Clone Name	rbah63g18
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_468478.1| Oryza sativa (japonica cultivar-group), mRNA	335	1e-88
2	gb|AY103927.1| Zea mays PCO061369 mRNA sequence	311	2e-81
3	gb|BT012798.1| Lycopersicon esculentum clone 113812R, mRNA sequence	200	4e-48
4	gb|DQ317309.1| Musa acuminata putative vacuolar ATP synthase sub...	182	1e-42
5	ref|NM_116496.3| Arabidopsis thaliana hydrogen-transporting ATP ...	127	5e-26
6	gb|AY117236.1| Arabidopsis thaliana putative vacuolar ATPase (At...	127	5e-26
7	gb|AY065277.1| Arabidopsis thaliana putative vacuolar ATPase (At...	127	5e-26
8	emb|BX828935.1|CNS0A3F5 Arabidopsis thaliana Full-length cDNA Co...	127	5e-26
9	gb|AY084277.1| Arabidopsis thaliana clone 10207 mRNA, complete s...	127	5e-26
10	emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4,...	121	3e-24
11	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	121	3e-24
12	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	119	1e-23
13	dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic D...	119	1e-23
14	ref|NM_116495.2| Arabidopsis thaliana tryptophan synthase AT4G02...	94	7e-16
15	gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome I...	94	7e-16
16	emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, c...	94	7e-16
17	ref|XM_471237.1| Oryza sativa (japonica cultivar-group), predic...	76	2e-10
18	gb|DQ198167.1| Nicotiana tabacum cultivar Samsun NN vacuolar ATP...	72	3e-09
19	dbj|AP006681.1| Lotus japonicus genomic DNA, chromosome 1, clone...	62	3e-06
20	emb|CR751234.13| Zebrafish DNA sequence from clone DKEY-164M14 i...	52	0.002
21	emb|BX004862.9| Zebrafish DNA sequence from clone DKEY-200M9 in ...	52	0.002
22	ref|XM_969923.1| PREDICTED: Tribolium castaneum similar to CG821...	50	0.010
23	ref|XM_715957.1| Candida albicans SC5314 vacuolar membrane ATPas...	48	0.038
24	gb|AY426266.1| Solanum tarijense blight resistance protein T118 ...	44	0.60
25	gb|AC009461.5|AC009461 Drosophila melanogaster, chromosome 3R, r...	44	0.60
26	gb|AC009742.4|AC009742 Drosophila melanogaster, chromosome 3R, r...	44	0.60
27	gb|AE003718.3| Drosophila melanogaster chromosome 3R, section 56...	44	0.60
28	gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome	42	2.4
29	ref|XM_445592.1| Candida glabrata CBS138, CAGL0D04048g partial mRNA	42	2.4
30	emb|AL627230.15| Human DNA sequence from clone RP11-12A20 on chr...	42	2.4
31	emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chr...	42	2.4
32	emb|AL034349.3|HS86D1 Human DNA sequence from clone RP1-86D1 on ...	42	2.4
33	emb|CR380950.1| Candida glabrata strain CBS138 chromosome D comp...	42	2.4
34	gb|AC024451.8| Homo sapiens chromosome 11, clone RP11-697N18, co...	42	2.4
35	emb|BX649557.8| Zebrafish DNA sequence from clone DKEYP-61G11 in...	42	2.4
36	gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome	40	9.4
37	gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com...	40	9.4
38	ref|XM_715837.1| Candida albicans SC5314 vacuolar H(+)-ATPase (C...	40	9.4
39	gb|AC154675.2| Mus musculus BAC clone RP23-143J5 from chromosome...	40	9.4
40	gb|AC158625.9| Mus musculus 6 BAC RP23-78J15 (Roswell Park Cance...	40	9.4
41	gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, co...	40	9.4
42	ref|XM_755580.1| Ustilago maydis 521 hypothetical protein (UM045...	40	9.4
43	gb|AC122878.4| Mus musculus BAC clone RP23-116F15 from chromosom...	40	9.4
44	gb|AC124462.2| Mus musculus BAC clone RP24-146O4 from chromosome...	40	9.4
45	gb|AC006974.2| Homo sapiens PAC clone RP5-958B11 from 7, complet...	40	9.4
46	gb|AC107769.7| Mus musculus chromosome 16, clone RP23-130N20, co...	40	9.4
47	gb|AE014075.1| Escherichia coli CFT073, complete genome	40	9.4
48	gb|CP000243.1| Escherichia coli UTI89, complete genome	40	9.4
49	emb|AL589645.10| Human DNA sequence from clone RP11-251H13 on ch...	40	9.4
50	gb|U00096.2| Escherichia coli K-12 MG1655, complete genome	40	9.4
51	emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos...	40	9.4
52	gb|DQ443526.1| Agrobacterium vitis NADP-me gene, partial cds; Av...	40	9.4
53	dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome	40	9.4
54	gb|AC026343.17| Homo sapiens 3 BAC RP11-384F7 (Roswell Park Canc...	40	9.4
55	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	40	9.4
56	gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome...	40	9.4
57	gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome...	40	9.4
58	gb|AC142455.4| Mus musculus BAC clone RP23-179B15 from chromosom...	40	9.4
59	dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo...	40	9.4
60	gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome	40	9.4
61	dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D...	40	9.4
62	dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic D...	40	9.4
63	emb|AL929523.5| Zebrafish DNA sequence from clone CH211-250I3, c...	40	9.4
64	gb|U29580.1|ECU29580 Escherichia coli K-12 genome; approximately...	40	9.4
65	emb|CT030150.14| Mouse DNA sequence from clone RP23-414I13 on ch...	40	9.4
66	gb|AC145610.4| Mus musculus BAC clone RP24-281O20 from 18, compl...	40	9.4
67	gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome	40	9.4
68	dbj|AP005228.3| Homo sapiens genomic DNA, chromosome 18 clone:RP...	40	9.4
69	dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome	40	9.4
70	gb|CP000034.1| Shigella dysenteriae Sd197, complete genome	40	9.4
71	gb|CP000036.1| Shigella boydii Sb227, complete genome	40	9.4
72	gb|CP000038.1| Shigella sonnei Ss046, complete genome	40	9.4
73	gb|M12843.1|ECOPYRG E.coli pyrG (complete cds) and eno (partial ...	40	9.4
74	dbj|AP003496.1| Homo sapiens genomic DNA, chromosome 8q23, clone...	40	9.4
75	dbj|AP000874.4| Homo sapiens genomic DNA, chromosome 18 clone:RP...	40	9.4

---

>ref|XM_468478.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 393

 Score =  335 bits (169), Expect = 1e-88
 Identities = 334/389 (85%)
 Strand = Plus / Minus

