ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasdl14 |
|---|---|
| Clone Library Name | barley_pub |
>RL3_ORYSA (P35684) 60S ribosomal protein L3| Length = 388 Score = 341 bits (875), Expect = 1e-93 Identities = 163/170 (95%), Positives = 166/170 (97%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR Sbjct: 218 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 277 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 TEMNKKVYKIGK GQE+H A TEFDRTEKDITPMGGFPHYGVVK DYLMIKGCCVGPKKR Sbjct: 278 TEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKR 337 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 VVTLRQSLLKQTSRLALEEIKLKF+DTSSKFGHGRFQTTDEKQRF+GKLK Sbjct: 338 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 387
>RL3B_ARATH (P22738) 60S ribosomal protein L3| Length = 389 Score = 322 bits (824), Expect = 9e-88 Identities = 149/168 (88%), Positives = 160/168 (95%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR Sbjct: 218 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 277 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 TEMNKKVY++GKVGQETH A TE+DRTEKDITPMGGFPHYG+VK DYLMIKGCCVGPKKR Sbjct: 278 TEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKR 337 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGK 192 VVTLRQ+LLKQTSRLA+EEIKLKF+D +S GHGRFQT+ EK +FYG+ Sbjct: 338 VVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQEKAKFYGR 385
>RL3A_ARATH (P17094) 60S ribosomal protein L3| Length = 388 Score = 316 bits (810), Expect = 4e-86 Identities = 147/169 (86%), Positives = 159/169 (94%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR Sbjct: 218 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 277 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 TE+NKK+Y++GKVG E H A TE+DRTEKD+TPMGGFPHYG+VK DYLMIKGCCVGPKKR Sbjct: 278 TELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKR 337 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKL 189 VVTLRQSLL QTSRLALEEIKLKF+DT+S FGHGRFQT+ EK RFY ++ Sbjct: 338 VVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSLEKMRFYNRV 386
>RL3_DROME (O16797) 60S ribosomal protein L3| Length = 415 Score = 253 bits (647), Expect = 3e-67 Identities = 121/177 (68%), Positives = 142/177 (80%), Gaps = 7/177 (3%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D +GVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHR Sbjct: 217 DCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHR 276 Query: 515 TEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGC 357 TE+NKK+Y+IG G T D ASTE+D T+K ITPMGGFPHYG V D++MIKGC Sbjct: 277 TEINKKIYRIG-AGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGC 335 Query: 356 CVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 C+G KKR++TLR+SLLK T R ALE+IKLKF+DTSSK GHGRFQT +K F G LK Sbjct: 336 CIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 392
>RL3_TOXCA (P49149) 60S ribosomal protein L3| Length = 401 Score = 247 bits (631), Expect = 2e-65 Identities = 113/173 (65%), Positives = 140/173 (80%), Gaps = 3/173 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D IGVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHR Sbjct: 217 DCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHR 276 Query: 515 TEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGP 345 TE+NKK+Y++GK + + T++D TEK + PMGGFPHYG+V D++MI+GCCVG Sbjct: 277 TEVNKKIYRLGKSCLTEEGKKNGGTDYDITEKSVNPMGGFPHYGLVNQDFVMIRGCCVGS 336 Query: 344 KKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 KKR +TLR+SL+ QT R A E+I LK++DTSSKFGHGRFQT EK+ F GKLK Sbjct: 337 KKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFGHGRFQTHAEKRAFMGKLK 389
>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)| Length = 402 Score = 247 bits (631), Expect = 2e-65 Identities = 119/176 (67%), Positives = 145/176 (82%), Gaps = 6/176 (3%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV++TVARAGQ GYHHR Sbjct: 217 DVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFTVARAGQKGYHHR 276 Query: 515 TEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 354 TE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HYG V D++M+KGC Sbjct: 277 TEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCV 336 Query: 353 VGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT +EK+ F G LK Sbjct: 337 VGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392
>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)| Length = 402 Score = 246 bits (627), Expect = 6e-65 Identities = 118/176 (67%), Positives = 145/176 (82%), Gaps = 6/176 (3%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+++VARAGQ GYHHR Sbjct: 217 DVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHR 276 Query: 515 TEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 354 TE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HYG V D++M+KGC Sbjct: 277 TEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCV 336 Query: 353 VGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT +EK+ F G LK Sbjct: 337 VGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392
>RL3_BOVIN (P39872) 60S ribosomal protein L3| Length = 402 Score = 246 bits (627), Expect = 6e-65 Identities = 118/176 (67%), Positives = 145/176 (82%), Gaps = 6/176 (3%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+++VARAGQ GYHHR Sbjct: 217 DVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHR 276 Query: 515 TEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 354 TE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HYG V D++M+KGC Sbjct: 277 TEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCV 336 Query: 353 VGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT +EK+ F G LK Sbjct: 337 VGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 392
>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)| (TARBP-B) Length = 402 Score = 245 bits (626), Expect = 8e-65 Identities = 118/176 (67%), Positives = 145/176 (82%), Gaps = 6/176 (3%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+++VARAGQ GYHHR Sbjct: 217 DVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHR 276 Query: 515 TEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 354 TE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HYG V D++M+KGC Sbjct: 277 TEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCV 336 Query: 353 VGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT +EK+ F G LK Sbjct: 337 VGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392
>RL3_ASHGO (Q759R7) 60S ribosomal protein L3| Length = 388 Score = 242 bits (617), Expect = 9e-64 Identities = 117/170 (68%), Positives = 135/170 (79%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHR Sbjct: 217 DVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHR 276 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 T +N KVY+IGK G E +A+TEFDRT+K ITPMGGF HYG V D++M+KG G +KR Sbjct: 277 TSINHKVYRIGKGGDE-GNAATEFDRTKKTITPMGGFVHYGAVNNDFVMVKGSIPGTRKR 335 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 VVTLR+SL TSR ALEE+ LK++DT+SKFG GRFQT EK F G LK Sbjct: 336 VVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKHAFMGTLK 385
>RL3_DICDI (P34113) 60S ribosomal protein L3| Length = 397 Score = 241 bits (615), Expect = 2e-63 Identities = 111/174 (63%), Positives = 137/174 (78%), Gaps = 4/174 (2%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+IGVTKGKG+ GV+ RWGV +LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR Sbjct: 218 DVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHR 277 Query: 515 TEMNKKVYKIGKV----GQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVG 348 E NKK+Y+IG+ G++ TEFD TEK I PMGGF HYG+VK ++LM+KGC G Sbjct: 278 VERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAG 337 Query: 347 PKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 P+KR +TLR+S+ QT R ALE+I LKF+DTSSKFGHG QT ++K +++G K Sbjct: 338 PRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTKYFGVKK 391
>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3| Length = 402 Score = 240 bits (612), Expect = 3e-63 Identities = 117/176 (66%), Positives = 144/176 (81%), Gaps = 6/176 (3%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGA HPARV+++VARAGQ GYHHR Sbjct: 217 DVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHR 276 Query: 515 TEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCC 354 TE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HYG V D++M+KGC Sbjct: 277 TEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCV 336 Query: 353 VGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT +EK+ F G LK Sbjct: 337 VGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 392
>RL3_CAEEL (P50880) 60S ribosomal protein L3| Length = 401 Score = 239 bits (610), Expect = 6e-63 Identities = 110/173 (63%), Positives = 141/173 (81%), Gaps = 3/173 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D IGVT+G G++GV +RW +LPRKTH+GLRKVACIGAWHP+RV++TVARAGQ G+HHR Sbjct: 218 DTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHR 277 Query: 515 TEMNKKVYKIGKVG---QETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGP 345 T +N K+Y+IGK + ++ STEFD T+K ITPMGGFP YG+V DY+M++G +GP Sbjct: 278 TIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGP 337 Query: 344 KKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 KKR++TLR+SL+ QT R+A E+I LK++DTSSK GHGRFQTT EK+ F GKLK Sbjct: 338 KKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3| Length = 401 Score = 237 bits (605), Expect = 2e-62 Identities = 110/173 (63%), Positives = 140/173 (80%), Gaps = 3/173 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D IGVTKG G++GV +RW +LPRKTH+GLRKVACIGAWHP+RV++TVARAGQ G+HHR Sbjct: 218 DTIGVTKGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHR 277 Query: 515 TEMNKKVYKIGKVG---QETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGP 345 T +N K+Y+IGK + ++ STEFD T+K I PMGGFP YG+V DY+M++G +GP Sbjct: 278 TIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGP 337 Query: 344 KKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 KKR++TLR+SL+ QT R+A E+I LK++DTSSK GHGRFQTT EK+ F GKLK Sbjct: 338 KKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like| Length = 406 Score = 235 bits (599), Expect = 1e-61 Identities = 112/177 (63%), Positives = 136/177 (76%), Gaps = 7/177 (3%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHR Sbjct: 217 DVIAVTKGRGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHR 276 Query: 515 TEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGC 357 TE+NKK+Y+IG+ G D AST +D T+K ITP+GGFPHYG V D++M+KGC Sbjct: 277 TELNKKIYRIGR-GLHMEDGKVVKNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGC 335 Query: 356 CVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 G KKRV+TLR+SLL SR ALE I+LKF+DT+SKFGHGRFQT EK+ F G K Sbjct: 336 IAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 392
