Clone Name | rbasdi11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | B3A3_RABIT (O18917) Anion exchange protein 3 (Neuronal band 3-li... | 28 | 8.8 | 2 | LEPA_SILPO (Q5LUS0) GTP-binding protein lepA | 28 | 8.8 |
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>B3A3_RABIT (O18917) Anion exchange protein 3 (Neuronal band 3-like protein)| (Solute carrier family 4 member 3) (Anion exchanger 3 brain isoform) Length = 1233 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = -3 Query: 362 QPMPRRGKRHGRCPQRTTXS*STSAXPTRAHAPRCA--RSPRW 240 +P+P G R + PQR S S+ RA APR A RS W Sbjct: 187 KPLPSVGPRSDKSPQR-----SVSSSSPRARAPRVAGERSRPW 224
>LEPA_SILPO (Q5LUS0) GTP-binding protein lepA| Length = 599 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/73 (27%), Positives = 33/73 (45%) Frame = +1 Query: 16 YSRYRHLQTVVRILFFLEKKNVLYEY*SLHDSCMSHACLHACVRACVNLDHLDRTGKARP 195 Y Y + +VRI+ + KK + ++ MS+ LH H+DR G RP Sbjct: 203 YDSYLGVIVLVRIMDGVLKKGMRVKF-------MSNGTLH----------HVDRIGVFRP 245 Query: 196 RGRRLSSASPGDV 234 + + S PG++ Sbjct: 246 AMQMIDSLGPGEI 258 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,091,652 Number of Sequences: 219361 Number of extensions: 685080 Number of successful extensions: 1851 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1818 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1851 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)