ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_474331.1| Oryza sativa (japonica cultivar-group), predic... 240 5e-60
2dbj|AK111982.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 5e-60
3dbj|AK101752.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 5e-60
4emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4,... 180 4e-42
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 180 4e-42
6emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 180 4e-42
7dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 44 0.54
8gb|AC099624.6| Mus musculus chromosome 15, clone RP24-404E2, com... 42 2.1
9ref|XM_426034.1| PREDICTED: Gallus gallus similar to malin (LOC4... 42 2.1
10gb|AC127591.4| Mus musculus BAC clone RP23-315I14 from chromosom... 42 2.1
11emb|BX640408.8| Zebrafish DNA sequence from clone CH211-262L3 in... 42 2.1
12gb|AC147845.3| Saimiri boliviensis boliviensis clone CH254-335K1... 42 2.1
13gb|AC158464.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 42 2.1
14gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete se... 40 8.4
15gb|BT025191.1| Drosophila melanogaster FI01302 full insert cDNA 40 8.4
16emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome 40 8.4
17emb|Z50109.1|CEC09H10 Caenorhabditis elegans Cosmid C09H10, comp... 40 8.4
18emb|AL358214.10| Human DNA sequence from clone RP11-675O23 on ch... 40 8.4
19emb|AL669852.6| Mouse DNA sequence from clone RP23-339F11 on chr... 40 8.4
20ref|NM_143722.2| Drosophila melanogaster ENL/AF9-related CG4913-... 40 8.4
21gb|AC027506.12| Homo sapiens chromosome 18, clone RP11-762J3, co... 40 8.4
22gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, r... 40 8.4
23gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, r... 40 8.4
24emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 8.4
25emb|BX640579.10| Zebrafish DNA sequence from clone CH211-266K5 i... 40 8.4
26emb|CR962125.2| Medicago truncatula chromosome 5 clone mth2-179a... 40 8.4
27gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46... 40 8.4
28gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77... 40 8.4
29gb|BT001257.1| Drosophila melanogaster AT01735 full insert cDNA 40 8.4
30gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s... 40 8.4
31dbj|AP006674.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 8.4

>ref|XM_474331.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 14001

 Score =  240 bits (121), Expect = 5e-60
 Identities = 306/369 (82%)
 Strand = Plus / Minus

                                                                         
Query: 243   ggcctgaatatcttcatcattttggacacttgggtccggcaaaatgggcatngcgacacc 302
             ||||||||||| ||||||||  | || ||||| ||||| |||||||||||| | || |||
Sbjct: 13997 ggcctgaatattttcatcatcctagatacttgcgtccgacaaaatgggcatcgtgaaacc 13938

                                                                         
Query: 303   gagctcgagcacctgttgcacaggacgtggccgcacggtacgatggtcatgttcacctcg 362
             || || ||||| |  || || || || || ||||| ||||  || |||||||| ||||| 
Sbjct: 13937 gaacttgagcatcgattacaaagaacatgaccgcatggtattatagtcatgttgacctcc 13878

                                                                         
Query: 363   gagttcaggcagacgcggcatgaccatgccgccttggctatgtcggcttctttcaccgct 422
             |  ||||||||||| || ||||||||||| | |||||| |  || |||||| | || |||
Sbjct: 13877 gcattcaggcagacacgacatgaccatgctgacttggcaacatcagcttctctaactgct 13818

                                                                         
Query: 423   gactcggctttctcctgctccaccaagagagccacttgagattctttaagctggtcttgc 482
             | ||| ||||||||||||||||| |  |||||||||||||||||||||||||||||||||
Sbjct: 13817 gcctccgctttctcctgctccacgagtagagccacttgagattctttaagctggtcttgc 13758

