Clone Name	rbah63e18
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	1025	0.0
2	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	1025	0.0
3	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	821	0.0
4	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	345	9e-92
5	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	337	2e-89
6	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	321	1e-84
7	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	224	2e-55
8	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	224	2e-55
9	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	224	2e-55
10	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	224	2e-55
11	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	224	2e-55
12	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	224	2e-55
13	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	224	2e-55
14	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	224	2e-55
15	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	216	6e-53
16	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	216	6e-53
17	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	168	1e-38
18	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	167	5e-38
19	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	167	5e-38
20	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	153	7e-34
21	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	153	7e-34
22	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	151	3e-33
23	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	151	3e-33
24	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	151	3e-33
25	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	151	3e-33
26	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	151	3e-33
27	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	151	3e-33
28	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	151	3e-33
29	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	151	3e-33
30	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	151	3e-33
31	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	151	3e-33
32	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	151	3e-33
33	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	151	3e-33
34	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	147	4e-32
35	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	145	2e-31
36	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	145	2e-31
37	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	145	2e-31
38	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	145	2e-31
39	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	143	7e-31
40	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	143	7e-31
41	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	139	1e-29
42	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	139	1e-29
43	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	129	1e-26
44	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	129	1e-26
45	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	121	2e-24
46	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	121	2e-24
47	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	88	3e-14
48	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	88	3e-14
49	emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat...	78	3e-11
50	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	56	1e-04
51	emb|Y10657.1|CLRCAGENE C.littorale rca gene	54	5e-04
52	gb|DQ123944.1| Coffea arabica x Coffea canephora clone HT-SSH2-H...	48	0.029
53	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	42	1.8
54	gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosom...	42	1.8
55	ref|XM_974982.1| PREDICTED: Mus musculus desmoplakin (Dsp), mRNA	42	1.8
56	ref|XM_912083.2| PREDICTED: Mus musculus desmoplakin, transcript...	42	1.8
57	ref|XM_621314.3| PREDICTED: Mus musculus desmoplakin, transcript...	42	1.8
58	gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, compl...	42	1.8
59	dbj|AK009006.1| Mus musculus adult male tongue cDNA, RIKEN full-...	42	1.8
60	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	42	1.8
61	gb|BC033467.1| Mus musculus desmoplakin, mRNA (cDNA clone IMAGE:...	42	1.8
62	gb|AC161248.2| Mus musculus BAC clone RP24-530L5 from chromosome...	40	7.2
63	gb|BC033474.1| Homo sapiens renin, mRNA (cDNA clone MGC:34221 IM...	40	7.2
64	gb|AY664490.1| Macaca fascicularis renin (REN) mRNA, complete cds	40	7.2
65	gb|BC047752.1| Homo sapiens renin, mRNA (cDNA clone MGC:54147 IM...	40	7.2
66	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	40	7.2
67	gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, com...	40	7.2
68	ref|NM_001032916.1| Macaca mulatta prorenin (REN), mRNA	40	7.2
69	ref|XM_743857.1| Aspergillus fumigatus Af293 hypothetical protei...	40	7.2
70	gb|L00071.1|HUMREN08 Human renin gene, exon 8	40	7.2
71	gb|AC093889.2| Homo sapiens BAC clone RP11-671G14 from 7, comple...	40	7.2
72	ref|NM_000537.2| Homo sapiens renin (REN), mRNA	40	7.2
73	emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chro...	40	7.2
74	gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl...	40	7.2
75	emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in l...	40	7.2
76	emb|X00063.1|HSRENK Human kidney mRNA fragment for renin (aa 105...	40	7.2
77	emb|CR926484.1| Pongo pygmaeus mRNA; cDNA DKFZp469I191 (from clo...	40	7.2
78	emb|CR536498.1| Homo sapiens full open reading frame cDNA clone ...	40	7.2
79	gb|AY436324.1| Homo sapiens renin (REN) gene, complete cds	40	7.2
80	emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ...	40	7.2
81	emb|AJ132342.1|CJA132342 Callithrix jacchus mRNA for preprorenin	40	7.2
82	emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on ch...	40	7.2
83	emb|CR857478.1| Pongo pygmaeus mRNA; cDNA DKFZp469O0929 (from cl...	40	7.2
84	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	40	7.2
85	gb|M10151.1|HUMRENA4 Homo sapiens renin (REN) gene, exons 6, 7, ...	40	7.2
86	gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence	40	7.2
87	gb|AC024259.17| Homo sapiens chromosome 7 clone RP11-105B19, com...	40	7.2
88	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	40	7.2
89	gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosom...	40	7.2
90	gb|AF193454.1|F193446S09 Pan troglodytes renin (REN) gene, exon 8	40	7.2
91	gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, comple...	40	7.2
92	ref|NM_001009122.1| Pan troglodytes renin (REN), mRNA	40	7.2
93	dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ...	40	7.2
94	gb|AY662332.2| Macaca mulatta prorenin (REN) mRNA, complete cds	40	7.2
95	emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 i...	40	7.2
96	gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, comple...	40	7.2
97	emb|CT030164.9| Mouse DNA sequence from clone RP23-311P8 on chro...	40	7.2
98	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	40	7.2
99	emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chro...	40	7.2

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score = 1025 bits (517), Expect = 0.0
 Identities = 526/529 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    aagagacttacaattgggttacctgtgcggcgatgaatcaaaaagtttgagtggatttcg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4164 aagagacttacaattgggttacctgtgcggcgatgaatcaaaaagtttgagtggatttcg 4105

                                                                        
Query: 61   ggtccaaaatagtccaacatatatatagtgcatgcatgcatcttaagtagagtaggacct 120
            |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 4104 ggtccaaaatagtccaacatatatatagtgcatgcatcgatcttaagtagagtaggacct 4045

                                                                        
Query: 121  tctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4044 tctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccg 3985

                                                                        
Query: 181  cctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacca 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3984 cctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacca 3925

                                                                        
Query: 241  gcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3924 gcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcg 3865

                                                                        
Query: 301  gcccctccctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgaccc 360
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3864 gcccctccctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgaccc 3805

                                                                        
Query: 361  acttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggact 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3804 acttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggact 3745

                                                                        
Query: 421  gccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcgga 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3744 gccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcgga 3685

                                                             
Query: 481  agatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3684 agatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 3636



 Score =  105 bits (53), Expect = 1e-19
 Identities = 170/209 (81%)
 Strand = Plus / Minus

                                                                        
Query: 204  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 263
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 7229 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 7170

                                                                        
Query: 264  ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgagg 323
            ||||| |  |||||||| ||||| ||||| ||    ||||| |||| |||||| || || 
Sbjct: 7169 ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 7110

                                                                        
Query: 324  cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 383
            | ||||   |||||||| |  ||| |   ||||||||||||||||||||| |||||||||
Sbjct: 7109 ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtac 7050

                                         
Query: 384  acccgtgcccgcagcgcgccgaagaagtc 412
            ||||| || ||||| || ||||| |||||
Sbjct: 7049 acccgagcacgcagagcaccgaaaaagtc 7021

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score = 1025 bits (517), Expect = 0.0
 Identities = 526/529 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    aagagacttacaattgggttacctgtgcggcgatgaatcaaaaagtttgagtggatttcg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1595 aagagacttacaattgggttacctgtgcggcgatgaatcaaaaagtttgagtggatttcg 1536

