Clone Name | rbasdj13 |
---|---|
Clone Library Name | barley_pub |
>CU24_ARADI (P80516) Adult-specific rigid cuticular protein 12.4 (ACP 12.4)| Length = 126 Score = 32.0 bits (71), Expect = 1.7 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = -2 Query: 343 MLCGEGVYSQSFNNNGIIAHSRVASGCVGPVIDDYIYGD 227 M G Y+ FN HSRV SG G + Y Y D Sbjct: 5 MTLAGGAYNFGFNTGDATGHSRVESGTAGSAVGSYSYID 43
>DREB_CHICK (P18302) Drebrin (Developmentally-regulated brain protein)| Length = 651 Score = 30.8 bits (68), Expect = 3.8 Identities = 29/93 (31%), Positives = 36/93 (38%) Frame = +3 Query: 315 CEYTPSPHSIFSNSMSRPRKLSLVGCAILLPWYSQYMQRVSSVPGGVTLTGQHKRTLVPS 494 C TP+ S F S S RK+S GC S +S P G +RT P+ Sbjct: 349 CHRTPNLSSFFPCSQSDYRKVSAAGC-------SPCESSPASTPLG------EQRTRAPA 395 Query: 495 LGHSAKKSIGGVPAEWVARKLMWEQRYQPLPGP 593 A P+ VA EQ + P PGP Sbjct: 396 EETPATPKDSPSPSTQVAEPAATEQHW-PFPGP 427
>NFCP_CONPS (Q95W11) GFP-like non-fluorescent chromoprotein (cpCP)| Length = 227 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 11/56 (19%) Frame = -2 Query: 649 YKLHVICGVNEHVDGPVRRGPGKGWYRCSHI-----------NFLATHSAGTPPML 515 YK+ V+ G N DGPV + GW C+ I N +A +G PP++ Sbjct: 117 YKVKVL-GTNFPADGPVMKNISGGWEPCTEIVYQDNGVLRGRNVMALKVSGRPPLI 171
>DHX34_MOUSE (Q9DBV3) Probable ATP-dependent RNA helicase DHX34 (EC 3.6.1.-)| (DEAH box protein 34) Length = 1145 Score = 30.8 bits (68), Expect = 3.8 Identities = 20/73 (27%), Positives = 32/73 (43%) Frame = +1 Query: 310 MTVNTPLLRIASSQTRCRAHGNSPLLGVQSYYHGTHSTCNVFLQCLEVSRSQDSTSAPWC 489 ++V +P R A S C A PL +S + NVF ++V + S WC Sbjct: 614 LSVQSPFTRSAQSNLDC-ATARRPL---ESDQGDPFTLFNVFNAWVQVKSERSGNSRKWC 669 Query: 490 HRWDIQQRRALEV 528 R +++ R E+ Sbjct: 670 RRRGVEEHRLYEM 682
>GUAA_SYNPX (Q7UA53) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 528 Score = 30.4 bits (67), Expect = 5.0 Identities = 22/56 (39%), Positives = 26/56 (46%) Frame = +1 Query: 271 LPHGCVR*SHCC*MTVNTPLLRIASSQTRCRAHGNSPLLGVQSYYHGTHSTCNVFL 438 LP G VR +H T NTP +A Q R L GVQ + HSTC + L Sbjct: 147 LPEGFVRLAH----TANTPEAAVAHLQRR--------LYGVQFHPEVVHSTCGMAL 190
>YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 precursor| Length = 1317 Score = 30.4 bits (67), Expect = 5.0 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = -3 Query: 594 GGLAKAGTVAPTSTSLLPILRVHLQCSSLLNVPTMAPRCACAVL 463 G LA T TST +PI+R+ + +VPT C VL Sbjct: 79 GVLAFKTTTIETSTKFIPIVRIDSTTAETTSVPTTTTSIQCGVL 122
>NFCP_CONGI (Q95W86) GFP-like non-fluorescent chromoprotein (cgCP)| Length = 227 Score = 30.0 bits (66), Expect = 6.5 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 11/56 (19%) Frame = -2 Query: 649 YKLHVICGVNEHVDGPVRRGPGKGWYRCSHI-----------NFLATHSAGTPPML 515 YK+ V+ G N DGPV + GW C+ I N +A +G PP++ Sbjct: 117 YKVKVL-GTNFPADGPVMKKISGGWEPCTEIVYQDNGVLRGRNVMALKVSGRPPLI 171 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,961,817 Number of Sequences: 219361 Number of extensions: 2285924 Number of successful extensions: 5928 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 5632 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5922 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)