>CREG1_HUMAN (O75629) CREG1 protein precursor (Cellular repressor of|
           E1A-stimulated genes 1)
          Length = 220

 Score = 96.7 bits (239), Expect = 5e-20
 Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
 Frame = -1

Query: 613 GVPGKXHGIPYFYLTTXDPTAXXALEDEXTSFTLSEFPLGTCGK--VDPENPTCAKLTLT 440
           G PG   G+PYFYL+    +     E+   + T++      C K   DP++P C  + L+
Sbjct: 94  GPPGAGSGVPYFYLSPLQLSVSNLQENPYATLTMTLAQTNFCKKHGFDPQSPLCVHIMLS 153

Query: 439 GKLKMVDHKSPEADLAKTALFSKHPEMEGWPKNHHFEIFKLEIENIFLIDWFGGPKPISP 260
           G +  V+    E D+AK +LF +HPEM+ WP +H++   KL I NI+++D+FGGPK ++P
Sbjct: 154 GTVTKVNET--EMDIAKHSLFIRHPEMKTWPSSHNWFFAKLNITNIWVLDYFGGPKIVTP 211

Query: 259 SQY 251
            +Y
Sbjct: 212 EEY 214

>CREG1_CHICK (Q5ZJ73) CREG1 protein precursor|
          Length = 192

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
 Frame = -1

Query: 607 PGKXHGIPYFYLTTXDPTAXXALEDEXTSFTLSEFPLGTCGK--VDPENPTCAKLTLTGK 434
           PG   G+PY YLT  + +      +   S T+S      C K   DP+NP CA +   G 
Sbjct: 69  PGGGSGVPYLYLTDMEISVQDLEVNSNASLTVSLAQTPYCKKHRYDPQNPLCAHIIFCGS 128

Query: 433 LKMVDHKSPEADLAKTALFSKHPEMEGWPKNHHFEIFKLEIENIFLIDWFGGPKPISPSQ 254
           +  V+    EA LAK ALF++HPEME WPK+H++   K  I NI+++D+FGG K ++P +
Sbjct: 129 IVKVNDS--EAALAKKALFTRHPEMESWPKDHNWFYAKFNITNIWVLDYFGGLKIVTPEE 186

Query: 253 Y 251
           Y
Sbjct: 187 Y 187

>CREG2_HUMAN (Q8IUH2) CREG2 protein precursor|
          Length = 290

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
 Frame = -1

Query: 592 GIPYFYLTTXDPTAXXALEDEXTSFTLSEFPLGTCGK--VDPENPTCAKLTLTGKLKMVD 419
           GIP+FY+T  DP     +++   S  L E     C K  VDPE+P C +LTLTG++  V 
Sbjct: 169 GIPFFYMTAKDPVVADLMKNPMASLMLPESEGEFCRKNIVDPEDPRCVQLTLTGQMIAVS 228

Query: 418 HKSPEADLAKTALFSKHPEMEGWPKNHHFEIFKLEIENIFLIDWFGGPKPISPSQYLE 245
            +  E + AK A+FS+HP M  WP+ + +   K+ IE+I+L  W+GG   IS  +Y +
Sbjct: 229 PE--EVEFAKQAMFSRHPGMRKWPRQYEWFFMKMRIEHIWLQKWYGGASSISREEYFK 284

>CREG2_MOUSE (Q8BGC9) CREG2 protein precursor|
          Length = 288

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
 Frame = -1

Query: 592 GIPYFYLTTXDPTAXXALEDEXTSFTLSEFPLGTCGK--VDPENPTCAKLTLTGKLKMVD 419
           GIP+FY+T  DP     +++   S  L E     C K  VDPE+P CA+LTLTG+  MV 
Sbjct: 167 GIPFFYMTAKDPAVADLVKNPTASLVLPESEGEFCRKNIVDPEDPRCARLTLTGR--MVT 224

Query: 418 HKSPEADLAKTALFSKHPEMEGWPKNHHFEIFKLEIENIFLIDWFGGPKPISPSQYLE 245
               E + AK A+FS+HP M  WP+ + +   K+ +E+I+L  W+GG   I   +Y +
Sbjct: 225 VPPGEVEFAKQAMFSRHPGMRKWPRQYEWFFMKMWVEHIWLQKWYGGVSDIPREEYFK 282

>CREG1_MOUSE (O88668) CREG1 protein precursor (Cellular repressor of|
           E1A-stimulated genes 1)
          Length = 220