                                                                       
Query: 220 cgcctatcagaagcaaccgagtcagcagaaaatagatacttcacacgagaaaggaccgaa 279
           |||||||| || || ||||| ||||||||||| || |||||||| |||||||| || |||
Sbjct: 389 cgcctatctgatgccaccgattcagcagaaaacaggtacttcacgcgagaaagaacagaa 330

                                                                       
Query: 280 tcacttgctggatcatatggatggtccttggatgggatttccaatatcgcagggattggc 339
           ||   |||||| ||||| ||||| |||||||||||||| |||||||| ||||| |  |||
Sbjct: 329 tcgtgtgctgggtcatacggatgatccttggatgggatctccaatatagcaggaacgggc 270

                                                                       
Query: 340 ttgttgtagctatccaccagaaatctaatcatgtttgcaatatattggctgatgagcaca 399
            ||||||||||||||||||| || || |||||||| |||| ||||||||||||||| |||
Sbjct: 269 ctgttgtagctatccaccaggaaccttatcatgttcgcaacatattggctgatgagaaca 210

                                                                       
Query: 400 atagcaatatcctcccttgcagtaaattctttaaatgcatcttcaatctgtttcactgtg 459
           || ||||| |||||||||| ||| ||||| |||||||||||||| || ||||| ||||| 
Sbjct: 209 attgcaatgtcctcccttgtagtgaattccttaaatgcatcttcgatttgtttgactgtt 150

                                                                       
Query: 460 gttttgttatccacaagaaggtaatttgttttcttgcgcagatcaacattgccaacccca 519
           ||||||||||| |||| |||||||||||| || || | |||||||||||||||||| |||
Sbjct: 149 gttttgttatcaacaataaggtaatttgtctttttcctcagatcaacattgccaactcca 90

                                                                       
Query: 520 gccatcaaaaacccagtaacagtgtcctcatcagcgatgatggcgatgagcgcggagttg 579
           |||| |||||||||||| || |||||||| || ||||||||||||||||| |||||| ||
Sbjct: 89  gccaacaaaaacccagtgaccgtgtcctcgtcggcgatgatggcgatgagagcggagctg 30

                                        
Query: 580 ttcgccgggatattggacctccccgccat 608
           || | ||||||  ||| ||||||||||||
Sbjct: 29  ttggtcgggatgctgggcctccccgccat 1

---

>gb|AY103927.1| Zea mays PCO061369 mRNA sequence
          Length = 866

 Score =  311 bits (157), Expect = 2e-81
 Identities = 331/389 (85%)
 Strand = Plus / Minus

                                                                       
Query: 220 cgcctatcagaagcaaccgagtcagcagaaaatagatacttcacacgagaaaggaccgaa 279
           ||||||||||| || ||||| || ||||| || ||||| ||||| ||||| || || || 
Sbjct: 594 cgcctatcagacgccaccgattctgcagagaacagatatttcactcgagagagcacagag 535

                                                                       
Query: 280 tcacttgctggatcatatggatggtccttggatgggatttccaatatcgcagggattggc 339
           ||    |||||||||||||||||||||||||||||||| ||||  || |||||||  |||
Sbjct: 534 tcgtgcgctggatcatatggatggtccttggatgggatctccagaatagcagggacgggc 475

                                                                       
Query: 340 ttgttgtagctatccaccagaaatctaatcatgtttgcaatatattggctgatgagcaca 399
           ||||||||||||||||||||||| || |||||||| |||||||| || ||||||||||||
Sbjct: 474 ttgttgtagctatccaccagaaaccttatcatgttggcaatatactgactgatgagcaca 415

                                                                       
Query: 400 atagcaatatcctcccttgcagtaaattctttaaatgcatcttcaatctgtttcactgtg 459
           ||||||||||||||||| | |||||||||||| || ||||| || || ||||| ||||| 
Sbjct: 414 atagcaatatcctccctcgtagtaaattctttgaacgcatcctcgatttgtttaactgtc 355

                                                                       
Query: 460 gttttgttatccacaagaaggtaatttgttttcttgcgcagatcaacattgccaacccca 519
           || ||||| || || || ||||| || ||||||||||||||||||||||||||||| || 
Sbjct: 354 gtcttgttgtcgacgaggaggtagttggttttcttgcgcagatcaacattgccaacgccg 295

                                                                       
Query: 520 gccatcaaaaacccagtaacagtgtcctcatcagcgatgatggcgatgagcgcggagttg 579
           |||||||| || ||||| || |||||||| || |||||||| |||||||| |||||||||
Sbjct: 294 gccatcaagaagccagtgacggtgtcctcgtcggcgatgattgcgatgagggcggagttg 235

                                        
Query: 580 ttcgccgggatattggacctccccgccat 608
           || |  ||||| |||| ||||||||||||
Sbjct: 234 ttagtggggatgttggccctccccgccat 206

---

>gb|BT012798.1| Lycopersicon esculentum clone 113812R, mRNA sequence
          Length = 772

 Score =  200 bits (101), Expect = 4e-48
 Identities = 245/293 (83%)
 Strand = Plus / Minus

                                                                       
Query: 289 ggatcatatggatggtccttggatgggatttccaatatcgcagggattggcttgttgtag 348
           |||||||||||||||||||| || || || ||||| || || || ||||| |||||||| 
Sbjct: 430 ggatcatatggatggtcctttgaaggaatctccaaaatggctggaattggtttgttgtaa 371

                                                                       
Query: 349 ctatccaccagaaatctaatcatgtttgcaatatattggctgatgagcacaatagcaata 408
           ||||| |||| |||||| |||||||| || | |||||||||||| | ||| || || || 
Sbjct: 370 ctatcaaccaaaaatcttatcatgttggccacatattggctgatcaacactattgcgatg 311

                                                                       
Query: 409 tcctcccttgcagtaaattctttaaatgcatcttcaatctgtttcactgtggttttgtta 468
           ||||| ||||  || ||||| ||||| |||||||||||||| |||||||| |||||   |
Sbjct: 310 tcctctcttgtggtgaattccttaaaagcatcttcaatctgcttcactgttgtttttgaa 251

                                                                       
Query: 469 tccacaagaaggtaatttgttttcttgcgcagatcaacattgccaaccccagccatcaaa 528
           ||||||| |||||||||||||||| | | || ||||||||||||||| |||||||  |||
Sbjct: 250 tccacaataaggtaatttgttttcctcctcaaatcaacattgccaactccagccagtaaa 191

                                                                
Query: 529 aacccagtaacagtgtcctcatcagcgatgatggcgatgagcgcggagttgtt 581
           || |||||||  ||||||||||||||||| ||||| ||||| || ||||||||
Sbjct: 190 aatccagtaattgtgtcctcatcagcgatcatggcaatgagggctgagttgtt 138