>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3| Length = 387 Score = 234 bits (597), Expect = 2e-61 Identities = 110/170 (64%), Positives = 134/170 (78%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D++ VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHR Sbjct: 216 DVVAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHR 275 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 T +N KVY++GK G + +A+TEFDRT+K ITPMGGF HYG + D++++KG G +KR Sbjct: 276 TSINHKVYRVGK-GDDEANAATEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKR 334 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 VVTLR+SL TSR ALEE+ LK++DT+SKFG GRFQT EK F G LK Sbjct: 335 VVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384
>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B| Length = 387 Score = 233 bits (594), Expect = 4e-61 Identities = 111/170 (65%), Positives = 133/170 (78%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+IGVT+GKG EG RWG RLPRKTHRGLRKVACIGAWHPA V +TVARAG GY HR Sbjct: 215 DVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHR 274 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 T++N K+Y+IG G + +AST+FD TEK ITPMGGF YGVV+ D++M+ G GP KR Sbjct: 275 TQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKR 333 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 V+TLR+SLL TSR ALE + LK++DT+SKFGHGRFQT E ++F G LK Sbjct: 334 VLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 383
>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A| Length = 387 Score = 233 bits (594), Expect = 4e-61 Identities = 111/170 (65%), Positives = 133/170 (78%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+IGVT+GKG EG RWG RLPRKTHRGLRKVACIGAWHPA V +TVARAG GY HR Sbjct: 215 DVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHR 274 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 T++N K+Y+IG G + +AST+FD TEK ITPMGGF YGVV+ D++M+ G GP KR Sbjct: 275 TQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKR 333 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 V+TLR+SLL TSR ALE + LK++DT+SKFGHGRFQT E ++F G LK Sbjct: 334 VLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 383
>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of| killer protein 8) (Trichodermin resistance protein) Length = 386 Score = 233 bits (593), Expect = 5e-61 Identities = 109/170 (64%), Positives = 132/170 (77%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH R Sbjct: 215 DAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSR 274 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 T +N K+Y++GK G + + +T FDRT+K ITPMGGF HYG +K D++M+KGC G +KR Sbjct: 275 TSINHKIYRVGK-GDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKR 333 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 +VTLR+SL TSR ALEE+ LK++DT+SKFG GRFQT EK F G LK Sbjct: 334 IVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMGTLK 383
>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)| Length = 392 Score = 231 bits (590), Expect = 1e-60 Identities = 109/170 (64%), Positives = 136/170 (80%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+I VTKG G++GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHR Sbjct: 217 DVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHR 276 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 T N KV++IGK G + +AST+FD ++K ITPMGGF YG VK DY+M+KG G KKR Sbjct: 277 TSCNHKVFRIGK-GSDEGNASTDFDISKKQITPMGGFVRYGEVKNDYIMVKGSVPGVKKR 335 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 V+TLR++L QTSR A E+++LK++DTSSKFGHG FQT +EK+ F G LK Sbjct: 336 VMTLRKTLYPQTSRRATEKVELKWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like| Length = 406 Score = 231 bits (590), Expect = 1e-60 Identities = 110/177 (62%), Positives = 135/177 (76%), Gaps = 7/177 (3%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHR Sbjct: 217 DVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHR 276 Query: 515 TEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGC 357 TE+NKK+++IG+ G D AST +D T K ITP+GGFPHYG V D++M+KGC Sbjct: 277 TELNKKIFRIGR-GPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGC 335 Query: 356 CVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 G KKRV+TLR+SLL SR A+E I+LKF+DT+SKFGHGRFQT EK+ F G K Sbjct: 336 IAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 392
>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3| Length = 387 Score = 231 bits (589), Expect = 2e-60 Identities = 111/170 (65%), Positives = 132/170 (77%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHR Sbjct: 216 DAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHR 275 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 T +N K+Y+IGK G + +A+T FDRT+K I PMGGF HYG+V D++M+KG G KKR Sbjct: 276 TSINHKIYRIGK-GDDEGNAATNFDRTKKTINPMGGFVHYGMVNNDFVMVKGSIPGCKKR 334 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 VVTLR+SL TSR A+EE+ LK++DT+SKFG GRFQT EK F G LK Sbjct: 335 VVTLRKSLYTNTSRKAVEEVTLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3| Length = 389 Score = 227 bits (579), Expect = 2e-59 Identities = 108/170 (63%), Positives = 129/170 (75%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+ VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHR Sbjct: 216 DVAAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHR 275 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 T +N KVY++G G E+ A TEFDRT+K I PMGGF YG VK D++++KG G KKR Sbjct: 276 TSINHKVYRVGSAGDESSGA-TEFDRTKKTINPMGGFVRYGNVKNDFMLLKGSIPGVKKR 334 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 +VT+R+SL TSR A E + LK++DT+SKFG GRFQT EK F G LK Sbjct: 335 IVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384
>RL3_NEUCR (P59671) 60S ribosomal protein L3| Length = 392 Score = 223 bits (568), Expect = 4e-58 Identities = 105/170 (61%), Positives = 131/170 (77%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+I VTKG G+ GV RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHR Sbjct: 217 DVIAVTKGHGFTGVTARWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHR 276 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 T +N K+Y+IGK G A+TE D T+K ITPMGGF YG + D++M+KG G KKR Sbjct: 277 TSVNHKIYRIGK-GDAEDSAATEVDVTKKKITPMGGFVRYGEINNDFVMVKGSVPGVKKR 335 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 V+TLR+S+ TSR ALE+++LK++DTSS+FGHG FQT EK++F G LK Sbjct: 336 VMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQTPAEKKQFQGTLK 385
>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3| Length = 383 Score = 219 bits (558), Expect = 6e-57 Identities = 107/170 (62%), Positives = 133/170 (78%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D IGVTKGKG++G V R+GV + PRK+ +G+RKVACIGAWHP+RV Y++ARAGQ G+H R Sbjct: 212 DTIGVTKGKGFQGTVKRFGVRKQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRR 271 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 TE NK+VY I G + + TEFD TEK I+PMGGFPHYG V+ D++M+KG VG +KR Sbjct: 272 TEKNKRVYMI---GNGSSNIKTEFDLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKR 328 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLK 186 VVTLR+SLL+Q A EE+ +KFVDTSSK GHGRFQT+ EK+ FYG K Sbjct: 329 VVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKKAFYGARK 375
>RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)| Length = 130 Score = 153 bits (386), Expect = 5e-37 Identities = 71/116 (61%), Positives = 91/116 (78%), Gaps = 6/116 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPAR +++VARAGQ GYHHR Sbjct: 15 DVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAFSVARAGQKGYHHR 74 Query: 515 TEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 366 TE+NKK+YKIG K G+ ++ T++D ++K I P+G F HYG V D++M+ Sbjct: 75 TEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHYGEVTNDFVML 130
>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P| Length = 365 Score = 140 bits (353), Expect = 4e-33 Identities = 67/150 (44%), Positives = 96/150 (64%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHR Sbjct: 220 DVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHR 279 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 TE+NK++ IG+ G+ D +TE +ITP GGFPHYG+V++D++MI G G KR Sbjct: 280 TELNKRLIAIGENGKLKLDENTEI-----EITPKGGFPHYGIVRSDFMMIAGSVPGAIKR 334 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSK 246 ++ +R ++ + ++ ++ +V SK Sbjct: 335 IIRVRPAIRPPKKKPPVQRPQITYVSVESK 364
>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P| Length = 361 Score = 137 bits (346), Expect = 2e-32 Identities = 66/150 (44%), Positives = 94/150 (62%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHR Sbjct: 217 DVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHR 276 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 TE+NK++ IG+ G+ D E +ITP GGFPHYG+V++D++MI G G KR Sbjct: 277 TELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKR 330 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSK 246 ++ +R ++ + ++ ++ +V SK Sbjct: 331 IIRVRPAIRPPKKKPPVQRPQITYVSVESK 360
>RL3_PYRHO (O59418) 50S ribosomal protein L3P| Length = 362 Score = 137 bits (345), Expect = 3e-32 Identities = 66/150 (44%), Positives = 93/150 (62%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHR Sbjct: 218 DVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHR 277 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 TE+NK++ IG+ G+ D E +ITP GGFPHYG+V+ D++MI G G KR Sbjct: 278 TELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKR 331 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSK 246 ++ +R ++ + ++ ++ +V SK Sbjct: 332 IIRVRPAIRPPKKKPPVQRPQITYVSVESK 361
