>NUYM_BOVIN (Q02375) NADH-ubiquinone oxidoreductase 18 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ)
           (CI-AQDQ)
          Length = 175

 Score =  110 bits (274), Expect = 5e-24
 Identities = 51/110 (46%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
 Frame = -3

Query: 526 EIGMVSGIPEEHLR-RKVLIYSPARTASQQGSGKVGRWKINFVSTQKWENPLMGWTSTGD 350
           +I  ++G+PEEH++ RK  I+ PAR   Q G     +WK+ F + ++WENPLMGW ST D
Sbjct: 60  DITTITGVPEEHIKTRKARIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 349 PYANVGEAGLTFDSAESAKAFADKHGWEYVVRKRHTPLLKPKTYAENFKW 200
           P +N+    LTF + E A AFA+K+GW Y V +R  P  K K+Y  NF W
Sbjct: 120 PLSNL---VLTFSTKEDAVAFAEKNGWSYDVEERKVPKPKSKSYGANFSW 166

>NUYM_MOUSE (Q9CXZ1) NADH-ubiquinone oxidoreductase 18 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ)
           (CI-AQDQ)
          Length = 175

 Score =  109 bits (272), Expect = 9e-24
 Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
 Frame = -3

Query: 526 EIGMVSGIPEEHLR-RKVLIYSPARTASQQGSGKVGRWKINFVSTQKWENPLMGWTSTGD 350
           +I  ++G+PEEH++ RKV I+ PAR   Q G     +WK+ F + ++WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 349 PYANVGEAGLTFDSAESAKAFADKHGWEYVVRKRHTPLLKPKTYAENFKW 200
           P +N+    LTF + E A AFA+K+GW Y V ++  P  K K+Y  NF W
Sbjct: 120 PLSNM---VLTFSAKEDAIAFAEKNGWSYDVEEKKVPKPKSKSYGANFSW 166

>NUYM_HUMAN (O43181) NADH-ubiquinone oxidoreductase 18 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ)
           (CI-AQDQ)
          Length = 175

 Score =  109 bits (272), Expect = 9e-24
 Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
 Frame = -3

Query: 526 EIGMVSGIPEEHLR-RKVLIYSPARTASQQGSGKVGRWKINFVSTQKWENPLMGWTSTGD 350
           +I  ++G+PEEH++ RKV I+ PAR   Q G     +WK+ F + ++WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 349 PYANVGEAGLTFDSAESAKAFADKHGWEYVVRKRHTPLLKPKTYAENFKW 200
           P +N+    LTF + E A +FA+K+GW Y + +R  P  K K+Y  NF W
Sbjct: 120 PLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSW 166

>NUYM_NEUCR (P25711) NADH-ubiquinone oxidoreductase 21 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-21KD) (CI-21KD)
          Length = 218

 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 44/107 (41%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
 Frame = -3

Query: 517 MVSGIPEEHLRRKVLIYSPARTASQQGSGKVGRWKINFVSTQK---WENPLMGWTSTGDP 347
           +VSG P E   R V IY P++ A+Q  + +V  W++++   +K   WEN LMGW S+GD 
Sbjct: 103 VVSGAPMELQARTVRIYLPSKPATQSSNSRV-LWRMDWDVLEKGHRWENELMGWQSSGD- 160

Query: 346 YANVGEAGLTFDSAESAKAFADKHGWEYVVRKRHTPLLKPKTYAENF 206
              V    LTF + E A  FA+K G+EY V++ +     PK YA NF
Sbjct: 161 --FVQGTHLTFRTKEEAIQFAEKQGYEYFVQEPNQRHFTPKAYANNF 205

>NUO2_SOLTU (P80268) NADH-ubiquinone oxidoreductase 18 kDa subunit (EC 1.6.5.3)|
           (EC 1.6.99.3) (Complex I-18KD) (CI-18KD) (Fragment)
          Length = 30

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -3

Query: 559 ASDALVEIKRGEIGMVSGIPEEHLRRKVLI 470
           AS+ALVEIK GEIGMVSGIP+EHLRR V+I
Sbjct: 1   ASEALVEIKPGEIGMVSGIPDEHLRRFVVI 30

>FOS_MESAU (O88479) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 381

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 20/71 (28%), Positives = 38/71 (53%)
 Frame = -3

Query: 688 LLSPSPLSGARLRRDGRPTPAGLPPPSAGLFSRLRRARMLSAEASDALVEIKRGEIGMVS 509
           L+ P+ +S     +   P P G+P PS G +SR    + +S   + ++   +RG++  +S
Sbjct: 76  LVQPTLVSSVAPSQTRAPHPYGVPTPSTGAYSRAGMVKTVSGGRAQSIG--RRGKVEQLS 133

