Clone Name | rbasdm03 |
---|---|
Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Minus Query: 135 caccatctcttcaaccatatcaacctagcttcaggg 170 ||||| ||||||||||| ||||||||||| |||||| Sbjct: 11348358 caccacctcttcaaccacatcaacctagcctcaggg 11348323 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 411 tattttacaaatggaccccta 431 ||||||||||||||||||||| Sbjct: 21960471 tattttacaaatggaccccta 21960491 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 21967425 tattttacaaatggacccct 21967406
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Minus Query: 135 caccatctcttcaaccatatcaacctagcttcaggg 170 ||||| ||||||||||| ||||||||||| |||||| Sbjct: 127311 caccacctcttcaaccacatcaacctagcctcaggg 127276
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Minus Query: 135 caccatctcttcaaccatatcaacctagcttcaggg 170 ||||| ||||||||||| ||||||||||| |||||| Sbjct: 11345121 caccacctcttcaaccacatcaacctagcctcaggg 11345086 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 411 tattttacaaatggaccccta 431 ||||||||||||||||||||| Sbjct: 21953500 tattttacaaatggaccccta 21953520 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 21960454 tattttacaaatggacccct 21960435
>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15, complete sequence Length = 159270 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Minus Query: 135 caccatctcttcaaccatatcaacctagcttcaggg 170 ||||| ||||||||||| ||||||||||| |||||| Sbjct: 56655 caccacctcttcaaccacatcaacctagcctcaggg 56620
>emb|AL512447.14| Human DNA sequence from clone RP11-77B15 on chromosome 6 Contains part of the FUT9 gene for fucosyltransferase 9 (alpha (1,3) fucosyltransferase), complete sequence Length = 102086 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 396 tcaatgtccttcatatatttta 417 |||||||||||||||||||||| Sbjct: 38871 tcaatgtccttcatatatttta 38850
>emb|Z98596.1|SPAC14C4 S.pombe chromosome I cosmid c14C4 Length = 36138 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Plus Query: 131 cctgcaccatctcttcaaccatatcaacct 160 |||||||||||||||||||| ||| ||||| Sbjct: 11286 cctgcaccatctcttcaaccttattaacct 11315
>gb|AC093816.3| Homo sapiens BAC clone RP11-364P2 from 4, complete sequence Length = 170227 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 ctcttctgatgctccacactca 266 |||||||||||||||||||||| Sbjct: 160504 ctcttctgatgctccacactca 160525
>ref|NM_001020342.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC14C4.05c), partial mRNA Length = 2535 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 131 cctgcaccatctcttcaaccatatcaacct 160 |||||||||||||||||||| ||| ||||| Sbjct: 1747 cctgcaccatctcttcaaccttattaacct 1718
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 367 ttttctcactttccttctccaa 388 |||||||||||||||||||||| Sbjct: 12348637 ttttctcactttccttctccaa 12348616
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 411 tattttacaaatggacccctag 432 |||||||||||||||||||||| Sbjct: 21684860 tattttacaaatggacccctag 21684881 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 ttttacaaatggacccctag 432 |||||||||||||||||||| Sbjct: 13909168 ttttacaaatggacccctag 13909187 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 11949032 tattttacaaatggacccct 11949013 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 11941691 tattttacaaatggacccct 11941710
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccctag 432 |||||||||||||||||||||| Sbjct: 28042458 tattttacaaatggacccctag 28042437
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccctag 432 |||||||||||||||||||||| Sbjct: 9426195 tattttacaaatggacccctag 9426174 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 16341110 tattttacaaatggacccct 16341091
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccctag 432 |||||||||||||||||||||| Sbjct: 131792 tattttacaaatggacccctag 131771
>dbj|AP003538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0059O19 Length = 144386 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccctag 432 |||||||||||||||||||||| Sbjct: 13817 tattttacaaatggacccctag 13796
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccctag 432 |||||||||||||||||||||| Sbjct: 25754 tattttacaaatggacccctag 25733