                                                                         
Query: 483   aaggaaagggtagtctgtagcagngtttccttctcagcatccatccttacccctgctgcc 542
             |||||||| ||||||||||| || ||||||||   ||||||||||||||||||||| || 
Sbjct: 13757 aaggaaagagtagtctgtagaagcgtttcctttgtagcatccatccttacccctgcagct 13698

                                                                         
Query: 543   gaaagcatatcatggactgcttgtaccanctccgnggaagatactttgccgtattcaagc 602
             ||||||||||| |||||||| ||||||| ||| |  |||||||| || || |||||||| 
Sbjct: 13697 gaaagcatatcgtggactgcctgtaccagctcggttgaagataccttcccatattcaagg 13638

                      
Query: 603   ccagcagcc 611
             |||| ||||
Sbjct: 13637 ccagtagcc 13629



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>dbj|AK111982.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E09, full
           insert sequence
          Length = 730

 Score =  240 bits (121), Expect = 5e-60
 Identities = 306/369 (82%)
 Strand = Plus / Minus

                                                                       
Query: 243 ggcctgaatatcttcatcattttggacacttgggtccggcaaaatgggcatngcgacacc 302
           ||||||||||| ||||||||  | || ||||| ||||| |||||||||||| | || |||
Sbjct: 607 ggcctgaatattttcatcatcctagatacttgcgtccgacaaaatgggcatcgtgaaacc 548

                                                                       
Query: 303 gagctcgagcacctgttgcacaggacgtggccgcacggtacgatggtcatgttcacctcg 362
           || || ||||| |  || || || || || ||||| ||||  || |||||||| ||||| 
Sbjct: 547 gaacttgagcatcgattacaaagaacatgaccgcatggtattatagtcatgttgacctcc 488

                                                                       
Query: 363 gagttcaggcagacgcggcatgaccatgccgccttggctatgtcggcttctttcaccgct 422
           |  ||||||||||| || ||||||||||| | |||||| |  || |||||| | || |||
Sbjct: 487 gcattcaggcagacacgacatgaccatgctgacttggcaacatcagcttctctaactgct 428

                                                                       
Query: 423 gactcggctttctcctgctccaccaagagagccacttgagattctttaagctggtcttgc 482
           | ||| ||||||||||||||||| |  |||||||||||||||||||||||||||||||||
Sbjct: 427 gcctccgctttctcctgctccacgagtagagccacttgagattctttaagctggtcttgc 368

                                                                       
Query: 483 aaggaaagggtagtctgtagcagngtttccttctcagcatccatccttacccctgctgcc 542
           |||||||| ||||||||||| || ||||||||   ||||||||||||||||||||| || 
Sbjct: 367 aaggaaagagtagtctgtagaagcgtttcctttgtagcatccatccttacccctgcagct 308

                                                                       
Query: 543 gaaagcatatcatggactgcttgtaccanctccgnggaagatactttgccgtattcaagc 602
           ||||||||||| |||||||| ||||||| ||| |  |||||||| || || |||||||| 
Sbjct: 307 gaaagcatatcgtggactgcctgtaccagctcggttgaagataccttcccatattcaagg 248

                    
Query: 603 ccagcagcc 611
           |||| ||||
Sbjct: 247 ccagtagcc 239



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>dbj|AK101752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063D14, full
           insert sequence
          Length = 1045

 Score =  240 bits (121), Expect = 5e-60
 Identities = 306/369 (82%)
 Strand = Plus / Minus

                                                                       
Query: 243 ggcctgaatatcttcatcattttggacacttgggtccggcaaaatgggcatngcgacacc 302
           ||||||||||| ||||||||  | || ||||| ||||| |||||||||||| | || |||
Sbjct: 886 ggcctgaatattttcatcatcctagatacttgcgtccgacaaaatgggcatcgtgaaacc 827

                                                                       
Query: 303 gagctcgagcacctgttgcacaggacgtggccgcacggtacgatggtcatgttcacctcg 362
           || || ||||| |  || || || || || ||||| ||||  || |||||||| ||||| 
Sbjct: 826 gaacttgagcatcgattacaaagaacatgaccgcatggtattatagtcatgttgacctcc 767