                                                                        
Query: 61   ggtccaaaatagtccaacatatatatagtgcatgcatgcatcttaagtagagtaggacct 120
            |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 1535 ggtccaaaatagtccaacatatatatagtgcatgcatcgatcttaagtagagtaggacct 1476

                                                                        
Query: 121  tctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1475 tctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccg 1416

                                                                        
Query: 181  cctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacca 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1415 cctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacca 1356

                                                                        
Query: 241  gcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1355 gcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcg 1296

                                                                        
Query: 301  gcccctccctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgaccc 360
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 gcccctccctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgaccc 1236

                                                                        
Query: 361  acttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggact 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1235 acttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggact 1176

                                                                        
Query: 421  gccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcgga 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 gccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcgga 1116

                                                             
Query: 481  agatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 agatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 1067

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  821 bits (414), Expect = 0.0
 Identities = 507/537 (94%), Gaps = 12/537 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    aagagacttacaattgggttacctgtgcggcgatgaatcaaaaagtttgagtggatttcg 60
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1449 aagagacttacaattgggctacctgtgcggcgatgaatcaaaaagtttgagtggatt-cg 1391

                                                                        
Query: 61   ggtccaaaatagtccaacatatatatagtgcatgcatgca--------tcttaagtagag 112
             |||||||||| |||| |||||||||||||||||||||||        |||||||||   
Sbjct: 1390 agtccaaaatattccagcatatatatagtgcatgcatgcacgcatgcatcttaagta--- 1334

                                                                        
Query: 113  taggaccttctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggcc 172
            |||||| |||||||||||||||||||| ||||||  ||||||||||||||||||||||||
Sbjct: 1333 taggactttctacttgccgtagaaggcgccggtcgccatggcgtcgtcgttggcttggcc 1274

                                                                        
Query: 173  gagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctc 232
            ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 1273 gagcgccgcctcgctgaggtacttgtcggcgagctgcacgcgcttcacgttctcctgctc 1214

                                                                        
Query: 233  ctggaccagcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaa 292
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1213 ctggaccagcatgtggccgtactccatgagcttctcgatggtcatcttgggctggtcgaa 1154

                                                                        
Query: 293  cgtgggcggcccctccctcgagttgacgaggcgcttggagatgttctccacgccgatctc 352
            ||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 1153 cgtcggcggcccctccctggagttgacgagccgcttggagatgttctcgacgccgatctc 1094

                                                                        
Query: 353  gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 412
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1093 gccgacccacttgcgcacctcgtcgtcgtacacccgcgcccgcagcgcgccgaagaagtc 1034

                                                                        
Query: 413  gatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtc 472
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1033 gatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtcggggacgttgtc 974

                                                                     
Query: 473  ggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 973  ggtgcggaagatgcccttgcacacgccgatgcggtcctcccgggtgggcgcccagta 917

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  345 bits (174), Expect = 9e-92
 Identities = 333/386 (86%)
 Strand = Plus / Minus

                                                                       
Query: 144 gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 203
           |||||||||||||| ||||||||||  || || || |||||| ||||||||||||| || 
Sbjct: 908 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 849

                                                                       
Query: 204 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 263
           ||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||||
Sbjct: 848 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 789

                                                                       
Query: 264 ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgagg 323
           ||||| || || ||||||||||| |||||||||||||| |||||| | ||||||||||| 
Sbjct: 788 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 729

                                                                       
Query: 324 cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 383
             | ||| ||||||||| |||||| ||||||  ||||||   || |||||||||||||| 
Sbjct: 728 ttcctggcgatgttctcgacgccggtctcgctcacccaccgtcggacctcgtcgtcgtag 669

                                                                       
Query: 384 acccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 443
           ||||| || ||||||||||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 668 acccgggcacgcagcgcgccgaagaagtcgatggactggccagggaaggtgtcgaccagc 609

                                                                       
Query: 444 ctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatg 503
              || |||  ||| ||   ||||  |||||||||||||||||||||||| |||||||||
Sbjct: 608 tggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgcccttgcagacgccgatg 549

                                     
Query: 504 cggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||||||||||||||
Sbjct: 548 cggtcctcgcgggtgggcgcccagta 523

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  337 bits (170), Expect = 2e-89
 Identities = 332/386 (86%)
 Strand = Plus / Minus

                                                                        
Query: 144  gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 203
            |||||||||||||| ||||||||||  || || || |||||| ||||||||||||| || 
Sbjct: 1303 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 1244

                                                                        
Query: 204  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 263
            ||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||||
Sbjct: 1243 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 1184

                                                                        
Query: 264  ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgagg 323
            ||||| || || ||||||||||| |||||||||||||| |||||| | ||||||||||| 
Sbjct: 1183 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 1124

                                                                        
Query: 324  cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 383
              | ||| ||||||||| |||||| ||||||  ||||||   || |||||||||||||| 
Sbjct: 1123 ttcctggcgatgttctcgacgccggtctcgctcacccaccgtcggacctcgtcgtcgtag 1064

                                                                        
Query: 384  acccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 443
            ||||| || ||||||||||||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 1063 acccgggcacgcagcgcgccgaagaaatcgatggactggccagggaaggtgtcgaccagc 1004

                                                                        
Query: 444  ctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatg 503
               || |||  ||| ||   ||||  |||||||||||||||||||||||| |||||||||
Sbjct: 1003 tggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgcccttgcagacgccgatg 944

                                      
Query: 504  cggtcctcgcgggtgggcgcccagta 529
            ||||||||||||||||||||||||||
Sbjct: 943  cggtcctcgcgggtgggcgcccagta 918

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  321 bits (162), Expect = 1e-84
 Identities = 330/386 (85%)
 Strand = Plus / Minus

                                                                        
Query: 144  gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 203
            |||||||||||||| ||||||||||  || || || |||||| ||||||||||||| || 
Sbjct: 1303 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 1244

                                                                        
Query: 204  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 263
            ||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||||
Sbjct: 1243 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 1184

                                                                        
Query: 264  ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgagg 323
            ||||| || || ||||||||||| |||||||||||||| |||||| | ||||||||||| 
Sbjct: 1183 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 1124

                                                                        
Query: 324  cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 383
              | ||| ||||||||| |||||| ||||||  ||||||   || |||||||||||||| 
Sbjct: 1123 ttcctggcgatgttctcgacgccggtctcgctcacccaccgtcggacctcgtcgtcgtag 1064

                                                                        
Query: 384  acccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 443
            |||   || ||||||||||||||||| ||||||||||| || ||||||||||| ||||||
Sbjct: 1063 accgtggcacgcagcgcgccgaagaaatcgatggactggccggggaaggtgtcgaccagc 1004

                                                                        
Query: 444  ctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatg 503
               || |||  ||| ||   ||||  |||||||||||||||||||||||| |||||||||
Sbjct: 1003 tggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgcccttgcagacgccgatg 944

                                      
Query: 504  cggtcctcgcgggtgggcgcccagta 529
            ||||||||||||||||||||||||||
Sbjct: 943  cggtcctcgcgggtgggcgcccagta 918

