>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete
              sequence
          Length = 191358

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 82     ccacccaacacgcatcagtcagtaaa 107
              ||||||||||| ||||||||||||||
Sbjct: 167685 ccacccaacacacatcagtcagtaaa 167660

>gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16 genomic sequence, complete
             sequence
          Length = 129585

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 144   caacacttgcctgcctgcctgc 165
             ||||||||||||||||||||||
Sbjct: 77406 caacacttgcctgcctgcctgc 77427

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 144      caacacttgcctgcctgcctgc 165
                ||||||||||||||||||||||
Sbjct: 17983627 caacacttgcctgcctgcctgc 17983606

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 144      caacacttgcctgcctgcctgc 165
                ||||||||||||||||||||||
Sbjct: 17992880 caacacttgcctgcctgcctgc 17992859

>ref|NM_054048.1| Mus musculus REST corepressor 2 (Rcor2), mRNA
          Length = 2037

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 149  cttgcctgcctgcctgcagag 169
            |||||||||||||||||||||
Sbjct: 1703 cttgcctgcctgcctgcagag 1723

>gb|AC110253.10| Mus musculus chromosome 5, clone RP23-270N2, complete sequence
          Length = 224182

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 149    cttgcctgcctgcctgcagag 169
              |||||||||||||||||||||
Sbjct: 114094 cttgcctgcctgcctgcagag 114074

>gb|AC140307.3| Mus musculus BAC clone RP23-389D15 from chromosome 19, complete sequence
          Length = 187731

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 149    cttgcctgcctgcctgcagag 169
              |||||||||||||||||||||
Sbjct: 138337 cttgcctgcctgcctgcagag 138357

>gb|AC117198.3| Mus musculus BAC clone RP23-127K18 from 9, complete sequence
          Length = 193044

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 145   aacacttgcctgcctgcctgc 165
             |||||||||||||||||||||
Sbjct: 94538 aacacttgcctgcctgcctgc 94558

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 158     ctgcctgcagagccgcgccgc 178
               |||||||||||||||||||||
Sbjct: 4499114 ctgcctgcagagccgcgccgc 4499134

>gb|AC117602.9| Mus musculus chromosome 5, clone RP23-462C22, complete sequence
          Length = 205604

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 149  cttgcctgcctgcctgcagag 169
            |||||||||||||||||||||
Sbjct: 5489 cttgcctgcctgcctgcagag 5469

>emb|X83587.2|MMA13E12B Mus musculus mRNA for CoREST protein
          Length = 2037

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 149  cttgcctgcctgcctgcagag 169
            |||||||||||||||||||||
Sbjct: 1703 cttgcctgcctgcctgcagag 1723

>dbj|AK052295.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330022J01 product:RE1-silencing
            transcription factor (REST) co-repressor, full insert
            sequence
          Length = 2272

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 149  cttgcctgcctgcctgcagag 169
            |||||||||||||||||||||
Sbjct: 1955 cttgcctgcctgcctgcagag 1975

>gb|BC055719.1| Mus musculus REST corepressor 2, mRNA (cDNA clone MGC:66834
            IMAGE:6415591), complete cds
          Length = 2457

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 149  cttgcctgcctgcctgcagag 169
            |||||||||||||||||||||
Sbjct: 2122 cttgcctgcctgcctgcagag 2142

>dbj|AK205817.1| Mus musculus cDNA, clone:Y2G0102O03, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000066646, based on BLAT search
          Length = 404

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 149 cttgcctgcctgcctgcagag 169
           |||||||||||||||||||||
Sbjct: 58  cttgcctgcctgcctgcagag 78

>emb|CT025660.9| Mouse DNA sequence from clone RP24-79I19 on chromosome 9, complete
              sequence
          Length = 219226

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 145    aacacttgcctgcctgcctgc 165
              |||||||||||||||||||||
Sbjct: 171126 aacacttgcctgcctgcctgc 171106

>ref|XM_516513.1| PREDICTED: Pan troglodytes similar to semaphorin sem2 (LOC460428),
            mRNA
          Length = 3969

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 154  ctgcctgcctgcagagccgc 173
            ||||||||||||||||||||
Sbjct: 1506 ctgcctgcctgcagagccgc 1487

>emb|AL691518.9| Mouse DNA sequence from clone RP23-267K1 on chromosome 11 Contains a
             CpG island, complete sequence
          Length = 114102

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   acacttgcctgcctgcctgc 165
             ||||||||||||||||||||
Sbjct: 73324 acacttgcctgcctgcctgc 73305

>gb|AC157932.8| Mus musculus chromosome 5, clone RP24-188B2, complete sequence
          Length = 168685

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    agcagagatgagattattct 72
             ||||||||||||||||||||
Sbjct: 67521 agcagagatgagattattct 67540

>gb|AC022844.8| Homo sapiens chromosome 8, clone RP11-250P18, complete sequence
          Length = 171732

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   ccacacagccaacacttgcc 154
             ||||||||||||||||||||
Sbjct: 73124 ccacacagccaacacttgcc 73143

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 158     ctgcctgcagagccgcgccg 177
               ||||||||||||||||||||
Sbjct: 2016547 ctgcctgcagagccgcgccg 2016528

>gb|AC118599.24| Mus musculus chromosome 5, clone RP23-459G5, complete sequence
          Length = 194003

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     agcagagatgagattattct 72
              ||||||||||||||||||||
Sbjct: 192655 agcagagatgagattattct 192674


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,596,122
Number of Sequences: 3902068
Number of extensions: 1596122
Number of successful extensions: 150973
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150742
Number of HSP's gapped (non-prelim): 231
length of query: 204
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 182
effective length of database: 17,147,199,772
effective search space: 3120790358504
effective search space used: 3120790358504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)