ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbasdn05 | 570 | AV928545 | not_full | gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds; nuclear gene for chloroplast product Length = 481 | 347 | not_full | PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 140 | 20 | -- | --- | - | -- | --- | - |
| rbasdn04 | 574 | AV928544 | not_full | gb|BT016392.1| Zea mays clone Contig225 mRNA sequence Length = 958 | 75 | not_full | TREF1_MOUSE (Q8BXJ2) Transcriptional-regulating factor 1 (Transcriptional-regulating protein 132) (Zinc finger transcription factor TReP-132) Length = 1205 | 6 | -- | --- | - | -- | --- | - |
| rbasdn02 | 639 | AV928543 | not_full | gb|AY107437.1| Zea mays PCO062669 mRNA sequence Length = 1217 | 34 | not_full | Y1792_ARCFU (O28482) Hypothetical protein AF1792 Length = 137 | 3 | -- | --- | - | -- | --- | - |
| rbasdn01 | 688 | AV928542 | not_full | gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 | 19 | not_full | TCNA_TRYCR (P23253) Sialidase (EC 3.2.1.18) (Neuraminidase) (NA) (Major surface antigen) Length = 1162 | 46 | -- | --- | - | -- | --- | - |
| rbasdm24 | 721 | AV928541 | not_full | emb|X56782.1|TA1B38 T.aestivum 1b-c38 gene for HBP-1b (leucine zipper type transcription factor) Length = 2204 | 138 | not_full | HBP1B_WHEAT (P23923) Transcription factor HBP-1b(c38) Length = 332 | 11 | -- | --- | - | -- | --- | - |
| rbasdm23 | 724 | AV928540 | not_full | gb|AY104403.1| Zea mays PCO068697 mRNA sequence Length = 2273 | 84 | not_full | ACOC_ARATH (Q42560) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) Length = 898 | 159 | -- | --- | - | -- | --- | - |
| rbasdm22 | 565 | AV928539 | not_full | ref|NM_196093.1| Oryza sativa (japonica cultivar-group) putative clathrin assembly protein (OSJNBa0083M08.3), mRNA Length = 622 | 160 | not_full | AP4S1_HUMAN (Q9Y587) AP-4 complex subunit sigma-1 (Adapter-related protein complex 4 sigma-1 subunit) (Sigma subunit of AP-4) (AP-4 adapter complex sigma subunit) Length = 144 | 32 | -- | --- | - | -- | --- | - |
| rbasdm20 | 459 | AV928538 | not_full | gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 | 119 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 29 | -- | --- | - | -- | --- | - |
| rbasdm19 | 685 | AV928537 | not_full | gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 | 192 | not_full | BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 | 500 | -- | --- | - | -- | --- | - |
| rbasdm18 | 767 | AV928536 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdm16 | 501 | AV928535 | not_full | emb|Z50789.1|HVEF1ALFA H.vulgare mRNA for elongation factor 1-alpha Length = 1609 | 500 | not_full | EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 132 | -- | --- | - | -- | --- | - |
| rbasdm15 | 686 | AV928534 | not_full | emb|Z50789.1|HVEF1ALFA H.vulgare mRNA for elongation factor 1-alpha Length = 1609 | 500 | not_full | EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 135 | -- | --- | - | -- | --- | - |
| rbasdm14 | 653 | AV928533 | not_full | dbj|AB044747.1| Phyllostachys edulis BA-ACO mRNA for 1-aminocyclopropane-1-carboxylate oxidase, complete cds Length = 1375 | 500 | not_full | ACCO1_ORYSA (Q40634) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) Length = 322 | 85 | -- | --- | - | -- | --- | - |
| rbasdm12 | 718 | AV928532 | not_full | dbj|AK069278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012E10, full insert sequence Length = 1271 | 92 | not_full | YCBX_ECOLI (P75863) Hypothetical protein ycbX Length = 369 | 8 | -- | --- | - | -- | --- | - |
| rbasdm11 | 753 | AV928531 | not_full | dbj|AK061199.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-A04, full insert sequence Length = 1055 | 24 | not_full | SYGM1_ARATH (O23627) Glycyl-tRNA synthetase 1, mitochondrial precursor (EC 6.1.1.14) (Glycine--tRNA ligase 1) (GlyRS 1) Length = 729 | 109 | -- | --- | - | -- | --- | - |
| rbasdm10 | 479 | AV928530 | not_full | gb|AY107575.1| Zea mays PCO083849 mRNA sequence Length = 727 | 500 | not_full | KRA94_HUMAN (Q9BYQ2) Keratin-associated protein 9-4 (Keratin-associated protein 9.4) (Ultrahigh sulfur keratin-associated protein 9.4) Length = 154 | 36 | -- | --- | - | -- | --- | - |
