ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbasdk18 | 750 | AV928499 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdk15 | 351 | AV928498 | not_full | gb|AY112270.1| Zea mays CL38706_1 mRNA sequence Length = 821 | 19 | not_full | GUAA_BACCR (Q81IS3) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (Glutamine amidotransferase) (GMP synthetase) Length = 515 | 1 | -- | --- | - | -- | --- | - |
| rbasdk14 | 674 | AV928497 | not_full | gb|AY857760.1| Triticum monococcum peroxidase 6 (POX6) mRNA, complete cds Length = 1308 | 229 | not_full | PERP7_BRARA (P00434) Peroxidase P7 (EC 1.11.1.7) (TP7) Length = 296 | 114 | -- | --- | - | -- | --- | - |
| rbasdk13 | 189 | AV928496 | not_full | emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73) Length = 6260 | 26 | not_full | Y2815_BORBU (P70841) Hypothetical lipoprotein BBD15 precursor Length = 98 | 2 | -- | --- | - | -- | --- | - |
| rbasdk09 | 671 | AV928495 | not_full | emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for S-adenosylmethionine decarboxylase Length = 1893 | 81 | not_full | DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 | 28 | -- | --- | - | -- | --- | - |
| rbasdk07 | 664 | AV928494 | not_full | emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73) Length = 6260 | 221 | not_full | GUB2_HORVU (P12257) Lichenase-2 precursor (EC 3.2.1.73) (Lichenase II) (Endo-beta-1,3-1,4 glucanase II)3,1->4)-beta-glucanase isoenzyme EII) (Fragment) Length = 312 | 49 | -- | --- | - | -- | --- | - |
| rbasdk06 | 707 | AV928493 | not_full | emb|AJ495775.1|HVU495775 Hordeum vulgare mRNA for putative MAP kinase Length = 2276 | 62 | not_full | ERF2_CANMA (Q9HGI7) Eukaryotic peptide chain release factor GTP-binding subunit (ERF2) (Translation release factor 3) (Polypeptide release factor 3) (ERF3) (ERF-3) Length = 712 | 14 | -- | --- | - | -- | --- | - |
| rbasdk05 | 724 | AV928492 | not_full | emb|AJ495775.1|HVU495775 Hordeum vulgare mRNA for putative MAP kinase Length = 2276 | 62 | not_full | ERF2_CANMA (Q9HGI7) Eukaryotic peptide chain release factor GTP-binding subunit (ERF2) (Translation release factor 3) (Polypeptide release factor 3) (ERF3) (ERF-3) Length = 712 | 9 | -- | --- | - | -- | --- | - |
| rbasdk04 | 699 | AV928491 | not_full | emb|X16000.1|HVGLN2 Hordeum vulgare mRNA for glutamine synthetase precursor (EC 6.3.1.2) Length = 1549 | 398 | not_full | GLNA2_HORVU (P13564) Glutamine synthetase leaf isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Chloroplast GS2) Length = 434 | 225 | -- | --- | - | -- | --- | - |
| rbasdk03 | 640 | AV928490 | not_full | dbj|AK105879.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C10, full insert sequence Length = 1012 | 48 | not_full | YQEI_BACSU (P54454) Hypothetical UPF0044 protein yqeI Length = 96 | 15 | -- | --- | - | -- | --- | - |
| rbasdk01 | 739 | AV928489 | not_full | emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8H10 Length = 87503 | 17 | not_full | YNI7_YEAST (P48231) Hypothetical 132.5 kDa protein in TOP2-MKT1 intergenic region Length = 1178 | 1 | -- | --- | - | -- | --- | - |
| rbasdj24 | 698 | AV928488 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdj23 | 741 | AV928487 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdj22 | 690 | AV928486 | not_full | gb|AY103700.1| Zea mays PCO104752 mRNA sequence Length = 837 | 58 | not_full | NUYM_BOVIN (Q02375) NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) Length = 175 | 31 | -- | --- | - | -- | --- | - |
| rbasdj20 | 525 | AV928485 | not_full | ref|NM_194132.2| Oryza sativa (japonica cultivar-group), mRNA Length = 559 | 102 | not_full | AREG_HUMAN (P15514) Amphiregulin precursor (AR) (Colorectum cell-derived growth factor) (CRDGF) Length = 252 | 14 | -- | --- | - | -- | --- | - |
| rbasdj19 | 714 | AV928484 | not_full | emb|Z48563.1|HVADPGPM2 H.vulgare mRNA for ADP-glucose pyrophosphorylase small subunit (1902 bp) Length = 1902 | 165 | not_full | GLGS_HORVU (P55238) Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) Length = 513 | 121 | -- | --- | - | -- | --- | - |
