Clone Name	rbasdm20
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	496	e-137
2	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	496	e-137
3	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	496	e-137
4	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	416	e-113
5	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	329	5e-87
6	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	293	3e-76
7	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	289	4e-75
8	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	281	1e-72
9	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	281	1e-72
10	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	281	1e-72
11	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	281	1e-72
12	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	281	1e-72
13	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	281	1e-72
14	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	281	1e-72
15	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	281	1e-72
16	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	281	1e-72
17	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	281	1e-72
18	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	281	1e-72
19	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	281	1e-72
20	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	280	4e-72
21	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	280	4e-72
22	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	276	6e-71
23	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	272	9e-70
24	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	272	9e-70
25	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	266	6e-68
26	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	266	6e-68
27	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	258	1e-65
28	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	254	2e-64
29	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	246	5e-62
30	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	246	5e-62
31	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	246	5e-62
32	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	246	5e-62
33	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	246	5e-62
34	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	246	5e-62
35	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	246	5e-62
36	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	246	5e-62
37	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	240	3e-60
38	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	238	1e-59
39	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	238	1e-59
40	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	238	1e-59
41	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	238	1e-59
42	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	238	1e-59
43	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	238	1e-59
44	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	238	1e-59
45	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	238	1e-59
46	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	236	5e-59
47	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	234	2e-58
48	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	234	2e-58
49	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	234	2e-58
50	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	234	2e-58
51	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	234	2e-58
52	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	234	2e-58
53	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	234	2e-58
54	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	234	2e-58
55	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	234	2e-58
56	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	234	2e-58
57	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	234	2e-58
58	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	226	5e-56
59	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	226	5e-56
60	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	222	8e-55
61	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	220	3e-54
62	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	218	1e-53
63	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	216	5e-53
64	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	202	7e-49
65	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	196	4e-47
66	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	196	4e-47
67	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	192	7e-46
68	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	188	1e-44
69	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	188	1e-44
70	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	174	2e-40
71	gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi...	170	3e-39
72	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	163	6e-37
73	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	161	2e-36
74	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	151	2e-33
75	emb|Y10657.1|CLRCAGENE C.littorale rca gene	147	4e-32
76	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	145	1e-31
77	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	143	6e-31
78	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	143	6e-31
79	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	141	2e-30
80	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	141	2e-30
81	gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence	133	6e-28
82	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	119	8e-24
83	gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplas...	119	8e-24
84	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	119	8e-24
85	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	103	5e-19
86	gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tet...	100	8e-18
87	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	96	1e-16
88	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	92	2e-15
89	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	88	3e-14
90	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	86	1e-13
91	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	78	3e-11
92	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
93	dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D...	76	1e-10
94	ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G7...	56	1e-04
95	gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	1e-04
96	gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	1e-04
97	emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Co...	56	1e-04
98	gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic s...	56	1e-04
99	dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown ...	56	1e-04
100	gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N...	56	1e-04
101	emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Co...	54	4e-04
102	gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se...	50	0.006
103	gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se...	50	0.006
104	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.6
105	emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Co...	42	1.6
106	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	42	1.6
107	emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa...	42	1.6
108	gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complet...	40	6.2
109	gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete...	40	6.2
110	gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, comp...	40	6.2
111	gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, secti...	40	6.2
112	dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138	40	6.2
113	emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ...	40	6.2
114	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	40	6.2
115	ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like f...	40	6.2
116	ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like f...	40	6.2
117	gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence	40	6.2
118	gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein p...	40	6.2
119	gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone...	40	6.2

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  496 bits (250), Expect = e-137
 Identities = 258/261 (98%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6805 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 6746

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6745 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 6686

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6685 cacgggggttctccctcttgttgtacatgccagggagctgcacgttggtgggggcatcgg 6626

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6625 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 6566

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| ||||||||||||||||
Sbjct: 6565 ccatcctacccgcaccagcgt 6545



 Score =  355 bits (179), Expect = 8e-95
 Identities = 185/188 (98%)
 Strand = Plus / Minus

                                                                        
Query: 15   atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttaggtaggtaaa 74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7726 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttaggtaggtaaa 7667

                                                                        
Query: 75   acatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcc 134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7666 acatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcc 7607

                                                                        
Query: 135  ttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacggncnnag 194
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||
Sbjct: 7606 ttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaag 7547

                    
Query: 195  taccttgc 202
            ||||||||
Sbjct: 7546 taccttgc 7539



 Score =  293 bits (148), Expect = 3e-76
 Identities = 220/244 (90%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            ||||||| || ||||| ||||| || |||||||| |||||||||||||||||||| || |
Sbjct: 3678 ccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcc 3619

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            | ||||||||||| |||||||| ||||||||||| ||||| |||||||||| ||||||||
Sbjct: 3618 cgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggca 3559

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            | |||||||||||||||||||||||||| || |||||||||||||||||||| || || |
Sbjct: 3558 cgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccg 3499

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            ||||||||||||||||||||||||||||||||||||| || ||||||||||| || ||||
Sbjct: 3498 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgcgtcgtcccgc 3439

                
Query: 437  ccat 440
            ||||
Sbjct: 3438 ccat 3435

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  496 bits (250), Expect = e-137
 Identities = 258/261 (98%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 1004

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 944

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943  cacgggggttctccctcttgttgtacatgccagggagctgcacgttggtgggggcatcgg 884

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 824

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| ||||||||||||||||
Sbjct: 823  ccatcctacccgcaccagcgt 803



 Score =  313 bits (158), Expect = 3e-82
 Identities = 185/191 (96%), Gaps = 3/191 (1%)
 Strand = Plus / Minus

                                                                        
Query: 15   atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttag-gtaggtaa 73
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1675 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttagtgtaggtaa 1616

                                                                        
Query: 74   aacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgt-cgtcgct 132
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1615 aacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgttcgtcgct 1556

                                                                        
Query: 133  ccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggca-cggncn 191
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | 
Sbjct: 1555 ccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcatcgggca 1496

                       
Query: 192  nagtaccttgc 202
             ||||||||||
Sbjct: 1495 aagtaccttgc 1485

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  496 bits (250), Expect = e-137
 Identities = 258/261 (98%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 749

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 689

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 cacgggggttctccctcttgttgtacatgccagggagctgcacgttggtgggggcatcgg 629

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 569

                                
Query: 437 ccatnctacccgcaccagcgt 457
           |||| ||||||||||||||||
Sbjct: 568 ccatcctacccgcaccagcgt 548



 Score =  355 bits (179), Expect = 8e-95
 Identities = 185/188 (98%)
 Strand = Plus / Minus

                                                                        
Query: 15   atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttaggtaggtaaa 74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1366 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttaggtaggtaaa 1307

                                                                        
Query: 75   acatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcc 134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 acatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcc 1247

                                                                        
Query: 135  ttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacggncnnag 194
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||
Sbjct: 1246 ttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaag 1187

                    
Query: 195  taccttgc 202
            ||||||||
Sbjct: 1186 taccttgc 1179

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  416 bits (210), Expect = e-113
 Identities = 248/261 (95%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 983 ccttgcagacaccgatacggtcgtcgcgggtgggagcccagtagaacttctccatacgac 924

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           |||||||||||||||| ||||| | |||||||||||||||||| ||||||||||||||||
Sbjct: 923 catcacggatcagaggggcgtacaacgtcgagaaatcgttaccagtgacgacgatgggca 864

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 863 cacgtgggttctcctccttgttgtacatgcctgggagctgcacattggtgggggcatcgg 804

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 803 cgatgttcatgagggtggcgttcaccatctggttgttgacggtgtactgtgtggtcccgc 744

                                
Query: 437 ccatnctacccgcaccagcgt 457
           |||| ||||||||||| ||||
Sbjct: 743 ccatcctacccgcaccggcgt 723



 Score =  208 bits (105), Expect = 1e-50
 Identities = 173/194 (89%), Gaps = 7/194 (3%)
 Strand = Plus / Minus

                                                                        
Query: 15   atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 68
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 1596 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 1537

