ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63f09 |
|---|---|
| Clone Library Name | barley_pub |
>CATB_RAT (P00787) Cathepsin B precursor (EC 3.4.22.1) (Cathepsin B1) (RSG-2)| [Contains: Cathepsin B light chain; Cathepsin B heavy chain] Length = 339 Score = 35.4 bits (80), Expect = 0.037 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAGMP 233 FKI+RG N CGIE ++ AG+P Sbjct: 310 FKILRGENHCGIESEIVAGIP 330
>CATB_MOUSE (P10605) Cathepsin B precursor (EC 3.4.22.1) (Cathepsin B1)| [Contains: Cathepsin B light chain; Cathepsin B heavy chain] Length = 339 Score = 35.4 bits (80), Expect = 0.037 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAGMP 233 FKI+RG N CGIE ++ AG+P Sbjct: 310 FKILRGENHCGIESEIVAGIP 330
>CPR5_CAEEL (P43509) Cathepsin B-like cysteine proteinase 5 precursor (EC| 3.4.22.-) (Cysteine protease-related 5) Length = 344 Score = 35.4 bits (80), Expect = 0.037 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAGMPSM 227 F+IIRG NECGIE AG+P + Sbjct: 318 FRIIRGLNECGIEHSAVAGIPDL 340
>CATB_CHICK (P43233) Cathepsin B precursor (EC 3.4.22.1) (Cathepsin B1)| [Contains: Cathepsin B light chain; Cathepsin B heavy chain] Length = 340 Score = 35.0 bits (79), Expect = 0.049 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAGMPSM 227 FKI+RG + CGIE ++ AG+P M Sbjct: 311 FKILRGEDHCGIESEIVAGVPRM 333
>CATB_BOVIN (P07688) Cathepsin B precursor (EC 3.4.22.1) [Contains: Cathepsin B| light chain; Cathepsin B heavy chain] Length = 335 Score = 35.0 bits (79), Expect = 0.049 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAGMP 233 FKI+RG + CGIE ++ AGMP Sbjct: 310 FKILRGQDHCGIESEIVAGMP 330
>CPR4_CAEEL (P43508) Cathepsin B-like cysteine proteinase 4 precursor (EC| 3.4.22.-) (Cysteine protease-related 4) Length = 335 Score = 34.7 bits (78), Expect = 0.063 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAGMPSM 227 F+IIRG NECGIE V G+P + Sbjct: 313 FRIIRGTNECGIEHAVVGGVPKV 335
>CATB_HUMAN (P07858) Cathepsin B precursor (EC 3.4.22.1) (Cathepsin B1) (APP| secretase) (APPS) [Contains: Cathepsin B light chain; Cathepsin B heavy chain] Length = 339 Score = 33.9 bits (76), Expect = 0.11 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAGMP 233 FKI+RG + CGIE +V AG+P Sbjct: 310 FKILRGQDHCGIESEVVAGIP 330
>CPR6_CAEEL (P43510) Cathepsin B-like cysteine proteinase 6 precursor (EC| 3.4.22.-) (Cysteine protease-related 6) Length = 379 Score = 33.5 bits (75), Expect = 0.14 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAGMPSMXNI 218 F+I+RG +ECGIE V G+P + ++ Sbjct: 337 FRILRGVDECGIESGVVGGIPKLNSL 362
>CYSP1_HAECO (P19092) Cathepsin B-like cysteine proteinase 1 precursor (EC| 3.4.22.-) Length = 342 Score = 32.0 bits (71), Expect = 0.41 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAGM 236 F+IIRG N+CGIE + AG+ Sbjct: 317 FRIIRGTNDCGIEGTIAAGI 336
>CYSP2_HAECO (P25793) Cathepsin B-like cysteine proteinase 2 precursor (EC| 3.4.22.-) Length = 342 Score = 31.6 bits (70), Expect = 0.54 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAGM 236 F+I+RG N+CGIE + AG+ Sbjct: 317 FRIVRGSNDCGIEGTIAAGI 336
>CYSP_SCHJA (P43157) Cathepsin B-like cysteine proteinase precursor (EC| 3.4.22.-) (Antigen Sj31) Length = 342 Score = 30.8 bits (68), Expect = 0.92 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAGM 236 F+++RG +EC IE DV AG+ Sbjct: 320 FRMVRGRDECSIESDVVAGL 339
>CPR3_CAEEL (P43507) Cathepsin B-like cysteine proteinase 3 precursor (EC| 3.4.22.-) (Cysteine protease-related 3) Length = 370 Score = 30.0 bits (66), Expect = 1.6 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAGMPSM 227 FKI RG NEC IE +V AG+ + Sbjct: 316 FKIRRGTNECQIEGNVVAGIAKL 338
>CYSP_SCHMA (P25792) Cathepsin B-like cysteine proteinase precursor (EC| 3.4.22.-) (Antigen Sm31) Length = 340 Score = 29.3 bits (64), Expect = 2.7 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAG 239 F+I+RG +EC IE +V AG Sbjct: 319 FRIVRGRDECSIESEVIAG 337
>CPR1_CAEEL (P25807) Gut-specific cysteine proteinase precursor (EC 3.4.22.-)| Length = 329 Score = 28.9 bits (63), Expect = 3.5 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAG 239 FKI RG ++CGIE V AG Sbjct: 307 FKIYRGDDQCGIESAVVAG 325
>CATB3_GIALA (P92133) Cathepsin B-like CP3 precursor (EC 3.4.22.-) (Cathepsin| B-like protease B3) Length = 299 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = -2 Query: 295 FKIIRGXNECGIEXDVTAG 239 F+IIR NECGIE V G Sbjct: 277 FRIIRMTNECGIEEQVIGG 295 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,002,488 Number of Sequences: 219361 Number of extensions: 552718 Number of successful extensions: 793 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 789 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 793 length of database: 80,573,946 effective HSP length: 74 effective length of database: 64,341,232 effective search space used: 1544189568 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