>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P| Length = 346 Score = 128 bits (322), Expect = 1e-29 Identities = 66/152 (43%), Positives = 94/152 (61%), Gaps = 2/152 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSYTVARAGQNGYH 522 D+I VTKGKG +G V RWGV K R R + +G WHPARV +TV +AGQ G+H Sbjct: 200 DVIAVTKGKGTQGPVKRWGVKVQFHKAQRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFH 259 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 HRTE NK++ IG+ G+ D + E +ITP GGFPHYG+V++D+LMI+G G Sbjct: 260 HRTEFNKRLIAIGENGKLVLDGN------EIEITPKGGFPHYGIVRSDFLMIEGTIPGSF 313 Query: 341 KRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 246 KR++ +R ++ + +E ++ +V SK Sbjct: 314 KRIIRVRPAIRPPKKKPPVERPQITYVSRESK 345
>RL3_METJA (P54014) 50S ribosomal protein L3P| Length = 335 Score = 119 bits (298), Expect = 9e-27 Identities = 65/154 (42%), Positives = 91/154 (59%), Gaps = 2/154 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVT-RLPRKTHRGL-RKVACIGAWHPARVSYTVARAGQNGYH 522 D IGVTKGKG++G V RWGV + + +G+ R V IG W P V ++V GQ GYH Sbjct: 197 DTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYH 256 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE NK++ KIG G E ITP GGF HYGV++ +Y+++KG GP Sbjct: 257 QRTEYNKRILKIGNNGDE--------------ITPKGGFLHYGVIRNNYVVLKGSVQGPA 302 Query: 341 KRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 240 KR++ LR+++ Q + + EI ++ T+SK G Sbjct: 303 KRLIVLRRAIRPQEPLIKVPEI--TYISTTSKQG 334
>RL3_ARCFU (O28354) 50S ribosomal protein L3P| Length = 331 Score = 119 bits (298), Expect = 9e-27 Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 2/154 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSYTVARAGQNGYH 522 D+I VTKGKG++G V RWGV L K R R+V +G W+P V +TV +AGQ G+H Sbjct: 193 DVIAVTKGKGFQGPVKRWGVITLDAKHARSSKHRRVGNLGPWNPHHVRWTVPQAGQMGFH 252 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE NK++ KIG+ G+E ITP GGF HYGV++ Y+++ G GP Sbjct: 253 QRTEYNKRLIKIGENGEE--------------ITPKGGFLHYGVIRTQYVLVTGSVPGPV 298 Query: 341 KRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 240 KR++ +R ++ + + + + + +V T+SK G Sbjct: 299 KRLIRMRDAI--RPPKAHFDGVNIVYVSTTSKQG 330
>RL3_METKA (Q8TY90) 50S ribosomal protein L3P| Length = 361 Score = 119 bits (297), Expect = 1e-26 Identities = 62/130 (47%), Positives = 82/130 (63%), Gaps = 2/130 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSYTVARAGQNGYH 522 D+ +TKGKG++GVV RWGVT RKT R R + IG P+RV +TV AGQ GYH Sbjct: 203 DVSAITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYH 262 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE NK++ KIG+ G+E +TP GGF +YGVV+ DY+MI G GPK Sbjct: 263 QRTEHNKRILKIGEDGEE--------------VTPRGGFVNYGVVRGDYIMIHGTVPGPK 308 Query: 341 KRVVTLRQSL 312 KR++ +R ++ Sbjct: 309 KRLIRVRPAV 318
>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P| Length = 338 Score = 113 bits (283), Expect = 5e-25 Identities = 63/127 (49%), Positives = 79/127 (62%), Gaps = 2/127 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYH 522 D+I VTKGKGY+GV+ R+GVT LPR K +G R+ IG PA V +T R GQ G+H Sbjct: 202 DVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQAPA-VMFTQPRPGQMGFH 260 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE NK++ KIG+ G E ITP GFPHYGVVK Y++I+G G + Sbjct: 261 QRTEYNKRLLKIGENGAE--------------ITPKSGFPHYGVVKGPYILIQGSVPGAR 306 Query: 341 KRVVTLR 321 KR+V LR Sbjct: 307 KRLVVLR 313
>RL3_METTH (O26110) 50S ribosomal protein L3P| Length = 337 Score = 112 bits (281), Expect = 8e-25 Identities = 64/155 (41%), Positives = 90/155 (58%), Gaps = 3/155 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSYTVARAGQNGYH 522 D I VTKGKG++G V RWG+ K R R + +G W P+R +TV +AGQ GYH Sbjct: 197 DAIAVTKGKGFQGPVKRWGIRIQYGKAARSSKGRHIGSLGPWTPSRTMWTVPQAGQMGYH 256 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKD-ITPMGGFPHYGVVKADYLMIKGCCVGP 345 RTE NK++ KIG D +E D + P GGF YG+V+ DY+MIKG GP Sbjct: 257 RRTEYNKQILKIG-------------DASEADLVNPDGGFVRYGLVRNDYVMIKGSVPGP 303 Query: 344 KKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 240 KR+V LR+++ + + E ++ ++ T+SK G Sbjct: 304 TKRLVVLRKAI--RAAGKQEEAPQINYISTASKQG 336
>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P| Length = 337 Score = 112 bits (281), Expect = 8e-25 Identities = 61/154 (39%), Positives = 89/154 (57%), Gaps = 2/154 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSYTVARAGQNGYH 522 D +T GKG +G V RWG+ + K R LR+V +GA++P+RVS+ V + GQ GYH Sbjct: 200 DTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAFNPSRVSWRVPQMGQMGYH 259 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE NK++ KIG G+E +TP GGF +YG+V+ DY++IKG GP Sbjct: 260 QRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRGDYILIKGSVPGPS 305 Query: 341 KRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 240 KR++ LR + + + L E + ++ SK G Sbjct: 306 KRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337
>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P| Length = 334 Score = 111 bits (278), Expect = 2e-24 Identities = 62/155 (40%), Positives = 87/155 (56%), Gaps = 2/155 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVT-RLPRKTHRGL-RKVACIGAWHPARVSYTVARAGQNGYH 522 D + VTKGKG++G V RWGV + + +G+ R+ IG W P RV +TV AGQ G+H Sbjct: 196 DTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFH 255 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE NK++ K+G G E ITP GGF +YG VK Y+++KG GP Sbjct: 256 QRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGYVVVKGTVQGPA 301 Query: 341 KRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGH 237 KR+V LR ++ + L E+ ++ SK G+ Sbjct: 302 KRLVVLRGAVRPAEDKFGLPEV--TYISKESKQGN 334
>RL3_METMA (Q8PV50) 50S ribosomal protein L3P| Length = 337 Score = 109 bits (272), Expect = 9e-24 Identities = 59/154 (38%), Positives = 88/154 (57%), Gaps = 2/154 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSYTVARAGQNGYH 522 D +T GKG +G V RWG+ K R LR++ +G+++P+RVS+ V + GQ GYH Sbjct: 200 DTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSFNPSRVSWRVPQMGQMGYH 259 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE NK++ KIG G+E +TP GGF +YG+V+ DY++IKG GP Sbjct: 260 QRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRGDYVLIKGSVPGPS 305 Query: 341 KRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 240 KR++ LR + + + L E + ++ SK G Sbjct: 306 KRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337
>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P| Length = 331 Score = 105 bits (263), Expect = 1e-22 Identities = 60/152 (39%), Positives = 83/152 (54%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D++ VTKGKG+ G V R+GV LPRK + R + +G WHP V TV +AGQ GY R Sbjct: 193 DVLSVTKGKGFTGHVQRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQR 252 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 T N +V K K DA T I GGF HYG+VK DY+++ G GP KR Sbjct: 253 TISNVRVLKYSK----GEDADT--------INVRGGFLHYGLVKNDYVLLFGSVPGPAKR 300 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 240 ++ +R ++ ++ +KL ++ SK G Sbjct: 301 LIKMRDPARQKVP--DIDNVKLDYISLESKQG 330
>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P| Length = 331 Score = 103 bits (257), Expect = 5e-22 Identities = 58/152 (38%), Positives = 82/152 (53%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D++ +TKGKG+ G V R+GV LPRK + R + +G WHP V TV +AGQ G+ R Sbjct: 193 DVVSITKGKGFTGHVKRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGFQQR 252 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 T N +V K G E D I GGF HYG VK DY+++ G G KR Sbjct: 253 TISNVRVIKYGN--------KEEVD----SINVRGGFLHYGFVKNDYVLLFGSIPGASKR 300 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 240 ++ +R ++ +EE+KL+++ SK G Sbjct: 301 LIKMRDPARQKVP--DIEEVKLEYISLESKQG 330
>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P| Length = 334 Score = 99.4 bits (246), Expect = 9e-21 Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 2/154 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSYTVARAGQNGYH 522 D G+TKGKG +G V RWGV + K R R++ +G W+P+RV TV + GQ GYH Sbjct: 198 DAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYH 257 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE+NK++ I G E TP GGFP+YG V Y ++KG GP+ Sbjct: 258 QRTELNKRLIDIND-GDEP--------------TPDGGFPNYGEVDGPYTLVKGSVPGPE 302 Query: 341 KRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 240 +R+V R ++ S E+ ++V T+S G Sbjct: 303 QRLVRFRPAVRPNESPRLDPEV--RYVSTASNQG 334
>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)| Length = 337 Score = 97.8 bits (242), Expect = 3e-20 Identities = 53/130 (40%), Positives = 73/130 (56%), Gaps = 2/130 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSYTVARAGQNGYH 522 D+ GVTKGKG +G V RWGV + K R R++ +G W+P+RV TV + GQ GYH Sbjct: 201 DVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYH 260 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE+NK++ IG+ + T D GGF +YG V Y ++KG GP Sbjct: 261 QRTELNKRLIDIGEGDEPTVD---------------GGFVNYGEVDGPYTLVKGSVPGPD 305 Query: 341 KRVVTLRQSL 312 KR+V R ++ Sbjct: 306 KRLVRFRPAV 315
>RL3_SULTO (Q975I1) 50S ribosomal protein L3P| Length = 343 Score = 96.3 bits (238), Expect = 8e-20 Identities = 63/154 (40%), Positives = 86/154 (55%), Gaps = 2/154 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYH 522 DIIGVTKGKG++GVV R+GV LPR K +G RKV G + SY V + GQ GYH Sbjct: 208 DIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGPSF-STPSY-VPQPGQMGYH 265 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE NK++ KI +I P GGF +YG+V+ YL+I+G +G K Sbjct: 266 RRTEYNKRILKISD--------------DPNEINPKGGFVNYGIVRNTYLIIEGSIIGAK 311 Query: 341 KRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 240 KR + LR + + S + K+ +V+ S+ G Sbjct: 312 KRPLFLRYPI--RPSWIPQSAPKITYVNLYSQQG 343
>RL3_NANEQ (P60458) 50S ribosomal protein L3P| Length = 321 Score = 95.5 bits (236), Expect = 1e-19 Identities = 52/141 (36%), Positives = 78/141 (55%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+I VTKGKG++GV+ R+ V R K+ +G+RKV IG+ P R+ TV GQ GYH R Sbjct: 190 DVIAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRR 249 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 TE NK + KIG + + GG+ YG V +++KG GP+KR Sbjct: 250 TEYNKLIIKIG-----------------EPLNVEGGWVRYGQVIGPTILLKGSVPGPRKR 292 Query: 335 VVTLRQSLLKQTSRLALEEIK 273 ++ LR+++ + +E I+ Sbjct: 293 LIILREAIRPPRKQEKVEGIE 313