                                                                        
Query: 69   ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 128
            | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 1536 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 1478

                                                                        
Query: 129  cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 188
            | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 1477 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 1418

                          
Query: 189  ncnnagtaccttgc 202
             |  ||||||||||
Sbjct: 1417 gcaaagtaccttgc 1404

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  329 bits (166), Expect = 5e-87
 Identities = 231/253 (91%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||
Sbjct: 994 ccttgcagacgccgatacggtcctcgcgggtgggcgcccagtagaacttctccatacgac 935

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||||||||| ||||| |||||||||| |||||| |
Sbjct: 934 cgtcacggatgaggggcgcgtacagcgtcgagaagtcgttgccggtgacgatgatgggga 875

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||||||||||||||||||||||||||| || |||||||||||||||||||| || ||||
Sbjct: 874 cacgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtcgg 815

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 814 cgatgttcatcagggtggcgttcaccatctggttgttcacggtgtactgggtggtcccgc 755

                        
Query: 437 ccatnctacccgc 449
           |||| | ||||||
Sbjct: 754 ccatccgacccgc 742



 Score =  145 bits (73), Expect = 1e-31
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                        
Query: 29   catgcccagcaatcgcttggatgcgatgcgga-cttaggtag-----gtaaaacatcaga 82
            ||||||||||| ||||||| |||||||||||  ||||||||      || ||||||||||
Sbjct: 1593 catgcccagcagtcgcttgtatgcgatgcggtgcttaggtacaaagagtgaaacatcaga 1534

                                                                        
Query: 83   -tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgt 141
             || | |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1533 ataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggt 1474

                                                         
Query: 142  tgggtcgtagttcttggcattttggtcggtgcaaccttccggcac 186
            ||||||| ||||||||||||   ||||||| ||||||||||||||
Sbjct: 1473 tgggtcgaagttcttggcatcccggtcggtacaaccttccggcac 1429

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  293 bits (148), Expect = 3e-76
 Identities = 220/244 (90%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            ||||||| || ||||| ||||| || |||||||| |||||||||||||||||||| || |
Sbjct: 1109 ccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcc 1050

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            | ||||||||||| |||||||| ||||||||||| ||||| |||||||||| ||||||||
Sbjct: 1049 cgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggca 990

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            | |||||||||||||||||||||||||| || |||||||||||||||||||| || || |
Sbjct: 989  cgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccg 930

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            ||||||||||||||||||||||||||||||||||||| || ||||||||||| || ||||
Sbjct: 929  cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgcgtcgtcccgc 870

                
Query: 437  ccat 440
            ||||
Sbjct: 869  ccat 866

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
           insert sequence
          Length = 1691

 Score =  289 bits (146), Expect = 4e-75
 Identities = 232/261 (88%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 987 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 928

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 927 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 868

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||||||||| ||||||||||||||||| |||||||||||||||||||| |||   ||||
Sbjct: 867 cacgggggttgtcctccttgttgtacatcccagggagctgcacgttggttgggttgtcgg 808

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 807 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 748

                                
Query: 437 ccatnctacccgcaccagcgt 457
           |||| | ||| ||||| ||||
Sbjct: 747 ccatgcgacctgcacccgcgt 727



 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                        
Query: 97   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492

                                          
Query: 157  ggcattttggtcggtgcaaccttccggcac 186
            ||||    ||||||||||||||||||||||
Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcac 1462

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  281 bits (142), Expect = 1e-72
 Identities = 231/261 (88%)
 Strand = Plus / Plus

                                                                          
Query: 197    ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
              |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 108761 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 108820

                                                                          
Query: 257    catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
              | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 108821 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 108880

                                                                          
Query: 317    cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
              |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 108881 cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 108940

                                                                          
Query: 377    cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
              ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 108941 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 109000

                                   
Query: 437    ccatnctacccgcaccagcgt 457
              |||| | ||| ||||| ||||
Sbjct: 109001 ccatgcgacctgcacccgcgt 109021



 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Plus

                                                                          
Query: 97     tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
              ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217

                                            
Query: 157    ggcattttggtcggtgcaaccttccggcac 186
              ||||    ||||||||||||||||||||||
Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcac 107247



 Score =  109 bits (55), Expect = 8e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                          
Query: 336    gttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggtggc 395
              ||||||||| || |||||||||||||||||||||   || |||||||||||||| || ||
Sbjct: 112577 gttgtacatccctgggagctgcacgttggtggggttgtccgcgatgttcatcagcgtcgc 112636

                                                         
Query: 396    gttcaccatctggttgttgacggtgtactgcgtggttccgccc 438
              |||||||||||||||||| || ||||||||||| || ||||||
Sbjct: 112637 gttcaccatctggttgttcaccgtgtactgcgtcgtgccgccc 112679



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 115    gcagctgccgtcgtcgctccttgccgttgggtcgtagtt 153
              ||||||||||||||||||||| || || |||||||||||
Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagtt 112091



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 214    cggtcgtcacgggtgggagcccagtagaacttctccat 251
              ||||| || ||||||||||||||||||||||| |||||
Sbjct: 112482 cggtcctcgcgggtgggagcccagtagaacttgtccat 112519

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  281 bits (142), Expect = 1e-72
 Identities = 231/261 (88%)
 Strand = Plus / Plus

                                                                         
Query: 197   ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
             |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 30638 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 30697

                                                                         
Query: 257   catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
             | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 30698 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 30757

                                                                         
Query: 317   cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
             |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 30758 cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 30817

                                                                         
Query: 377   cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
             ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 30818 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 30877

                                  
Query: 437   ccatnctacccgcaccagcgt 457
             |||| | ||| ||||| ||||
Sbjct: 30878 ccatgcgacctgcacccgcgt 30898



 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Plus

                                                                         
Query: 97    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
             ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098

                                           
Query: 157   ggcattttggtcggtgcaaccttccggcac 186
             ||||    ||||||||||||||||||||||
Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcac 29128



 Score =  109 bits (55), Expect = 8e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                         
Query: 336   gttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggtggc 395
             ||||||||| || |||||||||||||||||||||   || |||||||||||||| || ||
Sbjct: 34454 gttgtacatccctgggagctgcacgttggtggggttgtccgcgatgttcatcagcgtcgc 34513

                                                        
Query: 396   gttcaccatctggttgttgacggtgtactgcgtggttccgccc 438
             |||||||||||||||||| || ||||||||||| || ||||||
Sbjct: 34514 gttcaccatctggttgttcaccgtgtactgcgtcgtgccgccc 34556



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 115   gcagctgccgtcgtcgctccttgccgttgggtcgtagtt 153
             ||||||||||||||||||||| || || |||||||||||
Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagtt 33968



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 214   cggtcgtcacgggtgggagcccagtagaacttctccat 251
             ||||| || ||||||||||||||||||||||| |||||
Sbjct: 34359 cggtcctcgcgggtgggagcccagtagaacttgtccat 34396

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase (rca) mRNA, complete cds
          Length = 1675

 Score =  281 bits (142), Expect = 1e-72
 Identities = 231/261 (88%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 956 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 897

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 896 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 837

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 836 cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 777

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 776 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 717

                                
Query: 437 ccatnctacccgcaccagcgt 457
           |||| | ||| ||||| ||||
Sbjct: 716 ccatgcgacctgcacccgcgt 696



 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                        
Query: 97   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461

                                          
Query: 157  ggcattttggtcggtgcaaccttccggcac 186
            ||||    ||||||||||||||||||||||
Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcac 1431

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for
           ribulose-bisphosphate carboxylase activase large isoform
           precursor protein, complete cds, clone: 13YPR038
          Length = 1558

 Score =  281 bits (142), Expect = 1e-72
 Identities = 231/261 (88%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 951 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 892

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 891 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 832

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 831 cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 772

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 771 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 712

                                
Query: 437 ccatnctacccgcaccagcgt 457
           |||| | ||| ||||| ||||
Sbjct: 711 ccatgcgacctgcacccgcgt 691



 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                        
Query: 97   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371

