ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdl06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475457.1| Oryza sativa (japonica cultivar-group), predic... 466 e-128
2dbj|AK101147.1| Oryza sativa (japonica cultivar-group) cDNA clon... 466 e-128
3dbj|AK105601.1| Oryza sativa (japonica cultivar-group) cDNA clon... 450 e-123
4dbj|AK073984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 329 7e-87
5gb|AY112405.1| Zea mays CL10251_1 mRNA sequence 168 2e-38
6dbj|AK071895.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
7gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 103 8e-19
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 103 8e-19
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 68 4e-08
10gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str... 68 4e-08
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
12dbj|AK059138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 3e-06
13ref|NM_102070.2| Arabidopsis thaliana unknown protein AT1G22200 ... 54 6e-04
14ref|NM_001036000.1| Arabidopsis thaliana unknown protein AT1G222... 54 6e-04
15gb|AY113908.1| Arabidopsis thaliana unknown protein (At1g22200) ... 54 6e-04
16gb|AF370338.1| Arabidopsis thaliana unknown protein (At1g22200) ... 54 6e-04
17gb|AY085626.1| Arabidopsis thaliana clone 16380 mRNA, complete s... 54 6e-04
18gb|AC073942.2|F16L1 Sequence of BAC F16L1 from Arabidopsis thali... 54 6e-04
19gb|AY112254.1| Zea mays CL9004_1 mRNA sequence 52 0.002
20gb|AC113287.8| Mus musculus chromosome 3, clone RP23-412L13, com... 48 0.039
21emb|AL645862.14| Mouse DNA sequence from clone RP23-223A11 on ch... 46 0.15
22gb|AC007571.6| Drosophila melanogaster, chromosome 3R, region 85... 44 0.60
23gb|AE003679.2| Drosophila melanogaster chromosome 3R, section 17... 44 0.60
24ref|NM_103301.2| Arabidopsis thaliana unknown protein AT1G36050 ... 42 2.4
25emb|BX510307.21| Zebrafish DNA sequence from clone DKEY-9F17 in ... 42 2.4
26ref|XM_847798.1| PREDICTED: Canis familiaris similar to ER-Golgi... 42 2.4
27ref|XM_861389.1| PREDICTED: Canis familiaris similar to ER-Golgi... 42 2.4
28emb|BX815508.1|CNS0ABCC Arabidopsis thaliana Full-length cDNA Co... 42 2.4
29emb|BX818235.1|CNS0AB0A Arabidopsis thaliana Full-length cDNA Co... 42 2.4
30gb|BT003147.1| Arabidopsis thaliana At1g36050 mRNA, complete cds 42 2.4
31gb|U61950.2| Caenorhabditis elegans cosmid C45E5, complete sequence 40 9.4
32ref|XM_454618.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E14872g ... 40 9.4
33gb|AC110883.12| Mus musculus chromosome 8, clone RP23-200N24, co... 40 9.4
34gb|AC118545.20| Mus musculus strain C57BL/6J clone rp23-324o14 m... 40 9.4
35emb|CT010495.9| Mouse DNA sequence from clone RP23-226G14 on chr... 40 9.4
36emb|BX547934.18| Zebrafish DNA sequence from clone DKEY-161J23 i... 40 9.4
37gb|AC122514.4| Mus musculus BAC clone RP24-455L10 from chromosom... 40 9.4
38gb|AC092167.2| Homo sapiens BAC clone RP11-765N2 from 7, complet... 40 9.4
39gb|U41008.1| Caenorhabditis elegans cosmid F44E8, complete sequence 40 9.4
40emb|AL596245.3| Human DNA sequence from clone RP11-573C10 on chr... 40 9.4
41emb|AL513342.7| Human DNA sequence from clone RP11-96F14 on chro... 40 9.4
42emb|AL139374.18| Human DNA sequence from clone RP11-118F16 on ch... 40 9.4
43emb|AL035448.29|HS742J24 Human DNA sequence from clone RP4-742J2... 40 9.4
44emb|AL031733.3|HS455J7 Human DNA sequence from clone RP3-455J7 o... 40 9.4
45ref|XM_782112.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.4
46emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 9.4
47emb|AL954167.4| Mouse DNA sequence from clone RP23-300M3 on chro... 40 9.4
48emb|BX510646.5| Zebrafish DNA sequence from clone CH211-221B16 i... 40 9.4
49emb|BX936309.9| Zebrafish DNA sequence from clone CH211-214N2 in... 40 9.4
50gb|AC063962.11| Homo sapiens chromosome 10 clone RP11-222G7, com... 40 9.4
51gb|AC018511.5| Homo sapiens chromosome 10 clone RP11-77G23, comp... 40 9.4
52gb|AC104701.5| Homo sapiens BAC clone RP11-772N1 from 4, complet... 40 9.4
53gb|AC024474.8| Homo sapiens chromosome 15, clone RP11-686I6, com... 40 9.4
54gb|AC006228.5|AC006228 Genomic sequence for Arabidopsis thaliana... 40 9.4
55gb|AC021666.5|AC021666 Arabidopsis thaliana chromosome 1 BAC T22... 40 9.4
56gb|AC067719.12| Homo sapiens 3 BAC RP11-183L23 (Roswell Park Can... 40 9.4
57gb|AF279923.1|AF279923 Pan troglodytes isolate PANC dystrophin (... 40 9.4
58dbj|AK173193.1| Mus musculus mRNA for mKIAA1529 protein 40 9.4
59emb|AJ329714.1|HSA329714 Homo sapiens genomic sequence surroundi... 40 9.4
60gb|AC154423.2| Mus musculus BAC clone RP24-221B7 from 17, comple... 40 9.4
61gb|AC091777.26| Mus musculus strain C57BL/6J chromosome 17 clone... 40 9.4
62gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, com... 40 9.4
63emb|AL672180.11| Mouse DNA sequence from clone RP23-419G22 on ch... 40 9.4
64emb|AL772381.5| Mouse DNA sequence from clone RP23-358I3 on chro... 40 9.4
65emb|AL807233.10| Mouse DNA sequence from clone RP23-174O19 on ch... 40 9.4
66gb|AC087859.3| Homo sapiens chromosome 3 clone RP11-34L16 map 3p... 40 9.4
67gb|AC091404.2| Sus scrofa clone RP44-74O11, complete sequence 40 9.4 
>ref|XM_475457.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1155

