgatacaactacaacaaca 108
             |||||||||||||||||||||
Sbjct: 92554 actgatacaactacaacaaca 92534



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 85    atgactgatacaactacaacaaca 108
             ||||||||||| ||||||||||||
Sbjct: 92701 atgactgatactactacaacaaca 92678



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 85    atgactgatacaactacaacaaca 108
             ||||||||||| ||||||||||||
Sbjct: 92641 atgactgatactactacaacaaca 92618



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>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 90    tgatacaactacaacaacagcagaa 114
             |||||||| ||||||||||||||||
Sbjct: 80191 tgatacaagtacaacaacagcagaa 80167



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>ref|XM_705790.1| Candida albicans SC5314 putative transcription factor (CaO19.9381),
           mRNA
          Length = 2523

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 93  tacaactacaacaacagcag 112
           ||||||||||||||||||||
Sbjct: 173 tacaactacaacaacagcag 192



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>ref|XM_705781.1| Candida albicans SC5314 putative transcription factor (CaO19.1822),
           mRNA
          Length = 2532

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 93  tacaactacaacaacagcag 112
           ||||||||||||||||||||
Sbjct: 173 tacaactacaacaacagcag 192



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>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11,
             complete sequence
          Length = 198600

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    acaactacaacaacagcaga 113
             ||||||||||||||||||||
Sbjct: 31792 acaactacaacaacagcaga 31811



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>ref|XM_808720.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506445.20) partial mRNA
          Length = 3042

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   tacaactacaacaacagcag 112
            ||||||||||||||||||||
Sbjct: 1559 tacaactacaacaacagcag 1578



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>ref|XM_815199.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508277.340) partial mRNA
          Length = 3054

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   tacaactacaacaacagcag 112
            ||||||||||||||||||||
Sbjct: 1568 tacaactacaacaacagcag 1587



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>gb|AC005559.2|AC005559 Homo sapiens chromosome 19, cosmid F18382 (LLNLF-140D2) and 3'
             overlapping restriction fragment, complete sequence
          Length = 38911

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 223   ggcgtgtgggtgggtgagatggtg 246
             ||||||||||||| ||||||||||
Sbjct: 23400 ggcgtgtgggtggatgagatggtg 23377



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>ref|XM_392567.2| PREDICTED: Apis mellifera similar to CG32663-PA (LOC409039), mRNA
          Length = 2914

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  tgactgatacaactacaaca 105
           ||||||||||||||||||||
Sbjct: 205 tgactgatacaactacaaca 186



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>gb|AC007256.5| Homo sapiens BAC clone RP11-575C6 from 2, complete sequence
          Length = 181150

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   aacaacagcagaaggttaaa 121
             ||||||||||||||||||||
Sbjct: 66006 aacaacagcagaaggttaaa 65987



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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    cctggtactgcaccgggtag 207
              ||||||||||||||||||||
Sbjct: 344918 cctggtactgcaccgggtag 344937



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>emb|AL672247.8| Mouse DNA sequence from clone RP23-95I19 on chromosome X, complete
              sequence
          Length = 224241

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    agctcttctcggggaagctg 369
              ||||||||||||||||||||
Sbjct: 173686 agctcttctcggggaagctg 173667


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,904,052
Number of Sequences: 3902068
Number of extensions: 12904052
Number of successful extensions: 79215
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79051
Number of HSP's gapped (non-prelim): 144
length of query: 431
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 409
effective length of database: 17,147,199,772
effective search space: 7013204706748
effective search space used: 7013204706748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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