ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasdl03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 Score = 1185 bits (598), Expect = 0.0 Identities = 664/674 (98%), Gaps = 9/674 (1%) Strand = Plus / Minus Query: 26 atcggttacacc-gagtacaagtacacatccaacaagcatgcattgctccacaattacat 84 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1005 atcggttacaccagagtacaagtacacatccaacaagcatgcattgctccacaattacat 946 Query: 85 accatcatccacgggaaaaataatctaattccaccagcgatcttcttccccgtggtagca 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 945 accatcatccacgggaaaaataatctaattccaccagcgatcttcttccccgtggtagca 886 Query: 145 cactcctcggatttgttgctaactcccaacgtgttccttacttgggggcgaaggcccgga 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 cactcctcggatttgttgctaactcccaacgtgttccttacttgggggcgaaggcccgga 826 Query: 205 agatggtggcatggccggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgc 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 825 agatggtggcatggccggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgc 766 Query: 265 cggtgtactcggcctggaaccacgcgcccatgacggcgagcatggccaggcggccgttct 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 cggtgtactcggcctggaaccacgcgcccatgacggcgagcatggccaggcggccgttct 706 Query: 325 tgatctccttggtgcgcagctccttgagcttctcgggcgagccggtgccgtagccgagcg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 tgatctccttggtgcgcagctccttgagcttctcgggcgagccggtgccgtagccgagcg 646 Query: 385 ggtcaaaccacagaccacccggggtaccccgacgtcggtgccggtgagcttgttgttggg 444 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 645 ggtcaaaccacagacca-ccggggta-cccgacgtcggtgccggtgagcttgttgttggg 588 Query: 445 gaagatggggttcggtgtttgacgcagcctggcttgatgatgtctgcccaccggcggccc 504 |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 gaagatgggg-tcggtg-ttgacgcagcctggcttgatgatgtctgcccaccggcggccc 530 Query: 505 tcggcccagccgatgaggatgagctccacgatgaagagggtggttggtgtcggttgaagt 564 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 529 tcggcccagccgatgaggatgagctccacgatgaagagggtgg-tggtgtcgg-tgaagt 472 Query: 565 actcctgctccccgggcggtgtaccacgacgggcgtgttgaggatgccgatcttggtcag 624 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 471 actcctgctcccc-ggcggtgtaccacgac-ggcgtgttgaggatgccgatcttggtcag 414 Query: 625 cagctctgggatgaagatgcccgccgcgcccagcatcgcccaccggcagtgcaccagctc 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 cagctctgggatgaagatgcccgccgcgcccagcatcgcccaccggcagtgcaccagctc 354 Query: 685 cgcttgcacgttcc 698 ||| |||||||||| Sbjct: 353 cgcctgcacgttcc 340
>emb|X79277.1|LTLHAB L.temulentum lhaB mRNA Length = 1026 Score = 795 bits (401), Expect = 0.0 Identities = 550/586 (93%), Gaps = 14/586 (2%) Strand = Plus / Minus Query: 118 ccagcgatcttcttccccgtgg----tagcacactcctcggatttgttgct-aactccca 172 |||||||||||||||||||||| |||||||||||||||||| ||||| |||||| | Sbjct: 872 ccagcgatcttcttccccgtggcagctagcacactcctcggattagttgcccaactcc-a 814 Query: 173 acgtgttccttacttgggggcgaaggcccggaagatggtggcatggccggggtcggcgag 232 ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct: 813 acgtgctccttacttgggggcgaaggccctgaagatggtggcgtggccggggtcggcgag 754 Query: 233 gtgagcgaagaggttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcc 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 gtgagcgaagaggttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcc 694 Query: 293 catgacggcgagcatggccaggcggccgttcttgatctccttggtgcgcagctccttgag 352 |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct: 693 catgacggcgagcatggcgaggcggccattcttgatctccttggtgcgcagctccttaag 634 Query: 353 cttctcgggcgagccggtgccgtagccgagcgggtcaaaccacagaccacccggggtacc 412 |||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||| | Sbjct: 633 cttctctggcgagccgttgccgtagccgagtgggtcaaaccacagacca-ccggggta-c 576 Query: 413 ccgacgtcggtgccggtgagcttgttgttggggaagatggggttcggtgtttgacgcagc 472 |||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||| Sbjct: 575 ccgacgtcggtgccggtgagcttgttgttggggaagatgggg-tcggtg-ttgacggagc 518 Query: 473 ctggcttgatgatgtctgcccaccggcggccctcggcccagccgatgaggatgagctcca 532 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 cgggcttgatgatgtctgcccaccggcggccctcggcccagccgatgaggatgagctcca 458 Query: 533 cgatgaagagggtggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacg 592 ||| |||||| |||| ||||||||| |||||||||||||||| || |||||||||||||| Sbjct: 457 cgacgaagagcgtgg-tggtgtcgg-tgaagtactcctgctcgcc-ggcggtgtaccacg 401 Query: 593 acgggcgtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcg 652 || ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 400 ac-ggcgtgttgaggatgccgatcttggtcaggagctccgggatgaagatccccgccgct 342 Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 341 ccaagcatcgcccaccggcagtgcaccagctccgcctgcacgttcc 296 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/57 (96%), Gaps = 2/57 (3%) Strand = Plus / Minus Query: 39 agtacaagtacacatccaacaagcat--gcattgctccacaattacataccatcatc 93 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 961 agtacaagtacacatccaacaagcatatgcattgctccacaattacataccatcatc 905
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1062 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 814 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 755 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 754 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 695 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 694 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 635 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 634 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 577 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 576 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 519 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 518 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 459 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 458 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 403 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 402 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 343 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 342 accggcagtgcaccagctccgcctgcacgttcc 310
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1059 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 815 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 756 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 755 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 696 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 695 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 636 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 635 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 578 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 577 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 520 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 519 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 460 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 459 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 404 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 403 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 344 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 343 accggcagtgcaccagctccgcctgcacgttcc 311
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1058 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 817 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 758 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 757 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 698 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 697 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 638 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 637 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 580 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 579 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 522 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 521 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 462 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 461 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 406 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 405 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 346 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 345 accggcagtgcaccagctccgcctgcacgttcc 313
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 820 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 761 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 760 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 701 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 700 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 641 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 640 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 583 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 582 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 525 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 524 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 465 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 464 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 409 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 408 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 349 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 348 accggcagtgcaccagctccgcctgcacgttcc 316
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1061 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 820 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 761 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 760 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 701 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 700 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 641 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 640 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 583 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 582 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 525 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 524 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 465 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 464 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 409 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 408 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 349 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 348 accggcagtgcaccagctccgcctgcacgttcc 316
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1065 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 821 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 762 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 761 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 702 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 701 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 642 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 641 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 584 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 583 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 526 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 525 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 466 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 465 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 410 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 409 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 350 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 349 accggcagtgcaccagctccgcctgcacgttcc 317
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1069 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 821 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 762 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 761 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 702 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 701 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 642 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 641 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 584 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 583 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 526 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 525 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 466 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 465 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 410 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 409 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 350 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 349 accggcagtgcaccagctccgcctgcacgttcc 317