Query: 508 GIPEEHLRRKV 476
             PEE  +R++
Sbjct: 134 --PEEEEKRRI 142

>FOS_CRIGR (Q9Z2Q8) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 381

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 20/71 (28%), Positives = 38/71 (53%)
 Frame = -3

Query: 688 LLSPSPLSGARLRRDGRPTPAGLPPPSAGLFSRLRRARMLSAEASDALVEIKRGEIGMVS 509
           L+ P+ +S     +   P P G+P PSAG +SR    + +S   + ++   +R ++  +S
Sbjct: 76  LVQPTLVSSVAPSQTRAPHPYGVPTPSAGAYSRAAMVKTVSGGRAQSI--SRRSKVEQLS 133

Query: 508 GIPEEHLRRKV 476
             PEE  +R++
Sbjct: 134 --PEEEEKRRI 142

>FOS_PIG (O97930) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 380

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 20/71 (28%), Positives = 38/71 (53%)
 Frame = -3

Query: 688 LLSPSPLSGARLRRDGRPTPAGLPPPSAGLFSRLRRARMLSAEASDALVEIKRGEIGMVS 509
           L+ P+ +S     +   P P G+P PSAG +SR    + +    + ++   +RG++  +S
Sbjct: 76  LVQPTLVSSVAPSQTRAPHPYGVPTPSAGAYSRAGAVKTMPGGRAQSIG--RRGKVEQLS 133

Query: 508 GIPEEHLRRKV 476
             PEE  +R++
Sbjct: 134 --PEEEEKRRI 142

>FOS_HUMAN (P01100) Proto-oncogene protein c-fos (Cellular oncogene fos)|
           (G0/G1 switch regulatory protein 7)
          Length = 380

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 20/71 (28%), Positives = 39/71 (54%)
 Frame = -3

Query: 688 LLSPSPLSGARLRRDGRPTPAGLPPPSAGLFSRLRRARMLSAEASDALVEIKRGEIGMVS 509
           L+ P+ +S     +   P P G+P PSAG +SR    + ++   + ++   +RG++  +S
Sbjct: 76  LVQPALVSSVAPSQTRAPHPFGVPAPSAGAYSRAGVVKTMTGGRAQSIG--RRGKVEQLS 133

Query: 508 GIPEEHLRRKV 476
             PEE  +R++
Sbjct: 134 --PEEEEKRRI 142

>FOSX_MSVFR (P29176) Transforming protein v-Fos/v-Fox|
          Length = 244

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 20/71 (28%), Positives = 39/71 (54%)
 Frame = -3

Query: 688 LLSPSPLSGARLRRDGRPTPAGLPPPSAGLFSRLRRARMLSAEASDALVEIKRGEIGMVS 509
           L+ P+ +S     +   P P GLP  SAG ++R    + +S   + ++   +RG++  +S
Sbjct: 52  LVQPTLVSSVAPSQTRAPHPYGLPTQSAGAYARAGMVKTVSGGRAQSIG--RRGKVEQLS 109

Query: 508 GIPEEHLRRKV 476
             PEE ++R++
Sbjct: 110 --PEEEVKRRI 118

>FOS_FELCA (Q8HZP6) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 381

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 21/71 (29%), Positives = 38/71 (53%)
 Frame = -3

Query: 688 LLSPSPLSGARLRRDGRPTPAGLPPPSAGLFSRLRRARMLSAEASDALVEIKRGEIGMVS 509
           L+ P+ +S     +   P P G+P PSAG +SR    + ++A      +  +RG++  +S
Sbjct: 76  LVQPTLVSSVAPSQTRAPHPYGVPAPSAGAYSRAGVVKTVTAGGRAQSIG-RRGKVEQLS 134

Query: 508 GIPEEHLRRKV 476
             PEE  +R++
Sbjct: 135 --PEEEEKRRI 143

>FOS_RAT (P12841) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 380

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 20/71 (28%), Positives = 38/71 (53%)
 Frame = -3

Query: 688 LLSPSPLSGARLRRDGRPTPAGLPPPSAGLFSRLRRARMLSAEASDALVEIKRGEIGMVS 509
           L+ P+ +S     +   P P GLP PS G ++R    + +S   + ++   +RG++  +S
Sbjct: 76  LVQPTLVSSVAPSQTRAPHPYGLPTPSTGAYARAGVVKTMSGGRAQSIG--RRGKVEQLS 133

Query: 508 GIPEEHLRRKV 476
             PEE  +R++
Sbjct: 134 --PEEEEKRRI 142

>FOS_BOVIN (O77628) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 380

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 20/71 (28%), Positives = 39/71 (54%)
 Frame = -3

