ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdk15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GUAA_BACCR (Q81IS3) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 28 4.3

>GUAA_BACCR (Q81IS3) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 515

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = -1

Query: 351 GKKVVPQQMSIKCNTADYRKNNKHVASIVDASCCTSESSPSDVIWFQCKHMIRGLP 184
           G +++ QQ   K   A++R+  K V  + + S   +      V+W     ++ GLP
Sbjct: 89  GMQLMTQQFGGKVERANHREYGKAVLKVENESKLYANLPEEQVVWMSHGDLVTGLP 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,850,146
Number of Sequences: 219361
Number of extensions: 909358
Number of successful extensions: 1822
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1822
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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