---

>gb|DQ317309.1| Musa acuminata putative vacuolar ATP synthase subunit F mRNA,
           partial cds
          Length = 386

 Score =  182 bits (92), Expect = 1e-42
 Identities = 242/292 (82%)
 Strand = Plus / Minus

                                                                       
Query: 260 tcacacgagaaaggaccgaatcacttgctggatcatatggatggtccttggatgggattt 319
           |||| |||||||| ||||||||   ||| || ||||||||||| |||||||| || || |
Sbjct: 382 tcactcgagaaagaaccgaatcgtgtgcagggtcatatggatgatccttggagggaatct 323

                                                                       
Query: 320 ccaatatcgcagggattggcttgttgtagctatccaccagaaatctaatcatgtttgcaa 379
           |||| || || || |  || ||||||||||||||||||||||| |  |||||||||||||
Sbjct: 322 ccaagatagctggcacaggtttgttgtagctatccaccagaaaccgtatcatgtttgcaa 263

                                                                       
Query: 380 tatattggctgatgagcacaatagcaatatcctcccttgcagtaaattctttaaatgcat 439
           |||||||| | || ||||||| |||||||||||||||||  || || ||||| |||||||
Sbjct: 262 tatattggataatcagcacaacagcaatatcctcccttgaggtgaactctttgaatgcat 203

                                                                       
Query: 440 cttcaatctgtttcactgtggttttgttatccacaagaaggtaatttgttttcttgcgca 499
           |||  ||   |||||| || |||||    ||||||| |||||||||||| ||  | || |
Sbjct: 202 cttttatagctttcacagtagtttttgagtccacaataaggtaatttgtctttctccgta 143

                                                               
Query: 500 gatcaacattgccaaccccagccatcaaaaacccagtaacagtgtcctcatc 551
           ||||||||| |||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 142 gatcaacatcgccaactccagccatcaaaaatccagtaacagtgtcctcatc 91

---

>ref|NM_116496.3| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational
           mechanism / hydrogen-transporting ATPase, rotational
           mechanism AT4G02620 mRNA, complete cds
          Length = 636

 Score =  127 bits (64), Expect = 5e-26
 Identities = 268/336 (79%)
 Strand = Plus / Minus

                                                                       
Query: 244 gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 303
           |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 443 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 384

                                                                       
Query: 304 tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccaccagaaat 363
           |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||  || 
Sbjct: 383 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccaccaagaac 324

                                                                       
Query: 364 ctaatcatgtttgcaatatattggctgatgagcacaatagcaatatcctcccttgcagta 423
           |  ||||| || || ||||||||||| |  || |  ||||| ||||| |||||||| |  
Sbjct: 323 cggatcatattggcgatatattggcttaaaagaatgatagcgatatcatcccttgctgag 264

                                                                       
Query: 424 aattctttaaatgcatcttcaatctgtttcactgtggttttgttatccacaagaaggtaa 483
           ||||| || || ||||| ||||| ||| |||| || || ||   |||||| |  ||||||
Sbjct: 263 aattccttgaaagcatcctcaatttgtctcacagttgtctttgaatccacgatgaggtaa 204

                                                                       
Query: 484 tttgttttcttgcgcagatcaacattgccaaccccagccatcaaaaacccagtaacagtg 543
           ||||| ||| | |  |  |||||||| ||||| |||||||||||||| |||  |||||||
Sbjct: 203 tttgtcttcctccttatgtcaacattaccaactccagccatcaaaaatccaacaacagtg 144

                                               
Query: 544 tcctcatcagcgatgatggcgatgagcgcggagttg 579
           |||||||| ||||| || |||||||| || ||||||
Sbjct: 143 tcctcatcggcgatcattgcgatgagggcagagttg 108

---

>gb|AY117236.1| Arabidopsis thaliana putative vacuolar ATPase (At4g02620) mRNA,
           complete cds
          Length = 418

 Score =  127 bits (64), Expect = 5e-26
 Identities = 268/336 (79%)
 Strand = Plus / Minus

                                                                       
Query: 244 gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 303
           |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 365 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 306

                                                                       
Query: 304 tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccaccagaaat 363
           |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||  || 
Sbjct: 305 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccaccaagaac 246

                                                                       
Query: 364 ctaatcatgtttgcaatatattggctgatgagcacaatagcaatatcctcccttgcagta 423
           |  ||||| || || ||||||||||| |  || |  ||||| ||||| |||||||| |  
Sbjct: 245 cggatcatattggcgatatattggcttaaaagaatgatagcgatatcatcccttgctgag 186

                                                                       
Query: 424 aattctttaaatgcatcttcaatctgtttcactgtggttttgttatccacaagaaggtaa 483
           ||||| || || ||||| ||||| ||| |||| || || ||   |||||| |  ||||||
Sbjct: 185 aattccttgaaagcatcctcaatttgtctcacagttgtctttgaatccacgatgaggtaa 126

                                                                       
Query: 484 tttgttttcttgcgcagatcaacattgccaaccccagccatcaaaaacccagtaacagtg 543
           ||||| ||| | |  |  |||||||| ||||| |||||||||||||| |||  |||||||
Sbjct: 125 tttgtcttcctccttatgtcaacattaccaactccagccatcaaaaatccaacaacagtg 66

                                               
Query: 544 tcctcatcagcgatgatggcgatgagcgcggagttg 579
           |||||||| ||||| || |||||||| || ||||||
Sbjct: 65  tcctcatcggcgatcattgcgatgagggcagagttg 30

---

>gb|AY065277.1| Arabidopsis thaliana putative vacuolar ATPase (At4g02620) mRNA,
           complete cds
          Length = 619

 Score =  127 bits (64), Expect = 5e-26
 Identities = 268/336 (79%)
 Strand = Plus / Minus

                                                                       
Query: 244 gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 303
           |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 419 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 360

                                                                       
Query: 304 tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccaccagaaat 363
           |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||  || 
Sbjct: 359 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccaccaagaac 300

                                                                       
Query: 364 ctaatcatgtttgcaatatattggctgatgagcacaatagcaatatcctcccttgcagta 423
           |  ||||| || || ||||||||||| |  || |  ||||| ||||| |||||||| |  
Sbjct: 299 cggatcatattggcgatatattggcttaaaagaatgatagcgatatcatcccttgctgag 240

                                                                       
Query: 424 aattctttaaatgcatcttcaatctgtttcactgtggttttgttatccacaagaaggtaa 483
           ||||| || || ||||| ||||| ||| |||| || || ||   |||||| |  ||||||
Sbjct: 239 aattccttgaaagcatcctcaatttgtctcacagttgtctttgaatccacgatgaggtaa 180