>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C12 Length = 136799 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 411 tattttacaaatggacccctag 432 |||||||||||||||||||||| Sbjct: 52430 tattttacaaatggacccctag 52451
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 411 tattttacaaatggacccctag 432 |||||||||||||||||||||| Sbjct: 145034 tattttacaaatggacccctag 145055
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 367 ttttctcactttccttctccaa 388 |||||||||||||||||||||| Sbjct: 12303007 ttttctcactttccttctccaa 12302986
>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163702 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 367 ttttctcactttccttctccaa 388 |||||||||||||||||||||| Sbjct: 63002 ttttctcactttccttctccaa 62981
>gb|AF083480.1|MMPPLD1S09 Mus musculus phospholipase D1 (PLD1) gene, exon 11, complete sequence Length = 510 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 ttttgcttctctttgaaggac 486 ||||||||||||||||||||| Sbjct: 138 ttttgcttctctttgaaggac 158
>gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, complete sequence Length = 183026 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 tagagtctgttttctcacttt 378 ||||||||||||||||||||| Sbjct: 70611 tagagtctgttttctcacttt 70631
>gb|AC124440.3| Mus musculus BAC clone RP24-176E5 from chromosome 3, complete sequence Length = 173198 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 gttttgcttctctttgaagga 485 ||||||||||||||||||||| Sbjct: 45210 gttttgcttctctttgaagga 45230
>ref|NM_001011385.2| Xenopus tropicalis hypothetical LOC496853 (LOC496853), mRNA Length = 3472 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tcttcatgttctggaagacag 192 ||||||||||||||||||||| Sbjct: 2292 tcttcatgttctggaagacag 2312
>gb|BC088568.1| Xenopus tropicalis hypothetical LOC496853, mRNA (cDNA clone MGC:97757 IMAGE:6988283), complete cds Length = 3210 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tcttcatgttctggaagacag 192 ||||||||||||||||||||| Sbjct: 2215 tcttcatgttctggaagacag 2235
>emb|AL138854.1|SPAC23G3 S.pombe chromosome I cosmid c23G3 Length = 41181 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 taaagttttgcttctctttgaagga 485 ||||||||||||||||||| ||||| Sbjct: 20465 taaagttttgcttctctttcaagga 20441
>gb|AC022919.8| Homo sapiens chromosome 18, clone RP11-46D1, complete sequence Length = 159749 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 627 gcagatgaaccatccacagcg 647 ||||||||||||||||||||| Sbjct: 70220 gcagatgaaccatccacagcg 70240
>ref|NM_001018501.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC23G3.04), partial mRNA Length = 585 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 taaagttttgcttctctttgaagga 485 ||||||||||||||||||| ||||| Sbjct: 88 taaagttttgcttctctttcaagga 64
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggaccccta 431 ||||||||||||||||||||| Sbjct: 48545 tattttacaaatggaccccta 48525 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 41591 tattttacaaatggacccct 41610
>gb|AC048380.12| Homo sapiens chromosome 18, clone RP11-426J5, complete sequence Length = 224670 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 627 gcagatgaaccatccacagcg 647 ||||||||||||||||||||| Sbjct: 1684 gcagatgaaccatccacagcg 1664
>emb|CR855420.2| Xenopus tropicalis finished cDNA, clone TNeu036d05 Length = 3472 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tcttcatgttctggaagacag 192 ||||||||||||||||||||| Sbjct: 2292 tcttcatgttctggaagacag 2312
>emb|CT009570.9| Zebrafish DNA sequence from clone CH211-185J11 in linkage group 16, complete sequence Length = 137019 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 cttgaataaatcacaagcaacaaaa 233 |||||||||||||||| |||||||| Sbjct: 73224 cttgaataaatcacaatcaacaaaa 73200
>gb|AC108425.9| Mus musculus chromosome 1, clone RP23-119I1, complete sequence Length = 187230 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 tcatcatcattatttaactc 598 |||||||||||||||||||| Sbjct: 71961 tcatcatcattatttaactc 71980
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10, complete sequence Length = 150825 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 127430 tattttacaaatggacccct 127449