 Score =  466 bits (235), Expect = e-128
 Identities = 382/431 (88%)
 Strand = Plus / Minus

                                                                        
Query: 259  tcatctgtacttgcctatctccattttcttcttaagtgccttctgtccatggtatatgaa 318
            ||||||||||||||||| ||||||||| ||||| ||||||||||| || || ||||||||
Sbjct: 1155 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 1096

                                                                        
Query: 319  cgagtcgatgatgccagcgacagtgaagatccctccgactatagcacacaggtttgtcag 378
            |||||| |||||||| | ||| ||||| | |||||| ||||||||||| ||||| |||||
Sbjct: 1095 cgagtcaatgatgccggagacggtgaaaacccctcccactatagcacataggttcgtcag 1036

                                                                        
Query: 379  gtagtggaggaaggatctattctcctctgtaaatatcacctttatcggtgagaaatcata 438
             |||||||| | ||| ||||| || ||||||||||| |||||||| ||||||||||||||
Sbjct: 1035 atagtggagcagggaactattttcttctgtaaatattacctttatgggtgagaaatcata 976

                                                                        
Query: 439  gaagaaaaatactccaggttggggtctcggttgaacatttccatctctaaagtgctccgt 498
            |||||||||||||||||| |||||| | ||  ||| ||| ||||||||||| ||||| ||
Sbjct: 975  gaagaaaaatactccaggctggggtttggggcgaatattcccatctctaaaatgctctgt 916

                                                                        
Query: 499  tactgagaattggtttgaatcgatcttgcgccctcttatatcattataaattgtagggac 558
            ||||||||||||||| ||||  |||||||||||||||| |||| | ||||||||||| ||
Sbjct: 915  tactgagaattggttggaatgaatcttgcgccctcttagatcagtgtaaattgtaggaac 856

                                                                        
Query: 559  aacttttatgaagtattggtatgtcccatctgaagcgggctgtgtccactgagcaccatc 618
            ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 855  aacttttatgaagtattggtatgtcccatctgatgctggttgtgtccactgagcaccatc 796

                                                                        
Query: 619  aagtggattgacagcaccagggaattctgtcccaaaggacagtttgtttattttgtgggt 678
            ||||||||| ||| |||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct: 795  aagtggattaacaacaccagggaattctgtcccaaaagacagtttatttattttgtgtgt 736

                       
Query: 679  aatattgaaac 689
             || |||||||
Sbjct: 735  gatgttgaaac 725
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>dbj|AK101147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026P06, full
            insert sequence
          Length = 1874

 Score =  466 bits (235), Expect = e-128
 Identities = 382/431 (88%)
 Strand = Plus / Minus

                                                                        
Query: 259  tcatctgtacttgcctatctccattttcttcttaagtgccttctgtccatggtatatgaa 318
            ||||||||||||||||| ||||||||| ||||| ||||||||||| || || ||||||||
Sbjct: 1366 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 1307

                                                                        
Query: 319  cgagtcgatgatgccagcgacagtgaagatccctccgactatagcacacaggtttgtcag 378
            |||||| |||||||| | ||| ||||| | |||||| ||||||||||| ||||| |||||
Sbjct: 1306 cgagtcaatgatgccggagacggtgaaaacccctcccactatagcacataggttcgtcag 1247

                                                                        
Query: 379  gtagtggaggaaggatctattctcctctgtaaatatcacctttatcggtgagaaatcata 438
             |||||||| | ||| ||||| || ||||||||||| |||||||| ||||||||||||||
Sbjct: 1246 atagtggagcagggaactattttcttctgtaaatattacctttatgggtgagaaatcata 1187

                                                                        
Query: 439  gaagaaaaatactccaggttggggtctcggttgaacatttccatctctaaagtgctccgt 498
            |||||||||||||||||| |||||| | ||  ||| ||| ||||||||||| ||||| ||
Sbjct: 1186 gaagaaaaatactccaggctggggtttggggcgaatattcccatctctaaaatgctctgt 1127

                                                                        
Query: 499  tactgagaattggtttgaatcgatcttgcgccctcttatatcattataaattgtagggac 558
            ||||||||||||||| ||||  |||||||||||||||| |||| | ||||||||||| ||
Sbjct: 1126 tactgagaattggttggaatgaatcttgcgccctcttagatcagtgtaaattgtaggaac 1067

                                                                        
Query: 559  aacttttatgaagtattggtatgtcccatctgaagcgggctgtgtccactgagcaccatc 618
            ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1066 aacttttatgaagtattggtatgtcccatctgatgctggttgtgtccactgagcaccatc 1007

                                                                        
Query: 619  aagtggattgacagcaccagggaattctgtcccaaaggacagtttgtttattttgtgggt 678
            ||||||||| ||| |||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct: 1006 aagtggattaacaacaccagggaattctgtcccaaaagacagtttatttattttgtgtgt 947

                       
Query: 679  aatattgaaac 689
             || |||||||
Sbjct: 946  gatgttgaaac 936
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>dbj|AK105601.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A06, full
            insert sequence
          Length = 1630

 Score =  450 bits (227), Expect = e-123
 Identities = 380/431 (88%)
 Strand = Plus / Minus