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1068 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 824 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 765 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 764 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 705 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 704 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 645 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 644 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 587 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 586 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 529 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 528 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 469 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 468 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 413 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 412 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 353 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 352 accggcagtgcaccagctccgcctgcacgttcc 320
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full insert sequence Length = 1088 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 835 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 776 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 775 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 716 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 715 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 656 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 655 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 598 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 597 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 540 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 539 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 480 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 479 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 424 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 423 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 364 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 363 accggcagtgcaccagctccgcctgcacgttcc 331
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full insert sequence Length = 1069 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 821 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 762 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 761 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 702 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 701 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 642 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 641 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 584 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 583 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 526 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 525 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 466 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 465 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 410 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 409 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 350 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 349 accggcagtgcaccagctccgcctgcacgttcc 317
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full insert sequence Length = 1065 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 821 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 762 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 761 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 702 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 701 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 642 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 641 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 584 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 583 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 526 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 525 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 466 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 465 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 410 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 409 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 350 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 349 accggcagtgcaccagctccgcctgcacgttcc 317
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full insert sequence Length = 1080 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 851 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 792 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 791 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 732 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 731 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 672 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 671 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 614 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 613 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 556 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 555 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 496 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 495 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 440 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 439 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 380 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 379 accggcagtgcaccagctccgcctgcacgttcc 347
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full insert sequence Length = 1058 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 817 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 758 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 757 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 698 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 697 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 638 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 637 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 580 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 579 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 522 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 521 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 462 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 461 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 406 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 405 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 346 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 345 accggcagtgcaccagctccgcctgcacgttcc 313
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full insert sequence Length = 1061 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 820 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 761 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 760 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 701 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 700 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 641 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 640 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 583 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 582 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 525 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 524 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 465 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 464 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 409 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 408 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 349 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 348 accggcagtgcaccagctccgcctgcacgttcc 316
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full insert sequence Length = 1059 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 815 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 756 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 755 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 696 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 695 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 636 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 635 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 578 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 577 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 520 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 519 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 460 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 459 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 404 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 403 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 344 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 343 accggcagtgcaccagctccgcctgcacgttcc 311
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full insert sequence Length = 1068 Score = 676 bits (341), Expect = 0.0 Identities = 478/513 (93%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 824 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 765 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 764 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 705 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 704 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 645 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 644 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 587 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 586 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccaggcttgatgat 529 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 528 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 469 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 468 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 413 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 412 ggatgccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 353 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 352 accggcagtgcaccagctccgcctgcacgttcc 320
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full insert sequence Length = 1062 Score = 668 bits (337), Expect = 0.0 Identities = 477/513 (92%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 814 ttgggggtgaaggcctggaagatggtggcgtggccggggtcggcgagatgggcgaagagg 755 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 754 ttgtcgatggggccggtgccggtgtactctgcctggaaccaagctcccatgacggcgagc 695 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| || || |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 694 atggcgagccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 635 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 634 ccggtgccccagccgagcgggtcaaaccacagacca-ccagggta-cccgacgtcggtgc 577 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| Sbjct: 576 cggtgagcttgttgttggggaagatgggg-tcggtg-ttgacgcagccgggcttgatgat 519 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 518 gtcagcccaccggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 459 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||| | |||||| || |||||||||||||||| |||||||||| Sbjct: 458 gg-tggtgtcgg-tgaagtattgctgctcgcc-ggcggtgtaccacgac-ggcgtgttga 403 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||| ||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 402 ggaagccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatcgccc 343 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 342 accggcagtgcaccagctccgcctgcacgttcc 310