>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P| Length = 344 Score = 92.4 bits (228), Expect = 1e-18 Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 4/156 (2%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYH 522 D+I VTKGKG++GV+ RWGV LPR K +G R++ H + +AGQ G+H Sbjct: 204 DVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRRIGARS--HGRSTFWETPQAGQTGFH 261 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE NK++ I G + +TP GGF YGVV++ ++M+ G G Sbjct: 262 RRTEYNKRILMIDDDGYK--------------VTPAGGFLRYGVVRSTFVMLSGSIPGTP 307 Query: 341 KRVVTLRQSLL--KQTSRLALEEIKLKFVDTSSKFG 240 KR + +R ++ + +L + + ++ ++ +SK G Sbjct: 308 KRPIVMRWAIRPPEWYLKLGVRKPEITYISLASKQG 343
>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P| Length = 351 Score = 91.3 bits (225), Expect = 3e-18 Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 2/128 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYH 522 D++GVTKGKG+ GV+ R+ V LPR K +G RK+ G SYT + GQ G+H Sbjct: 216 DVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFH 273 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE NK++ KIG K+I P GGF YG+V+ Y++++G +G K Sbjct: 274 RRTEYNKRIIKIGD--------------EPKEINPAGGFVRYGIVRNTYVLLEGSILGSK 319 Query: 341 KRVVTLRQ 318 KR + LR+ Sbjct: 320 KRPIFLRE 327
>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P| Length = 342 Score = 88.2 bits (217), Expect = 2e-17 Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 2/154 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYH 522 DIIGVTKGKG++GV+ R+ V PR K +G RK+ G + SY V + GQ G+H Sbjct: 207 DIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRKIGARGP-SISTPSY-VPQPGQLGFH 264 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 RTE NK++ KIG +I P GG +YG+VK YL+I+G +G + Sbjct: 265 RRTEYNKRIIKIGD--------------NVNEINPAGGIVNYGLVKNTYLVIEGSVLGSR 310 Query: 341 KRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 240 KR + LR + S + K+ +V+ +S+ G Sbjct: 311 KRPLFLRYPIRPSWSPESAP--KITYVNLASQQG 342
>RL3_PORGI (Q7MTL3) 50S ribosomal protein L3| Length = 205 Score = 46.2 bits (108), Expect = 9e-05 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYTVARAGQNG 528 D++G +KGKG++GVV R G + + T H LR +GA +PA+V AGQ G Sbjct: 107 DVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGTRMAGQMG 166 Query: 527 YHHRTEMNKKVYKI 486 T N +V K+ Sbjct: 167 NERVTVQNLEVIKV 180
>RL3_CLOAB (Q97EH8) 50S ribosomal protein L3| Length = 209 Score = 45.4 bits (106), Expect = 2e-04 Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 4/132 (3%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAGQNG 528 D+ GV+KGKG++G + RWG R P K HR + + G+ P+R + G G Sbjct: 109 DVSGVSKGKGFQGTIRRWGAHRGPMSHGSKFHRAVGSMG--GSSDPSRTFKSKKMPGHMG 166 Query: 527 YHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVG 348 + + T +N +V K+ + + + ++IKG G Sbjct: 167 HVNTTVLNVEVAKV-------------------------------IPEKNLILIKGGVPG 195 Query: 347 PKKRVVTLRQSL 312 P K V ++ S+ Sbjct: 196 PNKSFVVIKNSV 207
>RL3_CLOTE (Q890N9) 50S ribosomal protein L3| Length = 209 Score = 44.7 bits (104), Expect = 3e-04 Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 4/132 (3%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAGQNG 528 D+ G +KGKGY+G++ RW R P K HR + + A +PAR AG G Sbjct: 109 DVTGTSKGKGYQGIIKRWNAHRGPMSHGSKFHRAVGSMG--AASYPARTFKNKRMAGHMG 166 Query: 527 YHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVG 348 T +N +V K + + + ++IKG G Sbjct: 167 NVKSTVLNLEVVKT-------------------------------IPEKNLILIKGGIPG 195 Query: 347 PKKRVVTLRQSL 312 P K V +R S+ Sbjct: 196 PNKGYVIIRNSI 207
>RL3_BACTN (Q8A476) 50S ribosomal protein L3| Length = 205 Score = 44.3 bits (103), Expect = 4e-04 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYTVARAGQNG 528 D++G +KGKG++GVV R G + + T H RK IGA +PA+V + GQ G Sbjct: 107 DVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLG 166 Query: 527 YHHRTEMNKKVYKI 486 T N +V K+ Sbjct: 167 GDRVTVQNLQVLKV 180
>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3| Length = 209 Score = 42.7 bits (99), Expect = 0.001 Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 4/132 (3%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAGQNG 528 D+ GV+KGKG++G + RW +R P K HR + A P+R G G Sbjct: 109 DVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMG--AASDPSRTFKNKRMPGHMG 166 Query: 527 YHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVG 348 + T +N +V KI EK+I ++IKG G Sbjct: 167 AKNTTVLNLEVVKI---------------MPEKNI----------------ILIKGGIPG 195 Query: 347 PKKRVVTLRQSL 312 P K V +R S+ Sbjct: 196 PNKGTVVIRNSV 207
>RL3_BIFLO (Q8G417) 50S ribosomal protein L3| Length = 213 Score = 41.2 bits (95), Expect = 0.003 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTVARAGQNGY 525 D+ G TKGKG+ G + RWG R +H+ R+ +GA P+R+ AG+ G+ Sbjct: 111 DVTGTTKGKGFAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGH 170 Query: 524 HHRTEMNKKV 495 T N V Sbjct: 171 VTATTQNLTV 180
>RL3_BACST (P28600) 50S ribosomal protein L3| Length = 213 Score = 41.2 bits (95), Expect = 0.003 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G++KGKG++G + R G +R P R R+ +GA P RV T G+ G Sbjct: 109 DVTGISKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGAIAPNRVFKTKNLPGRMGGER 168 Query: 518 RTEMNKKVYKI 486 T N K+ K+ Sbjct: 169 VTIQNLKIVKV 179
>RK3_CHLS6 (Q7XYP4) 50S ribosomal protein L3, chloroplast precursor| Length = 302 Score = 41.2 bits (95), Expect = 0.003 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAGQNG 528 D+ G + GKG++G + RWG+ R P K+HR + C P+RV + AG+ G Sbjct: 198 DVSGTSSGKGFQGSIRRWGMKRGPMSHGSKSHRQHGSIGCSAT--PSRVYKGLKMAGRMG 255 Query: 527 YHHRT 513 +T Sbjct: 256 NERKT 260
>RL3_ENTFA (Q839G4) 50S ribosomal protein L3| Length = 209 Score = 40.0 bits (92), Expect = 0.007 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 1/129 (0%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G TKGKG++G + R G +R P R R+ +G P RV AG+ G Sbjct: 109 DVTGTTKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRVFKNKRLAGRMGGDR 168 Query: 518 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 339 T N +V K+ V+ + ++IKG G KK Sbjct: 169 VTIQNLEVVKVD-------------------------------VERNVILIKGNIPGAKK 197 Query: 338 RVVTLRQSL 312 ++T++ ++ Sbjct: 198 SLITIKSAV 206
>RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 39.3 bits (90), Expect = 0.012 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%) Frame = +3 Query: 129 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 284 + H+ F +++T+++LR+S+ L+ I+ L G E A P++ + K DF Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233 Query: 285 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 458 Q G + + LA+ TLL D LD L HTI+ ++ G V L + S G Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290
>RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 39.3 bits (90), Expect = 0.012 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%) Frame = +3 Query: 129 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 284 + H+ F +++T+++LR+S+ L+ I+ L G E A P++ + K DF Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233 Query: 285 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 458 Q G + + LA+ TLL D LD L HTI+ ++ G V L + S G Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290
>RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 38.9 bits (89), Expect = 0.015 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 8/118 (6%) Frame = +3 Query: 129 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 284 + H+ F +++T+++LR+S L+ I+ L G E A P++ + K DF Sbjct: 177 IDHLEFYTEEQLTEIVLRTSGILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233 Query: 285 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 458 Q G + + LA+ TLL D LD L HTI+ ++ G V L + S G Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290
>RL3_STRP6 (Q5XED5) 50S ribosomal protein L3| Length = 208 Score = 38.9 bits (89), Expect = 0.015 Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 1/129 (0%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G +KGKG++GV+ R G +R P R R+ +G P RV AG+ G + Sbjct: 107 DVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLAGRMGGNR 166 Query: 518 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 339 T N ++ ++ +++ + +++KG G KK Sbjct: 167 VTVQNLEIVQV-------------------------------ILEKNVILVKGNVPGAKK 195 Query: 338 RVVTLRQSL 312 ++T++ ++ Sbjct: 196 SLITIKSAV 204
>RL3_STRP1 (Q9A1X4) 50S ribosomal protein L3| Length = 208 Score = 38.9 bits (89), Expect = 0.015 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G++KGKG++GV+ R G +R P R R+ +G P RV AG+ G + Sbjct: 107 DVTGISKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLAGRMGGNR 166 Query: 518 RTEMNKKVYKI 486 T N ++ ++ Sbjct: 167 VTVQNLEIVQV 177
>RM03_BOVIN (Q3ZBX6) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 38.5 bits (88), Expect = 0.020 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVSYTVARAGQN 531 D+ T GKG++GV+ RWG P KTH R+ I ARV GQ Sbjct: 205 DVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAISTGDVARVWPGTKMPGQL 261 Query: 530 GYHHRTEMNKKVYKI 486 G RT KV++I Sbjct: 262 GNVDRTAFGLKVWRI 276
>RM03_HUMAN (P09001) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 38.1 bits (87), Expect = 0.026 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVSYTVARAGQN 531 D+ T GKG++GV+ RWG P KTH R+ + RV G+ Sbjct: 205 DVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAVATGDIGRVWPGTKMPGKM 261 Query: 530 GYHHRTEMNKKVYKI 486 G +RTE KV++I Sbjct: 262 GNIYRTEYGLKVWRI 276
>RL3_MYCPU (Q98PY0) 50S ribosomal protein L3| Length = 266 Score = 38.1 bits (87), Expect = 0.026 Identities = 39/145 (26%), Positives = 61/145 (42%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+ G++KGKG+ G + R ++ K+H G G P R Q G Sbjct: 106 DVTGISKGKGFAGTIKRHN-QKIGPKSHGGG------GGSKPVR---------QTGSLGD 149 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR 336 NK V + G H+ T E +T VK + L++KG GPKK Sbjct: 150 ISGNKVVKGMTMPGHLGHEQVT-IQNLEVIMTD---------VKNNILLVKGAVPGPKKG 199 Query: 335 VVTLRQSLLKQTSRLALEEIKLKFV 261 V +++ K S+ A++ + L+ V Sbjct: 200 FVVIKECAKKIPSKEAVKLVDLEIV 224