                                                                        
Query: 259  tcatctgtacttgcctatctccattttcttcttaagtgccttctgtccatggtatatgaa 318
            ||||||||||||||||| ||||||||| ||||| ||||||||||| || || ||||||||
Sbjct: 1354 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 1295

                                                                        
Query: 319  cgagtcgatgatgccagcgacagtgaagatccctccgactatagcacacaggtttgtcag 378
            |||||| |||||||| | ||| ||||| | |||||| ||||||||||| ||||| |||||
Sbjct: 1294 cgagtcaatgatgccggagacggtgaaaacccctcccactatagcacataggttcgtcag 1235

                                                                        
Query: 379  gtagtggaggaaggatctattctcctctgtaaatatcacctttatcggtgagaaatcata 438
             |||||||| | ||| ||||| || ||||||||||| |||||||| ||||||||||||||
Sbjct: 1234 atagtggagcagggaactattttcttctgtaaatattacctttatgggtgagaaatcata 1175

                                                                        
Query: 439  gaagaaaaatactccaggttggggtctcggttgaacatttccatctctaaagtgctccgt 498
            |||||||||||||||||| |||||| | ||  ||| ||| ||||||||||| ||||| ||
Sbjct: 1174 gaagaaaaatactccaggctggggtttggggcgaatattcccatctctaaaatgctctgt 1115

                                                                        
Query: 499  tactgagaattggtttgaatcgatcttgcgccctcttatatcattataaattgtagggac 558
            ||||||||||||||| ||||  |||||||||||||||| |||| | ||||||||||| ||
Sbjct: 1114 tactgagaattggttggaatgaatcttgcgccctcttagatcagtgtaaattgtaggaac 1055

                                                                        
Query: 559  aacttttatgaagtattggtatgtcccatctgaagcgggctgtgtccactgagcaccatc 618
            |||||||||||||| |||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1054 aacttttatgaagtgttggtatgtcccatctgatgctggttgtgtccactgagcaccatc 995

                                                                        
Query: 619  aagtggattgacagcaccagggaattctgtcccaaaggacagtttgtttattttgtgggt 678
            | ||||||| ||| |||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct: 994  aggtggattaacaacaccagggaattctgtcccaaaagacagtttatttattttgtgtgt 935

                       
Query: 679  aatattgaaac 689
             || |||||||
Sbjct: 934  gatgttgaaac 924
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>dbj|AK073984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072O04, full
            insert sequence
          Length = 3048

 Score =  329 bits (166), Expect = 7e-87
 Identities = 247/274 (90%)
 Strand = Plus / Minus

                                                                        
Query: 416  acctttatcggtgagaaatcatagaagaaaaatactccaggttggggtctcggttgaaca 475
            |||||||| |||||||||||||||||||||||||||||||| |||||| | ||  ||| |
Sbjct: 1685 acctttatgggtgagaaatcatagaagaaaaatactccaggctggggtttggggcgaata 1626

                                                                        
Query: 476  tttccatctctaaagtgctccgttactgagaattggtttgaatcgatcttgcgccctctt 535
            || ||||||||||| ||||| ||||||||||||||||| ||||  |||||||||||||||
Sbjct: 1625 ttcccatctctaaaatgctctgttactgagaattggttggaatgaatcttgcgccctctt 1566

                                                                        
Query: 536  atatcattataaattgtagggacaacttttatgaagtattggtatgtcccatctgaagcg 595
            | |||| | ||||||||||| ||||||||||||||||||||||||||||||||||| || 
Sbjct: 1565 agatcagtgtaaattgtaggaacaacttttatgaagtattggtatgtcccatctgatgct 1506

                                                                        
Query: 596  ggctgtgtccactgagcaccatcaagtggattgacagcaccagggaattctgtcccaaag 655
            || ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| 
Sbjct: 1505 ggttgtgtccactgagcaccatcaagtggattaacaacaccagggaattctgtcccaaaa 1446

                                              
Query: 656  gacagtttgtttattttgtgggtaatattgaaac 689
            |||||||| ||||||||||| || || |||||||
Sbjct: 1445 gacagtttatttattttgtgtgtgatgttgaaac 1412



 Score =  145 bits (73), Expect = 2e-31
 Identities = 139/161 (86%)
 Strand = Plus / Minus

                                                                        
Query: 259  tcatctgtacttgcctatctccattttcttcttaagtgccttctgtccatggtatatgaa 318
            ||||||||||||||||| ||||||||| ||||| ||||||||||| || || ||||||||
Sbjct: 2772 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 2713

                                                                        
Query: 319  cgagtcgatgatgccagcgacagtgaagatccctccgactatagcacacaggtttgtcag 378
            |||||| |||||||| | ||| ||||| | |||||| ||||||||||| ||||| |||||
Sbjct: 2712 cgagtcaatgatgccggagacggtgaaaacccctcccactatagcacataggttcgtcag 2653

                                                     
Query: 379  gtagtggaggaaggatctattctcctctgtaaatatcacct 419
             |||||||| | ||| ||||| || ||||||||||| ||||
Sbjct: 2652 atagtggagcagggaactattttcttctgtaaatattacct 2612
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>gb|AY112405.1| Zea mays CL10251_1 mRNA sequence
          Length = 565

 Score =  168 bits (85), Expect = 2e-38
 Identities = 145/165 (87%)
 Strand = Plus / Plus

                                                                       
Query: 259 tcatctgtacttgcctatctccattttcttcttaagtgccttctgtccatggtatatgaa 318
           ||||||||| || |||| ||||||||||||||| |||||||||||||| |||||||| ||
Sbjct: 398 tcatctgtatttacctagctccattttcttcttgagtgccttctgtccgtggtatataaa 457