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  224 bits (113), Expect = 2e-55
 Identities = 329/401 (82%)
 Strand = Plus / Minus

                                                                        
Query: 129  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250

                                                                        
Query: 189  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190

                                                                        
Query: 249  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1130

                                                                        
Query: 309  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1129 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1070

                                                                        
Query: 369  acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 428
            |||||||||||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct: 1069 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1010

                                                                        
Query: 429  aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 488
            ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| |||
Sbjct: 1009 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 950

                                                     
Query: 489  ttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            ||||| |||||||  ||||| ||||||||||| ||||||||
Sbjct: 949  ttgcagacgccgacacggtcgtcgcgggtgggagcccagta 909

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  224 bits (113), Expect = 2e-55
 Identities = 329/401 (82%)
 Strand = Plus / Minus

                                                                        
Query: 129  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1357 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1298

                                                                        
Query: 189  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1297 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1238

                                                                        
Query: 249  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1237 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1178

                                                                        
Query: 309  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1177 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1118

                                                                        
Query: 369  acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 428
            |||||||||||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct: 1117 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1058

                                                                        
Query: 429  aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 488
            ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| |||
Sbjct: 1057 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 998

                                                     
Query: 489  ttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            ||||| |||||||  ||||| ||||||||||| ||||||||
Sbjct: 997  ttgcagacgccgacacggtcgtcgcgggtgggagcccagta 957

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  224 bits (113), Expect = 2e-55
 Identities = 329/401 (82%)
 Strand = Plus / Minus

                                                                        
Query: 129  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1308 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1249

                                                                        
Query: 189  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1248 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1189

                                                                        
Query: 249  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1188 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1129

                                                                        
Query: 309  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1128 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1069

                                                                        
Query: 369  acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 428
            |||||||||||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct: 1068 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1009

                                                                        
Query: 429  aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 488
            ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| |||
Sbjct: 1008 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 949

                                                     
Query: 489  ttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            ||||| |||||||  ||||| ||||||||||| ||||||||
Sbjct: 948  ttgcagacgccgacacggtcgtcgcgggtgggagcccagta 908

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  224 bits (113), Expect = 2e-55
 Identities = 329/401 (82%)
 Strand = Plus / Minus

                                                                        
Query: 129  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1346 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1287

                                                                        
Query: 189  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1286 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1227

                                                                        
Query: 249  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1226 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1167

                                                                        
Query: 309  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1166 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1107

                                                                        
Query: 369  acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 428
            |||||||||||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct: 1106 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1047

                                                                        
Query: 429  aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 488
            ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| |||
Sbjct: 1046 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 987

                                                     
Query: 489  ttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            ||||| |||||||  ||||| ||||||||||| ||||||||
Sbjct: 986  ttgcagacgccgacacggtcgtcgcgggtgggagcccagta 946

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  224 bits (113), Expect = 2e-55
 Identities = 329/401 (82%)
 Strand = Plus / Minus

                                                                        
Query: 129  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1345 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1286

                                                                        
Query: 189  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1285 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1226

                                                                        
Query: 249  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1225 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1166

                                                                        
Query: 309  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1165 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1106

                                                                        
Query: 369  acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 428
            |||||||||||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct: 1105 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1046

                                                                        
Query: 429  aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 488
            ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| |||
Sbjct: 1045 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 986

                                                     
Query: 489  ttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            ||||| |||||||  ||||| ||||||||||| ||||||||
Sbjct: 985  ttgcagacgccgacacggtcgtcgcgggtgggagcccagta 945

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
            insert sequence
          Length = 1470

 Score =  224 bits (113), Expect = 2e-55
 Identities = 329/401 (82%)
 Strand = Plus / Minus

                                                                        
Query: 129  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1129 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1070

                                                                        
Query: 189  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1069 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1010

                                                                        
Query: 249  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1009 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 950

                                                                        
Query: 309  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 949  ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 890

                                                                        
Query: 369  acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 428
            |||||||||||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct: 889  acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 830

                                                                        
Query: 429  aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 488
            ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| |||
Sbjct: 829  aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 770

                                                     
Query: 489  ttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            ||||| |||||||  ||||| ||||||||||| ||||||||
Sbjct: 769  ttgcagacgccgacacggtcgtcgcgggtgggagcccagta 729

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  224 bits (113), Expect = 2e-55
 Identities = 329/401 (82%)
 Strand = Plus / Minus

                                                                        
Query: 129  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1350 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1291

                                                                        
Query: 189  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1290 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1231

                                                                        
Query: 249  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1230 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1171

                                                                        
Query: 309  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1170 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1111

                                                                        
Query: 369  acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 428
            |||||||||||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct: 1110 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1051

                                                                        
Query: 429  aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 488
            ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| |||
Sbjct: 1050 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 991

                                                     
Query: 489  ttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            ||||| |||||||  ||||| ||||||||||| ||||||||
Sbjct: 990  ttgcagacgccgacacggtcgtcgcgggtgggagcccagta 950

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  224 bits (113), Expect = 2e-55
 Identities = 329/401 (82%)
 Strand = Plus / Minus

                                                                        
Query: 129  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285

                                                                        
Query: 189  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225

                                                                        
Query: 249  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1165

                                                                        
Query: 309  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1164 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1105

                                                                        
Query: 369  acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 428
            |||||||||||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct: 1104 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1045

                                                                        
Query: 429  aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 488
            ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| |||
Sbjct: 1044 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 985

                                                     
Query: 489  ttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            ||||| |||||||  ||||| ||||||||||| ||||||||
Sbjct: 984  ttgcagacgccgacacggtcgtcgcgggtgggagcccagta 944

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  216 bits (109), Expect = 6e-53
 Identities = 328/401 (81%)
 Strand = Plus / Minus

                                                                        
Query: 129  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1314 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1255

                                                                        
Query: 189  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1254 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1195

                                                                        
Query: 249  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
            |||||||| |||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1194 ccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1135

                                                                        
Query: 309  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1134 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1075

                                                                        
Query: 369  acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 428
            |||||||||||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct: 1074 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1015

                                                                        
Query: 429  aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 488
            ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| |||
Sbjct: 1014 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 955

                                                     
Query: 489  ttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            ||||| |||||||  ||||| ||||||||||| ||||||||
Sbjct: 954  ttgcagacgccgacacggtcgtcgcgggtgggagcccagta 914

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  216 bits (109), Expect = 6e-53
 Identities = 328/401 (81%)
 Strand = Plus / Minus

                                                                       
Query: 129 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
           |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 563 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 504

                                                                       
Query: 189 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
           | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 503 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 444

                                                                       
Query: 249 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
           |||||||| |||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 443 ccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 384

                                                                       
Query: 309 ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
           |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 383 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 324

                                                                       
Query: 369 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 428
           |||||||||||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct: 323 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 264

                                                                       
Query: 429 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 488
           ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| |||
Sbjct: 263 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 204

                                                    
Query: 489 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||| |||||||  ||||| ||||||||||| ||||||||
Sbjct: 203 ttgcagacgccgacacggtcgtcgcgggtgggagcccagta 163

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  168 bits (85), Expect = 1e-38
 Identities = 151/173 (87%)
 Strand = Plus / Minus