Query: 688 LLSPSPLSGARLRRDGRPTPAGLPPPSAGLFSRLRRARMLSAEASDALVEIKRGEIGMVS 509
           L+ P+ +S     +   P P G+P PSAG +SR    + ++   + ++   +RG++  +S
Sbjct: 76  LVQPTLVSSVAPSQTRAPHPYGVPTPSAGAYSRAGVMKTMTGGRAQSIG--RRGKVEQLS 133

Query: 508 GIPEEHLRRKV 476
             PEE  +R++
Sbjct: 134 --PEEEEKRRI 142

>MYSC_ACACA (P10569) Myosin IC heavy chain|
          Length = 1168

 Score = 27.7 bits (60), Expect(2) = 0.41
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = -2

Query: 593  SPTPGADALRGGLR-CPRGDQARGDRHGLRDPRG--APPPQG 477
            +P PG    RGG    P G  ARG   G+  PRG   PPP G
Sbjct: 1129 APPPGGMRGRGGPGPAPPGGMARG---GMMPPRGRAGPPPPG 1167



 Score = 25.0 bits (53), Expect(2) = 0.41
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -3

Query: 679  PSPLSGARLRRDGRPTPAGLPPPSAG 602
            P P+ G      G P   G PPP AG
Sbjct: 1065 PGPMRGRGGPAPGGPGRGGAPPPGAG 1090

>FOS_MSVFB (P01102) p55-v-fos transforming protein|
          Length = 381

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 20/71 (28%), Positives = 38/71 (53%)
 Frame = -3

Query: 688 LLSPSPLSGARLRRDGRPTPAGLPPPSAGLFSRLRRARMLSAEASDALVEIKRGEIGMVS 509
           L+ P+ +S     +   P P GLP  SAG ++R    + +S   + ++   +RG++  +S
Sbjct: 76  LVQPTLVSSVAPSQTRAPHPYGLPTQSAGAYARAEMVKTVSGGRAQSIG--RRGKVEQLS 133

Query: 508 GIPEEHLRRKV 476
             PEE  +R++
Sbjct: 134 --PEEEEKRRI 142

>PPME1_NEUCR (Q7SGG8) Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1)|
          Length = 454

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 502 PEEHLRRKVLIYSPARTASQQGSGKVGRWKINFVSTQK-WENPLMG 368
           P E L+R  L   P   A  QG+ K  RWK +  +TQ  WE+  +G
Sbjct: 322 PVEELQRPELQQLPRGVAGTQGTAKPWRWKTDLAATQPFWEDWFVG 367

>FOS_MOUSE (P01101) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 380

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 20/71 (28%), Positives = 38/71 (53%)
 Frame = -3

Query: 688 LLSPSPLSGARLRRDGRPTPAGLPPPSAGLFSRLRRARMLSAEASDALVEIKRGEIGMVS 509
           L+ P+ +S     +   P P GLP  SAG ++R    + +S   + ++   +RG++  +S
Sbjct: 76  LVQPTLVSSVAPSQTRAPHPYGLPTQSAGAYARAGMVKTVSGGRAQSIG--RRGKVEQLS 133

Query: 508 GIPEEHLRRKV 476
             PEE  +R++
Sbjct: 134 --PEEEEKRRI 142

>KNIR_DROVI (Q24753) Zygotic gap protein knirps|
          Length = 481

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +1

Query: 13  QIQLQCVLITRLMETCSSSYCTTGMEQSKISTSGREKEHLLKISRQHTNP 162
           Q++ +C  IT    +CSSS  T+    S  ST     E  + + RQ  NP
Sbjct: 409 QLEAECTTITNTTNSCSSSTSTSSSNSSTSST-----EAAVAVKRQKLNP 453

>M1200_ARATH (P92550) Hypothetical mitochondrial protein AtMg01200 (ORF294)|
          Length = 294

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 643 GRPTPAGLPPPSAGLFSRLRRARMLSAEASDALVEIKR 530
           G P P   PPP A  +SR+ RA  L A   +   +++R
Sbjct: 165 GSPDPVSPPPPIASFYSRIERAESLHAGNIELAEDLQR 202

>NOP3_YEAST (Q01560) Nucleolar protein 3 (Mitochondrial targeting suppressor 1|
           protein) (Nuclear polyadenylated RNA-binding protein 1)
          Length = 414

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = -2

Query: 581 GADALRGGLRCPRGDQARGDRHGLRDPRGAPPPQGS 474
           G D+ RGG   PRG  +RG   G R+  G  PP+GS
Sbjct: 346 GYDSPRGGYDSPRGGYSRGGYGGPRNDYG--PPRGS 379

>REEP1_MOUSE (Q8BGH4) Receptor expression-enhancing protein 1|
          Length = 201

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 655 LRRDGRPTPAGLPPPSAGLFSRLRRARMLSAEASDA 548
           +R DG P P+G PPP  G  S       +S  AS++
Sbjct: 159 IRGDGAPAPSGPPPPGTGRSSGKHSQPKMSRSASES 194