                                                                       
Query: 319 cgagtcgatgatgccagcgacagtgaagatccctccgactatagcacacaggtttgtcag 378
           |||||||||||| || | ||||||||| |  ||||| ||||||||||| |||||||||||
Sbjct: 458 cgagtcgatgatacccgagacagtgaacacacctcccactatagcacaaaggtttgtcag 517

                                                        
Query: 379 gtagtggaggaaggatctattctcctctgtaaatatcacctttat 423
           ||||||||| | ||||||| | || ||||| ||||||||||||||
Sbjct: 518 gtagtggagtagggatctactttcttctgtgaatatcacctttat 562



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 210 cctccttacaagccacaaaacttggaaa 237
           |||||||||| |||||||||||||||||
Sbjct: 341 cctccttacatgccacaaaacttggaaa 368
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>dbj|AK071895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058G08, full
            insert sequence
          Length = 1536

 Score =  145 bits (73), Expect = 2e-31
 Identities = 139/161 (86%)
 Strand = Plus / Minus

                                                                        
Query: 259  tcatctgtacttgcctatctccattttcttcttaagtgccttctgtccatggtatatgaa 318
            ||||||||||||||||| ||||||||| ||||| ||||||||||| || || ||||||||
Sbjct: 1260 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 1201

                                                                        
Query: 319  cgagtcgatgatgccagcgacagtgaagatccctccgactatagcacacaggtttgtcag 378
            |||||| |||||||| | ||| ||||| | |||||| ||||||||||| ||||| |||||
Sbjct: 1200 cgagtcaatgatgccggagacggtgaaaacccctcccactatagcacataggttcgtcag 1141

                                                     
Query: 379  gtagtggaggaaggatctattctcctctgtaaatatcacct 419
             |||||||| | ||| ||||| || ||||||||||| ||||
Sbjct: 1140 atagtggagcagggaactattttcttctgtaaatattacct 1100



 Score =  103 bits (52), Expect = 8e-19
 Identities = 82/92 (89%)
 Strand = Plus / Minus

                                                                       
Query: 416 acctttatcggtgagaaatcatagaagaaaaatactccaggttggggtctcggttgaaca 475
           |||||||| |||||||||||||||||||||||||||||||| |||||| | ||  ||| |
Sbjct: 172 acctttatgggtgagaaatcatagaagaaaaatactccaggctggggtttggggcgaata 113

                                           
Query: 476 tttccatctctaaagtgctccgttactgagaa 507
           || ||||||||||| ||||| |||||||||||
Sbjct: 112 ttcccatctctaaaatgctctgttactgagaa 81
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>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0088I06, complete sequence
          Length = 187651

 Score =  103 bits (52), Expect = 8e-19
 Identities = 82/92 (89%)
 Strand = Plus / Minus

                                                                        
Query: 416  acctttatcggtgagaaatcatagaagaaaaatactccaggttggggtctcggttgaaca 475
            |||||||| |||||||||||||||||||||||||||||||| |||||| | ||  ||| |
Sbjct: 8418 acctttatgggtgagaaatcatagaagaaaaatactccaggctggggtttggggcgaata 8359

                                            
Query: 476  tttccatctctaaagtgctccgttactgagaa 507
            || ||||||||||| ||||| |||||||||||
Sbjct: 8358 ttcccatctctaaaatgctctgttactgagaa 8327



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                        
Query: 259  tcatctgtacttgcctatctccattttcttcttaagtgccttctgtccatggtatatgaa 318
            ||||||||||||||||| ||||||||| ||||| ||||||||||| || || ||||||||
Sbjct: 9798 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 9739

                           
Query: 319  cgagtcgatgatgcc 333
            |||||| ||||||||
Sbjct: 9738 cgagtcaatgatgcc 9724



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                        
Query: 614  ccatcaagtggattgacagcaccagggaattctgtcccaaaggacagtttgtttattttg 673
            |||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||
Sbjct: 7910 ccatcaagtggattaacaacaccagggaattctgtcccaaaagacagtttatttattttg 7851

              
Query: 674  tg 675
            ||
Sbjct: 7850 tg 7849



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                   
Query: 560  acttttatgaagtattggtatgtcccatctgaagcgggctgtgtccactgagcac 614
            |||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 8091 acttttatgaagtattggtatgtcccatctgatgctggttgtgtccactgagcac 8037



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                        
Query: 350  cctccgactatagcacacaggtttgtcaggtagtggaggaaggatctattctcctctgta 409
            ||||| ||||||||||| ||||| ||||| |||||||| | ||| ||||| || ||||||
Sbjct: 9415 cctcccactatagcacataggttcgtcagatagtggagcagggaactattttcttctgta 9356

                      
Query: 410  aatatcacct 419
            ||||| ||||
Sbjct: 9355 aatattacct 9346



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                  
Query: 508  ttggtttgaatcgatcttgcgccctcttatatcattataaattgtagggacaac 561
            |||||| ||||  |||||||||||||||| |||| | ||||||||||| |||||
Sbjct: 8244 ttggttggaatgaatcttgcgccctcttagatcagtgtaaattgtaggaacaac 8191
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  103 bits (52), Expect = 8e-19
 Identities = 82/92 (89%)
 Strand = Plus / Minus

                                                                            
Query: 416      acctttatcggtgagaaatcatagaagaaaaatactccaggttggggtctcggttgaaca 475
                |||||||| |||||||||||||||||||||||||||||||| |||||| | ||  ||| |
Sbjct: 23939929 acctttatgggtgagaaatcatagaagaaaaatactccaggctggggtttggggcgaata 23939870

                                                
Query: 476      tttccatctctaaagtgctccgttactgagaa 507
                || ||||||||||| ||||| |||||||||||
Sbjct: 23939869 ttcccatctctaaaatgctctgttactgagaa 23939838