                                                                       
Query: 484 tttgttttcttgcgcagatcaacattgccaaccccagccatcaaaaacccagtaacagtg 543
           ||||| ||| | |  |  |||||||| ||||| |||||||||||||| |||  |||||||
Sbjct: 179 tttgtcttcctccttatgtcaacattaccaactccagccatcaaaaatccaacaacagtg 120

                                               
Query: 544 tcctcatcagcgatgatggcgatgagcgcggagttg 579
           |||||||| ||||| || |||||||| || ||||||
Sbjct: 119 tcctcatcggcgatcattgcgatgagggcagagttg 84

---

>emb|BX828935.1|CNS0A3F5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL52ZE03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 612

 Score =  127 bits (64), Expect = 5e-26
 Identities = 268/336 (79%)
 Strand = Plus / Minus

                                                                       
Query: 244 gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 303
           |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 443 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 384

                                                                       
Query: 304 tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccaccagaaat 363
           |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||  || 
Sbjct: 383 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccaccaagaac 324

                                                                       
Query: 364 ctaatcatgtttgcaatatattggctgatgagcacaatagcaatatcctcccttgcagta 423
           |  ||||| || || ||||||||||| |  || |  ||||| ||||| |||||||| |  
Sbjct: 323 cggatcatattggcgatatattggcttaaaagaatgatagcgatatcatcccttgctgag 264

                                                                       
Query: 424 aattctttaaatgcatcttcaatctgtttcactgtggttttgttatccacaagaaggtaa 483
           ||||| || || ||||| ||||| ||| |||| || || ||   |||||| |  ||||||
Sbjct: 263 aattccttgaaagcatcctcaatttgtctcacagttgtctttgaatccacgatgaggtaa 204

                                                                       
Query: 484 tttgttttcttgcgcagatcaacattgccaaccccagccatcaaaaacccagtaacagtg 543
           ||||| ||| | |  |  |||||||| ||||| |||||||||||||| |||  |||||||
Sbjct: 203 tttgtcttcctccttatgtcaacattaccaactccagccatcaaaaatccaacaacagtg 144

                                               
Query: 544 tcctcatcagcgatgatggcgatgagcgcggagttg 579
           |||||||| ||||| || |||||||| || ||||||
Sbjct: 143 tcctcatcggcgatcattgcgatgagggcagagttg 108

---

>gb|AY084277.1| Arabidopsis thaliana clone 10207 mRNA, complete sequence
          Length = 600

 Score =  127 bits (64), Expect = 5e-26
 Identities = 268/336 (79%)
 Strand = Plus / Minus

                                                                       
Query: 244 gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 303
           |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 440 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 381

                                                                       
Query: 304 tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccaccagaaat 363
           |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||  || 
Sbjct: 380 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccaccaagaac 321

                                                                       
Query: 364 ctaatcatgtttgcaatatattggctgatgagcacaatagcaatatcctcccttgcagta 423
           |  ||||| || || ||||||||||| |  || |  ||||| ||||| |||||||| |  
Sbjct: 320 cggatcatattggcgatatattggcttaaaagaatgatagcgatatcatcccttgctgag 261

                                                                       
Query: 424 aattctttaaatgcatcttcaatctgtttcactgtggttttgttatccacaagaaggtaa 483
           ||||| || || ||||| ||||| ||| |||| || || ||   |||||| |  ||||||
Sbjct: 260 aattccttgaaagcatcctcaatttgtctcacagttgtctttgaatccacgatgaggtaa 201

                                                                       
Query: 484 tttgttttcttgcgcagatcaacattgccaaccccagccatcaaaaacccagtaacagtg 543
           ||||| ||| | |  |  |||||||| ||||| |||||||||||||| |||  |||||||
Sbjct: 200 tttgtcttcctccttatgtcaacattaccaactccagccatcaaaaatccaacaacagtg 141

                                               
Query: 544 tcctcatcagcgatgatggcgatgagcgcggagttg 579
           |||||||| ||||| || |||||||| || ||||||
Sbjct: 140 tcctcatcggcgatcattgcgatgagggcagagttg 105

---

>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20,
              complete sequence
          Length = 138572

 Score =  121 bits (61), Expect = 3e-24
 Identities = 139/165 (84%)
 Strand = Plus / Minus

                                                                          
Query: 215    ctcaacgcctatcagaagcaaccgagtcagcagaaaatagatacttcacacgagaaagga 274
              |||| |||||||| || || || || ||||| |||||||| |||||||| ||||||||||
Sbjct: 117573 ctcatcgcctatctgacgccactgattcagcggaaaataggtacttcacgcgagaaagga 117514

                                                                          
Query: 275    ccgaatcacttgctggatcatatggatggtccttggatgggatttccaatatcgcaggga 334
              | |||||   |||||| ||||| ||||| ||||| ||||| || |||||||| ||||| |
Sbjct: 117513 cagaatcgtgtgctgggtcataaggatgatccttcgatggaatctccaatatagcaggaa 117454

                                                           
Query: 335    ttggcttgttgtagctatccaccagaaatctaatcatgtttgcaa 379
                ||  |||||||||||||||| ||||||||||||||||||||||
Sbjct: 117453 ccggtctgttgtagctatccacaagaaatctaatcatgtttgcaa 117409



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                          
Query: 464    tgttatccacaagaaggtaatttgttttcttgcgcagatcaacattgccaaccccagcca 523
              ||||||| |||| ||| |||||||| || || | |||||||||||||||||| |||||||
Sbjct: 116190 tgttatcaacaataagataatttgtctttttcctcagatcaacattgccaactccagcca 116131

                                      
Query: 524    tcaaaaacccagtaacagtgtcct 547
               | |||||||||| || |||||||
Sbjct: 116130 actaaaacccagtcaccgtgtcct 116107



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                          
Query: 381    atattggctgatgagcacaatagcaatatcctcccttgcagtaaattctttaaatgcatc 440
              |||||| |||||||| ||||| ||||| |||||||||| ||| || || ||||| |||||
Sbjct: 116886 atattgactgatgagtacaattgcaatgtcctcccttgtagtgaactccttaaacgcatc 116827

                                     
Query: 441    ttcaatctgtttcactgtggttt 463
              |||||| ||||| ||||| ||||
Sbjct: 116826 ttcaatttgtttgactgttgttt 116804



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                      
Query: 553    gcgatgatggcgatgagcgcggagttgttcgccgggatattggacctccccgccat 608
              |||||||||||||||||||| ||| |||| | ||||||  ||| ||||||||||||
Sbjct: 114827 gcgatgatggcgatgagcgcagagctgttggtcgggatgctgggcctccccgccat 114772

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  121 bits (61), Expect = 3e-24
 Identities = 139/165 (84%)
 Strand = Plus / Minus

                                                                           
Query: 215     ctcaacgcctatcagaagcaaccgagtcagcagaaaatagatacttcacacgagaaagga 274
               |||| |||||||| || || || || ||||| |||||||| |||||||| ||||||||||
Sbjct: 2501671 ctcatcgcctatctgacgccactgattcagcggaaaataggtacttcacgcgagaaagga 2501612