| rbasdm09 | 510 | AV928529 | not_full | dbj|AK104570.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G06, full insert sequence Length = 1096 | 41 | not_full | FILA_MOUSE (P11088) Filaggrin (Fragment) Length = 336 | 3 | -- | --- | - | -- | --- | - |
| rbasdm07 | 669 | AV928528 | not_full | ref|NM_187721.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 | 143 | not_full | NEC1_NICLS (Q94EG3) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) Length = 229 | 107 | -- | --- | - | -- | --- | - |
| rbasdm05 | 352 | AV928527 | not_full | emb|AJ001160.1|HVJ001160 Hordeum vulgare L41 ribosomal protein Length = 387 | 331 | not_full | TF2L1_MOUSE (Q3UNW5) Transcription factor CP2-like protein 1 (CP2-related transcriptional repressor-1) (CRTR-1) Length = 478 | 2 | -- | --- | - | -- | --- | - |
| rbasdm04 | 591 | AV928526 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 93 | not_full | CWLO_BACLD (Q65NQ9) Peptidoglycan DL-endopeptidase cwlO precursor (EC 3.4.-.-) (D-gamma-glutamyl-meso-diaminopimelyl DL-endopeptidase) Length = 452 | 31 | -- | --- | - | -- | --- | - |
| rbasdm03 | 728 | AV928525 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 98 | not_full | CWLO_BACLD (Q65NQ9) Peptidoglycan DL-endopeptidase cwlO precursor (EC 3.4.-.-) (D-gamma-glutamyl-meso-diaminopimelyl DL-endopeptidase) Length = 452 | 23 | -- | --- | - | -- | --- | - |
| rbasdm02 | 594 | AV928524 | not_full | emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 | 500 | not_full | CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor (LHCII type I CAB-3C) (LHCP) Length = 267 | 132 | -- | --- | - | -- | --- | - |
| rbasdm01 | 736 | AV928523 | not_full | gb|AY065971.1| Triticum aestivum phosphoethanolamine methyltransferase mRNA, complete cds Length = 1782 | 47 | not_full | PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransferase 2 (EC 2.1.1.103) Length = 475 | 100 | -- | --- | - | -- | --- | - |
| rbasdl24 | 608 | AV928522 | not_full | ref|NM_192107.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 | 80 | not_full | PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1054 | 57 | -- | --- | - | -- | --- | - |
| rbasdl23 | 480 | AV928521 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 25 | not_full | STRH_STRPN (P49610) Beta-N-acetylhexosaminidase precursor (EC 3.2.1.52) Length = 1312 | 13 | -- | --- | - | -- | --- | - |
| rbasdl22 | 694 | AV928520 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdl21 | 662 | AV928519 | not_full | ref|XM_476027.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1425 | 67 | not_full | VPE_CITSI (P49043) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE) Length = 494 | 22 | -- | --- | - | -- | --- | - |
| rbasdl20 | 613 | AV928518 | not_full | emb|Z50789.1|HVEF1ALFA H.vulgare mRNA for elongation factor 1-alpha Length = 1609 | 500 | not_full | EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 243 | -- | --- | - | -- | --- | - |
| rbasdl19 | 729 | AV928517 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdl17 | 751 | AV928516 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdl16 | 609 | AV836868 | not_full | ref|NM_187453.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1248 | 58 | not_full | Y1607_METJA (Q59002) Hypothetical glycosyl transferase MJ1607 (EC 2.-.-.-) Length = 390 | 143 | -- | --- | - | -- | --- | - |
| rbasdl15 | 681 | AV928515 | not_full | gb|BT009541.1| Triticum aestivum clone wr1.pk0152.a12:fis, full insert mRNA sequence Length = 933 | 120 | not_full | VPS29_MOUSE (Q9QZ88) Vacuolar protein sorting 29 (Vesicle protein sorting 29) Length = 182 | 40 | -- | --- | - | -- | --- | - |
| rbasdl14 | 696 | AV928514 | not_full | gb|AY347533.1| Triticum aestivum cultivar LI ribosomal protein L3 (RPL3) mRNA, RPL3-B3 allele, complete cds Length = 1170 | 500 | not_full | RL3_ORYSA (P35684) 60S ribosomal protein L3 Length = 388 | 162 | -- | --- | - | -- | --- | - |
| rbasdl12 | 661 | AV928513 | not_full | gb|AY483154.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA4) mRNA, partial cds Length = 1819 | 308 | not_full | CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 | 19 | -- | --- | - | -- | --- | - |