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                            
Query: 259      tcatctgtacttgcctatctccattttcttcttaagtgccttctgtccatggtatatgaa 318
                ||||||||||||||||| ||||||||| ||||| ||||||||||| || || ||||||||
Sbjct: 23941309 tcatctgtacttgcctagctccatttttttcttgagtgccttctgcccgtgatatatgaa 23941250

                               
Query: 319      cgagtcgatgatgcc 333
                |||||| ||||||||
Sbjct: 23941249 cgagtcaatgatgcc 23941235



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                            
Query: 614      ccatcaagtggattgacagcaccagggaattctgtcccaaaggacagtttgtttattttg 673
                |||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||
Sbjct: 23939421 ccatcaagtggattaacaacaccagggaattctgtcccaaaagacagtttatttattttg 23939362

                  
Query: 674      tg 675
                ||
Sbjct: 23939361 tg 23939360



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                       
Query: 560      acttttatgaagtattggtatgtcccatctgaagcgggctgtgtccactgagcac 614
                |||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 23939602 acttttatgaagtattggtatgtcccatctgatgctggttgtgtccactgagcac 23939548



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                            
Query: 350      cctccgactatagcacacaggtttgtcaggtagtggaggaaggatctattctcctctgta 409
                ||||| ||||||||||| ||||| ||||| |||||||| | ||| ||||| || ||||||
Sbjct: 23940926 cctcccactatagcacataggttcgtcagatagtggagcagggaactattttcttctgta 23940867

                          
Query: 410      aatatcacct 419
                ||||| ||||
Sbjct: 23940866 aatattacct 23940857



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                      
Query: 508      ttggtttgaatcgatcttgcgccctcttatatcattataaattgtagggacaac 561
                |||||| ||||  |||||||||||||||| |||| | ||||||||||| |||||
Sbjct: 23939755 ttggttggaatgaatcttgcgccctcttagatcagtgtaaattgtaggaacaac 23939702
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                            
Query: 614      ccatcaagtggattgacagcaccagggaattctgtcccaaaggacagtttgtttattttg 673
                |||||||| ||||||||| ||||||||||||||  ||||||||| || |||||||| |||
Sbjct: 11596489 ccatcaagaggattgacaacaccagggaattctaccccaaaggaaagcttgtttatcttg 11596548

                  
Query: 674      tg 675
                ||
Sbjct: 11596549 tg 11596550
to top
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                          
Query: 614    ccatcaagtggattgacagcaccagggaattctgtcccaaaggacagtttgtttattttg 673
              |||||||| ||||||||| ||||||||||||||  ||||||||| || |||||||| |||
Sbjct: 147061 ccatcaagaggattgacaacaccagggaattctaccccaaaggaaagcttgtttatcttg 147120

                
Query: 674    tg 675
              ||
Sbjct: 147121 tg 147122
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                            
Query: 614      ccatcaagtggattgacagcaccagggaattctgtcccaaaggacagtttgtttattttg 673
                |||||||| ||||||||| ||||||||||||||  ||||||||| || |||||||| |||
Sbjct: 11593252 ccatcaagaggattgacaacaccagggaattctaccccaaaggaaagcttgtttatcttg 11593311

                  
Query: 674      tg 675
                ||
Sbjct: 11593312 tg 11593313
to top
>dbj|AK059138.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-H09, full
           insert sequence
          Length = 518

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 326 atgatgccagcgacagtgaagatccctccgactatagcacacaggtttgtcaggtagtg 384
           ||||||||||| |||||||| |||||||| || |||||||| | |||||||||| ||||
Sbjct: 186 atgatgccagcaacagtgaaaatccctccaacaatagcacatatgtttgtcaggaagtg 128
to top
>ref|NM_102070.2| Arabidopsis thaliana unknown protein AT1G22200 transcript variant
            AT1G22200.1 mRNA, complete cds
          Length = 1576

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 275  atctccattttcttcttaagtgccttctgtccatggtatatgaacga 321
            ||||||||||||||||||| |||    ||||||||||||||||||||
Sbjct: 1302 atctccattttcttcttaattgctcgttgtccatggtatatgaacga 1256
to top
>ref|NM_001036000.1| Arabidopsis thaliana unknown protein AT1G22200 transcript variant
            AT1G22200.2 mRNA, complete cds
          Length = 1617

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 275  atctccattttcttcttaagtgccttctgtccatggtatatgaacga 321
            ||||||||||||||||||| |||    ||||||||||||||||||||
Sbjct: 1335 atctccattttcttcttaattgctcgttgtccatggtatatgaacga 1289
to top
>gb|AY113908.1| Arabidopsis thaliana unknown protein (At1g22200) mRNA, complete cds
          Length = 1192

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 275  atctccattttcttcttaagtgccttctgtccatggtatatgaacga 321
            ||||||||||||||||||| |||    ||||||||||||||||||||
Sbjct: 1145 atctccattttcttcttaattgctcgttgtccatggtatatgaacga 1099
to top
>gb|AF370338.1| Arabidopsis thaliana unknown protein (At1g22200) mRNA, complete cds
          Length = 1522

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 275  atctccattttcttcttaagtgccttctgtccatggtatatgaacga 321
            ||||||||||||||||||| |||    ||||||||||||||||||||
Sbjct: 1302 atctccattttcttcttaattgctcgttgtccatggtatatgaacga 1256
to top
>gb|AY085626.1| Arabidopsis thaliana clone 16380 mRNA, complete sequence
          Length = 1540

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 275  atctccattttcttcttaagtgccttctgtccatggtatatgaacga 321
            ||||||||||||||||||| |||    ||||||||||||||||||||
Sbjct: 1285 atctccattttcttcttaattgctcgttgtccatggtatatgaacga 1239
to top
>gb|AC073942.2|F16L1 Sequence of BAC F16L1 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 36030