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 ttttctcactttccttctcc 386 |||||||||||||||||||| Sbjct: 669848 ttttctcactttccttctcc 669829
>gb|AC118194.8| Mus musculus chromosome 3, clone RP23-464I9, complete sequence Length = 180205 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 caccatctcttcaaccatat 154 |||||||||||||||||||| Sbjct: 30245 caccatctcttcaaccatat 30264
>gb|AC150644.4| Bos taurus BAC CH240-223I2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 199501 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tgtccttcatatattttaca 419 |||||||||||||||||||| Sbjct: 139074 tgtccttcatatattttaca 139093
>gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, complete sequence Length = 173643 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 aaagttttgcttctctttga 481 |||||||||||||||||||| Sbjct: 122827 aaagttttgcttctctttga 122846
>gb|AC102509.6| Mus musculus chromosome 7, clone RP24-327G7, complete sequence Length = 186990 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 691 gttaccatttctaaatttct 710 |||||||||||||||||||| Sbjct: 42735 gttaccatttctaaatttct 42754
>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0014K18, complete sequence Length = 123508 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 51980 tattttacaaatggacccct 51999
>gb|AC123605.8| Mus musculus chromosome 5, clone RP24-176O2, complete sequence Length = 211657 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 aaagttttgcttctctttga 481 |||||||||||||||||||| Sbjct: 28946 aaagttttgcttctctttga 28965
>emb|CR391993.14| Zebrafish DNA sequence from clone DKEY-3E17 in linkage group 22, complete sequence Length = 122651 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 tgttttctcactttccttct 384 |||||||||||||||||||| Sbjct: 105811 tgttttctcactttccttct 105830 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 tgttttctcactttccttct 384 |||||||||||||||||||| Sbjct: 73912 tgttttctcactttccttct 73931
>emb|CR628327.9| Zebrafish DNA sequence from clone DKEY-246C17 in linkage group 17, complete sequence Length = 111757 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||||||| |||||||| Sbjct: 76014 ttgaataaatcacaatcaacaaaa 76037
>gb|AC146502.2| Danio rerio clone CH211-262M17, complete sequence Length = 134798 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||| |||||||||||| Sbjct: 76741 ttgaataaatcccaagcaacaaaa 76764
>emb|CR954250.6| Zebrafish DNA sequence from clone DKEY-34G4 in linkage group 8, complete sequence Length = 85279 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||||||| |||||||| Sbjct: 51976 ttgaataaatcacaatcaacaaaa 51953
>gb|AC123943.4| Mus musculus BAC clone RP23-480G20 from chromosome 12, complete sequence Length = 171251 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 tcacttctcctaaccttttc 328 |||||||||||||||||||| Sbjct: 115338 tcacttctcctaaccttttc 115319
>emb|BX284696.17| Zebrafish DNA sequence from clone DKEY-277J13 in linkage group 7, complete sequence Length = 61083 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||| |||||||||||| Sbjct: 15147 ttgaataaatcccaagcaacaaaa 15170
>emb|Z97055.1|HS388M5 Human DNA sequence from clone RP3-388M5 on chromosome 22, complete sequence Length = 177568 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 gagcctgcaaaatagagtctgttt 369 ||||||||||||||||| |||||| Sbjct: 34466 gagcctgcaaaatagagactgttt 34443
>emb|AL360220.12| Human DNA sequence from clone RP11-173B15 on chromosome 6 Contains part of the KHDRBS2 gene for KH domain containing RNA binding signal transduction associated protein 2, complete sequence Length = 108044 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 aaatcacaagcaacaaaata 235 |||||||||||||||||||| Sbjct: 107726 aaatcacaagcaacaaaata 107707
>emb|AL356775.14| Human DNA sequence from clone RP11-355M14 on chromosome 6 Contains the 3' end of the gene for popeye protein 3 (POP3), the gene for a novel protein (DKFZp434F2226), the 5' end of the BVES gene for blood epicardial substance and a CpG island, complete sequence Length = 43825 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ctgcaccatctcttcaacca 151 |||||||||||||||||||| Sbjct: 23492 ctgcaccatctcttcaacca 23511