| rbasdl11 | 724 | AV836867 | not_full | gb|AY029315.1| Zea mays seven transmembrane protein Mlo4 mRNA, complete cds Length = 1841 | 40 | not_full | MLO4_ARATH (O23693) MLO-like protein 4 (AtMlo4) Length = 573 | 20 | -- | --- | - | -- | --- | - |
| rbasdl10 | 706 | AV928512 | not_full | gb|BT009545.1| Triticum aestivum clone wr1.pk148.e12:fis, full insert mRNA sequence Length = 2114 | 54 | not_full | ADF3_MAIZE (Q41764) Actin-depolymerizing factor 3 (ADF 3) (ZmABP3) (ZmADF3) Length = 139 | 117 | -- | --- | - | -- | --- | - |
| rbasdl09 | 852 | AV928511 | not_full | gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 | 500 | not_full | UBIQ_WHEAT (P69326) Ubiquitin Length = 76 | 186 | -- | --- | - | -- | --- | - |
| rbasdl08 | 140 | AV928510 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 32 | not_full | SPDEF_HUMAN (O95238) SAM pointed domain-containing Ets transcription factor (Prostate-derived Ets factor) (Prostate epithelium-specific Ets transcription factor) (Prostate-specific Ets) Length = 335 | 1 | -- | --- | - | -- | --- | - |
| rbasdl07 | 224 | AV928509 | not_full | dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 | 28 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbasdl06 | 689 | AV836866 | not_full | ref|XM_475457.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1155 | 67 | not_full | SDB84_MOUSE (Q9CQE7) Serologically defined breast cancer antigen NY-BR-84 homolog Length = 383 | 11 | -- | --- | - | -- | --- | - |
| rbasdl05 | 673 | AV928508 | not_full | emb|Z50789.1|HVEF1ALFA H.vulgare mRNA for elongation factor 1-alpha Length = 1609 | 500 | not_full | EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 316 | -- | --- | - | -- | --- | - |
| rbasdl04 | 309 | AV928507 | not_full | gb|AY112270.1| Zea mays CL38706_1 mRNA sequence Length = 821 | 9 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbasdl03 | 698 | AV928506 | not_full | emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 | 356 | not_full | CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) Length = 270 | 135 | -- | --- | - | -- | --- | - |
| rbasdl01 | 644 | AV928505 | not_full | emb|AJ508229.2|HVU508229 Hordeum vulgare subsp. vulgare mRNA for saccharopin dehydrogenase-like protein Length = 1817 | 45 | not_full | AASS_ARATH (Q9SMZ4) Alpha-aminoadipic semialdehyde synthase (LKR/SDH) (cAt-LKR/SDH) [Includes: Lysine ketoglutarate reductase (EC 1.5.1.8) (LKR); Saccharopine dehydrogenase (EC 1.5.1.9) (SDH) (cAt-SDH)] Length = 1064 | 23 | -- | --- | - | -- | --- | - |
| rbasdk24 | 678 | AV928504 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdk23 | 750 | AV836865 | not_full | gb|AY109301.1| Zea mays PCO088472 mRNA sequence Length = 1728 | 229 | not_full | PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7.11.1) (AvrPphB susceptible protein 1) Length = 456 | 189 | -- | --- | - | -- | --- | - |
| rbasdk22 | 704 | AV928503 | not_full | emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for S-adenosylmethionine decarboxylase Length = 1893 | 93 | not_full | DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 | 44 | -- | --- | - | -- | --- | - |
| rbasdk21 | 613 | AV928502 | not_full | dbj|AK107758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-A06, full insert sequence Length = 940 | 33 | not_full | CREG1_HUMAN (O75629) CREG1 protein precursor (Cellular repressor of E1A-stimulated genes 1) Length = 220 | 10 | -- | --- | - | -- | --- | - |
| rbasdk20 | 762 | AV928501 | not_full | emb|X52472.1|TAPRP T.aestivum mRNA for a proline-rich protein Length = 1487 | 111 | not_full | LMO6_HUMAN (O43900) LIM domain only protein 6 (Triple LIM domain protein 6) Length = 615 | 2 | -- | --- | - | -- | --- | - |
| rbasdk19 | 219 | AV928500 | not_full | emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73) Length = 6260 | 19 | not_full | GUB2_HORVU (P12257) Lichenase-2 precursor (EC 3.2.1.73) (Lichenase II) (Endo-beta-1,3-1,4 glucanase II)3,1->4)-beta-glucanase isoenzyme EII) (Fragment) Length = 312 | 1 | -- | --- | - | -- | --- | - |