>gb|AY105356.1| Zea mays PCO075138 mRNA sequence Length = 1317 Score = 620 bits (313), Expect = e-174 Identities = 471/513 (91%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| ||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 967 ttgggggtgaaggcctggaagatggtggcgtggccagggtcggcgaggtgggcgaagagg 908 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 907 ttgtcgatggggccggtgccggtgtactcggcctggaaccaggcgcccatgacggcgagc 848 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| ||||| |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 847 atggcgaggcgtccgttcttgatctccttggtgcgcagctccttgatcttctccggcgag 788 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 |||| ||| ||||||||||||||||||| || ||| || ||||| |||||||||||||| Sbjct: 787 ccggagccccagccgagcgggtcaaaccagaggcca-ccagggta-cccgacgtcggtgc 730 Query: 426 cggtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgat 485 |||||||||||||| |||||||||||||| |||||| ||||||| || ||||||||||| Sbjct: 729 cggtgagcttgttgctggggaagatgggg-tcggtg-ttgacgcttccgggcttgatgat 672 Query: 486 gtctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggt 545 ||| ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 671 gtcagcccagcggcggccctcggcccagccgatgaggatgagctcgatgatgaagagggt 612 Query: 546 ggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtgttga 605 || ||||||||| ||||||||| |||||| || |||||||||||| || ||| ||||||| Sbjct: 611 gg-tggtgtcgg-tgaagtactgctgctcgcc-ggcggtgtacca-gaagggtgtgttga 556 Query: 606 ggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgccc 665 ||| ||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||| Sbjct: 555 ggacgccgatcttggtcagaaactccgggatgaagatgcccgccgcgccgagcatcgccc 496 Query: 666 accggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||| |||||||||| Sbjct: 495 accggcagtgcaccagctccgcctgcacgttcc 463
>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete cds Length = 1066 Score = 444 bits (224), Expect = e-121 Identities = 453/517 (87%), Gaps = 13/517 (2%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggccggggtcggcgaggtgagcgaagagg 245 ||||||| ||||||| |||| |||||||| ||||||||||| || | || ||||| | | Sbjct: 794 ttgggggtgaaggcctggaaaatggtggcgtggccggggtctgctacatgggcgaaaaag 735 Query: 246 ttgtcgatggggccggtgccggtgtactcggcctggaaccacgcgcccatgacggcgagc 305 ||||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||| Sbjct: 734 ttgtcgatggggccggtgccggtgtgctctgcctggaaccaagctcccatgacggcgagc 675 Query: 306 atggccaggcggccgttcttgatctccttggtgcgcagctccttgagcttctcgggcgag 365 ||||| | || |||||||||||||||||||||||||||||||||| |||||| || ||| Sbjct: 674 atggcgacccgcccgttcttgatctccttggtgcgcagctccttgatcttctccggggag 615 Query: 366 ccggtgccgtagccgagcgggtcaaaccacagaccacccggggtaccccgacgtcggtgc 425 ||||||| ||||||||||||| ||||||| ||||| || | |||| |||||||||| Sbjct: 614 acggtgccccagccgagcgggtctaaccacaaaccacaagg--ttcccc-acgtcggtgc 558 Query: 426 cggtgagcttgttgttggggaa-gatggggttcggtgtttgacgcagcctggcttgatga 484 | |||| ||||||||||||||| |||||||| ||||||| |||||| || || ||||||| Sbjct: 557 ccgtgaacttgttgttggggaaagatggggt-cggtgtt-gacgcaacccgggttgatga 500 Query: 485 tg---tctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaaga 541 || || |||||||||||||| |||||||||||||||||||||||||| | |||||||| Sbjct: 499 tgatgtcagcccaccggcggccttcggcccagccgatgaggatgagctcgatgatgaaga 440 Query: 542 gggtggttggtgtcggttgaagtactcctgctccccgggcggtgtaccacgacgggcgtg 601 ||||||| ||||||||| |||||| | || || |||| ||||||||||||||||| ||| Sbjct: 439 gggtggt-ggtgtcggt-gaagtattgatgttcgccgg-cggtgtaccacgacggg-gtg 384 Query: 602 ttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagcatc 661 |||||||| |||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 383 ttgaggatcccgatcttggtcaggaactccgggatgaagatgcccgccgcgcccagcatc 324 Query: 662 gcccaccggcagtgcaccagctccgcttgcacgttcc 698 ||||||||||||||||| || ||||| |||||||||| Sbjct: 323 gcccaccggcagtgcacaagatccgcctgcacgttcc 287
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 387 bits (195), Expect = e-104 Identities = 270/287 (94%), Gaps = 6/287 (2%) Strand = Plus / Minus Query: 412 cccgacgtcggtgccggtgagcttgttgttggggaagatggggttcggtgtttgacgcag 471 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 23304995 cccgacgtcggtgccggtgagcttgttgttggggaagatggggt-cggtgtt-gacgcag 23304938 Query: 472 cctggcttgatgatgtctgcccaccggcggccctcggcccagccgatgaggatgagctcc 531 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23304937 ccgggcttgatgatgtcagcccaccggcggccctcggcccagccgatgaggatgagctcg 23304878 Query: 532 acgatgaagagggtggttggtgtcggttgaagtactcctgctccccgggcggtgtaccac 591 | ||||||||||||||| ||||||||| |||||| | |||||| |||| ||||||||||| Sbjct: 23304877 atgatgaagagggtggt-ggtgtcggt-gaagtattgctgctcgccgg-cggtgtaccac 23304821 Query: 592 gacgggcgtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgc 651 ||||| ||||||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 23304820 gacgg-cgtgttgaggatgccgatcttggtcaggaactccgggatgaagatgcccgccgc 23304762 Query: 652 gcccagcatcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 23304761 gcccagcatcgcccaccggcagtgcaccagctccgcctgcacgttcc 23304715 Score = 297 bits (150), Expect = 3e-77 Identities = 189/202 (93%) Strand = Plus / Minus Query: 202 ggaagatggtggcatggccggggtcggcgaggtgagcgaagaggttgtcgatggggccgg 261 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 23305312 ggaagatggtggcgtggccggggtcggcgagatgggcgaagaggttgtcgatggggccgg 23305253 Query: 262 tgccggtgtactcggcctggaaccacgcgcccatgacggcgagcatggccaggcggccgt 321 ||||||||||||| ||||||||||| || |||||||||||||||||||| || || |||| Sbjct: 23305252 tgccggtgtactctgcctggaaccaagctcccatgacggcgagcatggcgagccgcccgt 23305193 Query: 322 tcttgatctccttggtgcgcagctccttgagcttctcgggcgagccggtgccgtagccga 381 |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||| Sbjct: 23305192 tcttgatctccttggtgcgcagctccttgatcttctccggcgagccggtgccccagccga 23305133 Query: 382 gcgggtcaaaccacagaccacc 403 |||||||||||||||||||||| Sbjct: 23305132 gcgggtcaaaccacagaccacc 23305111 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 22434737 catggcgaggcggccattcttgatctccttg 22434707 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 cgacgtcggtgccggtgagc 433 |||||||||||||||||||| Sbjct: 14145485 cgacgtcggtgccggtgagc 14145504
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 387 bits (195), Expect = e-104 Identities = 270/287 (94%), Gaps = 6/287 (2%) Strand = Plus / Minus Query: 412 cccgacgtcggtgccggtgagcttgttgttggggaagatggggttcggtgtttgacgcag 471 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 60253 cccgacgtcggtgccggtgagcttgttgttggggaagatggggt-cggtgtt-gacgcag 60196 Query: 472 cctggcttgatgatgtctgcccaccggcggccctcggcccagccgatgaggatgagctcc 531 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 60195 ccgggcttgatgatgtcagcccaccggcggccctcggcccagccgatgaggatgagctcg 60136 Query: 532 acgatgaagagggtggttggtgtcggttgaagtactcctgctccccgggcggtgtaccac 591 | ||||||||||||||| ||||||||| |||||| | |||||| |||| ||||||||||| Sbjct: 60135 atgatgaagagggtggt-ggtgtcggt-gaagtattgctgctcgccgg-cggtgtaccac 60079 Query: 592 gacgggcgtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgc 651 ||||| ||||||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 60078 gacgg-cgtgttgaggatgccgatcttggtcaggaactccgggatgaagatgcccgccgc 60020 Query: 652 gcccagcatcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 60019 gcccagcatcgcccaccggcagtgcaccagctccgcctgcacgttcc 59973 Score = 297 bits (150), Expect = 3e-77 Identities = 189/202 (93%) Strand = Plus / Minus Query: 202 ggaagatggtggcatggccggggtcggcgaggtgagcgaagaggttgtcgatggggccgg 261 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 60570 ggaagatggtggcgtggccggggtcggcgagatgggcgaagaggttgtcgatggggccgg 60511 Query: 262 tgccggtgtactcggcctggaaccacgcgcccatgacggcgagcatggccaggcggccgt 321 ||||||||||||| ||||||||||| || |||||||||||||||||||| || || |||| Sbjct: 60510 tgccggtgtactctgcctggaaccaagctcccatgacggcgagcatggcgagccgcccgt 60451 Query: 322 tcttgatctccttggtgcgcagctccttgagcttctcgggcgagccggtgccgtagccga 381 |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||| Sbjct: 60450 tcttgatctccttggtgcgcagctccttgatcttctccggcgagccggtgccccagccga 60391 Query: 382 gcgggtcaaaccacagaccacc 403 |||||||||||||||||||||| Sbjct: 60390 gcgggtcaaaccacagaccacc 60369
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full insert sequence Length = 1646 Score = 387 bits (195), Expect = e-104 Identities = 270/287 (94%), Gaps = 6/287 (2%) Strand = Plus / Minus Query: 412 cccgacgtcggtgccggtgagcttgttgttggggaagatggggttcggtgtttgacgcag 471 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 778 cccgacgtcggtgccggtgagcttgttgttggggaagatggggt-cggtgtt-gacgcag 721 Query: 472 cctggcttgatgatgtctgcccaccggcggccctcggcccagccgatgaggatgagctcc 531 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 ccgggcttgatgatgtcagcccaccggcggccctcggcccagccgatgaggatgagctcg 661 Query: 532 acgatgaagagggtggttggtgtcggttgaagtactcctgctccccgggcggtgtaccac 591 | ||||||||||||||| ||||||||| |||||| | |||||| |||| ||||||||||| Sbjct: 660 atgatgaagagggtggt-ggtgtcggt-gaagtattgctgctcgccgg-cggtgtaccac 604 Query: 592 gacgggcgtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgc 651 ||||| ||||||||||||||||||||||||||| | ||| |||||||||||||||||||| Sbjct: 603 gacgg-cgtgttgaggatgccgatcttggtcaggaactccgggatgaagatgcccgccgc 545 Query: 652 gcccagcatcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 544 gcccagcatcgcccaccggcagtgcaccagctccgcctgcacgttcc 498 Score = 297 bits (150), Expect = 3e-77 Identities = 189/202 (93%) Strand = Plus / Minus Query: 202 ggaagatggtggcatggccggggtcggcgaggtgagcgaagaggttgtcgatggggccgg 261 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1095 ggaagatggtggcgtggccggggtcggcgagatgggcgaagaggttgtcgatggggccgg 1036 Query: 262 tgccggtgtactcggcctggaaccacgcgcccatgacggcgagcatggccaggcggccgt 321 ||||||||||||| ||||||||||| || |||||||||||||||||||| || || |||| Sbjct: 1035 tgccggtgtactctgcctggaaccaagctcccatgacggcgagcatggcgagccgcccgt 976 Query: 322 tcttgatctccttggtgcgcagctccttgagcttctcgggcgagccggtgccgtagccga 381 |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||| Sbjct: 975 tcttgatctccttggtgcgcagctccttgatcttctccggcgagccggtgccccagccga 916 Query: 382 gcgggtcaaaccacagaccacc 403 |||||||||||||||||||||| Sbjct: 915 gcgggtcaaaccacagaccacc 894
>gb|AY105333.1| Zea mays PCO095488 mRNA sequence Length = 794 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 216 tggccggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtgtactcg 275 |||||||||||||||||||| |||| ||||||||||||||||| ||| |||||| || Sbjct: 433 tggccggggtcggcgaggtgcgcgagcaggttgtcgatggggccctggcccgtgtacacg 374 Query: 276 gcctggaaccacgcgcccatgacggcgagcatggccaggcggccgttcttgatctccttg 335 ||||||||||| ||| | || |||||||||||| || || |||||||||||||||||| Sbjct: 373 gcctggaaccagaagccgacgaaggcgagcatggcgagccgcccgttcttgatctccttg 314 Query: 336 gtgcgcagc 344 ||||||||| Sbjct: 313 gtgcgcagc 305
>emb|X58516.1|PSLHAB1 P.silvestris mRNA for type II chlorophyll a/b binding protein of LHC I Length = 904 Score = 101 bits (51), Expect = 3e-18 Identities = 244/303 (80%), Gaps = 4/303 (1%) Strand = Plus / Minus Query: 210 gtggcatggccggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtg 269 |||||||| || ||||| || |||||||| || | |||||| ||||| || ||||| ||| Sbjct: 855 gtggcatgtccagggtctgcaaggtgagccaataagttgtcaatgggaccagtgccagtg 796 Query: 270 tactcggcctggaaccacgcgcccatgacggcgagcatggccaggcggccgttcttgatc 329 ||||| || |||||||| || |||||||| || | |||||||| || || |||||||| Sbjct: 795 tactctgcttggaaccaagctcccatgacagccaacatggccaatcgtccattcttgatt 736 Query: 330 tccttggtgcgcagctccttgagcttctcgggcgagccggtgccgtagccgagcgggtca 389 |||||||| | ||||||||||| ||||| || ||||| | ||| |||| || |||||| Sbjct: 735 tccttggtcctcagctccttgattttctcaggagagccagagccccagccaagagggtca 676 Query: 390 aaccacagaccacccggggtaccccgacgtcggtgccggtgagcttgttgttggggaaga 449 ||||||| ||| || ||||| ||| || || || || || ||||||||||||||||||| Sbjct: 675 aaccaca-acccaccagggta-cccaacatcagttccagtcagcttgttgttggggaaga 618 Query: 450 tggggttcggtgtttgacgcagcctggcttgatgatgtctgcccaccggcggccctcggc 509 | || |||||| ||||| |||| |||| | ||| |||||||| | |||||||||||| Sbjct: 617 t-tggatcggtg-ttgactgagccgggctctaagatatctgcccatctgcggccctcggc 560 Query: 510 cca 512 ||| Sbjct: 559 cca 557