| rbasdj18 | 692 | AV928483 | not_full | gb|BT009646.1| Triticum aestivum clone wrsu1.pk0006.a3:fis, full insert mRNA sequence Length = 936 | 53 | not_full | YFGH_ECOLI (P65290) Hypothetical lipoprotein yfgH precursor Length = 172 | 5 | -- | --- | - | -- | --- | - |
| rbasdj17 | 838 | AV928482 | not_full | emb|X04133.1|HVUBIQR Barley mRNA for ubiquitin polyprecursor fragment Length = 703 | 500 | not_full | UBIQ_WHEAT (P69326) Ubiquitin Length = 76 | 177 | -- | --- | - | -- | --- | - |
| rbasdj16 | 712 | AV928481 | not_full | gb|AF475129.1| Triticum aestivum elongation factor mRNA, partial cds Length = 504 | 370 | not_full | EF2_BETVU (O23755) Elongation factor 2 (EF-2) Length = 843 | 370 | -- | --- | - | -- | --- | - |
| rbasdj15 | 756 | AV928480 | not_full | gb|AY552749.1| Hordeum vulgare subsp. vulgare 18S ribosomal RNA gene, partial sequence Length = 1014 | 500 | not_full | PSBR_HORVU (Q40070) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 138 | 16 | -- | --- | - | -- | --- | - |
| rbasdj14 | 649 | AV928479 | not_full | ref|NM_190168.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 | 153 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbasdj13 | 665 | AV928478 | not_full | ref|XM_469410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1710 | 16 | not_full | CU24_ARADI (P80516) Adult-specific rigid cuticular protein 12.4 (ACP 12.4) Length = 126 | 7 | -- | --- | - | -- | --- | - |
| rbasdj12 | 722 | AV928477 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdj11 | 685 | AV928476 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdj10 | 204 | AV928475 | not_full | gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete sequence Length = 191358 | 21 | not_full | CD59_RAT (P27274) CD59 glycoprotein precursor (Membrane attack complex inhibition factor) (MACIF) (MAC-inhibitory protein) (MAC-IP) (Protectin) Length = 126 | 2 | -- | --- | - | -- | --- | - |
| rbasdj09 | 360 | AV928474 | not_full | emb|Z49841.1|HJCHRBPCX H.jubatum chloroplast rbcL gene for ribulosebiphosphate carboxylase Length = 1431 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdj08 | 737 | AV928473 | not_full | dbj|AK068085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131P13, full insert sequence Length = 1515 | 9 | not_full | APAG_RHILO (Q98BB4) Protein apaG Length = 130 | 47 | -- | --- | - | -- | --- | - |
| rbasdj06 | 273 | AV928472 | not_full | gb|AY522625.1| Oreochromis mossambicus nascent polypeptide-associated complex alpha polypeptide-like mRNA, partial sequence Length = 461 | 39 | not_full | UL52_HHV6U (P52467) DNA helicase/primase complex protein Length = 860 | 5 | -- | --- | - | -- | --- | - |
| rbasdj04 | 641 | AV836864 | not_full | dbj|AK065015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F10, full insert sequence Length = 1818 | 44 | not_full | AMGO1_MOUSE (Q80ZD8) Amphoterin-induced protein 1 precursor (Alivin-2) Length = 492 | 5 | -- | --- | - | -- | --- | - |
| rbasdj03 | 153 | AV928471 | not_full | emb|CR699832.2|CNS0G2XW Tetraodon nigroviridis full-length cDNA Length = 1378 | 3 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbasdj01 | 854 | AV928470 | not_full | gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 | 500 | not_full | UBIQ_WHEAT (P69326) Ubiquitin Length = 76 | 183 | -- | --- | - | -- | --- | - |
| rbasdi24 | 678 | AV928469 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdi23 | 710 | AV928468 | not_full | dbj|AK064983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C13, full insert sequence Length = 2881 | 20 | not_full | EXOC5_ARATH (Q8RVQ5) Exocyst complex component 5 (Exocyst complex component Sec10) Length = 829 | 17 | -- | --- | - | -- | --- | - |
| rbasdi22 | 477 | AV928467 | not_full | gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 | 500 | not_full | NO12B_MEDSA (Q40339) Early nodulin 12B precursor (N-12B) Length = 113 | 1 | -- | --- | - | -- | --- | - |