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
 Frame = -1

Query: 613 GVPGKXHGIPYFYLTTXDPTAXXALEDEXTSFTLSEFPLGTCGK--VDPENPTCAKLTLT 440
           G PG+  G PY YL+          E+   + T+S      C     DP++P C  + ++
Sbjct: 94  GPPGEGTGEPYMYLSPLQQAVSDLQENPEATLTMSLAQTVYCRNHGFDPQSPLCVHIMMS 153

Query: 439 GKLKMVDHKSPEADLAKTALFSKHPEMEGWPKNHHFEIFKLEIENIFLIDWFGGPKPISP 260
           G +  V+    E D A+ +LF +HPEM+ WP +H++   KL+I  I+++D+FGGPK ++P
Sbjct: 154 GTVTKVN--KTEEDYARDSLFVRHPEMKHWPSSHNWFFAKLKISRIWVLDYFGGPKVVTP 211

Query: 259 SQY 251
            +Y
Sbjct: 212 EEY 214

>CYSN_VIBCH (Q9KP20) Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)|
           (Sulfate adenylate transferase) (SAT) (ATP-sulfurylase
           large subunit)
          Length = 476

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
 Frame = -1

Query: 451 LTLTGKLKMVDHKSP--EADLAKTALFSKHPEMEGWPKNHHFEIFKLEIENIF----LID 290
           +    K+ +VD+     E   A+   FSKH  ++G  +     +  LE +N+     L+D
Sbjct: 163 IVAVNKMDLVDYSQDRFEQIRAEYLEFSKH--LQGETEIQIIPLSALEGDNVVEKSRLMD 220

Query: 289 WFGGPKPISPSQYLEYGRDQGSVMF 215
           W+ GP  +   +Y++  RD+ S  F
Sbjct: 221 WYQGPSLLELLEYVDIDRDKSSGAF 245

>TRUD_MANSM (Q65Q80) tRNA pseudouridine synthase D (EC 5.4.99.-) (tRNA-uridine|
           isomerase D) (tRNA pseudouridylate synthase D)
          Length = 337

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 15/62 (24%), Positives = 33/62 (53%)
 Frame = +3

Query: 150 RLSESIGKHAKDMGFSSIRAHKNITEPWSLPYSRYCEGDIGLGPPNQSIKNMFSISSLKI 329
           +L++ +G   ++MG++ ++  K +TE W      +C    G   P+ S  NM  +  L++
Sbjct: 58  QLAKFVGLSPRNMGYAGLKDRKAVTEQW------FCLQMPGKAMPDFSRFNMAGVEILQV 111

Query: 330 SK 335
           ++
Sbjct: 112 TR 113

>R1A4_SOLDE (Q6L439) Putative late blight resistance protein homolog R1A-4|
          Length = 1096

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 228 PWSLPYSRYCEGDIGLGPPNQSIKNMFSISSLKISK 335
           P  LPY RY   DIG      SI N++++ +L +++
Sbjct: 805 PTELPYLRYLTADIGQNSIPSSISNLWNLETLILNR 840

>NFKB1_DROME (Q94527) Nuclear factor NF-kappa-B p110 subunit (Relish protein)|
           (Rel-p110) [Contains: Nuclear factor NF-kappa-B p68
           subunit (Rel-p68); Nuclear factor NF-kappa-B p49 subunit
           (Rel-p49)]
          Length = 971

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 81  LCRHK-DNITCLFNRRPLQYVQFGRLSESIGKHAKDMGFSSIR 206
           LC+ K D +    NRR L + Q   L +   + AKDM  + +R
Sbjct: 264 LCKKKQDRLVFQMNRRELSHKQLQELHQETEREAKDMNLNQVR 306

>FLNC_HUMAN (Q14315) Filamin-C (Gamma-filamin) (Filamin-2) (Protein FLNc)|
           (Actin-binding-like protein) (ABP-L) (ABP-280-like
           protein)
          Length = 2725

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 367 PEMEGWPKNHHFEIFKLEIENIFLIDWFGGPKPISPSQYLEYGRDQGSVM 218
           P+ E W  N   E  +  ++     DW G P+ I+P + ++   D+ SVM
Sbjct: 204 PDWEAWDPNQPVENSREAMQQAD--DWLGVPQVIAPEEIVDPNVDEHSVM 251


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,238,606
Number of Sequences: 219361
Number of extensions: 2007282
Number of successful extensions: 4363
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4353
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)