>RL3_CORDI (P60453) 50S ribosomal protein L3| Length = 218 Score = 37.7 bits (86), Expect = 0.034 Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTVARAGQNGY 525 D+ G TKGKGY G + R G R+V IGA P RV AG+ G Sbjct: 113 DVTGTTKGKGYAGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGS 172 Query: 524 HHRTEMNKKVYKI 486 T N KV KI Sbjct: 173 DRVTTQNLKVQKI 185
>RM03_MOUSE (Q99N95) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 37.7 bits (86), Expect = 0.034 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVSYTVARAGQN 531 D+ T GKG++GV+ RWG P KTH R+ I ARV G+ Sbjct: 205 DVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVWPGTKMPGRM 261 Query: 530 GYHHRTEMNKKVYKI 486 G +RT KV+++ Sbjct: 262 GNQNRTVYGLKVWRV 276
>RL3_SPIKU (P60457) 50S ribosomal protein L3| Length = 258 Score = 37.7 bits (86), Expect = 0.034 Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 1/129 (0%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G +KGKG+ G + R +R P G R V +GA P R+ + G G Sbjct: 106 DVTGTSKGKGFTGSIKRHNYSRGPMGHGSGYHRGVGSMGAIAPNRILKSKKMPGHIGTEK 165 Query: 518 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 339 T N ++ I TEK+ L++KG GPKK Sbjct: 166 VTIQNLEIIAID---------------TEKNA----------------LLVKGSIPGPKK 194 Query: 338 RVVTLRQSL 312 + V +++++ Sbjct: 195 QFVVIKEAI 203
>RM03_RAT (P18665) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 347 Score = 37.7 bits (86), Expect = 0.034 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVSYTVARAGQN 531 D+ T GKG++GV+ RWG P KTH R+ I ARV G+ Sbjct: 205 DVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVWPGTKMPGKM 261 Query: 530 GYHHRTEMNKKVYKI 486 G +RT KV+++ Sbjct: 262 GNQNRTVYGLKVWRV 276
>RL3_STRP8 (P60452) 50S ribosomal protein L3| Length = 208 Score = 37.7 bits (86), Expect = 0.034 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G +KGKG++GV+ R G +R P R R+ +G P RV AG+ G + Sbjct: 107 DVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLAGRMGGNR 166 Query: 518 RTEMNKKVYKI 486 T N ++ ++ Sbjct: 167 VTVQNLEIVQV 177
>RL3_STRP3 (P60451) 50S ribosomal protein L3| Length = 208 Score = 37.7 bits (86), Expect = 0.034 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G +KGKG++GV+ R G +R P R R+ +G P RV AG+ G + Sbjct: 107 DVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLAGRMGGNR 166 Query: 518 RTEMNKKVYKI 486 T N ++ ++ Sbjct: 167 VTVQNLEIVQV 177
>RL3_STRA5 (Q8E2D1) 50S ribosomal protein L3| Length = 208 Score = 37.7 bits (86), Expect = 0.034 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G +KGKG++GV+ R G +R P R R+ +G P RV AG+ G + Sbjct: 107 DVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLAGRMGGNR 166 Query: 518 RTEMNKKVYKI 486 T N ++ ++ Sbjct: 167 VTVQNLEIVQV 177
>RL3_STRA3 (Q8E7T8) 50S ribosomal protein L3| Length = 208 Score = 37.7 bits (86), Expect = 0.034 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G +KGKG++GV+ R G +R P R R+ +G P RV AG+ G + Sbjct: 107 DVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLAGRMGGNR 166 Query: 518 RTEMNKKVYKI 486 T N ++ ++ Sbjct: 167 VTVQNLEIVQV 177
>RL3_THETN (Q8R7V4) 50S ribosomal protein L3| Length = 210 Score = 37.4 bits (85), Expect = 0.044 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 5/75 (6%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGA-WHPARVSYTVARAGQN 531 D+ G++KGKG+ GV+ R+G R P K H R+V +GA P R G+ Sbjct: 109 DVTGISKGKGFAGVIKRYGARRGPMSHGSKYH---RRVGSMGATTDPGRTFKGKKMPGRM 165 Query: 530 GYHHRTEMNKKVYKI 486 G T N +V K+ Sbjct: 166 GSDRVTIQNLEVVKV 180
>RL3_BACCR (Q81J42) 50S ribosomal protein L3| Length = 210 Score = 37.4 bits (85), Expect = 0.044 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G++KGKG++GV+ R G +R P R R+ +G P RV AG+ G Sbjct: 109 DVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRVFKGKKLAGRMGGDQ 168 Query: 518 RTEMNKKVYKI 486 T N ++ ++ Sbjct: 169 VTIQNLEIVQV 179
>RL3_BACAN (Q81VT0) 50S ribosomal protein L3| Length = 210 Score = 37.4 bits (85), Expect = 0.044 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G++KGKG++GV+ R G +R P R R+ +G P RV AG+ G Sbjct: 109 DVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRVFKGKKLAGRMGGDQ 168 Query: 518 RTEMNKKVYKI 486 T N ++ ++ Sbjct: 169 VTIQNLEIVQV 179
>RK3B_ARATH (Q9LRN8) 50S ribosomal protein L3-2, chloroplast precursor| Length = 324 Score = 37.0 bits (84), Expect = 0.057 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRK-----THRGLRKVACIGAWHPARVSYTVARAGQN 531 D+ G+T+GKG++G + R G + +P +HR A P +V AG+ Sbjct: 183 DVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDA--PGKVFKGRKMAGRM 240 Query: 530 GYHHRTEMNKKVYKI 486 G RT N VYKI Sbjct: 241 GADQRTVKNVWVYKI 255
>RL3_BACSU (P42920) 50S ribosomal protein L3 (BL3)| Length = 209 Score = 37.0 bits (84), Expect = 0.057 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ GV+KGKG++G + R G +R P R R+ +G P RV G+ G Sbjct: 109 DVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNRVFKGKLLPGRMGGEQ 168 Query: 518 RTEMNKKVYKI 486 T N ++ K+ Sbjct: 169 ITVQNLEIVKV 179
>RL3_STRMU (Q8DS16) 50S ribosomal protein L3| Length = 208 Score = 37.0 bits (84), Expect = 0.057 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G TKGKG++G + R G +R P R R+ +G P RV AG+ G + Sbjct: 107 DVTGTTKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLAGRMGGNR 166 Query: 518 RTEMNKKVYKI 486 T N +V ++ Sbjct: 167 VTVQNLEVVQV 177
>RL3_LISMO (Q8Y440) 50S ribosomal protein L3| Length = 209 Score = 36.6 bits (83), Expect = 0.075 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D GV+KGKG++GV+ R G +R P R R+ +G P RV G+ G Sbjct: 109 DATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKLLPGRMGGEQ 168 Query: 518 RTEMNKKVYKI 486 T N ++ K+ Sbjct: 169 ITIQNLEIVKV 179
>RL3_LISMF (Q71WE6) 50S ribosomal protein L3| Length = 209 Score = 36.6 bits (83), Expect = 0.075 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D GV+KGKG++GV+ R G +R P R R+ +G P RV G+ G Sbjct: 109 DATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKLLPGRMGGEQ 168 Query: 518 RTEMNKKVYKI 486 T N ++ K+ Sbjct: 169 ITIQNLEIVKV 179
>RL3_LISIN (Q927K7) 50S ribosomal protein L3| Length = 209 Score = 36.6 bits (83), Expect = 0.075 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D GV+KGKG++GV+ R G +R P R R+ +G P RV G+ G Sbjct: 109 DATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKLLPGRMGGEQ 168 Query: 518 RTEMNKKVYKI 486 T N ++ K+ Sbjct: 169 ITIQNLEIVKV 179
>RL3_STRR6 (Q8CWV8) 50S ribosomal protein L3| Length = 208 Score = 36.6 bits (83), Expect = 0.075 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 1/129 (0%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G +KGKG++GV+ R G +R P R R+ +G P RV AG+ G Sbjct: 107 DVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLAGRMGGDR 166 Query: 518 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 339 T N +V ++ V + + ++IKG G KK Sbjct: 167 VTIQNLEVVQV-------------------------------VPEKNVILIKGNVPGAKK 195 Query: 338 RVVTLRQSL 312 ++T++ ++ Sbjct: 196 SLITIKSAV 204
>RL3_STRPN (Q97SV5) 50S ribosomal protein L3| Length = 208 Score = 36.6 bits (83), Expect = 0.075 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 1/129 (0%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G +KGKG++GV+ R G +R P R R+ +G P RV AG+ G Sbjct: 107 DVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLAGRMGGDR 166 Query: 518 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 339 T N +V ++ V + + ++IKG G KK Sbjct: 167 VTIQNLEVVQV-------------------------------VPEKNVILIKGNVPGAKK 195 Query: 338 RVVTLRQSL 312 ++T++ ++ Sbjct: 196 SLITIKSAV 204
>RL3_AQUPY (Q9ZI50) 50S ribosomal protein L3| Length = 244 Score = 36.2 bits (82), Expect = 0.098 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG 582 D+ G++KG+G+ GV+ RW PR HR R V IG Sbjct: 111 DVWGISKGRGFAGVMKRWDFAGFPRSHGHRYHRAVGAIG 149
>RL3_CORGL (Q8NT09) 50S ribosomal protein L3| Length = 218 Score = 35.8 bits (81), Expect = 0.13 Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTVARAGQNGY 525 D+ G TKGKGY G + R G R+V IG A P R+ AG+ G Sbjct: 113 DVTGTTKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGN 172 Query: 524 HHRTEMNKKVYKI 486 T N KV KI Sbjct: 173 DRVTTQNLKVQKI 185
>RL3_STAAC (Q5HDV8) 50S ribosomal protein L3| Length = 209 Score = 35.4 bits (80), Expect = 0.17 Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 8/138 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+ GV+KGKG++G + R G +R P + HR Sbjct: 106 DVTGVSKGKGFQGAIKRHGQSRGP---------------------------MSHGSHFHR 138 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD----YLMIKG 360 G VG + DAS F + +K MGG + VV+ D +++KG Sbjct: 139 AP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTENKVILVKG 188 Query: 359 CCVGPKKRVVTLRQSLLK 306 GPKK +V +R S+ K Sbjct: 189 NVPGPKKGLVEIRTSIKK 206
>RL3_CHLCV (Q824Q1) 50S ribosomal protein L3| Length = 221 Score = 35.4 bits (80), Expect = 0.17 Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 2/129 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVARAGQNGYH 522 DI GV+KGKG++GV+ R+G P+ G R IG P R R G Sbjct: 119 DISGVSKGKGFQGVMKRFGFRGGPKTHGSGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTV 178 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 + T N +V KI EK + L++KG GP+ Sbjct: 179 NVTVKNLEVVKID---------------LEKKV----------------LLVKGAIPGPR 207 Query: 341 KRVVTLRQS 315 VV +R+S Sbjct: 208 GSVVVIRRS 216
>RL3_STAAW (P60450) 50S ribosomal protein L3| Length = 220 Score = 35.4 bits (80), Expect = 0.17 Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 8/138 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+ GV+KGKG++G + R G +R P + HR Sbjct: 117 DVTGVSKGKGFQGAIKRHGQSRGP---------------------------MSHGSHFHR 149 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD----YLMIKG 360 G VG + DAS F + +K MGG + VV+ D +++KG Sbjct: 150 AP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTENKVILVKG 199 Query: 359 CCVGPKKRVVTLRQSLLK 306 GPKK +V +R S+ K Sbjct: 200 NVPGPKKGLVEIRTSIKK 217