| rbasdi20 | 832 | AV928466 | not_full | emb|X04133.1|HVUBIQR Barley mRNA for ubiquitin polyprecursor fragment Length = 703 | 500 | not_full | UBIQ_WHEAT (P69326) Ubiquitin Length = 76 | 174 | -- | --- | - | -- | --- | - |
| rbasdi18 | 584 | AV928465 | not_full | emb|Y08490.1|HVATUB2 H.vulgare mRNA for alpha-tubulin 2 Length = 1708 | 500 | not_full | TBA_WHEAT (Q9ZRB7) Tubulin alpha chain Length = 451 | 407 | -- | --- | - | -- | --- | - |
| rbasdi17 | 741 | AV928464 | not_full | gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine synthetase 1 mRNA, complete cds Length = 1973 | 151 | not_full | ASNS_ASPOF (P31752) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (AS) Length = 589 | 34 | -- | --- | - | -- | --- | - |
| rbasdi16 | 726 | AV928463 | not_full | gb|AC137001.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012L23, complete sequence Length = 121659 | 63 | not_full | KCNQ4_HUMAN (P56696) Potassium voltage-gated channel subfamily KQT member 4 (Voltage-gated potassium channel subunit Kv7.4) (Potassium channel alpha subunit KvLQT4) (KQT-like 4) Length = 695 | 4 | -- | --- | - | -- | --- | - |
| rbasdi15 | 755 | AV928462 | not_full | gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 | 29 | not_full | KCNQ4_HUMAN (P56696) Potassium voltage-gated channel subfamily KQT member 4 (Voltage-gated potassium channel subunit Kv7.4) (Potassium channel alpha subunit KvLQT4) (KQT-like 4) Length = 695 | 2 | -- | --- | - | -- | --- | - |
| rbasdi14 | 637 | AV928461 | not_full | emb|X59983.1|BNRPS15A B.napus mRNA for ribosomal protein S15a (pPCB8) Length = 757 | 500 | not_full | RS15A_ARATH (P42798) 40S ribosomal protein S15a Length = 129 | 324 | -- | --- | - | -- | --- | - |
| rbasdi13 | 638 | AV928460 | not_full | emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for S-adenosylmethionine decarboxylase Length = 1893 | 75 | not_full | DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 | 26 | -- | --- | - | -- | --- | - |
| rbasdi12 | 736 | AV836863 | not_full | ref|NM_187916.1| Oryza sativa (japonica cultivar-group), Ozsa8358 predicted mRNA Length = 3594 | 20 | not_full | HSCB_HAEIN (Q57006) Co-chaperone protein hscB homolog Length = 174 | 2 | -- | --- | - | -- | --- | - |
| rbasdi11 | 421 | AV928459 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 32 | not_full | B3A3_RABIT (O18917) Anion exchange protein 3 (Neuronal band 3-like protein) (Solute carrier family 4 member 3) (Anion exchanger 3 brain isoform) Length = 1233 | 2 | -- | --- | - | -- | --- | - |
| rbasdi10 | 662 | AV928458 | not_full | emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for S-adenosylmethionine decarboxylase Length = 1893 | 79 | not_full | DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 | 26 | -- | --- | - | -- | --- | - |
| rbasdi09 | 687 | AV928457 | not_full | gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 | 461 | not_full | RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 | 161 | -- | --- | - | -- | --- | - |
| rbasdi08 | 732 | AV928456 | not_full | gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 | 36 | not_full | ISW2_ORYSA (Q7G8Y3) Putative chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) Length = 1107 | 4 | -- | --- | - | -- | --- | - |
| rbasdi06 | 328 | AV928455 | not_full | emb|X97771.1|HVPSII10K H.vulgare mRNA for PSII 10kD protein Length = 575 | 51 | not_full | PSBR_HORVU (Q40070) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 138 | 16 | -- | --- | - | -- | --- | - |
| rbasdi05 | 284 | AV928454 | not_full | emb|X97771.1|HVPSII10K H.vulgare mRNA for PSII 10kD protein Length = 575 | 48 | not_full | PSBR_HORVU (Q40070) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 138 | 13 | -- | --- | - | -- | --- | - |
| rbasdi04 | 648 | AV928453 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbasdi03 | 701 | AV928452 | not_full | emb|Y09741.1|HVBTUBI Hordeum vulgare mRNA for beta-tubulin 1 Length = 1646 | 500 | not_full | TBB_HORVU (P93176) Tubulin beta chain (Beta tubulin) Length = 447 | 384 | -- | --- | - | -- | --- | - |