                                                                       
Query: 363 gagttcaggcagacgcggcatgaccatgccgccttggctatgtcggcttctttcaccgct 422
           |  ||||||||||| || ||||||||||| | |||||| |  || |||||| | || |||
Sbjct: 766 gcattcaggcagacacgacatgaccatgctgacttggcaacatcagcttctctaactgct 707

                                                                       
Query: 423 gactcggctttctcctgctccaccaagagagccacttgagattctttaagctggtcttgc 482
           | ||| ||||||||||||||||| |  |||||||||||||||||||||||||||||||||
Sbjct: 706 gcctccgctttctcctgctccacgagtagagccacttgagattctttaagctggtcttgc 647

                                                                       
Query: 483 aaggaaagggtagtctgtagcagngtttccttctcagcatccatccttacccctgctgcc 542
           |||||||| ||||||||||| || ||||||||   ||||||||||||||||||||| || 
Sbjct: 646 aaggaaagagtagtctgtagaagcgtttcctttgtagcatccatccttacccctgcagct 587

                                                                       
Query: 543 gaaagcatatcatggactgcttgtaccanctccgnggaagatactttgccgtattcaagc 602
           ||||||||||| |||||||| ||||||| ||| |  |||||||| || || |||||||| 
Sbjct: 586 gaaagcatatcgtggactgcctgtaccagctcggttgaagataccttcccatattcaagg 527

                    
Query: 603 ccagcagcc 611
           |||| ||||
Sbjct: 526 ccagtagcc 518



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>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05,
              complete sequence
          Length = 164943

 Score =  180 bits (91), Expect = 4e-42
 Identities = 154/176 (87%)
 Strand = Plus / Minus

                                                                          
Query: 436    cctgctccaccaagagagccacttgagattctttaagctggtcttgcaaggaaagggtag 495
              |||||||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 139853 cctgctccacgagtagagccacttgagattctttaagctggtcttgcaaggaaagagtag 139794

                                                                          
Query: 496    tctgtagcagngtttccttctcagcatccatccttacccctgctgccgaaagcatatcat 555
              ||||||| || ||||||||   ||||||||||||||||||||| || ||||||||||| |
Sbjct: 139793 tctgtagaagcgtttcctttgtagcatccatccttacccctgcagctgaaagcatatcgt 139734

                                                                      
Query: 556    ggactgcttgtaccanctccgnggaagatactttgccgtattcaagcccagcagcc 611
              ||||||| ||||||| ||| |  |||||||| || || |||||||| |||| ||||
Sbjct: 139733 ggactgcctgtaccagctcggttgaagataccttcccatattcaaggccagtagcc 139678



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 156/197 (79%)
 Strand = Plus / Minus

                                                                          
Query: 243    ggcctgaatatcttcatcattttggacacttgggtccggcaaaatgggcatngcgacacc 302
              ||||||||||| ||||||||  | || ||||| ||||| |||||||||||| | || |||
Sbjct: 140510 ggcctgaatattttcatcatcctagatacttgcgtccgacaaaatgggcatcgtgaaacc 140451

                                                                          
Query: 303    gagctcgagcacctgttgcacaggacgtggccgcacggtacgatggtcatgttcacctcg 362
              || || ||||| |  || || || || || ||||| ||||  || |||||||| ||||| 
Sbjct: 140450 gaacttgagcatcgattacaaagaacatgaccgcatggtattatagtcatgttgacctcc 140391

                                                                          
Query: 363    gagttcaggcagacgcggcatgaccatgccgccttggctatgtcggcttctttcaccgct 422
              |  ||||||||||| || ||||||||||| | |||||| |  || |||||| | || |||
Sbjct: 140390 gcattcaggcagacacgacatgaccatgctgacttggcaacatcagcttctctaactgct 140331