>emb|AJ271124.1|PAB271124 Picea abies mRNA for putative chlorophyll A-B binding protein, (pPA0001 gene) Length = 1004 Score = 93.7 bits (47), Expect = 7e-16 Identities = 234/291 (80%), Gaps = 4/291 (1%) Strand = Plus / Minus Query: 222 gggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtgtactcggcctgg 281 ||||| || |||||||| || | |||||| ||||| || ||||| |||||||| || ||| Sbjct: 835 gggtctgcaaggtgagccaacaagttgtcaatgggaccagtgccagtgtactctgcttgg 776 Query: 282 aaccacgcgcccatgacggcgagcatggccaggcggccgttcttgatctccttggtgcgc 341 ||||| || |||||||| || | |||||||| || || |||||||| |||||||| | | Sbjct: 775 aaccaagctcccatgacagccaacatggccaatcgtccattcttgatttccttggtcctc 716 Query: 342 agctccttgagcttctcgggcgagccggtgccgtagccgagcgggtcaaaccacagacca 401 | |||||||| ||||| || ||||| | ||| |||| || |||||||||||||| ||| Sbjct: 715 aactccttgattttctcaggagagccagagccccagccaagagggtcaaaccacagccca 656 Query: 402 cccggggtaccccgacgtcggtgccggtgagcttgttgttggggaagatggggttcggtg 461 || ||| ||||| || || || || || |||||||||||||||||||| || |||||| Sbjct: 655 ccaggg-taccca-acatcagttccagtcagcttgttgttggggaagat-tggatcggtg 599 Query: 462 tttgacgcagcctggcttgatgatgtctgcccaccggcggccctcggccca 512 ||||| |||| || || || || |||||||| | ||||||||||||||| Sbjct: 598 -ttgaccgagccgggtttaattatatctgcccatctgcggccctcggccca 549 Score = 65.9 bits (33), Expect = 2e-07 Identities = 88/105 (83%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 580 gcggtgtaccacgacgggcgtgttgaggatgccgatcttggtcagcagctctgggatgaa 639 ||||||||||| || ||| ||||||||||| || | ||| |||| ||||||||| ||||| Sbjct: 484 gcggtgtaccaggagggg-gtgttgaggatccccaacttagtcaacagctctggaatgaa 426 Query: 640 gatgcccgccgcgcccagcatcgcccaccggcagtgcaccagctc 684 ||| || || ||||||||||| ||||| | ||| || |||||||| Sbjct: 425 gattccagctgcgcccagcattgcccatctgcaatgaaccagctc 381
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 89.7 bits (45), Expect = 1e-14 Identities = 108/129 (83%) Strand = Plus / Minus Query: 216 tggccggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtgtactcg 275 ||||||||||||||||||||| | |||||| || |||||||| ||||||||| || Sbjct: 16234704 tggccggggtcggcgaggtgatgcaggaggttatcaatggggccctcgccggtgtagacg 16234645 Query: 276 gcctggaaccacgcgcccatgacggcgagcatggccaggcggccgttcttgatctccttg 335 ||||||||||| |||| || |||||||||||| || | |||||||||||||||||| Sbjct: 16234644 gcctggaaccagaaccccacgaaggcgagcatggcgagcctcccgttcttgatctccttg 16234585 Query: 336 gtgcgcagc 344 ||||||||| Sbjct: 16234584 gtgcgcagc 16234576 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 654 ccagcatcgcccaccggcagtgcaccagctccgc 687 |||||||||||||||||| ||||| ||||||||| Sbjct: 16234274 ccagcatcgcccaccggctgtgcatcagctccgc 16234241 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 10793647 catggcgaggcggccgttcttgatctcctt 10793618 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||||||||||||| |||| Sbjct: 10793311 cgcgcccagcatcgcccaccgggagtg 10793285 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 309 gccaggcggccgttcttgatctcctt 334 |||||||| ||||||||||||||||| Sbjct: 7133596 gccaggcgaccgttcttgatctcctt 7133571
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 89.7 bits (45), Expect = 1e-14 Identities = 108/129 (83%) Strand = Plus / Minus Query: 216 tggccggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtgtactcg 275 ||||||||||||||||||||| | |||||| || |||||||| ||||||||| || Sbjct: 51220 tggccggggtcggcgaggtgatgcaggaggttatcaatggggccctcgccggtgtagacg 51161 Query: 276 gcctggaaccacgcgcccatgacggcgagcatggccaggcggccgttcttgatctccttg 335 ||||||||||| |||| || |||||||||||| || | |||||||||||||||||| Sbjct: 51160 gcctggaaccagaaccccacgaaggcgagcatggcgagcctcccgttcttgatctccttg 51101 Query: 336 gtgcgcagc 344 ||||||||| Sbjct: 51100 gtgcgcagc 51092 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 654 ccagcatcgcccaccggcagtgcaccagctccgc 687 |||||||||||||||||| ||||| ||||||||| Sbjct: 50790 ccagcatcgcccaccggctgtgcatcagctccgc 50757
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 89.7 bits (45), Expect = 1e-14 Identities = 108/129 (83%) Strand = Plus / Minus Query: 216 tggccggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtgtactcg 275 ||||||||||||||||||||| | |||||| || |||||||| ||||||||| || Sbjct: 139305 tggccggggtcggcgaggtgatgcaggaggttatcaatggggccctcgccggtgtagacg 139246 Query: 276 gcctggaaccacgcgcccatgacggcgagcatggccaggcggccgttcttgatctccttg 335 ||||||||||| |||| || |||||||||||| || | |||||||||||||||||| Sbjct: 139245 gcctggaaccagaaccccacgaaggcgagcatggcgagcctcccgttcttgatctccttg 139186 Query: 336 gtgcgcagc 344 ||||||||| Sbjct: 139185 gtgcgcagc 139177 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 654 ccagcatcgcccaccggcagtgcaccagctccgc 687 |||||||||||||||||| ||||| ||||||||| Sbjct: 138875 ccagcatcgcccaccggctgtgcatcagctccgc 138842
>dbj|AK067780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F21, full insert sequence Length = 919 Score = 89.7 bits (45), Expect = 1e-14 Identities = 108/129 (83%) Strand = Plus / Minus Query: 216 tggccggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtgtactcg 275 ||||||||||||||||||||| | |||||| || |||||||| ||||||||| || Sbjct: 827 tggccggggtcggcgaggtgatgcaggaggttatcaatggggccctcgccggtgtagacg 768 Query: 276 gcctggaaccacgcgcccatgacggcgagcatggccaggcggccgttcttgatctccttg 335 ||||||||||| |||| || |||||||||||| || | |||||||||||||||||| Sbjct: 767 gcctggaaccagaaccccacgaaggcgagcatggcgagcctcccgttcttgatctccttg 708 Query: 336 gtgcgcagc 344 ||||||||| Sbjct: 707 gtgcgcagc 699 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 654 ccagcatcgcccaccggcagtgcaccagctccgc 687 |||||||||||||||||| ||||| ||||||||| Sbjct: 397 ccagcatcgcccaccggctgtgcatcagctccgc 364
>emb|AJ538473.1|NTA538473 Nicotiana tabacum cDNA-AFLP-fragment BC2-M21-025 Length = 102 Score = 73.8 bits (37), Expect = 7e-10 Identities = 75/85 (88%), Gaps = 2/85 (2%) Strand = Plus / Plus Query: 412 cccgacgtcggtgccggtgagcttgttgttggggaagatggggttcggtgtttgacgcag 471 |||||| || ||||| |||||||||||||| |||||||||||| || |||||| ||||| Sbjct: 13 cccgacatctgtgcccgtgagcttgttgttagggaagatgggg-tctgtgttt-acgcac 70 Query: 472 cctggcttgatgatgtctgcccacc 496 || ||||||||||| |||||||||| Sbjct: 71 ccaggcttgatgatatctgcccacc 95
>dbj|AB122116.1| Chlamydomonas reinhardtii LhcI-3 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1830 Score = 73.8 bits (37), Expect = 7e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttggtgcgcagctcctt 349 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1271 catggccaggcggccgttcttgatctccttggtctgcagctcctt 1227
>gb|U22329.1|VCU22329 Volvox carteri light harvesting complex a mRNA, complete cds Length = 1085 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 303 agcatggccaggcggccgttcttgatctccttggt 337 ||||||||||||||||||||||||||||||||||| Sbjct: 694 agcatggccaggcggccgttcttgatctccttggt 660
>gb|M21317.1|PETLCHI Petunia chlorophyll binding protein mRNA, complete cds Length = 1013 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/94 (87%), Gaps = 3/94 (3%) Strand = Plus / Minus Query: 403 ccggggtaccccgacgtcggtgccggtgagcttgttgttggggaagatggggttcggtgt 462 ||||||||||| |||||| || || ||||||||||||||||||||||| ||| || |||| Sbjct: 600 ccggggtaccc-gacgtctgttcctgtgagcttgttgttggggaagat-gggatctgtgt 543 Query: 463 ttgacgcagcctggcttgatgatgtctgcccacc 496 || || || || ||||||||||| |||||||||| Sbjct: 542 tt-acacatccaggcttgatgatatctgcccacc 510
>gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding protein precursor (Lhca4) mRNA, partial cds; nuclear gene for chloroplast product Length = 687 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 616 cttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgcccaccggcagtg 675 ||||||||||| ||| ||||| | || |||||| | ||||||||||||||||| | || Sbjct: 279 cttggtcagcacctccgggatcagcatccccgccacccccagcatcgcccaccgcccgtt 220 Query: 676 caccagctccgcttgcacg 694 |||||||||||| |||||| Sbjct: 219 caccagctccgcctgcacg 201
>dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, complete cds Length = 952 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 ||||||||||||||||||||||||||||||| Sbjct: 775 catggccaggcggccgttcttgatctccttg 745
>emb|X81962.1|PSLHAB P.sativum mRNA for type II chlorophyll a/b binding protein Length = 1014 Score = 61.9 bits (31), Expect = 3e-06 Identities = 102/123 (82%), Gaps = 2/123 (1%) Strand = Plus / Minus Query: 428 gtgagcttgttgttggggaagatggggttcggtgtttgacgcagcctggcttgatgatgt 487 |||||||||||||| ||||| || |||| ||||||| |||||||||||| |||| ||||| Sbjct: 595 gtgagcttgttgtttgggaaaatagggt-cggtgtt-gacgcagcctggattgaggatgt 538 Query: 488 ctgcccaccggcggccctcggcccagccgatgaggatgagctccacgatgaagagggtgg 547 | ||||| | | ||||||||||| ||||||| | ||| || || |||||||| |||| Sbjct: 537 cagcccatcttcttccctcggcccaaccgatgaaaacgagttcgactatgaagagcgtgg 478 Query: 548 ttg 550 ||| Sbjct: 477 ttg 475 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 231 aggtgagcgaagaggttgtcgatggggccggtgccggtgta 271 ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 790 aggtgggcgaagaggttatcgataggaccggtgccggtgta 750
>gb|M60049.1|DUNCAB D.tertiolecta 28.5-kDa LHCII apoprotein mRNA, complete cds Length = 1041 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 ||||||||||||||||||||||||||||||| Sbjct: 672 catggccaggcggccgttcttgatctccttg 642
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 659 catggccaggcggccgttcttgatctcctt 630
>gb|AF104631.3| Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb3) mRNA, complete cds Length = 1314 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 711 catggccaggcggccgttcttgatctcctt 682
>gb|AF104633.2| Chlamydomonas reinhardtii light harvesting complex I protein precursor (Lhca1) mRNA, complete cds Length = 1129 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 601 catggccaggcggccgttcttgatctcctt 572
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 1367 catggccaggcggccgttcttgatctcctt 1338
>gb|AF479779.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m7 (Lhcbm7) mRNA, complete cds Length = 1016 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 656 catggccaggcggccgttcttgatctcctt 627
>gb|AF479778.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m9 (Lhcbm9) mRNA, complete cds Length = 1221 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 658 catggccaggcggccgttcttgatctcctt 629
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 657 catggccaggcggccgttcttgatctcctt 628
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 651 catggccaggcggccgttcttgatctcctt 622
>gb|AF244524.1| Chlamydomonas reinhardtii chlorophyll a/b-binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1413 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttggtg 338 ||||||||||||||||||||||| |||||||||| Sbjct: 526 catggccaggcggccgttcttgacctccttggtg 493
>dbj|AB122119.1| Chlamydomonas reinhardtii LhcI-6 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1664 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 1348 catggccaggcggccgttcttgatctcctt 1319
>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1886 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 1442 catggccaggcggccgttcttgatctcctt 1413
>emb|X71965.1|CSCAB2MR C.stellata cab2 mRNA for light harvesting complex I chlorophyll binding protein Length = 1141 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 640 gatgcccgccgcgcccagcatcgcccaccggcagtgcaccagctccgcttgcac 693 |||||| || ||||||||||| ||||| ||||||||||||||||| || ||||| Sbjct: 303 gatgccagcggcgcccagcatggcccagcggcagtgcaccagctcagcctgcac 250
>emb|X65119.1|CRCABI1MR C.reinhardtii cabI-1 mRNA for light harvesting complex protein I-20 (LHCPI-20) Length = 1073 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 550 catggccaggcggccgttcttgatctcctt 521
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 643 catggccaggcggccgttcttgatctcctt 614
>dbj|AB051208.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1107 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 685 catggccaggcggccgttcttgatctcctt 656
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 1280 catggccaggcggccgttcttgatctcctt 1251