                                                                        
Query: 357  acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatg 416
            |||||||||||||||||||||||||||||||| || ||||| || |||||||||||||||
Sbjct: 1134 acccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaagaagtcgatg 1075

                                                                        
Query: 417  gactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtg 476
            ||||| || ||||||||||| || | | | || || | ||||||   |||||||||||| 
Sbjct: 1074 gactgtcctgggaaggtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtc 1015

                                                                 
Query: 477  cggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
             ||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1014 tggaagatacccttgcagacgccgatacggtcctcgcgggtgggcgcccagta 962



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 204  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 263
            ||||||||||||||||| || |||||||||||||| |||||||||||||||||||  | |
Sbjct: 1287 agctgcacacgcttgacattgtcctgctcctggacaagcatgtggccgtactccagcaac 1228

                                         
Query: 264  ttctctatggtcatcttgggctggtcgaa 292
            ||||| |  |||||||||||||| |||||
Sbjct: 1227 ttctccaccgtcatcttgggctgctcgaa 1199

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  167 bits (84), Expect = 5e-38
 Identities = 138/156 (88%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||||||||| || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 619 gtcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 560

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 559 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 500

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 499 cacgccgatgcggtcgtcgcgggtgggcgcccagta 464

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  167 bits (84), Expect = 5e-38
 Identities = 138/156 (88%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||||||||| || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 627 gtcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 568

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 567 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 508

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           |||||||||||||||||| |||||||||||||||||
Sbjct: 507 cacgccgatgcggtcctcccgggtgggcgcccagta 472

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  153 bits (77), Expect = 7e-34
 Identities = 212/257 (82%)
 Strand = Plus / Minus

                                                                       
Query: 180 gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 239
           |||||||| |||||||||||||| |||||||| | ||| ||||||||||||||||| |||
Sbjct: 952 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcacc 893

                                                                       
Query: 240 agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 299
           ||||||| |||||||||||  ||||| || | |||||||||||||||  ||||||| |||
Sbjct: 892 agcatgttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 833

                                                                       
Query: 300 ggcccctccctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacc 359
           |||||||||  |||||| || || | ||||   | |   || |||||||| ||| | | |
Sbjct: 832 ggcccctccagcgagttcaccagcctcttgcccacgccgtcgacgccgatttcggcaatc 773

                                                                       
Query: 360 cacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggac 419
           ||||| | ||||||||||||||| ||||  |||| ||| || ||||||||||| ||||| 
Sbjct: 772 cacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatggat 713

                            
Query: 420 tgccccgggaaggtgtc 436
           || || |||||||||||
Sbjct: 712 tggccggggaaggtgtc 696

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  153 bits (77), Expect = 7e-34
 Identities = 212/257 (82%)
 Strand = Plus / Minus

                                                                        
Query: 180  gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 239
            |||||||| |||||||||||||| |||||||| | ||| ||||||||||||||||| |||
Sbjct: 1146 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcacc 1087

                                                                        
Query: 240  agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 299
            ||||||| |||||||||||  ||||| || | |||||||||||||||  ||||||| |||
Sbjct: 1086 agcatgttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 1027

                                                                        
Query: 300  ggcccctccctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacc 359
            |||||||||  |||||| || || | ||||   | |   || |||||||| ||| | | |
Sbjct: 1026 ggcccctccagcgagttcaccagcctcttgcccacgccgtcgacgccgatttcggcaatc 967

                                                                        
Query: 360  cacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggac 419
            ||||| | ||||||||||||||| ||||  |||| ||| || ||||||||||| ||||| 
Sbjct: 966  cacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatggat 907

                             
Query: 420  tgccccgggaaggtgtc 436
            || || |||||||||||
Sbjct: 906  tggccggggaaggtgtc 890

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 637 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 578

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 577 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 518

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 517 cacgccgatgcggtcgtcgcgggtgggcgcccagta 482

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 633 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 574

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 573 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 514

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 513 cacgccgatgcggtcgtcgcgggtgggcgcccagta 478

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagta 480

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagta 480

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 639 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 580

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 579 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 520

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 519 cacgccgatgcggtcgtcgcgggtgggcgcccagta 484

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagta 480

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagta 480

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagta 480

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagta 480

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 637 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 578

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 577 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 518

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 517 cacgccgatgcggtcgtcgcgggtgggcgcccagta 482

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagta 480

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 639 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 580

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  ||||||||||||||||||||||||
Sbjct: 579 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 520

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 519 cacgccgatgcggtcgtcgcgggtgggcgcccagta 484

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  147 bits (74), Expect = 4e-32
 Identities = 148/173 (85%)
 Strand = Plus / Minus

                                                                        
Query: 357  acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatg 416
            |||||||||||||||||  ||||||||||||| || ||||| || |||||||||||||||
Sbjct: 1124 acccacttgcgcacctcaacgtcgtacacccgagcacgcagagcaccgaagaagtcgatg 1065

                                                                        
Query: 417  gactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtg 476
            ||||| || ||||| ||||| || | | | || || | ||||||   |||||||||||| 
Sbjct: 1064 gactgtcctgggaangtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtc 1005

                                                                 
Query: 477  cggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
             ||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1004 tggaagatacccttgcagacgccgatacggtcctcgcgggtgggcgcccagta 952



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 204  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 263
            ||||||||||||||||| || |||||||||||||| |||||||||||||||||||  | |
Sbjct: 1277 agctgcacacgcttgacattgtcctgctcctggacaagcatgtggccgtactccagcaac 1218

                                         
Query: 264  ttctctatggtcatcttgggctggtcgaa 292
            ||||| |  |||||||||||||| |||||
Sbjct: 1217 ttctccaccgtcatcttgggctgctcgaa 1189

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  145 bits (73), Expect = 2e-31
 Identities = 229/281 (81%)
 Strand = Plus / Plus

                                                                          
Query: 129    ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
              |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 108311 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 108370

                                                                          
Query: 189    aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
              | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 108371 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 108430

                                                                          
Query: 249    ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
              ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 108431 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 108490

                                                                          
Query: 309    ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
              |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 108491 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 108550

                                                       
Query: 369    acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaa 409
              |||||||||||||| || || || || || |||||||||||
Sbjct: 108551 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaa 108591



 Score =  109 bits (55), Expect = 9e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Plus

                                                                          
Query: 171    ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 230
              |||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||
Sbjct: 112186 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 112245

                                                                          
Query: 231    tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 286
              |||   ||||||||||    | ||||||||||| ||||| || || ||||||||||||||
Sbjct: 112246 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 112305



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                          
Query: 457    cgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcggg 516
              |||| ||||| |||||| |||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 112435 cgtcggggaccttgtcgctgcggaagatgcccctgcacacgccaatgcggtcctcgcggg 112494

                           
Query: 517    tgggcgcccagta 529
              |||| ||||||||
Sbjct: 112495 tgggagcccagta 112507



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                          
Query: 454    cctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgc 513
              ||||||| ||||||||||||||||||||||| |||||||| |||||||  ||||| ||||
Sbjct: 108728 cctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgtcgc 108787

                              
Query: 514    gggtgggcgcccagta 529
              ||||||| ||||||||
Sbjct: 108788 gggtgggagcccagta 108803



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                          
Query: 332    gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 391
              |||||||||||| ||||||||  | ||||||   |||||||||||| |||||||||| ||
Sbjct: 112344 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 112403