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 275   atctccattttcttcttaagtgccttctgtccatggtatatgaacga 321
             ||||||||||||||||||| |||    ||||||||||||||||||||
Sbjct: 22411 atctccattttcttcttaattgctcgttgtccatggtatatgaacga 22365
to top
>gb|AY112254.1| Zea mays CL9004_1 mRNA sequence
          Length = 649

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 124/154 (80%), Gaps = 2/154 (1%)
 Strand = Plus / Plus

                                                                       
Query: 305 ccatggtatatgaacgagtcgatgatgccagcgacagtgaagatccctccgactatagca 364
           |||||||| | ||| || || ||||||||||| || |||||||| ||||| || ||||||
Sbjct: 229 ccatggtacacgaaagaatctatgatgccagcaaccgtgaagatacctccaacaatagca 288

                                                                       
Query: 365 cacaggtttgtcaggtagtggaggaaggatctattctcctctgtaaatatc-acctttat 423
           || | ||| |||||| |||| ||||  ||  |||| ||||| ||||| ||| ||||| ||
Sbjct: 289 catatgttcgtcaggaagtgaaggagcgacgtattttcctcagtaaa-atcaaccttgat 347

                                             
Query: 424 cggtgagaaatcatagaagaaaaatactccaggt 457
            ||||| || || ||||||||| |||| ||||||
Sbjct: 348 tggtgaaaattcgtagaagaaatatacaccaggt 381



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 614 ccatcaagtggattgacagcaccagggaattctgtcccaaaggacagtttgtttat 669
           |||||||| ||||||||  |||| ||||| |||  |||||||||||| || |||||
Sbjct: 547 ccatcaagaggattgactacacctgggaactcttccccaaaggacagcttatttat 602
to top
>gb|AC113287.8| Mus musculus chromosome 3, clone RP23-412L13, complete sequence
          Length = 214444

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 426   gtgagaaatcatagaagaaaaata 449
             ||||||||||||||||||||||||
Sbjct: 82145 gtgagaaatcatagaagaaaaata 82168
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>emb|AL645862.14| Mouse DNA sequence from clone RP23-223A11 on chromosome 11, complete
             sequence
          Length = 176011

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 75    atgaaagcacttgcccccaagac 97
             |||||||||||||||||||||||
Sbjct: 64927 atgaaagcacttgcccccaagac 64949
to top
>gb|AC007571.6| Drosophila melanogaster, chromosome 3R, region 85A1-85A10, BAC clone
             BACR48A14, complete sequence
          Length = 188337

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 101   gcctattctgttttcctttttt 122
             ||||||||||||||||||||||
Sbjct: 76680 gcctattctgttttcctttttt 76701
to top
>gb|AE003679.2| Drosophila melanogaster chromosome 3R, section 17 of 118 of the complete
              sequence
          Length = 216994

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 101    gcctattctgttttcctttttt 122
              ||||||||||||||||||||||
Sbjct: 150850 gcctattctgttttcctttttt 150829
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>ref|NM_103301.2| Arabidopsis thaliana unknown protein AT1G36050 mRNA, complete cds
          Length = 1611

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 401  tcctctgtaaatatcacctttatcggtgagaaatcatagaagaaaaatactccaggt 457
            ||||| |||||| | ||||| || || |||| |||||||||||| || |||||||||
Sbjct: 1282 tcctccgtaaatgttaccttgattggagagagatcatagaagaagaaaactccaggt 1226
to top
>emb|BX510307.21| Zebrafish DNA sequence from clone DKEY-9F17 in linkage group 5,
             complete sequence
          Length = 102019

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   cttttttacaagttttcatca 136
             |||||||||||||||||||||
Sbjct: 99832 cttttttacaagttttcatca 99812
to top
>ref|XM_847798.1| PREDICTED: Canis familiaris similar to ER-Golgi intermediate
           compartment 32 kDa protein (ERGIC-32), transcript
           variant 1 (LOC609628), mRNA
          Length = 939

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 328 gatgccagcgacagtgaagatccctccga 356
           ||||||||||||||||||| |||| ||||
Sbjct: 873 gatgccagcgacagtgaaggtcccaccga 845
to top
>ref|XM_861389.1| PREDICTED: Canis familiaris similar to ER-Golgi intermediate
           compartment 32 kDa protein (ERGIC-32), transcript
           variant 2 (LOC609628), mRNA
          Length = 836

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 328 gatgccagcgacagtgaagatccctccga 356
           ||||||||||||||||||| |||| ||||
Sbjct: 770 gatgccagcgacagtgaaggtcccaccga 742
to top
>emb|BX815508.1|CNS0ABCC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS68ZG09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1473

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 401  tcctctgtaaatatcacctttatcggtgagaaatcatagaagaaaaatactccaggt 457
            ||||| |||||| | ||||| || || |||| |||||||||||| || |||||||||
Sbjct: 1251 tcctccgtaaatgttaccttgattggagagagatcatagaagaagaaaactccaggt 1195
to top
>emb|BX818235.1|CNS0AB0A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL69ZB02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 562

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 401 tcctctgtaaatatcacctttatcggtgagaaatcatagaagaaaaatactccaggt 457
           ||||| |||||| | ||||| || || |||| |||||||||||| || |||||||||
Sbjct: 267 tcctccgtaaatgttaccttgattggagagagatcatagaagaagaaaactccaggt 211
to top
>gb|BT003147.1| Arabidopsis thaliana At1g36050 mRNA, complete cds
          Length = 1161

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 401  tcctctgtaaatatcacctttatcggtgagaaatcatagaagaaaaatactccaggt 457
            ||||| |||||| | ||||| || || |||| |||||||||||| || |||||||||
Sbjct: 1019 tcctccgtaaatgttaccttgattggagagagatcatagaagaagaaaactccaggt 963
to top
>gb|U61950.2| Caenorhabditis elegans cosmid C45E5, complete sequence
          Length = 27188