                                          
Query: 157  ggcattttggtcggtgcaaccttccggcac 186
            ||||    ||||||||||||||||||||||
Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcac 1341

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  281 bits (142), Expect = 1e-72
 Identities = 231/261 (88%)
 Strand = Plus / Plus

                                                                            
Query: 197      ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
                |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 28303900 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 28303959

                                                                            
Query: 257      catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
                | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 28303960 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 28304019

                                                                            
Query: 317      cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
                |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 28304020 cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 28304079

                                                                            
Query: 377      cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
                ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 28304080 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 28304139

                                     
Query: 437      ccatnctacccgcaccagcgt 457
                |||| | ||| ||||| ||||
Sbjct: 28304140 ccatgcgacctgcacccgcgt 28304160



 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Plus

                                                                            
Query: 97       tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360

                                              
Query: 157      ggcattttggtcggtgcaaccttccggcac 186
                ||||    ||||||||||||||||||||||
Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcac 28302390



 Score =  109 bits (55), Expect = 8e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                            
Query: 336      gttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggtggc 395
                ||||||||| || |||||||||||||||||||||   || |||||||||||||| || ||
Sbjct: 28307716 gttgtacatccctgggagctgcacgttggtggggttgtccgcgatgttcatcagcgtcgc 28307775

                                                           
Query: 396      gttcaccatctggttgttgacggtgtactgcgtggttccgccc 438
                |||||||||||||||||| || ||||||||||| || ||||||
Sbjct: 28307776 gttcaccatctggttgttcaccgtgtactgcgtcgtgccgccc 28307818



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 115      gcagctgccgtcgtcgctccttgccgttgggtcgtagtt 153
                ||||||||||||||||||||| || || |||||||||||
Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagtt 28307230



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 214      cggtcgtcacgggtgggagcccagtagaacttctccat 251
                ||||| || ||||||||||||||||||||||| |||||
Sbjct: 28307621 cggtcctcgcgggtgggagcccagtagaacttgtccat 28307658

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
           insert sequence
          Length = 1721

 Score =  281 bits (142), Expect = 1e-72
 Identities = 231/261 (88%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 999 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 940

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 939 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 880

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 879 cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 820

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 819 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 760

                                
Query: 437 ccatnctacccgcaccagcgt 457
           |||| | ||| ||||| ||||
Sbjct: 759 ccatgcgacctgcacccgcgt 739



 Score =  115 bits (58), Expect = 1e-22
 Identities = 83/90 (92%), Gaps = 1/90 (1%)
 Strand = Plus / Minus

                                                                        
Query: 97   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504

                                          
Query: 157  ggcattttggtcggtgcaaccttccggcac 186
            ||||    ||||||||||||||||||||||
Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcac 1474

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
           insert sequence
          Length = 1682

 Score =  281 bits (142), Expect = 1e-72
 Identities = 231/261 (88%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 950 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 891

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 890 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 831

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 830 cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 771

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 770 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 711

                                
Query: 437 ccatnctacccgcaccagcgt 457
           |||| | ||| ||||| ||||
Sbjct: 710 ccatgcgacctgcacccgcgt 690



 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                        
Query: 97   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455

                                          
Query: 157  ggcattttggtcggtgcaaccttccggcac 186
            ||||    ||||||||||||||||||||||
Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcac 1425

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
           insert sequence
          Length = 1680

 Score =  281 bits (142), Expect = 1e-72
 Identities = 231/261 (88%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 988 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 929

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 928 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 869

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 868 cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 809

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 808 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 749

                                
Query: 437 ccatnctacccgcaccagcgt 457
           |||| | ||| ||||| ||||
Sbjct: 748 ccatgcgacctgcacccgcgt 728



 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                        
Query: 97   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493

                                          
Query: 157  ggcattttggtcggtgcaaccttccggcac 186
            ||||    ||||||||||||||||||||||
Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcac 1463

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  281 bits (142), Expect = 1e-72
 Identities = 231/261 (88%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 771 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 712

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 711 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 652

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 651 cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 592

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 591 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 532

                                
Query: 437 ccatnctacccgcaccagcgt 457
           |||| | ||| ||||| ||||
Sbjct: 531 ccatgcgacctgcacccgcgt 511



 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                        
Query: 97   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276

                                          
Query: 157  ggcattttggtcggtgcaaccttccggcac 186
            ||||    ||||||||||||||||||||||
Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcac 1246

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  281 bits (142), Expect = 1e-72
 Identities = 231/261 (88%)
 Strand = Plus / Plus

                                                                            
Query: 197      ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
                |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 28286349 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 28286408

                                                                            
Query: 257      catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
                | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 28286409 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 28286468

                                                                            
Query: 317      cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
                |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 28286469 cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 28286528

                                                                            
Query: 377      cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
                ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 28286529 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 28286588

                                     
Query: 437      ccatnctacccgcaccagcgt 457
                |||| | ||| ||||| ||||
Sbjct: 28286589 ccatgcgacctgcacccgcgt 28286609



 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Plus

                                                                            
Query: 97       tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809

                                              
Query: 157      ggcattttggtcggtgcaaccttccggcac 186
                ||||    ||||||||||||||||||||||
Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcac 28284839



 Score =  109 bits (55), Expect = 8e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                            
Query: 336      gttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggtggc 395
                ||||||||| || |||||||||||||||||||||   || |||||||||||||| || ||
Sbjct: 28290165 gttgtacatccctgggagctgcacgttggtggggttgtccgcgatgttcatcagcgtcgc 28290224

                                                           
Query: 396      gttcaccatctggttgttgacggtgtactgcgtggttccgccc 438
                |||||||||||||||||| || ||||||||||| || ||||||
Sbjct: 28290225 gttcaccatctggttgttcaccgtgtactgcgtcgtgccgccc 28290267



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 115      gcagctgccgtcgtcgctccttgccgttgggtcgtagtt 153
                ||||||||||||||||||||| || || |||||||||||
Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagtt 28289679



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 214      cggtcgtcacgggtgggagcccagtagaacttctccat 251
                ||||| || ||||||||||||||||||||||| |||||
Sbjct: 28290070 cggtcctcgcgggtgggagcccagtagaacttgtccat 28290107

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
           precursor, complete cds
          Length = 1706

 Score =  281 bits (142), Expect = 1e-72
 Identities = 231/261 (88%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 992 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 933

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 932 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 873

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 872 cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 813

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 812 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 753

                                
Query: 437 ccatnctacccgcaccagcgt 457
           |||| | ||| ||||| ||||
Sbjct: 752 ccatgcgacctgcacccgcgt 732



 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                        
Query: 97   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497

                                          
Query: 157  ggcattttggtcggtgcaaccttccggcac 186
            ||||    ||||||||||||||||||||||
Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcac 1467

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
           precursor, complete cds
          Length = 1623

 Score =  281 bits (142), Expect = 1e-72
 Identities = 231/261 (88%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 986 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 927

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 926 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 867

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 866 cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 807

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 806 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgcctc 747

                                
Query: 437 ccatnctacccgcaccagcgt 457
           |||| | ||| ||||| ||||
Sbjct: 746 ccatgcgacctgcacccgcgt 726



 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                        
Query: 97   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406

                                          
Query: 157  ggcattttggtcggtgcaaccttccggcac 186
            ||||    ||||||||||||||||||||||
Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcac 1376

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  280 bits (141), Expect = 4e-72
 Identities = 216/241 (89%)
 Strand = Plus / Minus

                                                                       
Query: 200 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 259
           ||||||| ||||  ||||| || | ||||||||||||||||||||||||||||||||| |
Sbjct: 642 tgcagacgccgacccggtcatccctggtgggagcccagtagaacttctccatacgaccgt 583

                                                                       
Query: 260 cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 319
           ||||||| || || |||||||| || ||||| ||||| |||||||||| ||||||||| |
Sbjct: 582 cacggatgaggggggcgtagagggtggagaagtcgttgccggtgacgatgatgggcacgc 523