                                        
Query: 392    ccgcagcgcgccgaagaagtcgatgg 417
              ||||||||| ||||||||||||||||
Sbjct: 112404 ccgcagcgccccgaagaagtcgatgg 112429

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  145 bits (73), Expect = 2e-31
 Identities = 229/281 (81%)
 Strand = Plus / Plus

                                                                         
Query: 129   ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
             |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 30188 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 30247

                                                                         
Query: 189   aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
             | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 30248 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 30307

                                                                         
Query: 249   ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
             ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 30308 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 30367

                                                                         
Query: 309   ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
             |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 30368 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 30427

                                                      
Query: 369   acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaa 409
             |||||||||||||| || || || || || |||||||||||
Sbjct: 30428 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaa 30468



 Score =  109 bits (55), Expect = 9e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Plus

                                                                         
Query: 171   ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 230
             |||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||
Sbjct: 34063 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 34122

                                                                         
Query: 231   tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 286
             |||   ||||||||||    | ||||||||||| ||||| || || ||||||||||||||
Sbjct: 34123 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 34182



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                         
Query: 457   cgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcggg 516
             |||| ||||| |||||| |||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 34312 cgtcggggaccttgtcgctgcggaagatgcccctgcacacgccaatgcggtcctcgcggg 34371

                          
Query: 517   tgggcgcccagta 529
             |||| ||||||||
Sbjct: 34372 tgggagcccagta 34384



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                         
Query: 454   cctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgc 513
             ||||||| ||||||||||||||||||||||| |||||||| |||||||  ||||| ||||
Sbjct: 30605 cctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgtcgc 30664

                             
Query: 514   gggtgggcgcccagta 529
             ||||||| ||||||||
Sbjct: 30665 gggtgggagcccagta 30680



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                         
Query: 332   gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 391
             |||||||||||| ||||||||  | ||||||   |||||||||||| |||||||||| ||
Sbjct: 34221 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 34280

                                       
Query: 392   ccgcagcgcgccgaagaagtcgatgg 417
             ||||||||| ||||||||||||||||
Sbjct: 34281 ccgcagcgccccgaagaagtcgatgg 34306

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  145 bits (73), Expect = 2e-31
 Identities = 229/281 (81%)
 Strand = Plus / Plus

                                                                            
Query: 129      ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
                |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 28303450 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 28303509

                                                                            
Query: 189      aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
                | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 28303510 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 28303569

                                                                            
Query: 249      ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
                ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 28303570 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 28303629

                                                                            
Query: 309      ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
                |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 28303630 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 28303689

                                                         
Query: 369      acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaa 409
                |||||||||||||| || || || || || |||||||||||
Sbjct: 28303690 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaa 28303730



 Score =  109 bits (55), Expect = 9e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Plus

                                                                            
Query: 171      ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 230
                |||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||
Sbjct: 28307325 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 28307384

                                                                            
Query: 231      tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 286
                |||   ||||||||||    | ||||||||||| ||||| || || ||||||||||||||
Sbjct: 28307385 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 28307444



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                            
Query: 457      cgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcggg 516
                |||| ||||| |||||| |||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 28307574 cgtcggggaccttgtcgctgcggaagatgcccctgcacacgccaatgcggtcctcgcggg 28307633

                             
Query: 517      tgggcgcccagta 529
                |||| ||||||||
Sbjct: 28307634 tgggagcccagta 28307646



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                            
Query: 454      cctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgc 513
                ||||||| ||||||||||||||||||||||| |||||||| |||||||  ||||| ||||
Sbjct: 28303867 cctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgtcgc 28303926

                                
Query: 514      gggtgggcgcccagta 529
                ||||||| ||||||||
Sbjct: 28303927 gggtgggagcccagta 28303942



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                            
Query: 332      gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 391
                |||||||||||| ||||||||  | ||||||   |||||||||||| |||||||||| ||
Sbjct: 28307483 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 28307542

                                          
Query: 392      ccgcagcgcgccgaagaagtcgatgg 417
                ||||||||| ||||||||||||||||
Sbjct: 28307543 ccgcagcgccccgaagaagtcgatgg 28307568

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  145 bits (73), Expect = 2e-31
 Identities = 229/281 (81%)
 Strand = Plus / Plus

                                                                            
Query: 129      ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 188
                |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 28285899 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 28285958

                                                                            
Query: 189      aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
                | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 28285959 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 28286018

                                                                            
Query: 249      ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 308
                ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 28286019 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 28286078

                                                                            
Query: 309      ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 368
                |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 28286079 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 28286138

                                                         
Query: 369      acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaa 409
                |||||||||||||| || || || || || |||||||||||
Sbjct: 28286139 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaa 28286179



 Score =  109 bits (55), Expect = 9e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Plus

                                                                            
Query: 171      ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 230
                |||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||
Sbjct: 28289774 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 28289833

                                                                            
Query: 231      tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 286
                |||   ||||||||||    | ||||||||||| ||||| || || ||||||||||||||
Sbjct: 28289834 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 28289893



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                            
Query: 457      cgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcggg 516
                |||| ||||| |||||| |||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 28290023 cgtcggggaccttgtcgctgcggaagatgcccctgcacacgccaatgcggtcctcgcggg 28290082

                             
Query: 517      tgggcgcccagta 529
                |||| ||||||||
Sbjct: 28290083 tgggagcccagta 28290095



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                            
Query: 454      cctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgc 513
                ||||||| ||||||||||||||||||||||| |||||||| |||||||  ||||| ||||
Sbjct: 28286316 cctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgtcgc 28286375

                                
Query: 514      gggtgggcgcccagta 529
                ||||||| ||||||||
Sbjct: 28286376 gggtgggagcccagta 28286391



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                            
Query: 332      gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 391
                |||||||||||| ||||||||  | ||||||   |||||||||||| |||||||||| ||
Sbjct: 28289932 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 28289991

                                          
Query: 392      ccgcagcgcgccgaagaagtcgatgg 417
                ||||||||| ||||||||||||||||
Sbjct: 28289992 ccgcagcgccccgaagaagtcgatgg 28290017

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  143 bits (72), Expect = 7e-31
 Identities = 135/156 (86%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 633 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 574

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  |||| |||||||||||||||||||
Sbjct: 573 gtcgacgagctggacgacgtgctcgtcggggacgccgtcgttgcggaagatgcccttgca 514

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 513 cacgccgatgcggtcgtcgcgggtgggcgcccagta 478

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  143 bits (72), Expect = 7e-31
 Identities = 135/156 (86%)
 Strand = Plus / Minus

                                                                       
Query: 374 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 433
           ||||||||| ||||  || || || ||||||||||||||||||||||| |||||||||| 
Sbjct: 633 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 574

                                                                       
Query: 434 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 493
           ||| || |||   || |||  |||||| ||||||  |||| |||||||||||||||||||
Sbjct: 573 gtcgacgagctggacgacgtgctcgtcggggacgccgtcgttgcggaagatgcccttgca 514

                                               
Query: 494 cacgccgatgcggtcctcgcgggtgggcgcccagta 529
           ||||||||||||||| ||||||||||||||||||||
Sbjct: 513 cacgccgatgcggtcgtcgcgggtgggcgcccagta 478

