ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdk19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GUB2_HORVU (P12257) Lichenase-2 precursor (EC 3.2.1.73) (Lichena... 32 0.59

>GUB2_HORVU (P12257) Lichenase-2 precursor (EC 3.2.1.73) (Lichenase II)|
           (Endo-beta-1,3-1,4 glucanase II)
           ((1->3,1->4)-beta-glucanase isoenzyme EII) (Fragment)
          Length = 312

 Score = 31.6 bits (70), Expect = 0.59
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -2

Query: 218 WGLFYXNMQHVYXIS 174
           WGLFY NMQHVY I+
Sbjct: 297 WGLFYPNMQHVYPIN 311


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,519,996
Number of Sequences: 219361
Number of extensions: 229273
Number of successful extensions: 250
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 80,573,946
effective HSP length: 48
effective length of database: 70,044,618
effective search space used: 1681070832
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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