                                                                       
Query: 320 gggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcga 379
           |||||||||||| ||||||||||||||| |||||||| ||||||||||||   |||||||
Sbjct: 522 gggggttctcctgcttgttgtacatgccggggagctggacgttggtggggttgtcggcga 463

                                                                       
Query: 380 tgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgccca 439
           ||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 462 tgttcatgagggtggcgttcaccatctggttgttgacggtgtactgggtggtgccgccca 403

            
Query: 440 t 440
           |
Sbjct: 402 t 402



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 107  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 166
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090

                          
Query: 167  tcggtgcaaccttc 180
            ||||| ||||||||
Sbjct: 1089 tcggtacaaccttc 1076

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  280 bits (141), Expect = 4e-72
 Identities = 216/241 (89%)
 Strand = Plus / Minus

                                                                       
Query: 200 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 259
           ||||||| ||||  ||||| || | ||||||||||||||||||||||||||||||||| |
Sbjct: 836 tgcagacgccgacccggtcatccctggtgggagcccagtagaacttctccatacgaccgt 777

                                                                       
Query: 260 cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 319
           ||||||| || || |||||||| || ||||| ||||| |||||||||| ||||||||| |
Sbjct: 776 cacggatgaggggggcgtagagggtggagaagtcgttgccggtgacgatgatgggcacgc 717

                                                                       
Query: 320 gggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcga 379
           |||||||||||| ||||||||||||||| |||||||| ||||||||||||   |||||||
Sbjct: 716 gggggttctcctgcttgttgtacatgccggggagctggacgttggtggggttgtcggcga 657

                                                                       
Query: 380 tgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgccca 439
           ||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 656 tgttcatgagggtggcgttcaccatctggttgttgacggtgtactgggtggtgccgccca 597

            
Query: 440 t 440
           |
Sbjct: 596 t 596



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 107  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 166
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246

                          
Query: 167  tcggtgcaaccttc 180
            ||||| ||||||||
Sbjct: 1245 tcggtacaaccttc 1232

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  276 bits (139), Expect = 6e-71
 Identities = 224/253 (88%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            |||||||||| ||||||||||| || |||||||| |||||||| ||||||||||||||||
Sbjct: 1004 ccttgcagacgccgatacggtcctcgcgggtgggcgcccagtaaaacttctccatacgac 945

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            | ||| | || || || ||||| |||||||| || ||||| |||||||| |  ||||| |
Sbjct: 944  cgtcaggaataaggggggcgtacagcgtcgaaaagtcgttgccggtgacnataatgggaa 885

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            |||||||||||||||||||||||||||| || || ||||||||||||||||| || ||||
Sbjct: 884  cacgggggttctcctccttgttgtacatccccggaagctgcacgttggtgggcgcgtcgg 825

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 824  cgatgttcatcagggtggcgttcaccatctggttgttcacggtgtactgggtggtcccgc 765

                         
Query: 437  ccatnctacccgc 449
            |||| | ||||||
Sbjct: 764  ccatccgacccgc 752



 Score =  141 bits (71), Expect = 2e-30
 Identities = 92/99 (92%)
 Strand = Plus / Minus

                                                                        
Query: 88   aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 147
            |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1489 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1430

                                                   
Query: 148  gtagttcttggcattttggtcggtgcaaccttccggcac 186
            | ||||||||||||   ||||||| ||||||||||||||
Sbjct: 1429 gaagttcttggcatcccggtcggtacaaccttccggcac 1391

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  272 bits (137), Expect = 9e-70
 Identities = 215/241 (89%)
 Strand = Plus / Minus

                                                                       
Query: 200 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 259
           ||||||| ||||  ||||| || | ||||||||||||||||||||||||||||||||| |
Sbjct: 943 tgcagacgccgacccggtcatccctggtgggagcccagtagaacttctccatacgaccgt 884

                                                                       
Query: 260 cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 319
           ||||||| || || |||||||| || ||||| ||||| |||||||||| ||||||||| |
Sbjct: 883 cacggatgaggggggcgtagagggtggagaagtcgttgccggtgacgatgatgggcacgc 824

                                                                       
Query: 320 gggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcga 379
           |||||||||| | ||||||||||||||| |||||||| ||||||||||||   |||||||
Sbjct: 823 gggggttctcttgcttgttgtacatgccggggagctggacgttggtggggttgtcggcga 764

                                                                       
Query: 380 tgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgccca 439
           ||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 763 tgttcatgagggtggcgttcaccatctggttgttgacggtgtactgggtggtgccgccca 704

            
Query: 440 t 440
           |
Sbjct: 703 t 703



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 107  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 166
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391

                          
Query: 167  tcggtgcaaccttc 180
            ||||| ||||||||
Sbjct: 1390 tcggtacaaccttc 1377

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  272 bits (137), Expect = 9e-70
 Identities = 215/241 (89%)
 Strand = Plus / Minus

                                                                       
Query: 200 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 259
           ||||||| ||||  ||||| || | ||||||||||||||||||||||||||||||||| |
Sbjct: 806 tgcagacgccgacccggtcatccctggtgggagcccagtagaacttctccatacgaccgt 747

                                                                       
Query: 260 cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 319
           ||||||| || || |||||||| || ||||| ||||| |||||||||| ||||||||| |
Sbjct: 746 cacggatgaggggggcgtagagggtggagaagtcgttgccggtgacgatgatgggcacgc 687

                                                                       
Query: 320 gggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcga 379
           |||||||||| | ||||||||||||||| |||||||| ||||||||||||   |||||||
Sbjct: 686 gggggttctcttgcttgttgtacatgccggggagctggacgttggtggggttgtcggcga 627

                                                                       
Query: 380 tgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgccca 439
           ||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 626 tgttcatgagggtggcgttcaccatctggttgttgacggtgtactgggtggtgccgccca 567

            
Query: 440 t 440
           |
Sbjct: 566 t 566



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 107  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 166
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216

                          
Query: 167  tcggtgcaaccttc 180
            ||||| ||||||||
Sbjct: 1215 tcggtacaaccttc 1202

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  266 bits (134), Expect = 6e-68
 Identities = 223/253 (88%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| ||||| ||||| || |||||||| |||||||||||||||||||| || |
Sbjct: 565 ccttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcggc 506

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | || ||||| || || ||||||||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 505 cgtcgcggatgagcggcgcgtagagcgtggagaagtcgttgccggtgacgatgatgggca 446

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           | |||||||| ||||||||||||||||| || |||||||||||||||||||||   ||||
Sbjct: 445 cgcgggggttgtcctccttgttgtacatccccgggagctgcacgttggtggggttgtcgg 386

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           |||||||||||||||||||||| |||||||||||||| || |||||||| ||||| ||||
Sbjct: 385 cgatgttcatcagggtggcgttgaccatctggttgttcaccgtgtactgggtggtgccgc 326

                        
Query: 437 ccatnctacccgc 449
           |||| | ||||||
Sbjct: 325 ccatgcgacccgc 313

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
           precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  266 bits (134), Expect = 6e-68
 Identities = 223/253 (88%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| ||||| ||||| || |||||||| |||||||||||||||||||| || |
Sbjct: 960 ccttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcggc 901

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | || ||||| || || ||||||||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 900 cgtcgcggatgagcggcgcgtagagcgtggagaagtcgttgccggtgacgatgatgggca 841

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           | |||||||| ||||||||||||||||| || |||||||||||||||||||||   ||||
Sbjct: 840 cgcgggggttgtcctccttgttgtacatccccgggagctgcacgttggtggggttgtcgg 781

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           |||||||||||||||||||||| |||||||||||||| || |||||||| ||||| ||||
Sbjct: 780 cgatgttcatcagggtggcgttgaccatctggttgttcaccgtgtactgggtggtgccgc 721

                        
Query: 437 ccatnctacccgc 449
           |||| | ||||||
Sbjct: 720 ccatgcgacccgc 708

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  258 bits (130), Expect = 1e-65
 Identities = 225/257 (87%)
 Strand = Plus / Minus

                                                                       
Query: 199 ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacca 258
           ||||| ||||||||||||||||| |  || || |||||||| || |||||||||||||| 
Sbjct: 834 ttgcaaacaccgatacggtcgtccctagttggtgcccagtaaaatttctccatacgaccg 775