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   tctgttttccttttttacaa 126
             ||||||||||||||||||||
Sbjct: 25156 tctgttttccttttttacaa 25137
to top
>ref|XM_454618.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E14872g predicted mRNA
          Length = 2034

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  tttgtcaggtagtggaggaa 390
            ||||||||||||||||||||
Sbjct: 1440 tttgtcaggtagtggaggaa 1421
to top
>gb|AC110883.12| Mus musculus chromosome 8, clone RP23-200N24, complete sequence
          Length = 293104

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 431   aaatcatagaagaaaaatactcca 454
             |||||||||||||||| |||||||
Sbjct: 14058 aaatcatagaagaaaactactcca 14035
to top
>gb|AC118545.20| Mus musculus strain C57BL/6J clone rp23-324o14 map 17, complete
             sequence
          Length = 236365

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 227   aaacttggaaaatgttaggtgtgg 250
             ||||||||||||| ||||||||||
Sbjct: 23124 aaacttggaaaatattaggtgtgg 23101
to top
>emb|CT010495.9| Mouse DNA sequence from clone RP23-226G14 on chromosome 17, complete
              sequence
          Length = 202526

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 431    aaatcatagaagaaaaatac 450
              ||||||||||||||||||||
Sbjct: 117649 aaatcatagaagaaaaatac 117630
to top
>emb|BX547934.18| Zebrafish DNA sequence from clone DKEY-161J23 in linkage group 24,
             complete sequence
          Length = 174457

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 600   gtgtccactgagcaccatca 619
             ||||||||||||||||||||
Sbjct: 18147 gtgtccactgagcaccatca 18128
to top
>gb|AC122514.4| Mus musculus BAC clone RP24-455L10 from chromosome 8, complete sequence
          Length = 171839

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 431    aaatcatagaagaaaaatactcca 454
              |||||||||||||||| |||||||
Sbjct: 166692 aaatcatagaagaaaactactcca 166669
to top
>gb|AC092167.2| Homo sapiens BAC clone RP11-765N2 from 7, complete sequence
          Length = 103930

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   atcatagaagaaaaatactc 452
             ||||||||||||||||||||
Sbjct: 51980 atcatagaagaaaaatactc 51999
to top
>gb|U41008.1| Caenorhabditis elegans cosmid F44E8, complete sequence
          Length = 26465

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 107  tctgttttccttttttacaa 126
            ||||||||||||||||||||
Sbjct: 7568 tctgttttccttttttacaa 7549
to top
>emb|AL596245.3| Human DNA sequence from clone RP11-573C10 on chromosome X, complete
            sequence
          Length = 175618

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  gagaaatcatagaagaaaaa 447
            ||||||||||||||||||||
Sbjct: 6727 gagaaatcatagaagaaaaa 6746
to top
>emb|AL513342.7| Human DNA sequence from clone RP11-96F14 on chromosome 1 Contains part of
              the FMN2 gene for formin 2, complete sequence
          Length = 127208

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 281    attttcttcttaagtgccttctgt 304
              |||||||||||||||| |||||||
Sbjct: 101723 attttcttcttaagtgtcttctgt 101700
to top
>emb|AL139374.18| Human DNA sequence from clone RP11-118F16 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 53536

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   tttccttttttacaagtttt 131
             ||||||||||||||||||||
Sbjct: 49536 tttccttttttacaagtttt 49555
to top
>emb|AL035448.29|HS742J24 Human DNA sequence from clone RP4-742J24 on chromosome 20p11.23-12.3
             Contains the BTBD3 gene for BTB (POZ) domain containing 3
             (KIAA0952), a novel gene and a CpG island, complete
             sequence
          Length = 167075

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 385   gaggaaggatctattctcctctgt 408
             |||||||||||| |||||||||||
Sbjct: 49223 gaggaaggatcttttctcctctgt 49246
to top
>emb|AL031733.3|HS455J7 Human DNA sequence from clone RP3-455J7 on chromosome 1q24 Contains the
             5' end of the CD3Z gene for CD3Z antigen zeta polypeptide
             (TiT3 complex), an aldo-keto reductase family 1 member D1
             (delta 4-3-ketosteroid-5-beta-reductase) (AKR1D1)
             pseudogene, the CREG gene for cellular repressor of
             E1A-stimulated genes, a ribosomal protein S18 (RPS18)
             pseudogene, a novel gene, the 5' end of the gene for a
             novel protein and a CpG island, complete sequence
          Length = 215861

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    ttgcccccaagacccagcct 104
             ||||||||||||||||||||
Sbjct: 55154 ttgcccccaagacccagcct 55173
to top
>ref|XM_782112.1| PREDICTED: Strongylocentrotus purpuratus similar to CG13409-PA
           (LOC582145), mRNA
          Length = 1401

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 158 ttttcatggccttcggcatctcgt 181
           |||||||||| |||||||||||||
Sbjct: 74  ttttcatggctttcggcatctcgt 97
to top
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2234072

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 371     tttgtcaggtagtggaggaa 390
               ||||||||||||||||||||
Sbjct: 1327773 tttgtcaggtagtggaggaa 1327754
to top
>emb|AL954167.4| Mouse DNA sequence from clone RP23-300M3 on chromosome 11 Contains a zinc
              finger protein pseudogene, complete sequence
          Length = 190351

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     aactaatctctacccatgga 73
              ||||||||||||||||||||
Sbjct: 123346 aactaatctctacccatgga 123327
to top
>emb|BX510646.5| Zebrafish DNA sequence from clone CH211-221B16 in linkage group 9,
              complete sequence
          Length = 200321

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 665    tttattttgtgggtaatatt 684
              ||||||||||||||||||||
Sbjct: 161439 tttattttgtgggtaatatt 161420
to top
>emb|BX936309.9| Zebrafish DNA sequence from clone CH211-214N2 in linkage group 13,
             complete sequence
          Length = 63164