>RL3_STAAS (Q6G771) 50S ribosomal protein L3| Length = 220 Score = 35.4 bits (80), Expect = 0.17 Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 8/138 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+ GV+KGKG++G + R G +R P + HR Sbjct: 117 DVTGVSKGKGFQGAIKRHGQSRGP---------------------------MSHGSHFHR 149 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD----YLMIKG 360 G VG + DAS F + +K MGG + VV+ D +++KG Sbjct: 150 AP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTENKVILVKG 199 Query: 359 CCVGPKKRVVTLRQSLLK 306 GPKK +V +R S+ K Sbjct: 200 NVPGPKKGLVEIRTSIKK 217
>RL3_STAAR (Q6GEI3) 50S ribosomal protein L3| Length = 220 Score = 35.4 bits (80), Expect = 0.17 Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 8/138 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+ GV+KGKG++G + R G +R P + HR Sbjct: 117 DVTGVSKGKGFQGAIKRHGQSRGP---------------------------MSHGSHFHR 149 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD----YLMIKG 360 G VG + DAS F + +K MGG + VV+ D +++KG Sbjct: 150 AP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTENKVILVKG 199 Query: 359 CCVGPKKRVVTLRQSLLK 306 GPKK +V +R S+ K Sbjct: 200 NVPGPKKGLVEIRTSIKK 217
>RL3_STAAN (P60449) 50S ribosomal protein L3| Length = 220 Score = 35.4 bits (80), Expect = 0.17 Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 8/138 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+ GV+KGKG++G + R G +R P + HR Sbjct: 117 DVTGVSKGKGFQGAIKRHGQSRGP---------------------------MSHGSHFHR 149 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD----YLMIKG 360 G VG + DAS F + +K MGG + VV+ D +++KG Sbjct: 150 AP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTENKVILVKG 199 Query: 359 CCVGPKKRVVTLRQSLLK 306 GPKK +V +R S+ K Sbjct: 200 NVPGPKKGLVEIRTSIKK 217
>RL3_STAAM (P60448) 50S ribosomal protein L3| Length = 220 Score = 35.4 bits (80), Expect = 0.17 Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 8/138 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+ GV+KGKG++G + R G +R P + HR Sbjct: 117 DVTGVSKGKGFQGAIKRHGQSRGP---------------------------MSHGSHFHR 149 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD----YLMIKG 360 G VG + DAS F + +K MGG + VV+ D +++KG Sbjct: 150 AP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTENKVILVKG 199 Query: 359 CCVGPKKRVVTLRQSLLK 306 GPKK +V +R S+ K Sbjct: 200 NVPGPKKGLVEIRTSIKK 217
>RL3_TROWT (Q83FY6) 50S ribosomal protein L3| Length = 210 Score = 35.4 bits (80), Expect = 0.17 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTVARAGQNGY 525 D++G +KGKG+ G + R +HR RK +GA P+RV AG+ G Sbjct: 104 DVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGTRMAGRLGS 163 Query: 524 HHRTEMNKKVYKI 486 T N ++ KI Sbjct: 164 SRVTVHNLRLVKI 176
>RL3_TROW8 (Q83I78) 50S ribosomal protein L3| Length = 210 Score = 35.4 bits (80), Expect = 0.17 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTVARAGQNGY 525 D++G +KGKG+ G + R +HR RK +GA P+RV AG+ G Sbjct: 104 DVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGTRMAGRLGS 163 Query: 524 HHRTEMNKKVYKI 486 T N ++ KI Sbjct: 164 SRVTVHNLRLVKI 176
>RL3_LEPIN (Q9XD36) 50S ribosomal protein L3| Length = 206 Score = 35.0 bits (79), Expect = 0.22 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = -2 Query: 692 IIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSYTVARAGQNGYHH 519 + GV+KG+GY+GVV R G P R R +GA P+RV V G+ G Sbjct: 110 VTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQK 169 Query: 518 RTEMNKKVYKIGK 480 T N KV +I + Sbjct: 170 TTVRNLKVVRINE 182
>RL3_LEPIC (Q72NG1) 50S ribosomal protein L3| Length = 206 Score = 35.0 bits (79), Expect = 0.22 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = -2 Query: 692 IIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSYTVARAGQNGYHH 519 + GV+KG+GY+GVV R G P R R +GA P+RV V G+ G Sbjct: 110 VTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQK 169 Query: 518 RTEMNKKVYKIGK 480 T N KV +I + Sbjct: 170 TTVRNLKVVRINE 182
>RL3_TREPA (O83219) 50S ribosomal protein L3| Length = 208 Score = 35.0 bits (79), Expect = 0.22 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIG-AWHPARVSYTVARAGQNGY 525 D+ ++KGKG++GVV RWG + R +H + R+ G P R V G+ G Sbjct: 106 DVCALSKGKGFQGVVKRWGFSG-GRSSHGSKFHREAGSTGQCTSPGRTFKNVKMPGRMGA 164 Query: 524 HHRTEMNKKVYKI 486 T N ++ +I Sbjct: 165 ERVTVQNLRIERI 177
>RL3_CHLTE (Q8KAH2) 50S ribosomal protein L3| Length = 209 Score = 35.0 bits (79), Expect = 0.22 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTR---WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGY 525 +++GVTKGKG+ GVV R G +R ++ R + G+ P+R AG+ G Sbjct: 109 NVLGVTKGKGFAGVVKRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGG 168 Query: 524 HHRTEMNKKVYKI 486 ++T N + K+ Sbjct: 169 KNKTVQNLVIVKV 181
>RM03_CAEEL (P49404) Putative mitochondrial 39S ribosomal protein L3| Length = 403 Score = 34.7 bits (78), Expect = 0.28 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = -2 Query: 686 GVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTE 510 G T G++G + RWG+ P R+T + R++ +G+ AR+ G GY RT Sbjct: 228 GKTIDWGFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTV 287 Query: 509 MNKKVYKI 486 ++ +I Sbjct: 288 SGLEIVRI 295
>RL3_BUCBP (Q89A68) 50S ribosomal protein L3| Length = 214 Score = 34.7 bits (78), Expect = 0.28 Identities = 27/73 (36%), Positives = 30/73 (41%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNGY 525 DIIG +KGKG+ G V RW L R IG P RV AG G Sbjct: 110 DIIGTSKGKGFCGTVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGN 169 Query: 524 HHRTEMNKKVYKI 486 H T N + KI Sbjct: 170 HRVTVQNLDIVKI 182
>RL3_GEOSL (P60454) 50S ribosomal protein L3| Length = 210 Score = 34.7 bits (78), Expect = 0.28 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIG-AWHPARVSYTVARAGQNGY 525 D+ G + GKG++GV+ RWG R R +H R IG + +P+RV GQ G Sbjct: 109 DVTGTSIGKGFQGVIKRWGF-RGGRSSHGSCFHRAPGSIGSSAYPSRVFKNKKMPGQLGN 167 Query: 524 HHRTEMNKKVYKI 486 T +V ++ Sbjct: 168 ERVTVQRLQVVRV 180
>RL3_BACHD (Q9Z9L4) 50S ribosomal protein L3| Length = 209 Score = 34.3 bits (77), Expect = 0.37 Identities = 31/129 (24%), Positives = 48/129 (37%), Gaps = 1/129 (0%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G +KGKG+ G + R R P R R+ +G P RV A G+ G Sbjct: 109 DVTGTSKGKGFAGAIKRHNQARGPMSHGSRYHRRPGSMGPVDPNRVFKGKALPGRMGGEQ 168 Query: 518 RTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKK 339 T N ++ K+ + + L++KG G KK Sbjct: 169 VTVQNLEIIKVD-------------------------------AERNLLLVKGNVPGAKK 197 Query: 338 RVVTLRQSL 312 VT+R ++ Sbjct: 198 SYVTVRSAI 206
>RL3_THEMA (P38515) 50S ribosomal protein L3| Length = 207 Score = 34.3 bits (77), Expect = 0.37 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPR----KTHRGLRKVACIGAWHPARVSYTVARAGQNG 528 D+ G TKG+G+ G + RWG + P+ K HR L V PA++ G+ G Sbjct: 105 DVTGWTKGRGFAGAMKRWGFSGGPKSHGSKFHRELGSVG--QHTEPAKIWKGKKMPGRYG 162 Query: 527 YHHRTEMNKKVYKI 486 T N +V I Sbjct: 163 NERVTVRNLQVVDI 176
>RL3_MYCCT (P10134) 50S ribosomal protein L3| Length = 223 Score = 34.3 bits (77), Expect = 0.37 Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 4/142 (2%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHPARVSYTVARAGQNG 528 D+ G++KGKG+ G + R +R P HRG+ + I R+ + G G Sbjct: 107 DVTGISKGKGFAGGIKRHNYSRGPMAHGSGYHRGIGSMGAI----INRIFKSKKMPGHMG 162 Query: 527 YHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVG 348 RT N ++ I + + ++IKG G Sbjct: 163 NAKRTIQNLEIIAIDQ-------------------------------SNNIMLIKGSIPG 191 Query: 347 PKKRVVTLRQSLLKQTSRLALE 282 PK V ++Q++ +S+ A+E Sbjct: 192 PKNSFVQIKQNVKGMSSKQAVE 213
>RL3_COREF (Q8FS80) 50S ribosomal protein L3| Length = 218 Score = 34.3 bits (77), Expect = 0.37 Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTVARAGQNGY 525 D+ G +KGKGY G + R G R+V IG A P R+ AG+ G Sbjct: 113 DVTGTSKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGN 172 Query: 524 HHRTEMNKKVYKI 486 T N KV KI Sbjct: 173 DRVTTQNLKVQKI 185
>RL3_THETH (P52860) 50S ribosomal protein L3| Length = 206 Score = 33.9 bits (76), Expect = 0.48 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGY 525 D+ G +KG+G+ GV+ RW P H+ R IG P RV AG G Sbjct: 103 DVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGA 162 Query: 524 HHRTEMNKKVYKI 486 T MN +V + Sbjct: 163 ERVTVMNLEVVDV 175
>RL3_THET8 (Q5SHN8) 50S ribosomal protein L3| Length = 206 Score = 33.9 bits (76), Expect = 0.48 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGY 525 D+ G +KG+G+ GV+ RW P H+ R IG P RV AG G Sbjct: 103 DVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGA 162 Query: 524 HHRTEMNKKVYKI 486 T MN +V + Sbjct: 163 ERVTVMNLEVVDV 175
>RL3_WOLSU (Q7M8D4) 50S ribosomal protein L3| Length = 192 Score = 33.9 bits (76), Expect = 0.48 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Frame = -2 Query: 680 TKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIG--AWHPARVSYTVARAGQNGYHHRTE 510 TKG+G+ GV+ RW P HR R+ IG W P RV AGQ G T Sbjct: 100 TKGRGFTGVMKRWNFAGGPAAHGHRFKRRTGSIGNREW-PGRVQPGKKMAGQYGNEKVTV 158 Query: 509 MNKKV 495 N+ V Sbjct: 159 QNEIV 163
>RL3_VIBVY (Q7MPI8) 50S ribosomal protein L3| Length = 209 Score = 33.9 bits (76), Expect = 0.48 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYTVARAGQNG 528 D+ G +KGKG++G V RW R TH R IG P RV AG G Sbjct: 108 DVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMG 166 Query: 527 YHHRTEMNKKVYKI 486 T N ++ ++ Sbjct: 167 AERVTTQNLEIVRV 180
>RL3_VIBVU (Q8DE39) 50S ribosomal protein L3| Length = 209 Score = 33.9 bits (76), Expect = 0.48 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYTVARAGQNG 528 D+ G +KGKG++G V RW R TH R IG P RV AG G Sbjct: 108 DVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMG 166 Query: 527 YHHRTEMNKKVYKI 486 T N ++ ++ Sbjct: 167 AERVTTQNLEIVRV 180
>RL3_VIBPA (Q87T13) 50S ribosomal protein L3| Length = 209 Score = 33.9 bits (76), Expect = 0.48 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYTVARAGQNG 528 D+ G +KGKG++G V RW R TH R IG P RV AG G Sbjct: 108 DVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMG 166 Query: 527 YHHRTEMNKKVYKI 486 T N ++ ++ Sbjct: 167 AERVTTQNLEIVRV 180
>RL3_VIBCH (Q9KNY4) 50S ribosomal protein L3| Length = 209 Score = 33.9 bits (76), Expect = 0.48 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYTVARAGQNG 528 D+ G +KGKG++G V RW R TH R IG P RV AG G Sbjct: 108 DVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMG 166 Query: 527 YHHRTEMNKKVYKI 486 T N ++ ++ Sbjct: 167 AERVTTQNLEIVRV 180