>gb|AC025669.19| Mus musculus chromosome 14, clone RP23-5O16, complete sequence Length = 203826 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 ttttgcttctctttgaagga 485 |||||||||||||||||||| Sbjct: 125114 ttttgcttctctttgaagga 125133
>emb|CR388096.8| Zebrafish DNA sequence from clone DKEY-146L2 in linkage group 5, complete sequence Length = 139460 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 caaaatagagtctgttttct 372 |||||||||||||||||||| Sbjct: 82848 caaaatagagtctgttttct 82829
>emb|CR339044.19| Zebrafish DNA sequence from clone CH211-122G23 in linkage group 5, complete sequence Length = 177385 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 attctgccttcatatctcgc 105 |||||||||||||||||||| Sbjct: 11510 attctgccttcatatctcgc 11491
>gb|AC063947.30| Homo sapiens 12 BAC RP11-350G24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 196877 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 ttttctcactttccttctccaact 390 |||||||||||||||||| ||||| Sbjct: 141712 ttttctcactttccttctacaact 141689
>emb|BX005124.7| Zebrafish DNA sequence from clone CH211-284A16 in linkage group 20 Contains the 5' end of the xrn2 gene for 5'-3' exoribonuclease 2, a novel gene and a CpG island, complete sequence Length = 148325 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||| |||||||||||| Sbjct: 104628 ttgaataaatcccaagcaacaaaa 104651
>gb|AC099845.2| Homo sapiens chromosome 18, clone RP11-812D21, complete sequence Length = 189559 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 tctaaagttttgcttctctt 478 |||||||||||||||||||| Sbjct: 114411 tctaaagttttgcttctctt 114392
>emb|BX511246.4| Zebrafish DNA sequence from clone DKEY-238D17 in linkage group 23, complete sequence Length = 84484 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||| |||||||||||| Sbjct: 39878 ttgaataaatcccaagcaacaaaa 39901
>emb|BX465185.8| Zebrafish DNA sequence from clone CH211-39F23 in linkage group 23, complete sequence Length = 148690 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||| |||||||||||| Sbjct: 99906 ttgaataaatcccaagcaacaaaa 99883
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 tctgttttctcactttccttctcc 386 ||||||||||| |||||||||||| Sbjct: 218262 tctgttttctctctttccttctcc 218285
>gb|AC008492.3| Homo sapiens chromosome 5 clone CTC-427F23, complete sequence Length = 138127 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 467 tttgcttctctttgaaggactact 490 |||||| ||||||||||||||||| Sbjct: 90321 tttgctactctttgaaggactact 90344
>gb|AC097533.2| Homo sapiens BAC clone RP11-770K15 from 4, complete sequence Length = 174696 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 aatgtccttcatatatttta 417 |||||||||||||||||||| Sbjct: 48748 aatgtccttcatatatttta 48767
>gb|AC104657.2| Homo sapiens BAC clone RP11-567F17 from 4, complete sequence Length = 126525 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tgccttggttcacaagagcc 350 |||||||||||||||||||| Sbjct: 78205 tgccttggttcacaagagcc 78186
>emb|BX005229.30| Zebrafish DNA sequence from clone DKEY-21D17 in linkage group 17, complete sequence Length = 94988 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||||||| |||||||| Sbjct: 43661 ttgaataaatcacaatcaacaaaa 43684
>emb|BX677663.6| Zebrafish DNA sequence from clone DKEY-76N12 in linkage group 2, complete sequence Length = 143503 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||||||| |||||||| Sbjct: 72728 ttgaataaatcacaatcaacaaaa 72705
>gb|AC008621.8| Homo sapiens chromosome 5 clone CTB-147K10, complete sequence Length = 67086 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 467 tttgcttctctttgaaggactact 490 |||||| ||||||||||||||||| Sbjct: 63836 tttgctactctttgaaggactact 63859
>emb|BX072533.17| Zebrafish DNA sequence from clone CH211-158C3 in linkage group 15, complete sequence Length = 183704 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||| |||||||||||| Sbjct: 101293 ttgaataaatcccaagcaacaaaa 101316