                               
Query: 423    gactcggctttctcctg 439
              | ||| |||||||||||
Sbjct: 140330 gcctccgctttctcctg 140314



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  180 bits (91), Expect = 4e-42
 Identities = 154/176 (87%)
 Strand = Plus / Minus

                                                                            
Query: 436      cctgctccaccaagagagccacttgagattctttaagctggtcttgcaaggaaagggtag 495
                |||||||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 34522369 cctgctccacgagtagagccacttgagattctttaagctggtcttgcaaggaaagagtag 34522310

                                                                            
Query: 496      tctgtagcagngtttccttctcagcatccatccttacccctgctgccgaaagcatatcat 555
                ||||||| || ||||||||   ||||||||||||||||||||| || ||||||||||| |
Sbjct: 34522309 tctgtagaagcgtttcctttgtagcatccatccttacccctgcagctgaaagcatatcgt 34522250

                                                                        
Query: 556      ggactgcttgtaccanctccgnggaagatactttgccgtattcaagcccagcagcc 611
                ||||||| ||||||| ||| |  |||||||| || || |||||||| |||| ||||
Sbjct: 34522249 ggactgcctgtaccagctcggttgaagataccttcccatattcaaggccagtagcc 34522194



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 156/197 (79%)
 Strand = Plus / Minus

                                                                            
Query: 243      ggcctgaatatcttcatcattttggacacttgggtccggcaaaatgggcatngcgacacc 302
                ||||||||||| ||||||||  | || ||||| ||||| |||||||||||| | || |||
Sbjct: 34523026 ggcctgaatattttcatcatcctagatacttgcgtccgacaaaatgggcatcgtgaaacc 34522967

                                                                            
Query: 303      gagctcgagcacctgttgcacaggacgtggccgcacggtacgatggtcatgttcacctcg 362
                || || ||||| |  || || || || || ||||| ||||  || |||||||| ||||| 
Sbjct: 34522966 gaacttgagcatcgattacaaagaacatgaccgcatggtattatagtcatgttgacctcc 34522907

                                                                            
Query: 363      gagttcaggcagacgcggcatgaccatgccgccttggctatgtcggcttctttcaccgct 422
                |  ||||||||||| || ||||||||||| | |||||| |  || |||||| | || |||
Sbjct: 34522906 gcattcaggcagacacgacatgaccatgctgacttggcaacatcagcttctctaactgct 34522847

                                 
Query: 423      gactcggctttctcctg 439
                | ||| |||||||||||
Sbjct: 34522846 gcctccgctttctcctg 34522830



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>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete
             sequence
          Length = 104146

 Score =  180 bits (91), Expect = 4e-42
 Identities = 154/176 (87%)
 Strand = Plus / Minus

                                                                         
Query: 436   cctgctccaccaagagagccacttgagattctttaagctggtcttgcaaggaaagggtag 495
             |||||||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 58486 cctgctccacgagtagagccacttgagattctttaagctggtcttgcaaggaaagagtag 58427

                                                                         
Query: 496   tctgtagcagngtttccttctcagcatccatccttacccctgctgccgaaagcatatcat 555
             ||||||| || ||||||||   ||||||||||||||||||||| || ||||||||||| |
Sbjct: 58426 tctgtagaagcgtttcctttgtagcatccatccttacccctgcagctgaaagcatatcgt 58367

                                                                     
Query: 556   ggactgcttgtaccanctccgnggaagatactttgccgtattcaagcccagcagcc 611
             ||||||| ||||||| ||| |  |||||||| || || |||||||| |||| ||||
Sbjct: 58366 ggactgcctgtaccagctcggttgaagataccttcccatattcaaggccagtagcc 58311



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 156/197 (79%)
 Strand = Plus / Minus