>RL3_OCEIH (Q8ETY2) 50S ribosomal protein L3| Length = 209 Score = 33.9 bits (76), Expect = 0.48 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSYTVARAGQNGYH 522 D+ G +KGKG++GV+ R G R P TH R +G P RV G G Sbjct: 109 DVTGTSKGKGFQGVIKRHGQQRGP-TTHGSHFHRAPGAMGVIDPMRVFKGKKLPGHMGSE 167 Query: 521 HRTEMNKKVYKI 486 T N +V + Sbjct: 168 QVTIQNLEVVSV 179
>RL3_BUCAP (Q8K950) 50S ribosomal protein L3| Length = 209 Score = 33.9 bits (76), Expect = 0.48 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYTVARAGQNG 528 D+ G++KGKG+ G V RW R TH R IG P RV AG G Sbjct: 108 DVTGISKGKGFSGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHLG 166 Query: 527 YHHRTEMNKKVYKI 486 + T N + KI Sbjct: 167 NNRVTVQNLNIVKI 180
>RL3_AQUAE (O66431) 50S ribosomal protein L3| Length = 241 Score = 33.9 bits (76), Expect = 0.48 Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 2/147 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG-AWHPARVSYTVARAGQNGYH 522 D+ G++KG+G+ G + RW P+ HR R V IG P RV G G Sbjct: 111 DVWGISKGRGFAGAMKRWDFAGFPKSHGHRYHRAVGAIGQRTDPGRVWKGKRMPGHYG-- 168 Query: 521 HRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPK 342 K + G F + + + +++KG G Sbjct: 169 -----------------------------AKPVRVQGLFVVDVLPEENAILVKGSVPGHN 199 Query: 341 KRVVTLRQSLLKQTSRLALEEIKLKFV 261 K +V + QS + L++ + +F+ Sbjct: 200 KGIVVVEQSTIAYRKSQKLKQKRYQFI 226
>RL3_NEIMB (P60444) 50S ribosomal protein L3| Length = 214 Score = 33.5 bits (75), Expect = 0.63 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYTVARAGQNGY 525 D+ G +KGKG+ G + R +G R R R IG A P RV AGQ G Sbjct: 111 DVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGN 170 Query: 524 HHRTEMNKKVYKI 486 T +V ++ Sbjct: 171 TKATVQKLEVVRV 183
>RL3_NEIMA (P60443) 50S ribosomal protein L3| Length = 214 Score = 33.5 bits (75), Expect = 0.63 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYTVARAGQNGY 525 D+ G +KGKG+ G + R +G R R R IG A P RV AGQ G Sbjct: 111 DVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGN 170 Query: 524 HHRTEMNKKVYKI 486 T +V ++ Sbjct: 171 TKATVQKLEVVRV 183
>RL3_MYCTU (P60442) 50S ribosomal protein L3| Length = 217 Score = 33.1 bits (74), Expect = 0.83 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQN 531 D+ G +KGKG+ G + R G + + HR R + G PARV AG+ Sbjct: 113 DVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFKGTRMAGRM 170 Query: 530 GYHHRTEMNKKVYKI 486 G T +N V+K+ Sbjct: 171 GNDRVTVLNLLVHKV 185
>RL3_MYCBO (P60441) 50S ribosomal protein L3| Length = 217 Score = 33.1 bits (74), Expect = 0.83 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQN 531 D+ G +KGKG+ G + R G + + HR R + G PARV AG+ Sbjct: 113 DVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFKGTRMAGRM 170 Query: 530 GYHHRTEMNKKVYKI 486 G T +N V+K+ Sbjct: 171 GNDRVTVLNLLVHKV 185
>FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 231 Score = 33.1 bits (74), Expect = 0.83 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%) Frame = +3 Query: 531 ILTSPSNSVG--HPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTF----ITLTLGYTDD 692 + +SPS S+ S+ G+ +KT +GL G TP +N F ++L GY+ D Sbjct: 68 VTSSPSRSMSATSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGD 127
>RL3_BLOFL (Q7VQE8) 50S ribosomal protein L3| Length = 219 Score = 33.1 bits (74), Expect = 0.83 Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNGY 525 D+ G++KGKG+ G V RW L R IG P +V AG GY Sbjct: 109 DVTGISKGKGFAGAVKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLGY 168 Query: 524 HHRTEMNKKVYKI 486 T N V I Sbjct: 169 EKATIQNLAVINI 181
>RL3_MYCLE (P30762) 50S ribosomal protein L3| Length = 217 Score = 32.7 bits (73), Expect = 1.1 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQN 531 D+ G +KGKG+ G + R G + + HR R + G PARV AG+ Sbjct: 113 DVTGTSKGKGFSGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFKGTRMAGRM 170 Query: 530 GYHHRTEMNKKVYKI 486 G T N V+K+ Sbjct: 171 GNDRVTVQNLLVHKV 185
>RL3_DEIRA (Q9RXK2) 50S ribosomal protein L3| Length = 211 Score = 32.7 bits (73), Expect = 1.1 Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 10/80 (12%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-----RKTHR-----GLRKVACIGAWHPARVSYTVA 546 D G +KGKG +GV+ RW P +K HR G RK P RV Sbjct: 103 DATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKT-------PGRVYKGKR 155 Query: 545 RAGQNGYHHRTEMNKKVYKI 486 AG G T N +V +I Sbjct: 156 MAGHMGMERVTVQNLEVVEI 175
>FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 231 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Frame = +3 Query: 522 VVSILTSPSNSVGHPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTF----ITLTLGYTD 689 V I+T N S+ G+ +KT +GL G TP +N F ++L GY+ Sbjct: 67 VGDIITITLNERTSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSG 126 Query: 690 D 692 D Sbjct: 127 D 127
>RL3_CHLMU (Q9PJL4) 50S ribosomal protein L3| Length = 221 Score = 32.0 bits (71), Expect = 1.8 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVARAGQNGYH 522 D+ G++KGKG++GV+ ++G P+ G R IG P R R G Sbjct: 119 DVCGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHAGSIGMRSTPGRCFPGSKRPSHMGCD 178 Query: 521 HRTEMNKKVYKI 486 T N +V K+ Sbjct: 179 RVTVKNLEVVKV 190
>RL3_STAES (Q8CRG0) 50S ribosomal protein L3| Length = 220 Score = 32.0 bits (71), Expect = 1.8 Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 8/138 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+ GV+KGKG++G + R G R P + HR Sbjct: 117 DVTGVSKGKGFQGAIKRHGQGRGP---------------------------MAHGSHFHR 149 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD----YLMIKG 360 G VG + DAS F + +K MGG + VV+ D +++KG Sbjct: 150 AP--------GSVGMAS-DASKVF-KGQKMPGRMGGNTVTVQNLEVVQVDTENSVILVKG 199 Query: 359 CCVGPKKRVVTLRQSLLK 306 GPKK +V + S+ K Sbjct: 200 NVPGPKKGLVEITTSIKK 217
>RL3_STAEQ (Q5HLZ9) 50S ribosomal protein L3| Length = 220 Score = 32.0 bits (71), Expect = 1.8 Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 8/138 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+ GV+KGKG++G + R G R P + HR Sbjct: 117 DVTGVSKGKGFQGAIKRHGQGRGP---------------------------MAHGSHFHR 149 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD----YLMIKG 360 G VG + DAS F + +K MGG + VV+ D +++KG Sbjct: 150 AP--------GSVGMAS-DASKVF-KGQKMPGRMGGNTVTVQNLEVVQVDTENSVILVKG 199 Query: 359 CCVGPKKRVVTLRQSLLK 306 GPKK +V + S+ K Sbjct: 200 NVPGPKKGLVEITTSIKK 217
>RL3_LACPL (Q88XY6) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.4 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHH 519 D+ G+TKG GY+G + + G +R P R R+ +GA RV G+ G H Sbjct: 110 DVTGITKGHGYQGNIHKDGQSRGPMAHGSRYHRRPGSMGA-IINRVFKGKKLPGRMGNHQ 168 Query: 518 RTEMNKKVYK 489 RT N ++ + Sbjct: 169 RTMQNLQIVR 178
>RL3_CHLTR (O84533) 50S ribosomal protein L3| Length = 221 Score = 31.6 bits (70), Expect = 2.4 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 591 DI G++KGKG++GV+ ++G P+ G + A Sbjct: 119 DICGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHA 153
>CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (EC 4.6.1.1)| (ATP pyrophosphate-lyase) (Adenylyl cyclase) (Fragment) Length = 572 Score = 31.2 bits (69), Expect = 3.1 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = -2 Query: 563 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQ-----ETHDASTEFDRTEKDITPMGGFPH 399 + Y G + Y + +G GQ ET+ + + +R++ D+TP+GG P Sbjct: 401 IRYDEVTKGYDYYGQTANTAARTESVGNGGQVLMTCETYHSLSTAERSQFDVTPLGGVPL 460 Query: 398 YGV 390 GV Sbjct: 461 RGV 463
>RL3_BUCAI (P57591) 50S ribosomal protein L3| Length = 209 Score = 31.2 bits (69), Expect = 3.1 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRW 642 DI G++KGKG+ G V RW Sbjct: 108 DITGISKGKGFSGTVKRW 125
>RL3_STAHJ (Q4L8B4) 50S ribosomal protein L3| Length = 220 Score = 31.2 bits (69), Expect = 3.1 Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 8/138 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D+ G +KGKG++G + R G R P + HR Sbjct: 117 DVTGTSKGKGFQGAIKRHGQARGP---------------------------MAHGSHFHR 149 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGVVKAD----YLMIKG 360 G VG + DAS F + +K MGG + VV+ D +++KG Sbjct: 150 AP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEVVQVDTENNVILVKG 199 Query: 359 CCVGPKKRVVTLRQSLLK 306 GPKK V ++ S+ K Sbjct: 200 NVPGPKKGFVEIQTSIKK 217
>RM09_YEAST (P31334) 60S ribosomal protein L9, mitochondrial precursor (YmL9)| Length = 269 Score = 31.2 bits (69), Expect = 3.1 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW----HPARVSYTVARAGQNG 528 D+ V+KGKG+ GV+ R+G L R +H G++ P RV G G Sbjct: 167 DVRSVSKGKGFTGVMKRYGFKGL-RASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMG 225 Query: 527 YHHRTEMNKKVYKI 486 H T N KV K+ Sbjct: 226 NEHVTIQNVKVLKV 239
>RL3_ACTAC (P94799) 50S ribosomal protein L3 (Fragment)| Length = 121 Score = 30.8 bits (68), Expect = 4.1 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNG 528 D+ G +KGKG++G V RW R TH +G+ P RV AG G Sbjct: 20 DVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLG 78 Query: 527 YHHRTEMNKKVYKI 486 T + +V ++ Sbjct: 79 NERVTVQSLEVVRV 92
>IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)| Length = 363 Score = 30.8 bits (68), Expect = 4.1 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3 Query: 174 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 323 SS+++ L I +L+ L TA KLG + + D + +++QGLA Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152
>IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)| Length = 363 Score = 30.8 bits (68), Expect = 4.1 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3 Query: 174 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 323 SS+++ L I +L+ L TA KLG + + D + +++QGLA Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152
>RL3_XANCP (Q8PC49) 50S ribosomal protein L3| Length = 216 Score = 30.8 bits (68), Expect = 4.1 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNG 528 D+ GVTKGKG++G + R+ R+ TH G+ P RV +G G Sbjct: 115 DVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMG 173 Query: 527 YHHRTEMNKKVYKI 486 ++ N +V K+ Sbjct: 174 AVQQSTQNLEVVKV 187