                                                                       
Query: 259 tcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcaca 318
           |||||||| |||||||| || || || |||||||||||||| ||||||| |||||| |||
Sbjct: 774 tcacggatgagaggagcatacagtgtggagaaatcgttaccagtgacgatgatggggaca 715

                                                                       
Query: 319 cgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcg 378
           ||||||||||| |||||||||||||| || |||||||| ||||||||||||  |||||||
Sbjct: 714 cgggggttctcttccttgttgtacataccggggagctggacgttggtggggttatcggcg 655

                                                                       
Query: 379 atgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgccc 438
           |||||||| ||||| ||||| ||||||||||||||||||||||| || |||||||| |||
Sbjct: 654 atgttcatgagggtagcgttaaccatctggttgttgacggtgtattgggtggttcctccc 595

                            
Query: 439 atnctacccgcaccagc 455
           || | ||| ||||||||
Sbjct: 594 atacgaccggcaccagc 578

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B
           (RcaB) mRNA, complete cds; nuclear gene for chloroplast
           product
          Length = 1525

 Score =  254 bits (128), Expect = 2e-64
 Identities = 215/244 (88%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| ||||| || |||||||| |||||||||||||||||||| || |
Sbjct: 959 ccttgcacacgccgatgcggtcctcccgggtgggcgcccagtagaacttctccatgcggc 900

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | || ||||| || || ||||| ||||||||||| ||||| |||||||||| ||||||||
Sbjct: 899 cgtcccggatgaggggcgcgtacagcgtcgagaagtcgttgccggtgacgatgatgggca 840

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           | || ||||||||||||||||||||||| || |||| ||||||||||||||| || || |
Sbjct: 839 cgcgtgggttctcctccttgttgtacatccccgggaactgcacgttggtgggcgcgtccg 780

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || ||||||||||| || ||||
Sbjct: 779 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgcgtcgtcccgc 720

               
Query: 437 ccat 440
           ||||
Sbjct: 719 ccat 716

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  246 bits (124), Expect = 5e-62
 Identities = 214/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 520 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 461

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 460 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 401

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 400 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 341

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 340 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 281

               
Query: 437 ccat 440
           ||||
Sbjct: 280 ccat 277

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  246 bits (124), Expect = 5e-62
 Identities = 214/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 522 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 463

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 462 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 403

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 402 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 343

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 342 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 283

               
Query: 437 ccat 440
           ||||
Sbjct: 282 ccat 279

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  246 bits (124), Expect = 5e-62
 Identities = 214/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 526 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 467

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 466 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 407

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 406 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 347

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 346 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 287

               
Query: 437 ccat 440
           ||||
Sbjct: 286 ccat 283

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  246 bits (124), Expect = 5e-62
 Identities = 214/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 522 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 463

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 462 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 403

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 402 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 343

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 342 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 283

               
Query: 437 ccat 440
           ||||
Sbjct: 282 ccat 279

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  246 bits (124), Expect = 5e-62
 Identities = 214/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 522 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 463

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 462 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 403

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 402 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 343

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 342 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 283

               
Query: 437 ccat 440
           ||||
Sbjct: 282 ccat 279

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  246 bits (124), Expect = 5e-62
 Identities = 214/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 522 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 463

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 462 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 403

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 402 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 343

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 342 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 283

               
Query: 437 ccat 440
           ||||
Sbjct: 282 ccat 279

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  246 bits (124), Expect = 5e-62
 Identities = 214/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 522 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 463

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 462 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 403

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 402 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 343

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 342 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 283

               
Query: 437 ccat 440
           ||||
Sbjct: 282 ccat 279

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  246 bits (124), Expect = 5e-62
 Identities = 214/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 524 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 465

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 464 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 405

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 404 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 345

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 344 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 285

               
Query: 437 ccat 440
           ||||
Sbjct: 284 ccat 281

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  240 bits (121), Expect = 3e-60
 Identities = 184/205 (89%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 205 ccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcc 146

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | |||||||| || || ||||| ||||| ||||| ||||| |||||||||| |||||| |
Sbjct: 145 cgtcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggga 86

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||||||||| ||||||||||||||||| || ||||||||||||||||| |||   ||||
Sbjct: 85  cacgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcgg 26

                                    
Query: 377 cgatgttcatcagggtggcgttcac 401
           |||||||||||||||||||||||||
Sbjct: 25  cgatgttcatcagggtggcgttcac 1

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  238 bits (120), Expect = 1e-59
 Identities = 213/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 506 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 447

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | || || || || || ||||| ||||| ||||| ||||| |||||||||||||||||||
Sbjct: 446 cgtcgcgaatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgacgatgggca 387

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 386 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 327

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 326 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 267

               
Query: 437 ccat 440
           ||||
Sbjct: 266 ccat 263

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  238 bits (120), Expect = 1e-59
 Identities = 213/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 524 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 465

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | || ||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 464 cgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 405

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 404 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 345

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 344 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 285

               
Query: 437 ccat 440
           ||||
Sbjct: 284 ccat 281

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  238 bits (120), Expect = 1e-59
 Identities = 213/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 522 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 463

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | || ||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 462 cgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 403

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 402 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 343

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 342 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 283

               
Query: 437 ccat 440
           ||||
Sbjct: 282 ccat 279

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  238 bits (120), Expect = 1e-59
 Identities = 213/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 520 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 461

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | || ||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 460 cgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 401

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 400 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 341

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 340 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 281

               
Query: 437 ccat 440
           ||||
Sbjct: 280 ccat 277

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  238 bits (120), Expect = 1e-59
 Identities = 213/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 520 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 461

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | || ||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 460 cgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 401

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 400 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 341

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 340 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 281

               
Query: 437 ccat 440
           ||||
Sbjct: 280 ccat 277

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  238 bits (120), Expect = 1e-59
 Identities = 213/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| ||||| || |||||||| |||||||||||||| ||||| || |
Sbjct: 514 ccttgcacacgccgatgcggtcctcccgggtgggcgcccagtagaacttgtccatgcgcc 455

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | || ||||| || || ||||| ||||| ||||| ||||| |||||||||||||||||||
Sbjct: 454 cgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgacgatgggca 395

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 394 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 335

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 334 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 275

               
Query: 437 ccat 440
           ||||
Sbjct: 274 ccat 271

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  238 bits (120), Expect = 1e-59
 Identities = 213/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 522 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 463

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | || ||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 462 cgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 403

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 402 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 343

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 342 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 283

               
Query: 437 ccat 440
           ||||
Sbjct: 282 ccat 279

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  238 bits (120), Expect = 1e-59
 Identities = 213/244 (87%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||| || ||||| |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 526 ccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcc 467

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | || ||||| || || ||||| ||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 466 cgtcgcggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggca 407

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| ||||| ||| ||||| ||||||| || |||||||||||||||||||||   ||||
Sbjct: 406 cacgcgggttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcgg 347

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct: 346 cgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgggtggtgccgc 287

               
Query: 437 ccat 440
           ||||
Sbjct: 286 ccat 283

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  236 bits (119), Expect = 5e-59
 Identities = 218/253 (86%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||| ||||| ||||| || |||||||| |||||||||||||||||||| || |
Sbjct: 960 ccttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcggc 901

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           | || ||||| || || ||||||||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 900 cgtcgcggatgagcggcgcgtagagcgtggagaagtcgttgccggtgacgatgatgggca 841

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           | |     || ||||||||||||||||| || |||||||||||||||||||||   ||||
Sbjct: 840 cgcnnnnnttgtcctccttgttgtacatccccgggagctgcacgttggtggggttgtcgg 781

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           |||||||||||||||||||||| |||||||||||||| || |||||||| ||||| ||||
Sbjct: 780 cgatgttcatcagggtggcgttgaccatctggttgttcaccgtgtactgggtggtgccgc 721

                        
Query: 437 ccatnctacccgc 449
           |||| | ||||||
Sbjct: 720 ccatgcgacccgc 708