>ref|XM_571960.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 5243 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 ttttctcactttccttctcc 386 |||||||||||||||||||| Sbjct: 343 ttttctcactttccttctcc 324
>gb|BC103355.1| Bos taurus hematopoietic cell-specific Lyn substrate 1, mRNA (cDNA clone MGC:127454 IMAGE:7949030), complete cds Length = 3126 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 tgttttctcactttccttct 384 |||||||||||||||||||| Sbjct: 1950 tgttttctcactttccttct 1969
>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds Length = 99431 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 385 ccaacttagtttcaatgtccttca 408 ||||||||| |||||||||||||| Sbjct: 99236 ccaacttagcttcaatgtccttca 99213 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 ccaacttagtttcaatgtccttca 408 ||||||||| |||||||||||||| Sbjct: 65995 ccaacttagcttcaatgtccttca 66018
>emb|AL116210.1|CNS01D0A Botrytis cinerea strain T4 cDNA library Length = 679 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ctgcatacatgttcttcgcc 131 |||||||||||||||||||| Sbjct: 103 ctgcatacatgttcttcgcc 122
>emb|AL115405.1|CNS01CDX Botrytis cinerea strain T4 cDNA library Length = 780 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ctgcatacatgttcttcgcc 131 |||||||||||||||||||| Sbjct: 185 ctgcatacatgttcttcgcc 204
>emb|AL115041.1|CNS01C3T Botrytis cinerea strain T4 cDNA library Length = 840 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ctgcatacatgttcttcgcc 131 |||||||||||||||||||| Sbjct: 141 ctgcatacatgttcttcgcc 160
>emb|AL114416.1|CNS01BMG Botrytis cinerea strain T4 cDNA library Length = 840 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ctgcatacatgttcttcgcc 131 |||||||||||||||||||| Sbjct: 103 ctgcatacatgttcttcgcc 122
>emb|AL112763.1|CNS01ACJ Botrytis cinerea strain T4 cDNA library Length = 660 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ctgcatacatgttcttcgcc 131 |||||||||||||||||||| Sbjct: 152 ctgcatacatgttcttcgcc 171
>emb|AL111441.1|CNS019BT Botrytis cinerea strain T4 cDNA library Length = 660 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ctgcatacatgttcttcgcc 131 |||||||||||||||||||| Sbjct: 152 ctgcatacatgttcttcgcc 171
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 19799356 tattttacaaatggacccct 19799375
>gb|AC012671.7| Homo sapiens BAC clone RP11-554H10 from 2, complete sequence Length = 198694 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 acatgttcttcgccctgcac 137 |||||||||||||||||||| Sbjct: 166286 acatgttcttcgccctgcac 166267
>gb|AC106053.6| Homo sapiens BAC clone RP11-818B6 from 2, complete sequence Length = 178810 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 aaatcacaagcaacaaaata 235 |||||||||||||||||||| Sbjct: 17651 aaatcacaagcaacaaaata 17670
>gb|AC021072.27| Homo sapiens 12 BAC RP11-624J6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55034 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 cttcattgccatccaggtca 581 |||||||||||||||||||| Sbjct: 38820 cttcattgccatccaggtca 38801
>gb|AC013718.6| Homo sapiens BAC clone RP11-116I17 from 2, complete sequence Length = 177855 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ctcaatggcaaggttctgac 282 |||||||||||||||||||| Sbjct: 28555 ctcaatggcaaggttctgac 28536
>dbj|AP004012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1568_D07 Length = 83857 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 36211 tattttacaaatggacccct 36192
>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0008F02 Length = 139655 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 17673 tattttacaaatggacccct 17654
>dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0024C06 Length = 177529 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 527 tattttacaaatggacccct 508
>dbj|AP004561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0465H09 Length = 148590 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 ttttacaaatggacccctag 432 |||||||||||||||||||| Sbjct: 116887 ttttacaaatggacccctag 116906
>emb|AL845493.5| Zebrafish DNA sequence from clone DKEYP-77C8 in linkage group 20, complete sequence Length = 176916 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||||||| |||||||| Sbjct: 30447 ttgaataaatcacaatcaacaaaa 30424
>dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_D12 Length = 105521 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 ttttacaaatggacccctag 432 |||||||||||||||||||| Sbjct: 53563 ttttacaaatggacccctag 53582
>dbj|AP005487.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1212_C09 Length = 120818 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 98177 tattttacaaatggacccct 98158 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tattttacaaatggacccct 430 |||||||||||||||||||| Sbjct: 90836 tattttacaaatggacccct 90855
>emb|CR392368.7| Zebrafish DNA sequence from clone DKEY-86E18 in linkage group 20, complete sequence Length = 87973 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 ataagcagatgaaccatcca 642 |||||||||||||||||||| Sbjct: 84590 ataagcagatgaaccatcca 84609
>emb|BX936298.17| Zebrafish DNA sequence from clone DKEY-78L4 in linkage group 22, complete sequence Length = 234949 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 tgttttctcactttccttct 384 |||||||||||||||||||| Sbjct: 52925 tgttttctcactttccttct 52906
>dbj|AP006278.1| Homo sapiens genomic DNA, chromosome 8q22.1, clone: KB1573B4, complete sequence Length = 157927 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 aaatcacaagcaacaaaata 235 |||||||||||||||||||| Sbjct: 139947 aaatcacaagcaacaaaata 139928
>dbj|AP002796.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-742N3, complete sequences Length = 93845 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ctagcttcagggatcttcat 178 |||||||||||||||||||| Sbjct: 34541 ctagcttcagggatcttcat 34522
>emb|BX005081.6| Zebrafish DNA sequence from clone CH211-69M16 in linkage group 7, complete sequence Length = 168607 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||| |||||||||||| Sbjct: 17178 ttgaataaatcccaagcaacaaaa 17155
>gb|AC003019.1|AC003019 Mus musculus Chromosome 4 BAC clone BacB6, complete sequence Length = 138473 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 tttcaatgtccttcatatatttta 417 |||||||||||||||| ||||||| Sbjct: 58563 tttcaatgtccttcatttatttta 58586
>gb|AC124747.3| Mus musculus BAC clone RP23-243O9 from 12, complete sequence Length = 208779 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 tcacttctcctaaccttttc 328 |||||||||||||||||||| Sbjct: 25143 tcacttctcctaaccttttc 25124
>emb|AL953896.11| Zebrafish DNA sequence from clone CH211-119O8, complete sequence Length = 158018 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||||||| |||||||| Sbjct: 138665 ttgaataaatcacaatcaacaaaa 138642
>ref|NM_001035057.1| Bos taurus hematopoietic cell-specific Lyn substrate 1 (HCLS1), mRNA Length = 3126 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 tgttttctcactttccttct 384 |||||||||||||||||||| Sbjct: 1950 tgttttctcactttccttct 1969
>gb|AC168267.1| Mus musculus BAC clone RP23-431L24 from chromosome 3, complete sequence Length = 187466 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 caccatctcttcaaccatat 154 |||||||||||||||||||| Sbjct: 39061 caccatctcttcaaccatat 39042
>emb|AL929282.5| Zebrafish DNA sequence from clone CH211-163L21, complete sequence Length = 131005 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 ttgaataaatcacaagcaacaaaa 233 ||||||||||||||| |||||||| Sbjct: 85217 ttgaataaatcacaatcaacaaaa 85194
>dbj|AP003112.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1288E10 Length = 144703 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 aaatcacaagcaacaaaata 235 |||||||||||||||||||| Sbjct: 15020 aaatcacaagcaacaaaata 15001 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,699,449 Number of Sequences: 3902068 Number of extensions: 7699449 Number of successful extensions: 168265 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 167525 Number of HSP's gapped (non-prelim): 740 length of query: 728 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 705 effective length of database: 17,143,297,704 effective search space: 12086024881320 effective search space used: 12086024881320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)