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  139 bits (70), Expect = 1e-29
 Identities = 262/326 (80%)
 Strand = Plus / Minus

                                                                        
Query: 204  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 263
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1346 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1287

                                                                        
Query: 264  ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgagg 323
            ||||| |  |||||||| ||||| ||||| ||    ||||| |||| |||||| || || 
Sbjct: 1286 ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 1227

                                                                        
Query: 324  cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 383
            | ||||   |||||||| |  ||| |   ||||||||||||||||||||| |||||||||
Sbjct: 1226 ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtac 1167

                                                                        
Query: 384  acccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 443
            ||||| || ||||| || ||||| ||||| ||||| || || ||||||||||| || | |
Sbjct: 1166 acccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatc 1107

                                                                        
Query: 444  ctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatg 503
             | || || | ||||||   ||| ||||||||  ||||||| |||||||| || ||||| 
Sbjct: 1106 tttacgacagactcgtcacagacattgtcggtctggaagatacccttgcagacaccgata 1047

                                      
Query: 504  cggtcctcgcgggtgggcgcccagta 529
            ||||| || |||||||| ||||||||
Sbjct: 1046 cggtcgtcacgggtgggagcccagta 1021

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  139 bits (70), Expect = 1e-29
 Identities = 262/326 (80%)
 Strand = Plus / Minus

                                                                        
Query: 204  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 263
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1091 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1032

                                                                        
Query: 264  ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgagg 323
            ||||| |  |||||||| ||||| ||||| ||    ||||| |||| |||||| || || 
Sbjct: 1031 ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 972

                                                                        
Query: 324  cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 383
            | ||||   |||||||| |  ||| |   ||||||||||||||||||||| |||||||||
Sbjct: 971  ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtac 912

                                                                        
Query: 384  acccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 443
            ||||| || ||||| || ||||| ||||| ||||| || || ||||||||||| || | |
Sbjct: 911  acccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatc 852

                                                                        
Query: 444  ctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatg 503
             | || || | ||||||   ||| ||||||||  ||||||| |||||||| || ||||| 
Sbjct: 851  tttacgacagactcgtcacagacattgtcggtctggaagatacccttgcagacaccgata 792

                                      
Query: 504  cggtcctcgcgggtgggcgcccagta 529
            ||||| || |||||||| ||||||||
Sbjct: 791  cggtcgtcacgggtgggagcccagta 766

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  129 bits (65), Expect = 1e-26
 Identities = 146/173 (84%)
 Strand = Plus / Minus

                                                                       
Query: 357 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatg 416
           |||||||||||||||||||||||||||||||| || ||||| || ||||| |||||||||
Sbjct: 263 acccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtcgatg 204

                                                                       
Query: 417 gactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtg 476
           || || || ||||||||||| || | | | || |||| ||||||   ||| |||||||| 
Sbjct: 203 gattgtcctgggaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtcggtc 144

                                                                
Query: 477 cggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
            ||||||| |||||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 143 tggaagatacccttgcagacaccgatacggtcgtcgcgggtgggagcccagta 91



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 204 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 263
           ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 416 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 357

                                  
Query: 264 ttctctatggtcatcttgggctg 286
           ||||| |  |||||||| |||||
Sbjct: 356 ttctccactgtcatctttggctg 334

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  129 bits (65), Expect = 1e-26
 Identities = 146/173 (84%)
 Strand = Plus / Minus

                                                                        
Query: 357  acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatg 416
            |||||||||||||||||||||||||||||||| || ||||| || ||||| |||||||||
Sbjct: 1113 acccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtcgatg 1054

                                                                        
Query: 417  gactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtg 476
            || || || ||||||||||| || | | | || |||| ||||||   ||| |||||||| 
Sbjct: 1053 gattgtcctgggaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtcggtc 994

                                                                 
Query: 477  cggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagta 529
             ||||||| |||||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 993  tggaagatacccttgcagacaccgatacggtcgtcgcgggtgggagcccagta 941



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                        
Query: 204  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 263
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1266 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1207

                                   
Query: 264  ttctctatggtcatcttgggctg 286
            ||||| |  |||||||| |||||
Sbjct: 1206 ttctccactgtcatctttggctg 1184

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  121 bits (61), Expect = 2e-24
 Identities = 112/129 (86%)
 Strand = Plus / Minus

                                                                        
Query: 180  gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 239
            |||||||| |||||||||||||| |||||||| | ||| ||||||||||| ||||| |||
Sbjct: 1253 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcacc 1194

                                                                        
Query: 240  agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 299
            ||||| | |||||||||||  ||||| || | |||||||||||||||  ||||||| |||
Sbjct: 1193 agcatattgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 1134

                     
Query: 300  ggcccctcc 308
            |||||||||
Sbjct: 1133 ggcccctcc 1125



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                        
Query: 342  acgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcg 401
            |||||||| ||| | | |||||| | ||||||||||||||| ||||  |||| ||| || 
Sbjct: 1091 acgccgatttcggcaatccacttcctcacctcgtcgtcgtagaccctcgccctcagtgca 1032

                                               
Query: 402  ccgaagaagtcgatggactgccccgggaaggtgtc 436
            ||||||||||| ||||| || || |||||||||||
Sbjct: 1031 ccgaagaagtcaatggattggccggggaaggtgtc 997

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  121 bits (61), Expect = 2e-24
 Identities = 112/129 (86%)
 Strand = Plus / Minus

                                                                        
Query: 180  gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 239
            |||||||| |||||||||||||| |||||||| | ||| ||||||||||| ||||| |||
Sbjct: 1116 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcacc 1057

                                                                        
Query: 240  agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 299
            ||||| | |||||||||||  ||||| || | |||||||||||||||  ||||||| |||
Sbjct: 1056 agcatattgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 997

                     
Query: 300  ggcccctcc 308
            |||||||||
Sbjct: 996  ggcccctcc 988



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 342 acgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcg 401
           |||||||| ||| | | |||||| | ||||||||||||||| ||||  |||| ||| || 
Sbjct: 954 acgccgatttcggcaatccacttcctcacctcgtcgtcgtagaccctcgccctcagtgca 895

                                              
Query: 402 ccgaagaagtcgatggactgccccgggaaggtgtc 436
           ||||||||||| ||||| || || |||||||||||
Sbjct: 894 ccgaagaagtcaatggattggccggggaaggtgtc 860

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                        
Query: 359  ccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatgga 418
            ||||| |||||||  |||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 2739 ccactggcgcaccatgtcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatgga 2680

                                    
Query: 419  ctgccccgggaaggtgtccaccag 442
            ||| || |||||||||||||||||
Sbjct: 2679 ctggccggggaaggtgtccaccag 2656



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                       
Query: 478  ggaagatgcccttgcacacgccgatgcggtcctcgcgggtggg 520
            ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2370 ggaagatgcccatgcacacgccgatgcggtcctcgcgggtggg 2328



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 198  tcggcgagctgcacacgcttgacgttctcctgctc 232
            ||||| |||||||| ||||||||||||||||||||
Sbjct: 3239 tcggccagctgcacgcgcttgacgttctcctgctc 3205

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
            activase mRNA, complete cds
          Length = 1693