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  234 bits (118), Expect = 2e-58
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 1126 ccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctccatacgtc 1067

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            |||||||||| ||||||||||| || || |||||||||||||| |||   | |||||| |
Sbjct: 1066 catcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaatgatgggga 1007

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            |||| | |||||| |||||||||||||| || |||||||| |||||||| |||  ||| |
Sbjct: 1006 cacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgggttatcag 947

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            | |||||||| || || ||||| ||||||||||||||||| |||||||| || || || |
Sbjct: 946  caatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactgagtagtaccac 887

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| | ||||||||||||||
Sbjct: 886  ccatacgacccgcaccagcgt 866

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  234 bits (118), Expect = 2e-58
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 1126 ccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctccatacgtc 1067

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            |||||||||| ||||||||||| || || |||||||||||||| |||   | |||||| |
Sbjct: 1066 catcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaatgatgggga 1007

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            |||| | |||||| |||||||||||||| || |||||||| |||||||| |||  ||| |
Sbjct: 1006 cacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgggttatcag 947

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            | |||||||| || || ||||| ||||||||||||||||| |||||||| || || || |
Sbjct: 946  caatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactgagtagtaccac 887

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| | ||||||||||||||
Sbjct: 886  ccatacgacccgcaccagcgt 866

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  234 bits (118), Expect = 2e-58
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 1155 ccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctccatacgtc 1096

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            |||||||||| ||||||||||| || || |||||||||||||| |||   | |||||| |
Sbjct: 1095 catcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaatgatgggga 1036

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            |||| | |||||| |||||||||||||| || |||||||| |||||||| |||  ||| |
Sbjct: 1035 cacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgggttatcag 976

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            | |||||||| || || ||||| ||||||||||||||||| |||||||| || || || |
Sbjct: 975  caatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactgagtagtaccac 916

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| | ||||||||||||||
Sbjct: 915  ccatacgacccgcaccagcgt 895

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  234 bits (118), Expect = 2e-58
 Identities = 222/257 (86%)
 Strand = Plus / Minus

                                                                       
Query: 199 ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacca 258
           ||||| ||||||| ||||||||| |  || || |||||||| || |||||||||||||| 
Sbjct: 833 ttgcaaacaccgacacggtcgtccctagttggtgcccagtaaaatttctccatacgaccg 774

                                                                       
Query: 259 tcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcaca 318
           |||||||| |||||||| || || || |||||||||||||| |||||||  ||||| |||
Sbjct: 773 tcacggatgagaggagcatacagtgtggagaaatcgttaccagtgacgataatggggaca 714

                                                                       
Query: 319 cgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcg 378
           ||||||||||| |||||||||||||| || |||||||| ||||||||||||  |||||||
Sbjct: 713 cgggggttctcttccttgttgtacataccggggagctggacgttggtggggttatcggcg 654

                                                                       
Query: 379 atgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgccc 438
           |||||||| ||||| || || ||||||||||||||||||||||| || |||||||| |||
Sbjct: 653 atgttcatgagggtagcattaaccatctggttgttgacggtgtattgggtggttcctccc 594

                            
Query: 439 atnctacccgcaccagc 455
           || | ||| ||||||||
Sbjct: 593 atacgaccggcaccagc 577

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  234 bits (118), Expect = 2e-58
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 1037 ccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctccatacgtc 978

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            |||||||||| ||||||||||| || || |||||||||||||| |||   | |||||| |
Sbjct: 977  catcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaatgatgggga 918

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            |||| | |||||| |||||||||||||| || |||||||| |||||||| |||  ||| |
Sbjct: 917  cacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgggttatcag 858

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            | |||||||| || || ||||| ||||||||||||||||| |||||||| || || || |
Sbjct: 857  caatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactgagtagtaccac 798

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| | ||||||||||||||
Sbjct: 797  ccatacgacccgcaccagcgt 777

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  234 bits (118), Expect = 2e-58
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 952 ccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctccatacgtc 893

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           |||||||||| ||||||||||| || || |||||||||||||| |||   | |||||| |
Sbjct: 892 catcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaatgatgggga 833

                                                                       
Query: 317 cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
           |||| | |||||| |||||||||||||| || |||||||| |||||||| |||  ||| |
Sbjct: 832 cacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgggttatcag 773

                                                                       
Query: 377 cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
           | |||||||| || || ||||| ||||||||||||||||| |||||||| || || || |
Sbjct: 772 caatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactgagtagtaccac 713

                                
Query: 437 ccatnctacccgcaccagcgt 457
           |||| | ||||||||||||||
Sbjct: 712 ccatacgacccgcaccagcgt 692

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  234 bits (118), Expect = 2e-58
 Identities = 225/261 (86%)
 Strand = Plus / Plus

                                                                         
Query: 197   ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
             |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 14162 ccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctccatacgtc 14221

                                                                         
Query: 257   catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
             |||||||||| ||||||||||| || || |||||||||||||| |||   | |||||| |
Sbjct: 14222 catcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaatgatgggga 14281

                                                                         
Query: 317   cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
             |||| | |||||| |||||||||||||| || |||||||| |||||||| |||  ||| |
Sbjct: 14282 cacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgggttatcag 14341

                                                                         
Query: 377   cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
             | |||||||| || || ||||| ||||||||||||||||| |||||||| || || || |
Sbjct: 14342 caatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactgagtagtaccac 14401

                                  
Query: 437   ccatnctacccgcaccagcgt 457
             |||| | ||||||||||||||
Sbjct: 14402 ccatacgacccgcaccagcgt 14422

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  234 bits (118), Expect = 2e-58
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 1040 ccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctccatacgtc 981

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            |||||||||| ||||||||||| || || |||||||||||||| |||   | |||||| |
Sbjct: 980  catcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaatgatgggga 921

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            |||| | |||||| |||||||||||||| || |||||||| |||||||| |||  ||| |
Sbjct: 920  cacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgggttatcag 861

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            | |||||||| || || ||||| ||||||||||||||||| |||||||| || || || |
Sbjct: 860  caatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactgagtagtaccac 801

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| | ||||||||||||||
Sbjct: 800  ccatacgacccgcaccagcgt 780

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  234 bits (118), Expect = 2e-58
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 1037 ccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctccatacgtc 978

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            |||||||||| ||||||||||| || || |||||||||||||| |||   | |||||| |
Sbjct: 977  catcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaatgatgggga 918

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            |||| | |||||| |||||||||||||| || |||||||| |||||||| |||  ||| |
Sbjct: 917  cacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgggttatcag 858

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            | |||||||| || || ||||| ||||||||||||||||| |||||||| || || || |
Sbjct: 857  caatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactgagtagtaccac 798

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| | ||||||||||||||
Sbjct: 797  ccatacgacccgcaccagcgt 777

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  234 bits (118), Expect = 2e-58
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 1040 ccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctccatacgtc 981

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            |||||||||| ||||||||||| || || |||||||||||||| |||   | |||||| |
Sbjct: 980  catcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaatgatgggga 921

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            |||| | |||||| |||||||||||||| || |||||||| |||||||| |||  ||| |
Sbjct: 920  cacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgggttatcag 861

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            | |||||||| || || ||||| ||||||||||||||||| |||||||| || || || |
Sbjct: 860  caatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactgagtagtaccac 801

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| | ||||||||||||||
Sbjct: 800  ccatacgacccgcaccagcgt 780

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  234 bits (118), Expect = 2e-58
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 3121 ccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctccatacgtc 3062

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            |||||||||| ||||||||||| || || |||||||||||||| |||   | |||||| |
Sbjct: 3061 catcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaatgatgggga 3002

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            |||| | |||||| |||||||||||||| || |||||||| |||||||| |||  ||| |
Sbjct: 3001 cacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgggttatcag 2942

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            | |||||||| || || ||||| ||||||||||||||||| |||||||| || || || |
Sbjct: 2941 caatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactgagtagtaccac 2882

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| | ||||||||||||||
Sbjct: 2881 ccatacgacccgcaccagcgt 2861