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   acatttccatctctaaagtg 492
             ||||||||||||||||||||
Sbjct: 14942 acatttccatctctaaagtg 14923
to top
>gb|AC063962.11| Homo sapiens chromosome 10 clone RP11-222G7, complete sequence
          Length = 171818

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 215   ttacaagccacaaaacttggaaaa 238
             |||||||| |||||||||||||||
Sbjct: 49494 ttacaagcaacaaaacttggaaaa 49517
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>gb|AC018511.5| Homo sapiens chromosome 10 clone RP11-77G23, complete sequence
          Length = 159519

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 215   ttacaagccacaaaacttggaaaa 238
             |||||||| |||||||||||||||
Sbjct: 22498 ttacaagcaacaaaacttggaaaa 22475
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>gb|AC104701.5| Homo sapiens BAC clone RP11-772N1 from 4, complete sequence
          Length = 152547

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   atagaagaaaaatactccag 455
             ||||||||||||||||||||
Sbjct: 61308 atagaagaaaaatactccag 61327
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>gb|AC024474.8| Homo sapiens chromosome 15, clone RP11-686I6, complete sequence
          Length = 194973

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 214   cttacaagccacaaaacttggaaa 237
             ||||| ||||||||||||||||||
Sbjct: 57742 cttaccagccacaaaacttggaaa 57765
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>gb|AC006228.5|AC006228 Genomic sequence for Arabidopsis thaliana BAC F5J5, complete sequence
          Length = 104806

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 414   tcacctttatcggtgagaaatcatagaagaaaaatactccaggt 457
             ||||||| || || |||| |||||||||||| || |||||||||
Sbjct: 13475 tcaccttgattggagagagatcatagaagaagaaaactccaggt 13432
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>gb|AC021666.5|AC021666 Arabidopsis thaliana chromosome 1 BAC T22A15 genomic sequence, complete
             sequence
          Length = 93859

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 414   tcacctttatcggtgagaaatcatagaagaaaaatactccaggt 457
             ||||||| || || |||| |||||||||||| || |||||||||
Sbjct: 22234 tcaccttgattggagagagatcatagaagaagaaaactccaggt 22277
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>gb|AC067719.12| Homo sapiens 3 BAC RP11-183L23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 172945

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 215   ttacaagccacaaaacttggaaaa 238
             |||||||| |||||||||||||||
Sbjct: 28899 ttacaagctacaaaacttggaaaa 28922
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>gb|AF279923.1|AF279923 Pan troglodytes isolate PANC dystrophin (DMD) gene, intron 7,
           partial sequence
          Length = 1007

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 425 ggtgagaaatcatagaagaa 444
           ||||||||||||||||||||
Sbjct: 798 ggtgagaaatcatagaagaa 779
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>dbj|AK173193.1| Mus musculus mRNA for mKIAA1529 protein
          Length = 7252

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 429  agaaatcatagaagaaaaat 448
            ||||||||||||||||||||
Sbjct: 4421 agaaatcatagaagaaaaat 4402
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>emb|AJ329714.1|HSA329714 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-QI23C
          Length = 688

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 294 gtgccttctgtccatggtat 313
           ||||||||||||||||||||
Sbjct: 55  gtgccttctgtccatggtat 74
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>gb|AC154423.2| Mus musculus BAC clone RP24-221B7 from 17, complete sequence
          Length = 172011

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    aaatcatagaagaaaaatac 450
              ||||||||||||||||||||
Sbjct: 109215 aaatcatagaagaaaaatac 109234
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>gb|AC091777.26| Mus musculus strain C57BL/6J chromosome 17 clone rp23-355b17, complete
              sequence
          Length = 216109

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 227    aaacttggaaaatgttaggtgtgg 250
              ||||||||||||| ||||||||||
Sbjct: 124496 aaacttggaaaatattaggtgtgg 124473
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>gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, complete sequence
          Length = 166914

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 214  cttacaagccacaaaacttggaaa 237
            ||||| ||||||||||||||||||
Sbjct: 8059 cttaccagccacaaaacttggaaa 8082
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>emb|AL672180.11| Mouse DNA sequence from clone RP23-419G22 on chromosome X, complete
              sequence
          Length = 212659

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    ctattctgttttcctttttt 122
              ||||||||||||||||||||
Sbjct: 166293 ctattctgttttcctttttt 166312
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>emb|AL772381.5| Mouse DNA sequence from clone RP23-358I3 on chromosome 4, complete
              sequence
          Length = 199350

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    agaaatcatagaagaaaaat 448
              ||||||||||||||||||||
Sbjct: 108438 agaaatcatagaagaaaaat 108419
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>emb|AL807233.10| Mouse DNA sequence from clone RP23-174O19 on chromosome X, complete
              sequence
          Length = 195054

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    ctgtaaatatcacctttatc 424
              ||||||||||||||||||||
Sbjct: 112301 ctgtaaatatcacctttatc 112282
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>gb|AC087859.3| Homo sapiens chromosome 3 clone RP11-34L16 map 3p, complete sequence
          Length = 151927

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 641   aattctgtcccaaaggacag 660
             ||||||||||||||||||||
Sbjct: 42174 aattctgtcccaaaggacag 42193
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>gb|AC091404.2| Sus scrofa clone RP44-74O11, complete sequence
          Length = 102386

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   agaaatcatagaagaaaaat 448
             ||||||||||||||||||||
Sbjct: 63018 agaaatcatagaagaaaaat 63037


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,324,407
Number of Sequences: 3902068
Number of extensions: 7324407
Number of successful extensions: 156509
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 156208
Number of HSP's gapped (non-prelim): 295
length of query: 689
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 666
effective length of database: 17,143,297,704
effective search space: 11417436270864
effective search space used: 11417436270864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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