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                        
Query: 359  ccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatgga 418
            ||||| |||||||  |||||||||||| || || ||||| |||||||||||||| |||||
Sbjct: 1049 ccactggcgcaccatgtcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatgga 990

                                    
Query: 419  ctgccccgggaaggtgtccaccag 442
            ||| || |||||||||||||||||
Sbjct: 989  ctggccggggaaggtgtccaccag 966



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                      
Query: 478 ggaagatgcccttgcacacgccgatgcggtcctcgcgggtggg 520
           ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 930 ggaagatgcccatgcacacgccgatgcggtcctcgcgggtggg 888



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 198  tcggcgagctgcacacgcttgacgttctcctgctc 232
            ||||| |||||||| ||||||||||||||||||||
Sbjct: 1207 tcggccagctgcacgcgcttgacgttctcctgctc 1173

---

>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 204 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 263
           ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 210 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 151

                                  
Query: 264 ttctctatggtcatcttgggctg 286
           ||||| |  |||||||| |||||
Sbjct: 150 ttctcgactgtcatctttggctg 128



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 357 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 412
           |||||||||||||||||||||||||||||||| || ||||| || ||||| |||||
Sbjct: 57  acccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtc 2

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 215  cttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttctctatggt 274
            |||||||||||||||||||||||| ||||||   |||||  | | |||||| || || ||
Sbjct: 1293 cttgacgttctcctgctcctggacaagcatgcctccgtagccaaggagcttatcaattgt 1234

                        
Query: 275  catcttgggctg 286
            ||||||||||||
Sbjct: 1233 catcttgggctg 1222

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 478  ggaagatgcccttgcacacgccgatgcggtcctcgcgggtggg 520
            ||||||| ||| |||| ||||||||||||||||| ||||||||
Sbjct: 1859 ggaagattcccatgcagacgccgatgcggtcctcacgggtggg 1817



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 201  gcgagctgcacacgcttgacgttctcctgctc 232
            ||||||||||| |||||||| |||||||||||
Sbjct: 2136 gcgagctgcacgcgcttgacattctcctgctc 2105



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 402  ccgaagaagtcgatggactgccccgggaagg 432
            |||||||||||||| |||||||| |||||||
Sbjct: 1935 ccgaagaagtcgatcgactgcccggggaagg 1905

---

>gb|DQ123944.1| Coffea arabica x Coffea canephora clone HT-SSH2-H08 mRNA sequence
          Length = 488

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 219 acgttctcctgctcctggaccagcatgtggccgtac 254
           |||||||||||||| ||||| ||||||| |||||||
Sbjct: 36  acgttctcctgctcttggacgagcatgttgccgtac 1

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 372 tcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaag 431
           ||||| ||||| ||||| |||| ||  || |||||||| |||||||| || || ||||||
Sbjct: 950 tcgtcatcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaag 891

                
Query: 432 gtgtc 436
           |||||
Sbjct: 890 gtgtc 886

---

>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete sequence
          Length = 192473

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 214    gcttgacgttctcctgctcctggaccagc 242
              ||||||| |||||||| ||||||||||||
Sbjct: 170620 gcttgacattctcctgttcctggaccagc 170592

---

>ref|XM_974982.1| PREDICTED: Mus musculus desmoplakin (Dsp), mRNA
          Length = 8280

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 214  gcttgacgttctcctgctcctggaccagc 242
            ||||||| |||||||| ||||||||||||
Sbjct: 4777 gcttgacattctcctgttcctggaccagc 4749

---

>ref|XM_912083.2| PREDICTED: Mus musculus desmoplakin, transcript variant 3 (Dsp), mRNA
          Length = 8583

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 214  gcttgacgttctcctgctcctggaccagc 242
            ||||||| |||||||| ||||||||||||
Sbjct: 4996 gcttgacattctcctgttcctggaccagc 4968

---

>ref|XM_621314.3| PREDICTED: Mus musculus desmoplakin, transcript variant 1 (Dsp), mRNA
          Length = 9592

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 214  gcttgacgttctcctgctcctggaccagc 242
            ||||||| |||||||| ||||||||||||
Sbjct: 5360 gcttgacattctcctgttcctggaccagc 5332

---

>gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, complete sequence
          Length = 199240

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 214   gcttgacgttctcctgctcctggaccagc 242
             ||||||| |||||||| ||||||||||||
Sbjct: 40085 gcttgacattctcctgttcctggaccagc 40057

---

>dbj|AK009006.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2300002E22 product:desmoplakin, full
           insert sequence
          Length = 1423

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 214 gcttgacgttctcctgctcctggaccagc 242
           ||||||| |||||||| ||||||||||||
Sbjct: 803 gcttgacattctcctgttcctggaccagc 775

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 372 tcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaag 431
           ||||| ||||| ||||| |||| ||  || |||||||| |||||||| || || ||||||
Sbjct: 951 tcgtcatcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaag 892

                
Query: 432 gtgtc 436
           |||||
Sbjct: 891 gtgtc 887

---

>gb|BC033467.1| Mus musculus desmoplakin, mRNA (cDNA clone IMAGE:4949004)
          Length = 2915

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 214  gcttgacgttctcctgctcctggaccagc 242
            ||||||| |||||||| ||||||||||||
Sbjct: 2607 gcttgacattctcctgttcctggaccagc 2579

---

>gb|AC161248.2| Mus musculus BAC clone RP24-530L5 from chromosome 12, complete sequence
          Length = 155861

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 431    ggtgtccaccagcctcacca 450
              ||||||||||||||||||||
Sbjct: 136818 ggtgtccaccagcctcacca 136799

---

>gb|BC033474.1| Homo sapiens renin, mRNA (cDNA clone MGC:34221 IMAGE:5188566),
           complete cds
          Length = 1475

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 956 ctccatgagcttctctatgg 937

---

>gb|AY664490.1| Macaca fascicularis renin (REN) mRNA, complete cds
          Length = 1280

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 989 ctccatgagcttctctatgg 970

---

>gb|BC047752.1| Homo sapiens renin, mRNA (cDNA clone MGC:54147 IMAGE:5590211),
           complete cds
          Length = 1471

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 959 ctccatgagcttctctatgg 940

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                        
Query: 189  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 248
            ||||||||||| || | ||| || | ||| || ||||| ||||| || || ||||||| |
Sbjct: 1332 aggtacttgtcagctaactgaactctcttaacattctcttgctcttgaacaagcatgttg 1273

                                            
Query: 249  ccgtactccatgagcttctctatggtcatctt 280
            |||||||| | |||||| || || ||||||||
Sbjct: 1272 ccgtactcgaggagcttatcgatagtcatctt 1241

---

>gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, complete sequence
          Length = 162020

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 78     catatatatagtgcatgcatgcat 101
              ||||| ||||||||||||||||||
Sbjct: 122744 catatgtatagtgcatgcatgcat 122721

---

>ref|NM_001032916.1| Macaca mulatta prorenin (REN), mRNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 974 ctccatgagcttctctatgg 955

---

>ref|XM_743857.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g05590)
           partial mRNA
          Length = 720

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 249 ccgtactccatgagcttctc 268
           ||||||||||||||||||||
Sbjct: 212 ccgtactccatgagcttctc 193

---

>gb|L00071.1|HUMREN08 Human renin gene, exon 8
          Length = 172

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 124 ctccatgagcttctctatgg 105