                                                                           
Query: 275     ccgaatcacttgctggatcatatggatggtccttggatgggatttccaatatcgcaggga 334
               | |||||   |||||| ||||| ||||| ||||| ||||| || |||||||| ||||| |
Sbjct: 2501611 cagaatcgtgtgctgggtcataaggatgatccttcgatggaatctccaatatagcaggaa 2501552

                                                            
Query: 335     ttggcttgttgtagctatccaccagaaatctaatcatgtttgcaa 379
                 ||  |||||||||||||||| ||||||||||||||||||||||
Sbjct: 2501551 ccggtctgttgtagctatccacaagaaatctaatcatgtttgcaa 2501507



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                           
Query: 464     tgttatccacaagaaggtaatttgttttcttgcgcagatcaacattgccaaccccagcca 523
               ||||||| |||| ||| |||||||| || || | |||||||||||||||||| |||||||
Sbjct: 2500288 tgttatcaacaataagataatttgtctttttcctcagatcaacattgccaactccagcca 2500229

                                       
Query: 524     tcaaaaacccagtaacagtgtcct 547
                |||||||||||| || |||||||
Sbjct: 2500228 acaaaaacccagtcaccgtgtcct 2500205



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                           
Query: 381     atattggctgatgagcacaatagcaatatcctcccttgcagtaaattctttaaatgcatc 440
               |||||| |||||||| ||||| ||||| |||||||||| ||| || || ||||| |||||
Sbjct: 2500984 atattgactgatgagtacaattgcaatgtcctcccttgtagtgaactccttaaacgcatc 2500925

                                      
Query: 441     ttcaatctgtttcactgtggttt 463
               |||||| ||||| ||||| ||||
Sbjct: 2500924 ttcaatttgtttgactgttgttt 2500902



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                       
Query: 553     gcgatgatggcgatgagcgcggagttgttcgccgggatattggacctccccgccat 608
               |||||||||||||||||||| ||| |||| | ||||||  ||| ||||||||||||
Sbjct: 2498925 gcgatgatggcgatgagcgcagagctgttggtcgggatgctgggcctccccgccat 2498870

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  119 bits (60), Expect = 1e-23
 Identities = 135/160 (84%)
 Strand = Plus / Minus

                                                                            
Query: 220      cgcctatcagaagcaaccgagtcagcagaaaatagatacttcacacgagaaaggaccgaa 279
                |||||||| || || ||||| ||||||||||| || |||||||| |||||||| || |||
Sbjct: 35448851 cgcctatctgatgccaccgattcagcagaaaacaggtacttcacgcgagaaagaacagaa 35448792

                                                                            
Query: 280      tcacttgctggatcatatggatggtccttggatgggatttccaatatcgcagggattggc 339
                ||   |||||| ||||| ||||| |||||||||||||| |||||||| ||||| |  |||
Sbjct: 35448791 tcgtgtgctgggtcatacggatgatccttggatgggatctccaatatagcaggaacgggc 35448732

                                                        
Query: 340      ttgttgtagctatccaccagaaatctaatcatgtttgcaa 379
                 ||||||||||||||||||| || || |||||||| ||||
Sbjct: 35448731 ctgttgtagctatccaccaggaaccttatcatgttcgcaa 35448692



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                            
Query: 464      tgttatccacaagaaggtaatttgttttcttgcgcagatcaacattgccaaccccagcca 523
                ||||||| |||| |||||||||||| || || | |||||||||||||||||| |||||||
Sbjct: 35447306 tgttatcaacaataaggtaatttgtctttttcctcagatcaacattgccaactccagcca 35447247

                                        
Query: 524      tcaaaaacccagtaacagtgtcct 547
                 |||||||||||| || |||||||
Sbjct: 35447246 acaaaaacccagtgaccgtgtcct 35447223



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                            
Query: 381      atattggctgatgagcacaatagcaatatcctcccttgcagtaaattctttaaatgcatc 440
                ||||||||||||||| ||||| ||||| |||||||||| ||| ||||| |||||||||||
Sbjct: 35448022 atattggctgatgagaacaattgcaatgtcctcccttgtagtgaattccttaaatgcatc 35447963

                                       
Query: 441      ttcaatctgtttcactgtggttt 463
                ||| || ||||| ||||| ||||
Sbjct: 35447962 ttcgatttgtttgactgttgttt 35447940



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 553      gcgatgatggcgatgagcgcggagttgttcgccgggatattggacctccccgccat 608
                ||||||||||||||||| |||||| |||| | ||||||  ||| ||||||||||||
Sbjct: 35446425 gcgatgatggcgatgagagcggagctgttggtcgggatgctgggcctccccgccat 35446370

---

>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1063_D06
          Length = 102439

 Score =  119 bits (60), Expect = 1e-23
 Identities = 135/160 (84%)
 Strand = Plus / Minus

                                                                         
Query: 220   cgcctatcagaagcaaccgagtcagcagaaaatagatacttcacacgagaaaggaccgaa 279
             |||||||| || || ||||| ||||||||||| || |||||||| |||||||| || |||
Sbjct: 60372 cgcctatctgatgccaccgattcagcagaaaacaggtacttcacgcgagaaagaacagaa 60313

                                                                         
Query: 280   tcacttgctggatcatatggatggtccttggatgggatttccaatatcgcagggattggc 339
             ||   |||||| ||||| ||||| |||||||||||||| |||||||| ||||| |  |||
Sbjct: 60312 tcgtgtgctgggtcatacggatgatccttggatgggatctccaatatagcaggaacgggc 60253

                                                     
Query: 340   ttgttgtagctatccaccagaaatctaatcatgtttgcaa 379
              ||||||||||||||||||| || || |||||||| ||||
Sbjct: 60252 ctgttgtagctatccaccaggaaccttatcatgttcgcaa 60213



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                         
Query: 464   tgttatccacaagaaggtaatttgttttcttgcgcagatcaacattgccaaccccagcca 523
             ||||||| |||| |||||||||||| || || | |||||||||||||||||| |||||||
Sbjct: 58827 tgttatcaacaataaggtaatttgtctttttcctcagatcaacattgccaactccagcca 58768

                                     
Query: 524   tcaaaaacccagtaacagtgtcct 547
              |||||||||||| || |||||||
Sbjct: 58767 acaaaaacccagtgaccgtgtcct 58744



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 381   atattggctgatgagcacaatagcaatatcctcccttgcagtaaattctttaaatgcatc 440
             ||||||||||||||| ||||| ||||| |||||||||| ||| ||||| |||||||||||
Sbjct: 59543 atattggctgatgagaacaattgcaatgtcctcccttgtagtgaattccttaaatgcatc 59484