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  226 bits (114), Expect = 5e-56
 Identities = 224/261 (85%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 1029 ccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctccatacgtc 970

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            |||||||||| ||||||||||| || || |||||||||||||| |||   | |||||| |
Sbjct: 969  catcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaatgatgggga 910

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            |||| | |||||| |||||||||||||| || || ||||| |||||||| |||  ||| |
Sbjct: 909  cacgtgcgttctcttccttgttgtacattcctggaagctggacgttggttgggttatcag 850

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            | |||||||| || || ||||| ||||||||||||||||| |||||||| || || || |
Sbjct: 849  caatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactgagtagtaccac 790

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| | ||||||||||||||
Sbjct: 789  ccatacgacccgcaccagcgt 769

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  226 bits (114), Expect = 5e-56
 Identities = 224/261 (85%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 1155 ccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctccatacgtc 1096

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            |||||||||| ||||||||||| || || |||||||||||||| |||   | |||||| |
Sbjct: 1095 catcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaatgatgggga 1036

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            |||| | |||||| |||||||||||||| || |||||||| |||||||| |||  ||| |
Sbjct: 1035 cacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgggttatcag 976

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            | |||||||| || || ||||| |||||||| |||||||| |||||||| || || || |
Sbjct: 975  caatgttcatgagtgttgcgttaaccatctgattgttgacagtgtactgagtagtaccac 916

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| | ||||||||||||||
Sbjct: 915  ccatacgacccgcaccagcgt 895

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  222 bits (112), Expect = 8e-55
 Identities = 205/236 (86%)
 Strand = Plus / Minus

                                                                        
Query: 205  acaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatcacgg 264
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1068 acaccgatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatcacgg 1009

                                                                        
Query: 265  atcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacacggggg 324
            || || |||||||| |  || ||||| |||||||| |||||||  ||||| ||||||| |
Sbjct: 1008 ataaggggagcgtacaaggtggagaagtcgttaccagtgacgataatgggaacacgggcg 949

                                                                        
Query: 325  ttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttc 384
            ||||| | |||||||||||| |||||||| || || |||||||||   || || ||||||
Sbjct: 948  ttctcttgcttgttgtacataccagggagttggacattggtggggttgtcagcaatgttc 889

                                                                    
Query: 385  atcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgcccat 440
            || ||||||||||| |||||||||||||| |||||||| || ||||| || |||||
Sbjct: 888  atgagggtggcgttaaccatctggttgttcacggtgtattgtgtggtgcctcccat 833

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score =  220 bits (111), Expect = 3e-54
 Identities = 204/235 (86%)
 Strand = Plus / Minus

                                                                        
Query: 200  tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 259
            ||||||| || ||||| || || ||||||||||||||||||||||||||||||||||| |
Sbjct: 1034 tgcagactccaatacgatcttcgcgggtgggagcccagtagaacttctccatacgaccgt 975

                                                                        
Query: 260  cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 319
            ||||||| ||||||||||| |  || |||||||||||||||||||| | ||| || ||||
Sbjct: 974  cacggatgagaggagcgtacaatgttgagaaatcgttaccggtgacaatgattgggacac 915

                                                                        
Query: 320  gggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcga 379
            ||||||||||||||||||||||||| || || ||||| ||||| || |||  ||| || |
Sbjct: 914  gggggttctcctccttgttgtacatacctggaagctggacgtttgtcgggttatcagcaa 855

                                                                   
Query: 380  tgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttcc 434
            ||||||| |||||||| |||||||| ||||||||||| ||||| || ||||||||
Sbjct: 854  tgttcatgagggtggcattcaccatttggttgttgacagtgtattgggtggttcc 800

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 1 mRNA, complete cds
          Length = 1559

 Score =  218 bits (110), Expect = 1e-53
 Identities = 202/233 (86%)
 Strand = Plus / Minus

                                                                       
Query: 225 ggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgt 284
           |||||| |||||||| ||||||||||||||||| |||||||| || || ||||| |||||
Sbjct: 993 ggtgggtgcccagtaaaacttctccatacgaccgtcacggatgagcggcgcgtacagcgt 934

                                                                       
Query: 285 cgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacat 344
           ||||||||||||||||||||| | ||| || ||||| |||||||| ||||||||||||||
Sbjct: 933 cgagaaatcgttaccggtgacaatgatcggaacacgagggttctcttccttgttgtacat 874

                                                                       
Query: 345 gccagggagctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccat 404
            || |||||||| ||||||||||||  ||| ||||||||||| || ||||||||||||||
Sbjct: 873 accggggagctgaacgttggtggggttatcagcgatgttcatgagtgtggcgttcaccat 814

                                                                
Query: 405 ctggttgttgacggtgtactgcgtggttccgcccatnctacccgcaccagcgt 457
            |||||||| || ||||| || |||||||| ||||| | ||| || |||||||
Sbjct: 813 ttggttgttcactgtgtattgtgtggttcctcccatacgaccggctccagcgt 761

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  216 bits (109), Expect = 5e-53
 Identities = 127/133 (95%)
 Strand = Plus / Minus

                                                                       
Query: 197 ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 133 ccttgcagacaccgatacggtcgtcgcgggtgggagcccagtagaacttctccatacgac 74

                                                                       
Query: 257 catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
           |||||||||||||||| ||||| | |||||||||||||||||| ||||||||||||||||
Sbjct: 73  catcacggatcagaggggcgtacaacgtcgagaaatcgttaccagtgacgacgatgggca 14

                        
Query: 317 cacgggggttctc 329
           |||| ||||||||
Sbjct: 13  cacgtgggttctc 1



 Score =  208 bits (105), Expect = 1e-50
 Identities = 173/194 (89%), Gaps = 7/194 (3%)
 Strand = Plus / Minus

                                                                       
Query: 15  atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 68
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 746 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 687

                                                                       
Query: 69  ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 128
           | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 686 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 628

                                                                       
Query: 129 cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 188
           | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 627 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 568

                         
Query: 189 ncnnagtaccttgc 202
            |  ||||||||||
Sbjct: 567 gcaaagtaccttgc 554

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  202 bits (102), Expect = 7e-49
 Identities = 221/261 (84%)
 Strand = Plus / Minus

                                                                        
Query: 197  ccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgac 256
            ||||||||||||| |||||||| || | ||| |||||||||||||| || ||||||||||
Sbjct: 1021 ccttgcagacaccaatacggtcttccctggtaggagcccagtagaatttttccatacgac 962

                                                                        
Query: 257  catcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggca 316
            |||||||||| ||||||||||| |  |||||||| |||||||| ||||| | ||| ||||
Sbjct: 961  catcacggataagaggagcgtacaatgtcgagaagtcgttaccagtgacaatgataggca 902

                                                                        
Query: 317  cacgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcgg 376
            |||| |||||||| |||||||||||||| ||||||||||| || || || |||   || |
Sbjct: 901  cacgagggttctcttccttgttgtacataccagggagctggacatttgttgggttgtcag 842

                                                                        
Query: 377  cgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgc 436
            | |||||||| |||||||| ||||||||||||||||| || ||||| || || ||||| |
Sbjct: 841  caatgttcatgagggtggcattcaccatctggttgttaacagtgtattgagttgttccac 782

                                 
Query: 437  ccatnctacccgcaccagcgt 457
            |||| | ||| || |||||||
Sbjct: 781  ccatacgaccagctccagcgt 761

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  196 bits (99), Expect = 4e-47
 Identities = 204/239 (85%)
 Strand = Plus / Minus

                                                                        
Query: 202  cagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatca 261
            |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2813 cagacaccaatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatca 2754

                                                                        
Query: 262  cggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacacgg 321
            ||||| || |||||||| |  || |||||||||||||| || || | |||||| ||||||
Sbjct: 2753 cggataaggggagcgtacaaggtggagaaatcgttaccagtaacaatgatggggacacgg 2694