>dbj|AB051204.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1835 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||||||| Sbjct: 1527 catggccaggcggccgttcttgatctcctt 1498
>gb|AY954735.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca3 gene, complete cds; nuclear gene for chloroplast product Length = 1113 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttggt 337 |||||| |||||||||||||||||||||||||| Sbjct: 972 catggcgaggcggccgttcttgatctccttggt 940
>gb|AC158192.2| Selaginella moellendorffii clone JGIASXY-5N4, complete sequence Length = 37184 Score = 58.0 bits (29), Expect = 4e-05 Identities = 142/177 (80%), Gaps = 2/177 (1%) Strand = Plus / Minus Query: 279 tggaaccacgcgcccatgacggcgagcatggccaggcggccgttcttgatctccttggtg 338 |||||||| || ||||||||||| ||||| || || | || ||||||||||||||||| Sbjct: 36573 tggaaccaggcacccatgacggcaagcattgcaagtcttccattcttgatctccttggtc 36514 Query: 339 cgcagctccttgagcttctcgggcgagccggtgccgtagccgagcgggtcaaaccacaga 398 | || ||||||||||| || ||||| | || || |||||| || || ||||| | Sbjct: 36513 ctgagttccttgagcttttcaggcgaagcagttccccagccgaatggatcgaaccagaat 36454 Query: 399 ccacccggggtaccccgacgtcggtgccggtgagcttgttgttggggaagatggggt 455 ||| |||||||| ||| ||||| || || |||||||||||||||||||||| ||||| Sbjct: 36453 cca-ccggggtatccc-acgtctgttcctgtgagcttgttgttggggaagacggggt 36399
>dbj|AB122117.1| Chlamydomonas reinhardtii LhcI-4 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1970 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 290 gcccatgacggcgagcatggccaggcggccgttcttgatctcctt 334 ||||| || ||| ||||||||||||||||||||||||| |||||| Sbjct: 1698 gcccaggaaggccagcatggccaggcggccgttcttgacctcctt 1654
>gb|AY106149.1| Zea mays PCO102434 mRNA sequence Length = 1081 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 303 agcatggccaggcggccgttcttgatctccttg 335 |||||||| |||||||||||||||||||||||| Sbjct: 666 agcatggcgaggcggccgttcttgatctccttg 634
>ref|NM_116012.2| Arabidopsis thaliana LHCA2; chlorophyll binding AT3G61470 (LHCA2) mRNA, complete cds Length = 1099 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 441 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 382 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 381 atagcccatcggcagtggactatctcggcttgtacgttcc 342 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 714 ccgttcttgatctccttggtcctcaactccttgagctt 677
>emb|AL132962.1|ATF2A19 Arabidopsis thaliana DNA chromosome 3, BAC clone F2A19 Length = 95993 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 40669 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 40610 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 40609 atagcccatcggcagtggactatctcggcttgtacgttcc 40570 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 40942 ccgttcttgatctccttggtcctcaactccttgagctt 40905
>gb|AY065429.1| Arabidopsis thaliana putative Lhca2 protein (At3g61470) mRNA, complete cds Length = 1035 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 432 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 373 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 372 atagcccatcggcagtggactatctcggcttgtacgttcc 333 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 705 ccgttcttgatctccttggtcctcaactccttgagctt 668
>gb|AY072483.1| Arabidopsis thaliana Lhca2 protein (At3g61470; F2A19.70) mRNA, complete cds Length = 900 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 365 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 306 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 305 atagcccatcggcagtggactatctcggcttgtacgttcc 266 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 638 ccgttcttgatctccttggtcctcaactccttgagctt 601
>gb|AY054670.1| Arabidopsis thaliana Lhca2 protein (At3g61470; F2A19.70) mRNA, complete cds Length = 945 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 405 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 346 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 345 atagcccatcggcagtggactatctcggcttgtacgttcc 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 678 ccgttcttgatctccttggtcctcaactccttgagctt 641
>gb|AF268322.1|AF268322 Guillardia theta light-harvesting complex protein LHCC4 mRNA, partial cds Length = 715 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 296 gacggcgagcatggccaggcggccgttcttgatctc 331 |||||||||||| || |||||||||||||||||||| Sbjct: 610 gacggcgagcatagcaaggcggccgttcttgatctc 575
>emb|BX822099.1|CNS0A7GL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZA09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 390 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 331 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 330 atagcccatcggcagtggactatctcggcttgtacgttcc 291 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 663 ccgttcttgatctccttggtcctcaactccttgagctt 626
>emb|BX823150.1|CNS0A635 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB93ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 393 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 334 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 333 atagcccatcggcagtggactatctcggcttgtacgttcc 294 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 666 ccgttcttgatctccttggtcctcaactccttgagctt 629
>emb|BX822082.1|CNS0A5ZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 393 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 334 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 333 atagcccatcggcagtggactatctcggcttgtacgttcc 294 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 666 ccgttcttgatctccttggtcctcaactccttgagctt 629
>emb|BX823776.1|CNS0A5AG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS74ZE06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 973 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 391 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 332 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 331 atagcccatcggcagtggactatctcggcttgtacgttcc 292 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 664 ccgttcttgatctccttggtcctcaactccttgagctt 627
>emb|BX823614.1|CNS0A5E1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS57ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 908 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 395 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 336 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 335 atagcccatcggcagtggactatctcggcttgtacgttcc 296 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 668 ccgttcttgatctccttggtcctcaactccttgagctt 631
>emb|BX823486.1|CNS0A5AK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS43ZB01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 620 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 109 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 50 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 49 atagcccatcggcagtggactatctcggcttgtacgttcc 10 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 ||||||||| |||||||||| | || |||||||||||| Sbjct: 382 ccgttcttgctctccttggtcctcaactccttgagctt 345
>emb|BX842122.1|CNS09YDD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 977 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 394 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 335 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 334 atagcccatcggcagtggactatctcggcttgtacgttcc 295 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 667 ccgttcttgatctccttggtcctcaactccttgagctt 630
>gb|AY088983.1| Arabidopsis thaliana clone 123159 mRNA, complete sequence Length = 1021 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 440 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 381 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 380 atagcccatcggcagtggactatctcggcttgtacgttcc 341 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgag 352 |||||||||||||||||||| | || ||||||||| Sbjct: 713 ccgttcttgatctccttggtcctcaactccttgag 679
>gb|AF134120.1| Arabidopsis thaliana Lhca2 protein (Lhca2) mRNA, complete cds Length = 960 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 403 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 344 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 343 atagcccatcggcagtggactatctcggcttgtacgttcc 304 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgag 352 |||||||||||||||||||| | || ||||||||| Sbjct: 676 ccgttcttgatctccttggtcctcaactccttgag 642
>dbj|AB122114.1| Chlamydomonas reinhardtii LhcI-1 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 2649 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 303 agcatggccaggcggccgttcttgatctcctt 334 ||||||||||| |||||||||||||||||||| Sbjct: 2320 agcatggccagacggccgttcttgatctcctt 2289
>gb|BT002070.1| Arabidopsis thaliana Lhca2 protein (At3g61470) mRNA, complete cds Length = 991 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 405 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 346 Query: 659 atcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 || ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 345 atagcccatcggcagtggactatctcggcttgtacgttcc 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 678 ccgttcttgatctccttggtcctcaactccttgagctt 641
>gb|M23531.1|DUNCBP D.salina major chlorophyll binding protein mRNA, complete cds Length = 1240 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 300 gcgagcatggccaggcggccgttcttgatctccttg 335 |||| ||| ||||||||||||||||||||||||||| Sbjct: 865 gcgaacatagccaggcggccgttcttgatctccttg 830
>gb|DQ122899.1| Chlamydomonas incerta chloroplast light harvesting complex I protein (LhcA) mRNA, complete cds; nuclear gene for chloroplast product Length = 746 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 300 gcgagcatggccaggcggccgttcttgatctcctt 334 |||| ||||||||||||||||||||||| |||||| Sbjct: 605 gcgatcatggccaggcggccgttcttgacctcctt 571 Score = 40.1 bits (20), Expect = 9.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 640 gatgcccgccgcgcccagcatcgcccaccggcagtgcaccagctccgcttgcacgt 695 |||||| || ||||||||||| || | |||| |||||||||||| || ||||||| Sbjct: 264 gatgccagcagcgcccagcatggcgaagcggccgtgcaccagctcagcctgcacgt 209
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||||||||| |||||||||||||||||| Sbjct: 840 catggccaggcgtccgttcttgatctccttg 810
>ref|XM_482573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 425 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 466
>ref|XM_482572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1070 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 358 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 317
>ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1138 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 362 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 321
>ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1138 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 362 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 321
>ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1178 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 359 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 318
>ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1188 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 358 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 317
>ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1191 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 361 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 320
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 663 catggcgaggcggccgttcttgatctcctt 634 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||| |||||||||||||| Sbjct: 327 cgcgcccagcatggcccaccggcagtg 301
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 651 catggcgaggcggccgttcttgatctcctt 622
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 220 cggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtg 269 |||||||||||| ||| |||||||||| ||||||||||| |||||||| Sbjct: 79022 cggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggtg 79071 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||||||||||| |||||| Sbjct: 79107 catggcgaggcggccgttcttgagctcctt 79136