                                    
Query: 441   ttcaatctgtttcactgtggttt 463
             ||| || ||||| ||||| ||||
Sbjct: 59483 ttcgatttgtttgactgttgttt 59461



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 553   gcgatgatggcgatgagcgcggagttgttcgccgggatattggacctccccgccat 608
             ||||||||||||||||| |||||| |||| | ||||||  ||| ||||||||||||
Sbjct: 57946 gcgatgatggcgatgagagcggagctgttggtcgggatgctgggcctccccgccat 57891

---

>ref|NM_116495.2| Arabidopsis thaliana tryptophan synthase AT4G02610 mRNA, complete cds
          Length = 1216

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                        
Query: 244  gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 303
            |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 1080 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 1139

                                                                   
Query: 304  tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccacca 358
            |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||
Sbjct: 1140 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccacca 1194

---

>gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome IV, near 15 cM,
             complete sequence
          Length = 113566

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 98/115 (85%)
 Strand = Plus / Minus

                                                                         
Query: 244   gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 303
             |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 61653 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 61594

                                                                    
Query: 304   tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccacca 358
             |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||
Sbjct: 61593 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccacca 61539



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 502   tcaacattgccaaccccagccatcaaaaacccagtaacagtgtcct 547
             |||||||| ||||| |||||||||||||| |||  |||||||||||
Sbjct: 60724 tcaacattaccaactccagccatcaaaaatccaacaacagtgtcct 60679

---

>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6
          Length = 194892

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                          
Query: 244    gcagaaaatagatacttcacacgagaaaggaccgaatcacttgctggatcatatggatgg 303
              |||||||| || ||||| |||||||| || || ||||||   || |||||||| ||||||
Sbjct: 185092 gcagaaaagaggtacttgacacgagagagaactgaatcatgagcaggatcatagggatgg 185151

                                                                     
Query: 304    tccttggatgggatttccaatatcgcagggattggcttgttgtagctatccacca 358
              |||||||| ||||| ||||| || ||||| | |||||||||||||||||||||||
Sbjct: 185152 tccttggaagggatctccaagattgcaggaactggcttgttgtagctatccacca 185206



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                            
Query: 502    tcaacattgccaaccccagccatcaaaaacccagtaacagtgtcct 547
              |||||||| ||||| |||||||||||||| |||  |||||||||||
Sbjct: 186021 tcaacattaccaactccagccatcaaaaatccaacaacagtgtcct 186066

---

>ref|XM_471237.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 84

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                       
Query: 527 aaaacccagtaacagtgtcctcatcagcgatgatggcgatgagcgcggagttgttcgccg 586
           |||||||||| || |||||||| || |||||||||||||||||||| ||| |||| | ||
Sbjct: 82  aaaacccagtcaccgtgtcctcgtcggcgatgatggcgatgagcgcagagctgttggtcg 23

                                 
Query: 587 ggatattggacctccccgccat 608
           ||||  ||| ||||||||||||
Sbjct: 22  ggatgctgggcctccccgccat 1

---

>gb|DQ198167.1| Nicotiana tabacum cultivar Samsun NN vacuolar ATP-related protein
           mRNA, partial cds
          Length = 455

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                       
Query: 289 ggatcatatggatggtccttggatgggatttccaatatcgcagggattggcttgttgtag 348
           |||||||||||||||||||| || || || ||||  || || || ||||| || ||||||
Sbjct: 123 ggatcatatggatggtcctttgaaggaatctccagaatggctggaattggtttattgtag 64

                                                       
Query: 349 ctatccaccagaaatctaatcatgtttgcaatatattggctgat 392
           ||||| ||||  ||||| ||||||||||| | ||||||||||||
Sbjct: 63  ctatcaaccaagaatctgatcatgtttgcgacatattggctgat 20

---

>dbj|AP006681.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375b,
            complete sequence
          Length = 61653

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                        
Query: 289  ggatcatatggatggtccttggatgggatttccaatatcgcagggattggcttgttgtag 348
            |||||||| || ||||| ||||| || || |||||||| ||||| |  ||||||||||||
Sbjct: 1259 ggatcataagggtggtctttggagggaatctccaatattgcaggaacaggcttgttgtag 1318

                                           
Query: 349  ctatccaccagaaatctaatcatgtttgcaa 379
            ||||| || ||||| || ||||| |||||||
Sbjct: 1319 ctatcaactagaaaccttatcatatttgcaa 1349



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 403  gcaatatcctcccttgcagtaaattctttaaatgcatcttcaatctgttt 452
            |||||||| |||||||  || || ||||| |||||||||||||| |||||
Sbjct: 1637 gcaatatcttcccttgttgtgaactctttgaatgcatcttcaatttgttt 1686

---

>emb|CR751234.13| Zebrafish DNA sequence from clone DKEY-164M14 in linkage group 20
              Contains the gene for a novel protein similar to vertebrate
              bromodomain containing 1 (BRD1), the gene for a novel
              protein similar to vertebrate asparagine-linked
              glycosylation 12 homolog (yeast,
              alpha-1,6-mannosyltransferase) (ALG12), the gene for a
              novel protein similar to vertebrate solute carrier family 6
              (neurotransmitter transporter, GABA), member 1 (SLC6A1),
              the gene for a novel protein similar to vertebrate zinc
              finger, BED domain containing 4 (ZBED4), the gene for a
              novel protein similar to vertebrate cysteine-rich with
              EGF-like domains 1 (CRELD1) (zgc:66383) and three CpG
              islands, complete sequence
          Length = 218596

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 113    cacaacagaatggcatgaataatttaatacagat 146
              ||||||||||||||| ||||||| ||||||||||
Sbjct: 171365 cacaacagaatggcaggaataatataatacagat 171398

---

>emb|BX004862.9| Zebrafish DNA sequence from clone DKEY-200M9 in linkage group 4 Contains
              the gene for a novel protein similar to vertebrate TAFA
              protein 5 (TAFA5) and a CpG island, complete sequence
          Length = 174359

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 113    cacaacagaatggcatgaataatttaatacagat 146
              ||||||||||||||| ||||||| ||||||||||
Sbjct: 136790 cacaacagaatggcaggaataatataatacagat 136757

---

>ref|XM_969923.1| PREDICTED: Tribolium castaneum similar to CG8210-PA (LOC663894),
           mRNA
          Length = 372

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 50/57 (87%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                    
Query: 283 cttgctgg-atcatatggatggtccttggatgggatttccaatatcgcagggattgg 338
           |||||||| |||||||||||||||||| || || |||||||| |  |||||||||||
Sbjct: 318 cttgctggcatcatatggatggtcctttgacggaatttccaagacagcagggattgg 262