---

>gb|AC093889.2| Homo sapiens BAC clone RP11-671G14 from 7, complete sequence
          Length = 198453

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    catatatatagtgcatgcat 97
             ||||||||||||||||||||
Sbjct: 31511 catatatatagtgcatgcat 31492

---

>ref|NM_000537.2| Homo sapiens renin (REN), mRNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 974 ctccatgagcttctctatgg 955

---

>emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chromosome 1 Contains the
             SOX13 gene for SOX13   SRY (sex determining region Y)-box
             13, two novel genes, a novel gene (FLJ10761), the 3' end
             of the REN gene for renin and two CpG islands, complete
             sequence
          Length = 101862

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   ctccatgagcttctctatgg 273
             ||||||||||||||||||||
Sbjct: 95051 ctccatgagcttctctatgg 95070

---

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 385     cccgtgcccgcagcgcgccg 404
               ||||||||||||||||||||
Sbjct: 2456174 cccgtgcccgcagcgcgccg 2456155

---

>emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in linkage group 19,
             complete sequence
          Length = 187377

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    tatatagtgcatgcatgcat 101
             ||||||||||||||||||||
Sbjct: 65570 tatatagtgcatgcatgcat 65551

---

>emb|X00063.1|HSRENK Human kidney mRNA fragment for renin (aa 105-401)
          Length = 1096

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 609 ctccatgagcttctctatgg 590

---

>emb|CR926484.1| Pongo pygmaeus mRNA; cDNA DKFZp469I191 (from clone DKFZp469I191)
          Length = 1474

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 974 ctccatgagcttctctatgg 955

---

>emb|CR536498.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0620D for
           gene REN, renin; complete cds, incl. stopcodon
          Length = 1221

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 930 ctccatgagcttctctatgg 911

---

>gb|AY436324.1| Homo sapiens renin (REN) gene, complete cds
          Length = 14148

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   ctccatgagcttctctatgg 273
             ||||||||||||||||||||
Sbjct: 11638 ctccatgagcttctctatgg 11619

---

>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   ccacggcctcgtccgggacg 467
             ||||||||||||||||||||
Sbjct: 20046 ccacggcctcgtccgggacg 20027

---

>emb|AJ132342.1|CJA132342 Callithrix jacchus mRNA for preprorenin
          Length = 1203

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 912 ctccatgagcttctctatgg 893

---

>emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on chromosome 13 Contains the
              3' end of the Csh1 gene for chorionic somatomammotropin
              hormone 1,  two genes for novel proteins similar to
              chorionic somatomammotropin hormone 1 (Csh1), the Prlpi
              gene for prolactin-like protein I (Prlpj, decidualin), the
              Csh2 gene for chorionic somatomammotropin hormone 2, the
              gene for protein 1600016E11RIK similar to prolactin and a
              novel gene (4930511O05Rik), complete sequence
          Length = 207737

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 67     aaatagtccaacatatatatagtg 90
              ||||||||||| ||||||||||||
Sbjct: 162426 aaatagtccaaaatatatatagtg 162403

---

>emb|CR857478.1| Pongo pygmaeus mRNA; cDNA DKFZp469O0929 (from clone DKFZp469O0929)
          Length = 2747

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 ggtgtccaccagcctcacca 450
           ||||||||||||||||||||
Sbjct: 224 ggtgtccaccagcctcacca 243

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 249 ccgtactccatgagcttctctatggtcatctt 280
           |||||||| | ||||||||| |||||||||||
Sbjct: 495 ccgtactcgaggagcttctcaatggtcatctt 464

---

>gb|M10151.1|HUMRENA4 Homo sapiens renin (REN) gene, exons 6, 7, 8, and 9
          Length = 3057

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 254  ctccatgagcttctctatgg 273
            ||||||||||||||||||||
Sbjct: 2172 ctccatgagcttctctatgg 2153

---

>gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence
          Length = 36615

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 454   cctcgtccgggacgttgtcg 473
             ||||||||||||||||||||
Sbjct: 34609 cctcgtccgggacgttgtcg 34590

---

>gb|AC024259.17| Homo sapiens chromosome 7 clone RP11-105B19, complete sequence
          Length = 177303

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    catatatatagtgcatgcat 97
             ||||||||||||||||||||
Sbjct: 68633 catatatatagtgcatgcat 68652

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 341     cacgccgatctcgccgaccc 360
               ||||||||||||||||||||
Sbjct: 2558497 cacgccgatctcgccgaccc 2558516

---

>gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosome 13, complete
           sequence
          Length = 146998

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  aacatatatatagtgcatgc 95
           ||||||||||||||||||||
Sbjct: 109 aacatatatatagtgcatgc 90

---

>gb|AF193454.1|F193446S09 Pan troglodytes renin (REN) gene, exon 8
          Length = 142

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 112 ctccatgagcttctctatgg 93

---

>gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, complete sequence
          Length = 157544

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 77     acatatatatagtgcatgcatgca 100
              ||||||||||||| ||||||||||
Sbjct: 121059 acatatatatagtacatgcatgca 121036

---

>ref|NM_001009122.1| Pan troglodytes renin (REN), mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 930 ctccatgagcttctctatgg 911

---

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 398     cgcgccgaagaagtcgatgg 417
               ||||||||||||||||||||
Sbjct: 2367826 cgcgccgaagaagtcgatgg 2367845



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 398    cgcgccgaagaagtcgatgg 417
              ||||||||||||||||||||
Sbjct: 425250 cgcgccgaagaagtcgatgg 425231

---

>gb|AY662332.2| Macaca mulatta prorenin (REN) mRNA, complete cds
          Length = 1461

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ctccatgagcttctctatgg 273
           ||||||||||||||||||||
Sbjct: 974 ctccatgagcttctctatgg 955

---

>emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 in linkage group 20,
             complete sequence
          Length = 170767

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 259   tgagcttctctatggtcatcttgg 282
             |||||||||| |||||||||||||
Sbjct: 59941 tgagcttctcaatggtcatcttgg 59964

---

>gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, complete sequence
          Length = 151468

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    aacatatatatagtgcatgc 95
             ||||||||||||||||||||
Sbjct: 19290 aacatatatatagtgcatgc 19309

---

>emb|CT030164.9| Mouse DNA sequence from clone RP23-311P8 on chromosome 12, complete
             sequence
          Length = 224188

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 431   ggtgtccaccagcctcacca 450
             ||||||||||||||||||||
Sbjct: 69683 ggtgtccaccagcctcacca 69664

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds
          Length = 1674

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 249  ccgtactccatgagcttctctatggtcatctt 280
            |||||||| | ||||||||| |||||||||||
Sbjct: 1255 ccgtactcgaggagcttctcaatggtcatctt 1224

---

>emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chromosome X, complete
             sequence
          Length = 175802

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    tgcatgcatgcatcttaagt 108
             ||||||||||||||||||||
Sbjct: 22325 tgcatgcatgcatcttaagt 22306


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,703,890
Number of Sequences: 3902068
Number of extensions: 3703890
Number of successful extensions: 71744
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71052
Number of HSP's gapped (non-prelim): 643
length of query: 529
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 506
effective length of database: 17,143,297,704
effective search space: 8674508638224
effective search space used: 8674508638224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---