>gb|AY171231.1| Chlamydomonas reinhardtii light-harvesting complex I protein (Lhca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1274 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||||||||||||||||| |||||| Sbjct: 601 catggccaggcggccgttcttgacctcctt 572
>gb|BT012040.1| Arabidopsis thaliana At5g28450 mRNA sequence Length = 306 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 170 ccgttcttgatctccttggtcctcaactccttgagctt 133
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 220 cggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtg 269 |||||||||||| ||| |||||||||| ||||||||||| |||||||| Sbjct: 21808794 cggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggtg 21808745 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||||||||||| |||||| Sbjct: 21808709 catggcgaggcggccgttcttgagctcctt 21808680
>emb|X54090.1|GHCAB G.hirsutum cab gene for chlorophyll ab binding protein Length = 1746 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 309 gccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||| Sbjct: 1202 gccaggcggccgttcttgatctcctt 1177
>gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyll a/b binding protein presusor mRNA, complete cds; nuclear gene for chloroplast product Length = 1128 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 338 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 297
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 729 catggcgaggcggccgttcttgatctcctt 700 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||| |||||||||||||| Sbjct: 393 cgcgcccagcatggcccaccggcagtg 367
>gb|AF495472.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m6 mRNA, complete cds; nuclear gene for chloroplast product Length = 1094 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 309 gccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||| Sbjct: 662 gccaggcggccgttcttgatctcctt 637
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 14011 catggcgaggcggccgttcttgatctcctt 14040 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||| |||||||||||||| Sbjct: 14347 cgcgcccagcatggcccaccggcagtg 14373
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 21164960 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 21165001
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 220 cggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtg 269 |||||||||||| ||| |||||||||| ||||||||||| |||||||| Sbjct: 21801823 cggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggtg 21801774 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||||||||||| |||||| Sbjct: 21801738 catggcgaggcggccgttcttgagctcctt 21801709
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 30025000 catggcgaggcggccgttcttgatctcctt 30024971 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 23604194 catggcgaggcggccgttcttgatctcctt 23604165 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||| |||||||||||||| Sbjct: 30024664 cgcgcccagcatggcccaccggcagtg 30024638
>emb|BX822402.1|CNS0A5WB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB34ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 902 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 681 ccgttcttgatctccttggtcctcaactccttgagctt 644 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaa 639 ||||||||||| |||||||| || || | |||||||||||| Sbjct: 408 gtgttgaggattccgatcttcgttaggaactctgggatgaa 368
>emb|BX822984.1|CNS0A4P7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZA01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 610 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||||||||||||| | || |||||||||||| Sbjct: 341 ccgttcttgatctccttggtcctcaactccttgagctt 304 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaa 639 ||||||||||| |||||||| || || | |||||||||||| Sbjct: 68 gtgttgaggattccgatcttcgttaggaactctgggatgaa 28
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 309 gccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||| Sbjct: 635 gccaggcggccgttcttgatctcctt 610
>gb|AF110786.1|AF110786 Volvox carteri f. nagariensis clone G18 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1047 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| |||||||||||||||||||| Sbjct: 652 catggccagacggccgttcttgatctcctt 623
>gb|AF195794.1|AF195794 Chlamydomonas reinhardtii chlorophyll A-B binding protein of LHCI (CAB6A) mRNA, complete cds Length = 1136 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||| ||||||||||||||||| Sbjct: 596 catggccaggcgcccgttcttgatctcctt 567
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 20990 catggcgaggcggccgttcttgatctcctt 20961 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||| |||||||||||||| Sbjct: 20654 cgcgcccagcatggcccaccggcagtg 20628
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 17370 catggcgaggcggccgttcttgatctcctt 17341 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||||||||||||| |||| Sbjct: 17034 cgcgcccagcatcgcccaccgggagtg 17008
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 66893 catggcgaggcggccgttcttgatctcctt 66864
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 130265 catggcgaggcggccgttcttgatctcctt 130236 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||||||||||||| |||| Sbjct: 129929 cgcgcccagcatcgcccaccgggagtg 129903
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 2586 catggcgaggcggccgttcttgatctcctt 2557
>dbj|AB122120.1| Chlamydomonas reinhardtii LhcI-7 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 2261 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||||||||||||||||| |||||| Sbjct: 1623 catggccaggcggccgttcttgacctcctt 1594
>dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-harvesting chlorophyll-a/b protein of photosystem I (Type III), complete cds Length = 2389 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 310 ccaggcggccgttcttgatctccttg 335 |||||||||||||||||||||||||| Sbjct: 1944 ccaggcggccgttcttgatctccttg 1919
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 136170 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 136211
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 722 catggcgaggcggccgttcttgatctcctt 693
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 721 catggcgaggcggccgttcttgatctcctt 692
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 220 cggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtg 269 |||||||||||| ||| |||||||||| ||||||||||| |||||||| Sbjct: 778 cggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggtg 729 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||||||||||||| |||| Sbjct: 357 cgcgcccagcatcgcccaccgggagtg 331 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||||||||||| |||||| Sbjct: 693 catggcaaggcggccgttcttgagctcctt 664
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 1151 catggcgaggcggccgttcttgatctcctt 1122
>emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein Length = 1011 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 668 catggcaaggcggccgttcttgatctcctt 639
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 684 catggcaaggcggccgttcttgatctcctt 655
>dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E04, full insert sequence Length = 1140 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 362 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 321
>dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G03, full insert sequence Length = 1177 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 359 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 318
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 715 catggcgaggcggccgttcttgatctcctt 686 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||||||||||||| |||| Sbjct: 379 cgcgcccagcatcgcccaccgggagtg 353
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 720 catggcgaggcggccgttcttgatctcctt 691 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||||||||||||| |||| Sbjct: 384 cgcgcccagcatcgcccaccgggagtg 358
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 722 catggcgaggcggccgttcttgatctcctt 693 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||||||||||||| |||| Sbjct: 386 cgcgcccagcatcgcccaccgggagtg 360
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 744 catggcgaggcggccgttcttgatctcctt 715 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||| |||||||||||||| Sbjct: 408 cgcgcccagcatggcccaccggcagtg 382
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 744 catggcgaggcggccgttcttgatctcctt 715 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||| |||||||||||||| Sbjct: 408 cgcgcccagcatggcccaccggcagtg 382
>dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B07, full insert sequence Length = 1193 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 363 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 322
>dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120A20, full insert sequence Length = 1138 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 362 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 321
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 220 cggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtg 269 |||||||||||| ||| |||||||||| ||||||||||| |||||||| Sbjct: 793 cggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggtg 744 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||||||||||| |||||| Sbjct: 708 catggcgaggcggccgttcttgagctcctt 679
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 746 catggcgaggcggccgttcttgatctcctt 717 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||| |||||||||||||| Sbjct: 410 cgcgcccagcatggcccaccggcagtg 384
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 251 catggcgaggcggccgttcttgatctcctt 222
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 220 cggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtg 269 |||||||||||| ||| |||||||||| ||||||||||| |||||||| Sbjct: 426 cggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggtg 377 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||||||||||| |||||| Sbjct: 341 catggcaaggcggccgttcttgagctcctt 312
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 720 catggcgaggcggccgttcttgatctcctt 691 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||||||||||||| |||| Sbjct: 384 cgcgcccagcatcgcccaccgggagtg 358
>dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F08, full insert sequence Length = 1078 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 367 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 326
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 220 cggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtg 269 |||||||||||| ||| |||||||||| ||||||||||| |||||||| Sbjct: 368 cggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggtg 319 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||||||||||| |||||| Sbjct: 283 catggcgaggcggccgttcttgagctcctt 254
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 720 catggcgaggcggccgttcttgatctcctt 691 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||||||||||||| |||| Sbjct: 384 cgcgcccagcatcgcccaccgggagtg 358
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 746 catggcgaggcggccgttcttgatctcctt 717 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||| |||||||||||||| Sbjct: 410 cgcgcccagcatggcccaccggcagtg 384
>emb|AJ308530.2|RSP308530 Rhodomonas sp. CS24 lhcc1 gene (partial), lhcc2 gene, ORF1, lhcc3 gene and lhcc4 gene Length = 12446 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Plus Query: 299 ggcgagcatggccaggcggccgttcttgatctcc 332 ||||| |||||| ||||||||||||||||||||| Sbjct: 6793 ggcgatcatggcaaggcggccgttcttgatctcc 6826 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctcc 332 ||||| |||||| ||||||||||||||||||||| Sbjct: 1234 ggcgatcatggcaaggcggccgttcttgatctcc 1201 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctc 331 ||||| |||||| |||||||||||||||||||| Sbjct: 9122 ggcgatcatggcgaggcggccgttcttgatctc 9090
>gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding protein presursor (Cab27) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1162 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || |||||||||||| |||||| Sbjct: 325 cccagcatcgcccaccgcccgttcaccagctccgcctgcacg 284