>REEP1_HUMAN (Q9H902) Receptor expression-enhancing protein 1|
          Length = 201

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 655 LRRDGRPTPAGLPPPSAGLFSRLRRARMLSAEASDA 548
           +R DG P P+G PPP +G  S       +S  AS++
Sbjct: 159 IRGDGAPAPSGPPPPGSGRASGKHGQPKMSRSASES 194

>PROB_SILPO (Q5LRY5) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 368

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = -2

Query: 581 GADALRGGLRCPRGDQARGDRHGLRDPRGAPPPQGSNLFTSQDCISARFRQSREVE 414
           G   L  G+    GD  RGD   +  P G    QG   +T  +  + R RQS ++E
Sbjct: 294 GKSLLPAGVASVTGDFGRGDPVAILGPDGRRLGQGLCRYTGDEARAIRGRQSSDIE 349

>VP21_TBSVB (P50631) Core protein P21 (P22)|
          Length = 189

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = +2

Query: 176 FLRLRWAFPLKVLCVRFGLQKRCVALPNHIFPSMFVSKCLC*LGTVKRKSSFTNISI 346
           FL  R  F + V   +FGL K C +LP   +  M++   L  L   K+K+S T+ S+
Sbjct: 134 FLEGRELFSISVKW-QFGLSKNCYSLPQSKWKVMYLEDALKVLKLSKKKASKTDSSV 189

>G109A_HUMAN (Q8TDS4) Nicotinic acid receptor 1 (G-protein coupled receptor|
           109A) (G-protein coupled receptor HM74A)
          Length = 363

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
 Frame = -2

Query: 194 PTEDGGSSLSCGFVCCL-----EIFKRCSFSLPLVLILLCSIPVV----QYELE-HVSIK 45
           P ++GG++L   F  C      E      F LPL +IL CS  ++    Q +++ H  IK
Sbjct: 168 PIQNGGANLCSSFSICHTFQWHEAMFLLEFFLPLGIILFCSARIIWSLRQRQMDRHAKIK 227

Query: 44  RVIS 33
           R I+
Sbjct: 228 RAIT 231

>NCOA3_RAT (Q9EPU2) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)|
           (Amplified in breast cancer-1 protein homolog) (AIB-1)
           (Fragment)
          Length = 1082

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
 Frame = -3

Query: 673 PLSGARLRRDGRPTPAGLPPP---SAGLFSRLRRARMLSAEASDALVEIKRGEIGMVSGI 503
           PL+ + L R G    A LP P   S+G    LR  R+  A  +  +++++ GE+ M  G+
Sbjct: 626 PLASSPLGRAGGDYSAALPRPALGSSGPTLPLRSNRLPGARPT-LMLQMRAGEVPMGMGV 684

Query: 502 PEEHLRRKVLIYSPARTASQQGSGKVG 422
                      YSPA  ++Q GS   G
Sbjct: 685 SP---------YSPAVPSNQPGSWPEG 702

>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -2

Query: 605 RALLSPTPGADALRG--GLRCPRGDQARGDRHGLRDPRGAPPPQGS 474
           RA +   PG+    G  G+R P GD  R    GL  PRG P   G+
Sbjct: 413 RAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGN 458

>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -2

Query: 584 PGADALRG--GLRCPRGDQARGDRHGLRDPRGAPPPQG 477
           PG D +RG  G   PRG        GL  PRG P P G
Sbjct: 625 PGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGPPG 662

>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)|
            (LC collagen)
          Length = 2944

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -2

Query: 587  TPGADALRG--GLRCPRGDQARGDRHGLRDPRGAPPPQG 477
            TPGA  L+G  GL  PRGD   G+R G R P+G P   G
Sbjct: 1318 TPGAPGLKGSPGLPGPRGDP--GER-GPRGPKGEPGAPG 1353

>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)|
          Length = 911

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -2

Query: 584 PGADALRG--GLRCPRGDQARGDRHGLRDPRGAPPPQG 477
           PG D +RG  G   PRG        GL  PRG P P G
Sbjct: 394 PGEDGIRGEDGEIGPRGLPGEAGPRGLLGPRGTPGPIG 431

>SPHS_SYNP7 (P39664) Sensor protein sphS (EC 2.7.13.3)|
          Length = 413

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = -1

Query: 267 NMWLGSATHLF*SPKRTQRTLSGKAHRRRRKQPKLWICMLSGDFQKM 127
           N W+    H   +P  + R L+     R + +P++W+  L G+ Q++
Sbjct: 171 NRWVSDVAHELKTPLTSIRLLAEALRDRLQDEPQVWVDRLLGETQRL 217


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,527,826
Number of Sequences: 219361
Number of extensions: 2345727
Number of successful extensions: 7887
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 6880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7842
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6882837918
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)