                                                                         
Query: 243   ggcctgaatatcttcatcattttggacacttgggtccggcaaaatgggcatngcgacacc 302
             ||||||||||| ||||||||  | || ||||| ||||| |||||||||||| | || |||
Sbjct: 59143 ggcctgaatattttcatcatcctagatacttgcgtccgacaaaatgggcatcgtgaaacc 59084

                                                                         
Query: 303   gagctcgagcacctgttgcacaggacgtggccgcacggtacgatggtcatgttcacctcg 362
             || || ||||| |  || || || || || ||||| ||||  || |||||||| ||||| 
Sbjct: 59083 gaacttgagcatcgattacaaagaacatgaccgcatggtattatagtcatgttgacctcc 59024

                                                                         
Query: 363   gagttcaggcagacgcggcatgaccatgccgccttggctatgtcggcttctttcaccgct 422
             |  ||||||||||| || ||||||||||| | |||||| |  || |||||| | || |||
Sbjct: 59023 gcattcaggcagacacgacatgaccatgctgacttggcaacatcagcttctctaactgct 58964

                              
Query: 423   gactcggctttctcctg 439
             | ||| |||||||||||
Sbjct: 58963 gcctccgctttctcctg 58947



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 296     cgacaccgagctcgagcacctg 317
               ||||||||||||||||||||||
Sbjct: 5018006 cgacaccgagctcgagcacctg 5018027



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>gb|AC099624.6| Mus musculus chromosome 15, clone RP24-404E2, complete sequence
          Length = 173877

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   tgtgctgtacatggactggac 149
             |||||||||||||||||||||
Sbjct: 70652 tgtgctgtacatggactggac 70672



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>ref|XM_426034.1| PREDICTED: Gallus gallus similar to malin (LOC428477), mRNA
          Length = 2043

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 320 gcacaggacgtggccgcacgg 340
           |||||||||||||||||||||
Sbjct: 210 gcacaggacgtggccgcacgg 190



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>gb|AC127591.4| Mus musculus BAC clone RP23-315I14 from chromosome 15, complete sequence
          Length = 182619

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 129    tgtgctgtacatggactggac 149
              |||||||||||||||||||||
Sbjct: 132869 tgtgctgtacatggactggac 132849



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>emb|BX640408.8| Zebrafish DNA sequence from clone CH211-262L3 in linkage group 2,
             complete sequence
          Length = 123471

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 98    aaactaaactagaatgcgctg 118
             |||||||||||||||||||||
Sbjct: 36682 aaactaaactagaatgcgctg 36662



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>gb|AC147845.3| Saimiri boliviensis boliviensis clone CH254-335K11, complete sequence
          Length = 222317

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 450  agagccacttgagattcttta 470
            |||||||||||||||||||||
Sbjct: 2338 agagccacttgagattcttta 2358



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>gb|AC158464.2| Medicago truncatula chromosome 2 BAC clone mth2-145m24, complete
             sequence
          Length = 89051

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 247   tgaatatcttcatcattttggacacttgg 275
             |||| |||||||||| |||||||||||||
Sbjct: 57716 tgaacatcttcatcagtttggacacttgg 57688



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>gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence
          Length = 398525

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     ctaaaactaaactagaatgc 114
              ||||||||||||||||||||
Sbjct: 299450 ctaaaactaaactagaatgc 299431



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>gb|BT025191.1| Drosophila melanogaster FI01302 full insert cDNA
          Length = 3009

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 216  ccggtgcccctccctcggtg 235
            ||||||||||||||||||||
Sbjct: 1814 ccggtgcccctccctcggtg 1795



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>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome
          Length = 1395502

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 483     aaggaaagggtagtctgtag 502
               ||||||||||||||||||||
Sbjct: 1208087 aaggaaagggtagtctgtag 1208068



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>emb|Z50109.1|CEC09H10 Caenorhabditis elegans Cosmid C09H10, complete sequence
          Length = 40453

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 245  cctgaatatcttcatcattt 264
            ||||||||||||||||||||
Sbjct: 9968 cctgaatatcttcatcattt 9987