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 220 cggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtg 269 |||||||||||| ||| |||||||||| ||||||||||| |||||||| Sbjct: 782 cggggtcggcgacgtggtcgaagaggttctcgatggggcccttgccggtg 733 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||||||||||| |||||| Sbjct: 697 catggcgaggcggccgttcttgagctcctt 668
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||||||||||||||||||||| Sbjct: 705 catggcgaggcggccgttcttgatctcctt 676 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||| |||||||||||||| Sbjct: 369 cgcgcccagcatggcccaccggcagtg 343
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||||||||||||||||| |||||| Sbjct: 736 catggccaggcggccgttcttgagctcctt 707 Score = 44.1 bits (22), Expect = 0.61 Identities = 43/50 (86%) Strand = Plus / Minus Query: 220 cggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtg 269 |||||||||||||||| || |||||| ||||||||||| |||||||| Sbjct: 821 cggggtcggcgaggtggtcggcgaggttctcgatggggcctttgccggtg 772
>emb|X06602.1|EGLHCPAB Euglena gracilis mRNA for light harvesting chlorophyll a/b protein Length = 681 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| |||||||||||||||||||| Sbjct: 236 catggccagccggccgttcttgatctcctt 207
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||||||| ||||||||||||||||| Sbjct: 1060 catggccaggcgtccgttcttgatctcctt 1031
>gb|M24072.1|CRECABA C.reinhardtii encoding chlorophyll a/b-binding protein (cabII-1) gene, complete cds Length = 2290 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 309 gccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||| Sbjct: 1683 gccaggcggccgttcttgatctcctt 1658
>dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1256 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 309 gccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||| Sbjct: 651 gccaggcggccgttcttgatctcctt 626
>dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1508 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 309 gccaggcggccgttcttgatctcctt 334 |||||||||||||||||||||||||| Sbjct: 1332 gccaggcggccgttcttgatctcctt 1307
>emb|AJ821811.1| Guillardia theta partial mRNA for light harvesting protein 5 (lhc5 gene) Length = 678 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctc 331 ||||| |||||| |||||||||||||||||||| Sbjct: 609 ggcgatcatggcaaggcggccgttcttgatctc 577
>gb|AF268324.1|AF268324 Guillardia theta light-harvesting complex protein LHCC13 mRNA, complete cds Length = 787 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctc 331 ||||| |||||| |||||||||||||||||||| Sbjct: 545 ggcgatcatggcgaggcggccgttcttgatctc 513
>emb|BX822414.1|CNS0A63B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 889 Score = 50.1 bits (25), Expect = 0.010 Identities = 83/101 (82%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcc-cgccgcgcccag 657 ||||||||||| |||||||| || || | |||||||||||| || || ||| || || || Sbjct: 394 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccgcgcggctcctag 335 Query: 658 catcgcccaccggcagtgcaccagctccgcttgcacgttcc 698 ||| ||||| |||||||| || | ||| ||||| ||||||| Sbjct: 334 catagcccatcggcagtggactatctcggcttgtacgttcc 294
>gb|AY104614.1| Zea mays PCO084486 mRNA sequence Length = 1214 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||||||||||||||||||| Sbjct: 864 ggcgagcatggcgagcctgccgttcttgatctccttg 828
>gb|AY847687.1| Dunaliella salina chloroplast chlorophyll a-b binding protein mRNA, partial cds; nuclear gene for chloroplast product Length = 653 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 290 gcccatgacggcgagcatggccaggcggccgttcttgatctcctt 334 ||||| || ||| ||||||||||||||||||||||| | |||||| Sbjct: 555 gcccaggaaggcaagcatggccaggcggccgttcttcagctcctt 511
>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein of photosystem II Length = 7650 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 303 agcatggccaggcggccgttcttgatctcctt 334 ||||||||||||||||||||||| | |||||| Sbjct: 3746 agcatggccaggcggccgttcttcacctcctt 3715 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| ||||||||||||| |||||| Sbjct: 7000 catggccagccggccgttcttgacctcctt 6971 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||||||||||||||| | |||||| Sbjct: 4900 catggccaggcggccgttcttcagctcctt 4871 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||||||||||||||| | |||||| Sbjct: 1457 catggccaggcggccgttcttcagctcctt 1428 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| ||||||||||||| |||||| Sbjct: 216 catggccagccggccgttcttgacctcctt 187
>gb|AF517869.1| Griffithsia japonica isolate Gj446 light-harvest protein mRNA, partial cds Length = 758 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcc 332 |||||||||||| ||||||||||||||| Sbjct: 519 catggccaggcgtccgttcttgatctcc 492
>gb|AF359118.1| Pinus sylvestris plus tree E1101 LHC I type II chlorophyll binding protein (LHCA2) gene, partial cds; nuclear gene for chloroplast product Length = 674 Score = 48.1 bits (24), Expect = 0.039 Identities = 57/68 (83%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| || | ||| |||| ||||||||| |||||||| || || || |||||| Sbjct: 533 gtgttgaggatccccaacttagtcaacagctctggaatgaagattccagctgcccccagc 474 Query: 659 atcgccca 666 || ||||| Sbjct: 473 attgccca 466
>gb|AF359117.1| Pinus sylvestris plus tree E635C LHC I type II chlorophyll binding protein (LHCA2) gene, partial cds; nuclear gene for chloroplast product Length = 676 Score = 48.1 bits (24), Expect = 0.039 Identities = 57/68 (83%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| || | ||| |||| ||||||||| |||||||| || || || |||||| Sbjct: 535 gtgttgaggatccccaacttagtcaacagctctggaatgaagattccagctgcccccagc 476 Query: 659 atcgccca 666 || ||||| Sbjct: 475 attgccca 468
>emb|BX825372.1|CNS0A4Z2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 931 Score = 48.1 bits (24), Expect = 0.039 Identities = 63/76 (82%) Strand = Plus / Minus Query: 599 gtgttgaggatgccgatcttggtcagcagctctgggatgaagatgcccgccgcgcccagc 658 ||||||||||| |||||||| || || | |||||||||||| || || || || || ||| Sbjct: 389 gtgttgaggattccgatcttcgttaggaactctgggatgaatatcccggcggctcctagc 330 Query: 659 atcgcccaccggcagt 674 || ||||| ||||||| Sbjct: 329 atagcccatcggcagt 314 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttgagctt 355 |||||||||| ||||||||| | || |||||||||||| Sbjct: 662 ccgttcttgaactccttggtcctcaactccttgagctt 625
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttga 327 ||||||||||||||||||||||| Sbjct: 954547 catggccaggcggccgttcttga 954525 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 catgacggcgagcatggccag 313 ||||||||||||||||||||| Sbjct: 2323449 catgacggcgagcatggccag 2323429
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 700 catggcgaggcggccattcttgatctccttg 670
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 724 catggcgaggcggccattcttgatctccttg 694
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 724 catggcgaggcggccattcttgatctccttg 694
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 726 catggcgaggcggccattcttgatctccttg 696
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 729 catggcgaggcggccattcttgatctccttg 699
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 729 catggcgaggcggccattcttgatctccttg 699
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 731 catggcgaggcggccattcttgatctccttg 701
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 764 catggcgaggcggccattcttgatctccttg 734
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtg 675 |||||||||||||||||||||| |||| Sbjct: 776 cgcgcccagcatcgcccaccgggagtg 750 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatct 330 |||||| ||||||||||||||||||| Sbjct: 1112 catggcgaggcggccgttcttgatct 1087
>gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulgare=barley, Prato, mRNA Chloroplast, 939 nt] Length = 939 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Minus Query: 616 cttggtcagcagctctgggatgaagatgcccgccgcgcccagcatcgcccaccggcagtg 675 ||||||||||| ||| ||||| | || |||||| | ||||||||||||||||| | || Sbjct: 291 cttggtcagcacctccgggatcagcatccccgccacccccagcatcgcccaccgcccgtt 232 Query: 676 caccagctccgcttgcacg 694 ||||| ||||| |||||| Sbjct: 231 caccacgtccgcctgcacg 213
>gb|AF110787.1|AF110787 Volvox carteri f. nagariensis clone G12 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1162 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 312 aggcggccgttcttgatctccttggtg 338 |||||||||||||||| |||||||||| Sbjct: 511 aggcggccgttcttgacctccttggtg 485
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 95804 catggcgaggcggccattcttgatctccttg 95774
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 729 catggcgaggcggccattcttgatctccttg 699
>dbj|AK105002.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-E07, full insert sequence Length = 1568 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 186 ttgggggcgaaggcccggaagatggtggcatggcc 220 ||||||| ||||||| ||||||||||||| ||||| Sbjct: 1343 ttgggggtgaaggcctggaagatggtggcgtggcc 1309
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 729 catggcgaggcggccattcttgatctccttg 699
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 729 catggcgaggcggccattcttgatctccttg 699
>emb|X95326.1|CRRNA818 C.reinhardtii mRNA for LI818r-3 protein Length = 1542 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttggt 337 ||||| |||||||||||||||||| || | ||||||||| Sbjct: 650 ggcgatcatggccaggcggccgttgttcagctccttggt 612
>emb|X95307.1|CRDNA818 C.reinhardtii LI818r-1 gene Length = 1019 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttggt 337 ||||| |||||||||||||||||| || | ||||||||| Sbjct: 860 ggcgatcatggccaggcggccgttgttcagctccttggt 822
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 700 catggcgaggcggccattcttgatctccttg 670
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 729 catggcgaggcggccattcttgatctccttg 699
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 724 catggcgaggcggccattcttgatctccttg 694
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 724 catggcgaggcggccattcttgatctccttg 694
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 729 catggcgaggcggccattcttgatctccttg 699
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 725 catggcgaggcggccattcttgatctccttg 695
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 731 catggcgaggcggccattcttgatctccttg 701
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctccttg 335 |||||| |||||||| ||||||||||||||| Sbjct: 729 catggcgaggcggccattcttgatctccttg 699
>emb|X12860.1|EGLHCI35 Euglena gracilis mRNA fragment for LHCI protein LH35 Length = 1124 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctc 331 ||||||||| ||||||||||||||||| Sbjct: 879 catggccagtcggccgttcttgatctc 853
>ref|NM_122728.1| Arabidopsis thaliana chlorophyll binding AT5G28450 mRNA, complete cds Length = 522 Score = 44.1 bits (22), Expect = 0.61 Identities = 31/34 (91%) Strand = Plus / Minus Query: 318 ccgttcttgatctccttggtgcgcagctccttga 351 |||||||||||||||||||| | || |||||||| Sbjct: 386 ccgttcttgatctccttggtcctcaactccttga 353
>gb|AY954736.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca5 gene, complete cds; nuclear gene for chloroplast product Length = 957 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 gcggccgttcttgatctccttg 335 |||||||||||||||||||||| Sbjct: 810 gcggccgttcttgatctccttg 789
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| || ||||||||||||||||| Sbjct: 40119 catggccagccgcccgttcttgatctcctt 40090
>gb|AY646197.1| Chlorella pyrenoidosa chloroplast light-harvesting complex II (Lhc II) mRNA, partial cds; nuclear gene for chloroplast product Length = 537 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| || ||||||||||||||||| Sbjct: 429 catggccagacgaccgttcttgatctcctt 400
>gb|DQ018375.1| Pinus gerardiana chloroplast putative light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 760 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||| ||| ||||||||||||||||| Sbjct: 683 catggccaagcgcccgttcttgatctcctt 654 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||| |||||||||||||| Sbjct: 346 gcgcccagcattgcccaccggcagtg 321