---

>ref|XM_715957.1| Candida albicans SC5314 vacuolar membrane ATPase subunit F
           (CaO19_8424), mRNA
          Length = 369

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 289 ggatcatatggatggtccttggatgggatttc 320
           |||||||| |||||||| ||||||||||||||
Sbjct: 320 ggatcatacggatggtctttggatgggatttc 289

---

>gb|AY426266.1| Solanum tarijense blight resistance protein T118 gene, partial cds
          Length = 3641

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 238  gagtcagcagaaaatagatact 259
            ||||||||||||||||||||||
Sbjct: 1165 gagtcagcagaaaatagatact 1144

---

>gb|AC009461.5|AC009461 Drosophila melanogaster, chromosome 3R, region 90B-90C, BAC clone
              BACR11L13, complete sequence
          Length = 171612

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 362    atctaatcatgtttgcaatata 383
              ||||||||||||||||||||||
Sbjct: 144003 atctaatcatgtttgcaatata 144024

---

>gb|AC009742.4|AC009742 Drosophila melanogaster, chromosome 3R, region 90C-90C, BAC clone
             BACR21K03, complete sequence
          Length = 178100

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 362   atctaatcatgtttgcaatata 383
             ||||||||||||||||||||||
Sbjct: 78516 atctaatcatgtttgcaatata 78537

---

>gb|AE003718.3| Drosophila melanogaster chromosome 3R, section 56 of 118 of the complete
              sequence
          Length = 253101

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 362    atctaatcatgtttgcaatata 383
              ||||||||||||||||||||||
Sbjct: 178660 atctaatcatgtttgcaatata 178681

---

>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 423    aaattctttaaatgcatcttc 443
              |||||||||||||||||||||
Sbjct: 357400 aaattctttaaatgcatcttc 357420

---

>ref|XM_445592.1| Candida glabrata CBS138, CAGL0D04048g partial mRNA
          Length = 357

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 292 tcatatggatggtccttggatgggatttc 320
           ||||||||||||||||| ||||| |||||
Sbjct: 305 tcatatggatggtccttagatggaatttc 277

---

>emb|AL627230.15| Human DNA sequence from clone RP11-12A20 on chromosome 9 Contains six
             novel pseudogenes, the FAM27B gene for family with
             sequence similarity 27, member B, a pseudogene similar to
             part of ribosomal protein L10 (RPL10) and four CpG
             islands, complete sequence
          Length = 194246

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     atgttttcctgtttcccttgt 22
             |||||||||||||||||||||
Sbjct: 29055 atgttttcctgtttcccttgt 29075

---

>emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chromosome 9 Contains the
             FAM27C gene for family with sequence similarity 27, member
             C, three novel genes, five novel pseudogenes and six CpG
             islands, complete sequence
          Length = 202081

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     atgttttcctgtttcccttgt 22
             |||||||||||||||||||||
Sbjct: 93586 atgttttcctgtttcccttgt 93606

---

>emb|AL034349.3|HS86D1 Human DNA sequence from clone RP1-86D1 on chromosome 6q22.2-23.1
             Contains two novel genes and the 5' end of the PTPRK gene
             for protein tyrosine phosphatase, receptor type K
             (R-PTP-KAPPA) and a CpG island, complete sequence
          Length = 112604

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 132   taatttaatacagatacatgg 152
             |||||||||||||||||||||
Sbjct: 81094 taatttaatacagatacatgg 81074

---

>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence
          Length = 651701

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 292    tcatatggatggtccttggatgggatttc 320
              ||||||||||||||||| ||||| |||||
Sbjct: 403187 tcatatggatggtccttagatggaatttc 403215

---

>gb|AC024451.8| Homo sapiens chromosome 11, clone RP11-697N18, complete sequence
          Length = 159791

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 656    tgaaagcaggaatcacaggca 676
              |||||||||||||||||||||
Sbjct: 127437 tgaaagcaggaatcacaggca 127417

---

>emb|BX649557.8| Zebrafish DNA sequence from clone DKEYP-61G11 in linkage group 3,
             complete sequence
          Length = 163934

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 422   taaattctttaaatgcatcttcaat 446
             |||||||||||||| ||||||||||
Sbjct: 35643 taaattctttaaattcatcttcaat 35667

---

>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     tgcatcttcaatctgtttca 454
               ||||||||||||||||||||
Sbjct: 2867837 tgcatcttcaatctgtttca 2867856

---

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 567     gagcgcggagttgttcgccg 586
               ||||||||||||||||||||
Sbjct: 2192345 gagcgcggagttgttcgccg 2192364

---

>ref|XM_715837.1| Candida albicans SC5314 vacuolar H(+)-ATPase (CaO19_806), mRNA
          Length = 369

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 289 ggatcatatggatggtccttggatgggatttc 320
           |||||||| ||||| || ||||||||||||||
Sbjct: 320 ggatcatacggatgatctttggatgggatttc 289

---

>gb|AC154675.2| Mus musculus BAC clone RP23-143J5 from chromosome 14, complete sequence
          Length = 207264

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 655    atgaaagcaggaatcacagg 674
              ||||||||||||||||||||
Sbjct: 113308 atgaaagcaggaatcacagg 113327

---

>gb|AC158625.9| Mus musculus 6 BAC RP23-78J15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 246705

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   gcagtaaattctttaaatgc 437
             ||||||||||||||||||||
Sbjct: 83599 gcagtaaattctttaaatgc 83618

---

>gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, complete sequence
          Length = 236274

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    aacccgctggtccaatccag 87
             ||||||||||||||||||||
Sbjct: 29718 aacccgctggtccaatccag 29699

---

>ref|XM_755580.1| Ustilago maydis 521 hypothetical protein (UM04526.1) partial mRNA
          Length = 2340

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 548  catcagcgatgatggcgatgagcgcgga 575
            |||| |||||||||||||||||| ||||
Sbjct: 1830 catcggcgatgatggcgatgagcacgga 1857

---

>gb|AC122878.4| Mus musculus BAC clone RP23-116F15 from chromosome 14, complete
            sequence
          Length = 226611

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 130  aataatttaatacagatacatgga 153
            |||||||||||| |||||||||||
Sbjct: 7854 aataatttaataaagatacatgga 7877

---

>gb|AC124462.2| Mus musculus BAC clone RP24-146O4 from chromosome 14, complete sequence
          Length = 133903

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 655    atgaaagcaggaatcacagg 674
              ||||||||||||||||||||
Sbjct: 127594 atgaaagcaggaatcacagg 127613

---

>gb|AC006974.2| Homo sapiens PAC clone RP5-958B11 from 7, complete sequence
          Length = 90241

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    tcccttgttctaatatccaa 34
             ||||||||||||||||||||
Sbjct: 58332 tcccttgttctaatatccaa 58313

---

>gb|AC107769.7| Mus musculus chromosome 16, clone RP23-130N20, complete sequence
          Length = 192682