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>emb|AL358214.10| Human DNA sequence from clone RP11-675O23 on chromosome 10, complete
              sequence
          Length = 181186

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    aatatcttcatcattttgga 268
              ||||||||||||||||||||
Sbjct: 119206 aatatcttcatcattttgga 119187



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>emb|AL669852.6| Mouse DNA sequence from clone RP23-339F11 on chromosome 11, complete
              sequence
          Length = 116014

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     tttctactcaaatactgaag 54
              ||||||||||||||||||||
Sbjct: 104302 tttctactcaaatactgaag 104321



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>ref|NM_143722.2| Drosophila melanogaster ENL/AF9-related CG4913-RA (ear), mRNA
          Length = 3178

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 216  ccggtgcccctccctcggtg 235
            ||||||||||||||||||||
Sbjct: 1908 ccggtgcccctccctcggtg 1889



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>gb|AC027506.12| Homo sapiens chromosome 18, clone RP11-762J3, complete sequence
          Length = 189781

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     accaagtctaaaactaaact 107
              ||||||||||||||||||||
Sbjct: 146269 accaagtctaaaactaaact 146250



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>gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, region 38E-38F, BAC clone
             BACR07D17, complete sequence
          Length = 173422

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   ttcacctcggagttcaggca 373
             ||||||||||||||||||||
Sbjct: 46054 ttcacctcggagttcaggca 46073



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>gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, region 88E-88F, BAC clone
             BACR13A02, complete sequence
          Length = 166141

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   ccggtgcccctccctcggtg 235
             ||||||||||||||||||||
Sbjct: 82262 ccggtgcccctccctcggtg 82243



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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 428    ggctttctcctgctccacca 447
              ||||||||||||||||||||
Sbjct: 365044 ggctttctcctgctccacca 365063



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>emb|BX640579.10| Zebrafish DNA sequence from clone CH211-266K5 in linkage group 19,
             complete sequence
          Length = 168768

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   cttcatcattttggacactt 273
             ||||||||||||||||||||
Sbjct: 51728 cttcatcattttggacactt 51747



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>emb|CR962125.2| Medicago truncatula chromosome 5 clone mth2-179a9, COMPLETE SEQUENCE
          Length = 113972

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   tttccttctcagcatccatc 527
             ||||||||||||||||||||
Sbjct: 90498 tttccttctcagcatccatc 90517



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>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete
              sequence
          Length = 236375

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    ccggtgcccctccctcggtg 235
              ||||||||||||||||||||
Sbjct: 126694 ccggtgcccctccctcggtg 126675



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>gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77 of 83 of the complete
             sequence
          Length = 270158

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   ttcacctcggagttcaggca 373
             ||||||||||||||||||||
Sbjct: 35868 ttcacctcggagttcaggca 35887



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>gb|BT001257.1| Drosophila melanogaster AT01735 full insert cDNA
          Length = 3006

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 216  ccggtgcccctccctcggtg 235
            ||||||||||||||||||||
Sbjct: 1814 ccggtgcccctccctcggtg 1795



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>gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s DS04217 (D56) and DS00582
             (D85)), complete sequence
          Length = 142799

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   ttcacctcggagttcaggca 373
             ||||||||||||||||||||
Sbjct: 43481 ttcacctcggagttcaggca 43462



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>dbj|AP006674.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT30L06, TM0369c,
             complete sequence
          Length = 68065

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   ttctcagcatccatccttac 532
             ||||||||||||||||||||
Sbjct: 65329 ttctcagcatccatccttac 65348


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,569,846
Number of Sequences: 3902068
Number of extensions: 4569846
Number of successful extensions: 79442
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79298
Number of HSP's gapped (non-prelim): 138
length of query: 618
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 595
effective length of database: 17,143,297,704
effective search space: 10200262133880
effective search space used: 10200262133880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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