>gb|AY617095.1| Pinus nelsonii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||| ||| ||||||||||||||||| Sbjct: 683 catggccaagcgcccgttcttgatctcctt 654 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||| |||||||||||||| Sbjct: 346 gcgcccagcattgcccaccggcagtg 321
>gb|AY617094.1| Pinus longaeva chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 759 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||| ||| ||||||||||||||||| Sbjct: 672 catggccaagcgcccgttcttgatctcctt 643 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||| |||||||||||||| Sbjct: 335 gcgcccagcattgcccaccggcagtg 310
>gb|AY617093.1| Pinus remota chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||| ||| ||||||||||||||||| Sbjct: 683 catggccaagcgcccgttcttgatctcctt 654 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||| |||||||||||||| Sbjct: 346 gcgcccagcattgcccaccggcagtg 321
>gb|AY617092.1| Pinus monophylla chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||| ||| ||||||||||||||||| Sbjct: 683 catggccaagcgcccgttcttgatctcctt 654 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||| |||||||||||||| Sbjct: 346 gcgcccagcattgcccaccggcagtg 321
>gb|AY617086.1| Pinus roxburghii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||| |||||||||||||| Sbjct: 346 gcgcccagcattgcccaccggcagtg 321
>gb|AY617085.1| Pinus merkusii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||| |||||||||||||| Sbjct: 346 gcgcccagcattgcccaccggcagtg 321
>gb|AY617083.1| Pinus radiata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||| |||||||||||||| Sbjct: 346 gcgcccagcattgcccaccggcagtg 321
>gb|AY617082.1| Pinus ponderosa chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||| |||||||||||||| Sbjct: 346 gcgcccagcattgcccaccggcagtg 321
>gb|AY617081.1| Pinus echinata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 762 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||| |||||||||||||| Sbjct: 346 gcgcccagcattgcccaccggcagtg 321
>gb|S73603.1| Pinus thunbergii chlorophyll a/b-binding protein (LHCPII) mRNA, complete cds Length = 998 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||| |||||||||||||| Sbjct: 392 gcgcccagcattgcccaccggcagtg 367
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| || ||||||||||||||||| Sbjct: 7581033 catggccagccgcccgttcttgatctcctt 7581004 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 ccgacgtcggtgccggtgagcttg 436 |||||||||||||||| ||||||| Sbjct: 1087505 ccgacgtcggtgccggcgagcttg 1087482
>dbj|D00571.1|PYPLHABBP Pyrus pyrifolia var. culta mRNA for light harvesting a/b binding protein, complete cds Length = 1055 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||||||||||||| |||| Sbjct: 427 gcgcccagcatcgcccaccgggagtg 402
>gb|AF262038.1|F21B23 Arabidopsis thaliana BAC F21B23 Length = 71284 Score = 44.1 bits (22), Expect = 0.61 Identities = 31/34 (91%) Strand = Plus / Plus Query: 318 ccgttcttgatctccttggtgcgcagctccttga 351 |||||||||||||||||||| | || |||||||| Sbjct: 55329 ccgttcttgatctccttggtcctcaactccttga 55362
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 309 gccaggcggccgttcttgatctcctt 334 |||||||| ||||||||||||||||| Sbjct: 85675 gccaggcgaccgttcttgatctcctt 85650
>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| || ||||||||||||||||| Sbjct: 2102 catggccagccgtccgttcttgatctcctt 2073
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||||||||||| |||||| Sbjct: 1545 catggcgaggcggccgttcttgagctcctt 1516
>emb|X14506.1|PSCABIIB Pinus sylvestris cab II/1B mRNA for chlorophyll a/b-binding protein Length = 1006 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||| |||||||||||||| Sbjct: 401 gcgcccagcattgcccaccggcagtg 376
>emb|X14505.1|PSCABIIA Pinus sylvestris cab II/1A mRNA for chlorophyll a/b-binding protein Length = 1083 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 650 gcgcccagcatcgcccaccggcagtg 675 ||||||||||||||||||||| |||| Sbjct: 420 gcgcccagcatcgcccaccgggagtg 395
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||||||||||| |||||| Sbjct: 675 catggcgaggcggccgttcttgagctcctt 646
>dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F05, full insert sequence Length = 1157 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| || ||||||||||||||||| Sbjct: 798 catggccagccgcccgttcttgatctcctt 769
>dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B10, full insert sequence Length = 1101 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| || ||||||||||||||||| Sbjct: 788 catggccagccgcccgttcttgatctcctt 759
>dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121A03, full insert sequence Length = 1190 Score = 44.1 bits (22), Expect = 0.61 Identities = 37/42 (88%) Strand = Plus / Minus Query: 653 cccagcatcgcccaccggcagtgcaccagctccgcttgcacg 694 ||||||||||||||||| | || ||||||| |||| |||||| Sbjct: 360 cccagcatcgcccaccgcccgttcaccagccccgcctgcacg 319
>dbj|AK066997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091K09, full insert sequence Length = 1202 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 309 gccaggcggccgttcttgatctcctt 334 |||||||| ||||||||||||||||| Sbjct: 847 gccaggcgaccgttcttgatctcctt 822
>dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D05, full insert sequence Length = 1186 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| || ||||||||||||||||| Sbjct: 799 catggccagccgcccgttcttgatctcctt 770
>gb|AY105650.1| Zea mays PCO135935 mRNA sequence Length = 1366 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| || |||||||||||||||||||| Sbjct: 883 catggcgagccggccgttcttgatctcctt 854
>gb|AY855171.1| Eleusine coracana subsp. coracana clone 1 light harvesting protein mRNA, partial cds Length = 364 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| | |||||||||||||||||| Sbjct: 51 catggccagcctgccgttcttgatctcctt 22
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||||||||||| |||||| Sbjct: 443 catggcgaggcggccgttcttgagctcctt 414 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccg 669 ||||||||||||||||||||| Sbjct: 107 cgcgcccagcatcgcccaccg 87
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||| |||||||||||||| Sbjct: 661 catggcgaggcggccattcttgatctcctt 632
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| || ||||||||||||||||| Sbjct: 7651120 catggccagccgcccgttcttgatctcctt 7651091 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 ccgacgtcggtgccggtgagcttg 436 |||||||||||||||| ||||||| Sbjct: 1085226 ccgacgtcggtgccggcgagcttg 1085203
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| ||||| ||||||||||||||||| Sbjct: 675 catggcaaggcgaccgttcttgatctcctt 646
>gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-1) mRNA, complete cds Length = 957 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| || |||||||||||||||||||| Sbjct: 741 catggcgagccggccgttcttgatctcctt 712
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||| |||||||||||||| Sbjct: 866 catggcgaggcggccattcttgatctcctt 837
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| || ||||||||||||||||| Sbjct: 1399 catggccagccgcccgttcttgatctcctt 1370
>gb|M95068.1|MZEORFI Zea mays putative light-harvesting chlorophyll A/B binding protein mRNA, partial cds Length = 191 Score = 44.1 bits (22), Expect = 0.61 Identities = 42/50 (84%) Strand = Plus / Minus Query: 220 cggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtg 269 ||||||||| | ||| |||||||||| ||||||||||| |||||||| Sbjct: 60 cggggtcggssacgtggtcgaagaggttctcgatggggcccttgccggtg 11
>dbj|D85512.1| Oryza sativa (japonica cultivar-group) CP26 mRNA, partial sequence Length = 556 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 ||||||||| || ||||||||||||||||| Sbjct: 253 catggccagccgcccgttcttgatctcctt 224
>dbj|AB026686.1| Physcomitrella patens mRNA for chlorophyll a/b-binding protein precursor, complete cds Length = 964 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||||| |||||||||||||||||||| Sbjct: 711 catggccaatcggccgttcttgatctcctt 682
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 44.1 bits (22), Expect = 0.61 Identities = 43/50 (86%) Strand = Plus / Minus Query: 220 cggggtcggcgaggtgagcgaagaggttgtcgatggggccggtgccggtg 269 ||||||||| || ||| |||||||||| ||||||||||| |||||||| Sbjct: 774 cggggtcggtgacgtggtcgaagaggttctcgatggggcccttgccggtg 725 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||||||||||| |||||| Sbjct: 689 catggcgaggcggccgttcttgagctcctt 660
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 catggccaggcggccgttcttgatctcctt 334 |||||| |||||||| |||||||||||||| Sbjct: 701 catggcgaggcggcctttcttgatctcctt 672 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 649 cgcgcccagcatcgcccaccggcagtgcaccagctcc 685 |||||||||||||||||| ||| |||| | ||||||| Sbjct: 365 cgcgcccagcatcgcccatcgggagtggatcagctcc 329
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tcggcgaggtgagcgaagagg 245 ||||||||||||||||||||| Sbjct: 2896410 tcggcgaggtgagcgaagagg 2896390
>ref|XM_464479.1| Oryza sativa (japonica cultivar-group), mRNA Length = 675 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 613 ggcgagcatggcgagcctgccattcttgatctccttg 577
>ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 761 ggcgagcatggcgagcctgccattcttgatctccttg 725
>ref|XM_507457.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1078 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 761 ggcgagcatggcgagcctgccattcttgatctccttg 725
>ref|XM_507456.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 761 ggcgagcatggcgagcctgccattcttgatctccttg 725
>ref|XM_507455.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1112 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 744 ggcgagcatggcgagcctgccattcttgatctccttg 708
>ref|XM_507454.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 753 ggcgagcatggcgagcctgccattcttgatctccttg 717
>ref|XM_507453.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 759 ggcgagcatggcgagcctgccattcttgatctccttg 723
>ref|XM_507452.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 759 ggcgagcatggcgagcctgccattcttgatctccttg 723
>ref|XM_507451.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 761 ggcgagcatggcgagcctgccattcttgatctccttg 725
>ref|XM_507450.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 761 ggcgagcatggcgagcctgccattcttgatctccttg 725
>ref|XM_507449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 761 ggcgagcatggcgagcctgccattcttgatctccttg 725
>ref|XM_507448.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 761 ggcgagcatggcgagcctgccattcttgatctccttg 725
>ref|XM_464480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 649 ggcgagcatggcgagcctgccattcttgatctccttg 613
>ref|XM_507447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 777 ggcgagcatggcgagcctgccattcttgatctccttg 741
>ref|XM_507446.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 777 ggcgagcatggcgagcctgccattcttgatctccttg 741
>ref|XM_507445.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 780 ggcgagcatggcgagcctgccattcttgatctccttg 744
>ref|XM_507444.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 780 ggcgagcatggcgagcctgccattcttgatctccttg 744
>ref|XM_507443.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1151 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 783 ggcgagcatggcgagcctgccattcttgatctccttg 747
>ref|XM_507442.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1168 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 800 ggcgagcatggcgagcctgccattcttgatctccttg 764
>ref|XM_507441.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1198 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 299 ggcgagcatggccaggcggccgttcttgatctccttg 335 |||||||||||| || | ||| ||||||||||||||| Sbjct: 830 ggcgagcatggcgagcctgccattcttgatctccttg 794 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,648,612 Number of Sequences: 3902068 Number of extensions: 4648612 Number of successful extensions: 91180 Number of sequences better than 10.0: 356 Number of HSP's better than 10.0 without gapping: 363 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88915 Number of HSP's gapped (non-prelim): 2159 length of query: 698 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 675 effective length of database: 17,143,297,704 effective search space: 11571725950200 effective search space used: 11571725950200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