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    aacccgctggtccaatccag 87
             ||||||||||||||||||||
Sbjct: 42044 aacccgctggtccaatccag 42063

---

>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     tgcatcttcaatctgtttca 454
               ||||||||||||||||||||
Sbjct: 3183669 tgcatcttcaatctgtttca 3183688

---

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     tgcatcttcaatctgtttca 454
               ||||||||||||||||||||
Sbjct: 3062671 tgcatcttcaatctgtttca 3062690

---

>emb|AL589645.10| Human DNA sequence from clone RP11-251H13 on chromosome 9, complete
             sequence
          Length = 48323

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   tcacttgctggatcatatgg 299
             ||||||||||||||||||||
Sbjct: 42069 tcacttgctggatcatatgg 42088

---

>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     tgcatcttcaatctgtttca 454
               ||||||||||||||||||||
Sbjct: 2906237 tgcatcttcaatctgtttca 2906256

---

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 567     gagcgcggagttgttcgccg 586
               ||||||||||||||||||||
Sbjct: 2182384 gagcgcggagttgttcgccg 2182365

---

>gb|DQ443526.1| Agrobacterium vitis NADP-me gene, partial cds; AvsR (avsR), AvsI
            (avsI), and hypothetical protein genes, complete cds; and
            hypothetical protein gene, partial cds
          Length = 5445

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 493  ttgcgcagatcaacattgcc 512
            ||||||||||||||||||||
Sbjct: 4592 ttgcgcagatcaacattgcc 4611

---

>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     tgcatcttcaatctgtttca 454
               ||||||||||||||||||||
Sbjct: 2906871 tgcatcttcaatctgtttca 2906890

---

>gb|AC026343.17| Homo sapiens 3 BAC RP11-384F7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168615

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   ggcatgaataatttaatacagata 147
             |||||| |||||||||||||||||
Sbjct: 20545 ggcatgcataatttaatacagata 20522

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    acagatacatggagcaggaa 160
              ||||||||||||||||||||
Sbjct: 404286 acagatacatggagcaggaa 404267

---

>gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome 5, complete sequence
          Length = 229269

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 140    tacagatacatggagcaggaagtc 163
              |||| |||||||||||||||||||
Sbjct: 194644 tacatatacatggagcaggaagtc 194621

---

>gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome 5, complete sequence
          Length = 207846

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 140   tacagatacatggagcaggaagtc 163
             |||| |||||||||||||||||||
Sbjct: 10638 tacatatacatggagcaggaagtc 10615

---

>gb|AC142455.4| Mus musculus BAC clone RP23-179B15 from chromosome 14, complete
             sequence
          Length = 207514

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   aataatttaatacagatacatgga 153
             |||||||||||| |||||||||||
Sbjct: 97536 aataatttaataaagatacatgga 97513

---

>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 295     tatggatggtccttggatgg 314
               ||||||||||||||||||||
Sbjct: 2098945 tatggatggtccttggatgg 2098964

---

>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     tgcatcttcaatctgtttca 454
               ||||||||||||||||||||
Sbjct: 2862541 tgcatcttcaatctgtttca 2862560

---

>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0005A05
          Length = 190834

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    acagatacatggagcaggaa 160
              ||||||||||||||||||||
Sbjct: 156124 acagatacatggagcaggaa 156105

---

>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482C06
          Length = 182779

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   acagatacatggagcaggaa 160
             ||||||||||||||||||||
Sbjct: 44487 acagatacatggagcaggaa 44468

---

>emb|AL929523.5| Zebrafish DNA sequence from clone CH211-250I3, complete sequence
          Length = 133678

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 423    aaattctttaaatgcatcttcaat 446
              ||||||||||||| ||||||||||
Sbjct: 122531 aaattctttaaattcatcttcaat 122554

---

>gb|U29580.1|ECU29580 Escherichia coli K-12 genome; approximately 62 minute region
          Length = 13234

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  tgcatcttcaatctgtttca 454
            ||||||||||||||||||||
Sbjct: 6080 tgcatcttcaatctgtttca 6099

---

>emb|CT030150.14| Mouse DNA sequence from clone RP23-414I13 on chromosome 14, complete
             sequence
          Length = 105716

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 655   atgaaagcaggaatcacagg 674
             ||||||||||||||||||||
Sbjct: 93238 atgaaagcaggaatcacagg 93257

---

>gb|AC145610.4| Mus musculus BAC clone RP24-281O20 from 18, complete sequence
          Length = 182640

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 452   tcactgtggttttgttatccacaa 475
             ||||||| ||||||||||||||||
Sbjct: 52671 tcactgttgttttgttatccacaa 52694

---

>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     tgcatcttcaatctgtttca 454
               ||||||||||||||||||||
Sbjct: 3697912 tgcatcttcaatctgtttca 3697931

---

>dbj|AP005228.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-119P12, complete
              sequence
          Length = 186978

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 448    tgtttcactgtggttttgtt 467
              ||||||||||||||||||||
Sbjct: 170442 tgtttcactgtggttttgtt 170423

---

>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     tgcatcttcaatctgtttca 454
               ||||||||||||||||||||
Sbjct: 3630614 tgcatcttcaatctgtttca 3630633

---

>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     tgcatcttcaatctgtttca 454
               ||||||||||||||||||||
Sbjct: 2764195 tgcatcttcaatctgtttca 2764214

---

>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     tgcatcttcaatctgtttca 454
               ||||||||||||||||||||
Sbjct: 2664928 tgcatcttcaatctgtttca 2664947

---

>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     tgcatcttcaatctgtttca 454
               ||||||||||||||||||||
Sbjct: 3077942 tgcatcttcaatctgtttca 3077961

---

>gb|M12843.1|ECOPYRG E.coli pyrG (complete cds) and eno (partial cds) mRNAs encoding CTP
            synthetase and enolase, respectively
          Length = 2442

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 435  tgcatcttcaatctgtttca 454
            ||||||||||||||||||||
Sbjct: 1802 tgcatcttcaatctgtttca 1783

---

>dbj|AP003496.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1786D2
          Length = 150409

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   ggttttgttatccacaagaa 478
             ||||||||||||||||||||
Sbjct: 68672 ggttttgttatccacaagaa 68653

---

>dbj|AP000874.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-760N9, complete
             sequences
          Length = 150638

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   tgtttcactgtggttttgtt 467
             ||||||||||||||||||||
Sbjct: 43603 tgtttcactgtggttttgtt 43584


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,507,486
Number of Sequences: 3902068
Number of extensions: 6507486
Number of successful extensions: 134690
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134069
Number of HSP's gapped (non-prelim): 618
length of query: 684
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 661
effective length of database: 17,143,297,704
effective search space: 11331719782344
effective search space used: 11331719782344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---