>RL3_XANAC (Q8PNS4) 50S ribosomal protein L3| Length = 216 Score = 30.8 bits (68), Expect = 4.1 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNG 528 D+ GVTKGKG++G + R+ R+ TH G+ P RV +G G Sbjct: 115 DVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMG 173 Query: 527 YHHRTEMNKKVYKI 486 ++ N +V K+ Sbjct: 174 AVQQSTQNLEVVKV 187
>RL3_WIGBR (Q8D212) 50S ribosomal protein L3| Length = 215 Score = 30.8 bits (68), Expect = 4.1 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNGY 525 +I G++KGKG+ G + RW L R IG P +V +G GY Sbjct: 108 NITGISKGKGFSGTMKRWNFHGQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLGY 167 Query: 524 HHRTEMNKKVYKI 486 + T N V KI Sbjct: 168 NKNTVKNLFVVKI 180
>RL3_STRAW (Q82DP5) 50S ribosomal protein L3| Length = 214 Score = 30.8 bits (68), Expect = 4.1 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQN 531 D+ G +KGKG+ GV+ R G ++ HR + G P RV + AG+ Sbjct: 112 DVTGKSKGKGFAGVMKRHNFKGLGAGHGTQRKHRSPGSIG--GCATPGRVFKGLRMAGRM 169 Query: 530 GYHHRTEMNKKVYKI 486 G T N V+ + Sbjct: 170 GNERVTTQNLTVHAV 184
>RL3_HAEIN (P44344) 50S ribosomal protein L3| Length = 208 Score = 30.8 bits (68), Expect = 4.1 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNG 528 D+ G +KGKG++G V RW R TH +G+ P RV AG G Sbjct: 107 DVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLG 165 Query: 527 YHHRTEMNKKVYKI 486 T + +V ++ Sbjct: 166 AERVTVQSLEVVRV 179
>RL3_CAUCR (Q9A8V3) 50S ribosomal protein L3| Length = 255 Score = 30.4 bits (67), Expect = 5.4 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHR---GLRKVACIG-AWHPARVSYTVARAGQNG 528 DI GVT GKG+ G + RW L R TH R G P R AG G Sbjct: 114 DIQGVTVGKGFAGAMKRWNFGGL-RATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLG 172 Query: 527 YHHRTEMNKKVYKI 486 T +N V+K+ Sbjct: 173 QETVTTLNVTVWKV 186
>RL3_BORBU (P94267) 50S ribosomal protein L3| Length = 206 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAGQNG 528 D+ G TKGKG++G + R + P K HR L A PAR AG+ Sbjct: 107 DVTGTTKGKGFQGAMKRHNFSGGPSSHGSKFHRHLGGTG--QATTPARTFKGTKMAGRMA 164 Query: 527 YHHRTEMNKKVYKI 486 + +T N +V I Sbjct: 165 GNQQTIQNLEVVLI 178
>ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor (ICAM-5)| (Telencephalin) Length = 924 Score = 30.4 bits (67), Expect = 5.4 Identities = 16/66 (24%), Positives = 27/66 (40%) Frame = +3 Query: 228 ETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVRE 407 E+ P ++ E L C RG G+ + WP+ + + G +H + Sbjct: 670 ESTCPSHQTWLEGAEASALACAARGRPSPGVRCSREGIPWPEQQRVSREDAGTYHCVATN 729 Query: 408 ATHGSD 425 A HG+D Sbjct: 730 A-HGTD 734
>HEM3_DESVH (Q72AV0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 315 Score = 30.4 bits (67), Expect = 5.4 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Frame = +3 Query: 168 LRSSSSLELAIEPLL----LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHH 335 LR S L LA+ P L L G ++T + KL G E D + T GL + GLA HH Sbjct: 129 LRRQSQL-LALRPDLDIISLRGNVDTRLRKLMDG----EFDAIVMATAGLKRLGLAAPHH 183 Query: 336 TLLWP 350 +L P Sbjct: 184 EVLAP 188
>PHF12_MOUSE (Q5SPL2) PHD finger protein 12 (PHD factor 1) (Pf1)| Length = 1003 Score = 30.4 bits (67), Expect = 5.4 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +2 Query: 533 SDQPEQQCRTP*QDARHQYRQPCEDLCGSCGEGG 634 +D+ E++ R P +++R R D C SC EGG Sbjct: 33 TDEAEKRSRKPEKESRRSGRATNHDSCDSCKEGG 66
>RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 366 Score = 30.4 bits (67), Expect = 5.4 Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%) Frame = +3 Query: 150 KMTQLILRSSSSLELAIEPLL--LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 323 ++ +++LR+S L + ++P ++ + P+L D+ Q +T+G ++ + Sbjct: 216 ELAEIVLRNSKKLNIEVDPTSAGVIADRSRSTPRLANNRLLWVRDYAQSKTKGNVEASVC 275 Query: 324 EGHHTLLWPDTASLDHQVVGLHHTIVR 404 E ++ D LD Q T++R Sbjct: 276 EAALDMIGIDHLGLDKQDRNYLDTLMR 302
>RL3_CHLPN (Q9Z7Q7) 50S ribosomal protein L3| Length = 219 Score = 30.4 bits (67), Expect = 5.4 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVARAGQNGYH 522 D+ G++KGKG++GV+ ++G P G R IG P R R G Sbjct: 119 DVRGISKGKGFQGVMKKFGFRGGPGSHGSGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAE 178 Query: 521 HRTEMNKKVYKI 486 + T N +V K+ Sbjct: 179 NVTVKNLEVIKV 190
>BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA)| (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin) Length = 7389 Score = 30.0 bits (66), Expect = 7.0 Identities = 18/55 (32%), Positives = 33/55 (60%) Frame = +3 Query: 141 RFDKMTQLILRSSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGL 305 R+ +T+L + +LE A++ L G L++ +L +DK+E++ L ET+GL Sbjct: 5516 RYKDITKLSADVAKTLEHALQ---LAGQLQSMHKELCNWLDKVEVELLSYETQGL 5567
>POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1776 Score = 30.0 bits (66), Expect = 7.0 Identities = 18/85 (21%), Positives = 35/85 (41%) Frame = +1 Query: 262 TNLSLISSSARREVCFSRDWRRVTTRFFGPTQHPLIIR*SAFTTP**GKPPMGVMSFSVL 441 T +++S+++R + DWR R F +QH V Sbjct: 1400 TQATIVSNASRSDP----DWRYTVVRIFAKSQH------------------------KVN 1431 Query: 442 SNSVEASWVSCPTLPILYTFLFISV 516 S+ SW +C TL +++ F+ +++ Sbjct: 1432 DGSIFGSWKACQTLALMHDFVILTL 1456
>RL3_SHEON (Q8EK68) 50S ribosomal protein L3| Length = 212 Score = 29.6 bits (65), Expect = 9.1 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYTVARAGQNG 528 D+ G +KGKG++G V RW R TH R IG P RV +G G Sbjct: 111 DVTGQSKGKGFQGGVKRWNF-RTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMG 169 Query: 527 YHHRTEMNKKVYKI 486 T N V ++ Sbjct: 170 AERVTTQNLDVVRV 183
>RL3_MYCPE (Q8EUB3) 50S ribosomal protein L3| Length = 310 Score = 29.6 bits (65), Expect = 9.1 Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 1/143 (0%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHR 516 D +TKGKG+ G + RW KV +G H A GY HR Sbjct: 106 DAQAITKGKGFTGAIKRWNF------------KVGPLG--HGA------------GYPHR 139 Query: 515 TEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV-VKADYLMIKGCCVGPKK 339 + + + G GQ ++ + + ++ + +++KG GP Sbjct: 140 YQGSISFGRGGSQGQRVPKGQKMSGHYGHELVTISNLTVVSIELEKNLILVKGSVPGPVN 199 Query: 338 RVVTLRQSLLKQTSRLALEEIKL 270 +V L+ ++ S+ ++ IKL Sbjct: 200 SLVLLKTTV---KSKKQVDPIKL 219
>RL3_SHIFL (P60447) 50S ribosomal protein L3| Length = 209 Score = 29.6 bits (65), Expect = 9.1 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYTVARAGQNG 528 D+ G +KGKG+ G V RW R TH R IG P +V AGQ G Sbjct: 108 DVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMG 166 Query: 527 YHHRTEMNKKVYKI 486 T + V ++ Sbjct: 167 NERVTVQSLDVVRV 180
>RL3_SALTY (P60446) 50S ribosomal protein L3| Length = 209 Score = 29.6 bits (65), Expect = 9.1 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYTVARAGQNG 528 D+ G +KGKG+ G V RW R TH R IG P +V AGQ G Sbjct: 108 DVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMG 166 Query: 527 YHHRTEMNKKVYKI 486 T + V ++ Sbjct: 167 NERVTVQSLDVVRV 180
>RL3_SALTI (P60445) 50S ribosomal protein L3| Length = 209 Score = 29.6 bits (65), Expect = 9.1 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYTVARAGQNG 528 D+ G +KGKG+ G V RW R TH R IG P +V AGQ G Sbjct: 108 DVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMG 166 Query: 527 YHHRTEMNKKVYKI 486 T + V ++ Sbjct: 167 NERVTVQSLDVVRV 180
>RL3_PASMU (Q9CL32) 50S ribosomal protein L3| Length = 209 Score = 29.6 bits (65), Expect = 9.1 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNG 528 D+ G +KGKG+ G V RW R TH +G+ P RV AG G Sbjct: 108 DVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLG 166 Query: 527 YHHRTEMNKKVYKI 486 T + +V ++ Sbjct: 167 NERVTVQSLEVVRV 180
>RL3_ECOLI (P60438) 50S ribosomal protein L3| Length = 209 Score = 29.6 bits (65), Expect = 9.1 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYTVARAGQNG 528 D+ G +KGKG+ G V RW R TH R IG P +V AGQ G Sbjct: 108 DVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMG 166 Query: 527 YHHRTEMNKKVYKI 486 T + V ++ Sbjct: 167 NERVTVQSLDVVRV 180
>RL3_ECOL6 (P60439) 50S ribosomal protein L3| Length = 209 Score = 29.6 bits (65), Expect = 9.1 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYTVARAGQNG 528 D+ G +KGKG+ G V RW R TH R IG P +V AGQ G Sbjct: 108 DVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMG 166 Query: 527 YHHRTEMNKKVYKI 486 T + V ++ Sbjct: 167 NERVTVQSLDVVRV 180
>RL3_ECO57 (P60440) 50S ribosomal protein L3| Length = 209 Score = 29.6 bits (65), Expect = 9.1 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYTVARAGQNG 528 D+ G +KGKG+ G V RW R TH R IG P +V AGQ G Sbjct: 108 DVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMG 166 Query: 527 YHHRTEMNKKVYKI 486 T + V ++ Sbjct: 167 NERVTVQSLDVVRV 180
>RL3_HAEDU (Q7VKD2) 50S ribosomal protein L3| Length = 208 Score = 29.6 bits (65), Expect = 9.1 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -2 Query: 695 DIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYTVARAGQNG 528 D+ G +KGKG+ G V RW R TH +G+ P RV AG G Sbjct: 107 DVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLG 165 Query: 527 YHHRTEMNKKVYKI 486 T + +V ++ Sbjct: 166 AERVTVQSLEVVRV 179
>PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)| Length = 1004 Score = 29.6 bits (65), Expect = 9.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 533 SDQPEQQCRTP*QDARHQYRQPCEDLCGSCGEGG 634 +D+ E++ R P ++ R R D C SC EGG Sbjct: 33 TDEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGG 66
>RUVB_ENTFA (Q839T5) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 338 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%) Frame = +3 Query: 129 VSHVRF---DKMTQLILRSSSSLELAI--EPLLLVGGLETAVPKLGRGVDKLELDFLQCE 293 +SH+ + + +++LRS+ + I E + P++ + K DF Q + Sbjct: 178 ISHMEYYQEQDLKEIVLRSADIFQTEIFEEGAFEIARRSRGTPRIANRLLKRVRDFAQVQ 237 Query: 294 TRGLLQQGLAEGHHTLLWPDTASLDH 371 + G + + +A+ TLL D LD+ Sbjct: 238 SDGKIDRAIADKALTLLQVDHQGLDY 263 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,283,573 Number of Sequences: 219361 Number of extensions: 2213066 Number of successful extensions: 6457 Number of sequences better than 10.0: 162 Number of HSP's better than 10.0 without gapping: 6124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6378 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6912958834 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