                                                                        
Query: 322  gggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatg 381
            |  || |||| |||||||||||| |||||||| || || ||||| |||   || || |||
Sbjct: 2693 gcattgtcctgcttgttgtacataccagggagttggacattggttgggttgtcagcaatg 2634

                                                                       
Query: 382  ttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgcccat 440
            ||||| || |||||||| |||||||||||||| |||||||| || ||||| || |||||
Sbjct: 2633 ttcatgagtgtggcgttaaccatctggttgtttacggtgtattgggtggtgcctcccat 2575

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  196 bits (99), Expect = 4e-47
 Identities = 177/203 (87%)
 Strand = Plus / Minus

                                                                       
Query: 232 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 291
           ||||||||||||||||||||||||||||||||||| |||||||| || || || ||||||
Sbjct: 991 gcccagtagaacttctccatacgaccatcacggatgagaggagcataaagtgttgagaaa 932

                                                                       
Query: 292 tcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccaggg 351
           |||||||| ||||| | |||||||||||||| ||| || |||||||||||||| ||||| 
Sbjct: 931 tcgttaccagtgacaatgatgggcacacgggcgttatcttccttgttgtacataccagga 872

                                                                       
Query: 352 agctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttg 411
           |||||||| || ||||||  ||| || |||||||| || ||||| |||||||||||||||
Sbjct: 871 agctgcacatttgtggggttatcagcaatgttcatgagagtggcattcaccatctggttg 812

                                  
Query: 412 ttgacggtgtactgcgtggttcc 434
           || || ||||| || ||||||||
Sbjct: 811 ttcacagtgtattgggtggttcc 789

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score =  192 bits (97), Expect = 7e-46
 Identities = 205/241 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 259
           |||||||||| ||||| || || |  || |||||||||||||||||||||||||||||||
Sbjct: 456 tgcagacaccaatacgatcttctctagtaggagcccagtagaacttctccatacgaccat 397

                                                                       
Query: 260 cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 319
           ||||||| |||||||| || || || |||||||| ||||||||||| | |||||||||||
Sbjct: 396 cacggatgagaggagcataaagtgttgagaaatcattaccggtgacaatgatgggcacac 337

                                                                       
Query: 320 gggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcga 379
           | |  || || |||||||||||||| |||||||| || || |||||||||  ||| || |
Sbjct: 336 gagcattgtcttccttgttgtacataccagggagttggacattggtggggttatcagcaa 277

                                                                       
Query: 380 tgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgccca 439
           ||||||| || ||||| |||||||| ||||||||||| ||||| || |||||||| ||||
Sbjct: 276 tgttcatgagtgtggcattcaccatttggttgttgacagtgtattgtgtggttccaccca 217

            
Query: 440 t 440
           |
Sbjct: 216 t 216

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  188 bits (95), Expect = 1e-44
 Identities = 176/203 (86%)
 Strand = Plus / Minus

                                                                       
Query: 232 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 291
           ||||||||||||||||||||||| |||||||| || |||||||| || ||||| ||||||
Sbjct: 995 gcccagtagaacttctccatacgcccatcacgaatgagaggagcatacagcgttgagaaa 936

                                                                       
Query: 292 tcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccaggg 351
           || ||||||||||| | |||||||||||||| |||||| |||||||||||||| ||||| 
Sbjct: 935 tcattaccggtgacaatgatgggcacacgggcgttctcttccttgttgtacataccagga 876

                                                                       
Query: 352 agctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttg 411
           |||||||| || || |||  ||| || |||||||| || ||||| |||||||||||||||
Sbjct: 875 agctgcacatttgtagggttatcagcaatgttcatgagagtggcattcaccatctggttg 816

                                  
Query: 412 ttgacggtgtactgcgtggttcc 434
           || || ||||| || ||||||||
Sbjct: 815 ttcacagtgtattgggtggttcc 793

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  188 bits (95), Expect = 1e-44
 Identities = 203/239 (84%)
 Strand = Plus / Minus

                                                                        
Query: 202  cagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatca 261
            |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 cagacaccaatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatca 1126

                                                                        
Query: 262  cggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacacgg 321
            ||||| || |||||||| |  || |||||||||||||| || || | |||||| ||||||
Sbjct: 1125 cggataaggggagcgtacaaggtggagaaatcgttaccagtaacaatgatggggacacgg 1066

                                                                        
Query: 322  gggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatg 381
            |  || |||| |||||||||||| |||||||| || || ||||| |||   || || |||
Sbjct: 1065 gcattgtcctgcttgttgtacataccagggagttggacattggttgggttgtcagcaatg 1006

                                                                       
Query: 382  ttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgcccat 440
            ||||  || |||||||| |||||||||||||| |||||||| || ||||| || |||||
Sbjct: 1005 ttcaggagtgtggcgttaaccatctggttgtttacggtgtattgggtggtgcctcccat 947

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score =  174 bits (88), Expect = 2e-40
 Identities = 192/227 (84%)
 Strand = Plus / Minus

                                                                       
Query: 229 ggagcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgag 288
           ||||||||||||||||| |||||||||||||| ||||| || ||||| || || |  |||
Sbjct: 419 ggagcccagtagaacttttccatacgaccatcgcggataaggggagcatatagtgctgag 360

                                                                       
Query: 289 aaatcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgcca 348
           |||||||| || ||||||| ||||||||||||||||||||||||||||| |||||| |||
Sbjct: 359 aaatcgtttcctgtgacgatgatgggcacacgggggttctcctccttgtcgtacattcca 300

                                                                       
Query: 349 gggagctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctgg 408
           ||||| || || ||||| |||  ||| || |||||||| || || || || |||||||| 
Sbjct: 299 gggagttggacattggttgggttatcagcaatgttcatgagtgtagcattaaccatctga 240

                                                          
Query: 409 ttgttgacggtgtactgcgtggttccgcccatnctacccgcaccagc 455
           |||||||| ||||| || || ||||| ||||| ||||| ||||||||
Sbjct: 239 ttgttgactgtgtattgtgtagttcctcccattctacctgcaccagc 193

---

>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score =  170 bits (86), Expect = 3e-39
 Identities = 188/222 (84%)
 Strand = Plus / Minus

                                                                       
Query: 200 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 259
           |||| ||||| |||||||| ||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 222 tgcaaacaccaatacggtcctcacgagtgggtgcccagtagaatttctccatacgaccat 163

                                                                       
Query: 260 cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 319
           ||||||| |||||||| || |  || ||||| |||||||| || |||| |||||| ||||
Sbjct: 162 cacggatgagaggagcatacaaggtagagaagtcgttaccagtaacgatgatgggtacac 103

                                                                       
Query: 320 gggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcga 379
           | |  || |||| |||||||||||| ||||||||||| || ||||| |||   || || |
Sbjct: 102 gagcattgtcctgcttgttgtacataccagggagctggacattggttgggttgtcagcaa 43

                                                     
Query: 380 tgttcatcagggtggcgttcaccatctggttgttgacggtgt 421
           ||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 42  tgttcatgagggtggcgttaaccatctggttgttgacagtgt 1

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  163 bits (82), Expect = 6e-37
 Identities = 202/242 (83%)
 Strand = Plus / Minus

                                                                        
Query: 199  ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacca 258
            ||||||||||| |||||||| || | |||||| ||||||||||| ||||||||||| |||
Sbjct: 1019 ttgcagacaccaatacggtcctccctggtgggtgcccagtagaatttctccatacggcca 960

                                                                        
Query: 259  tcacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcaca 318
            |||||||| ||||| || || |  || ||||| |||||||| ||||| | |||||| |||
Sbjct: 959  tcacggataagaggggcatacaatgttgagaagtcgttaccagtgacaatgatgggaaca 900

                                                                        
Query: 319  cgggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcg 378
            || |||||||| |||||||||||||||||||| ||||| || || || |||   || || 
Sbjct: 899  cgagggttctcttccttgttgtacatgccaggaagctggacatttgttgggttgtcagct 840

                                                                        
Query: 379  atgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgccc 438
            |||||||| |||||||| ||||||||||| ||||| || ||||| || || ||||| |||
Sbjct: 839  atgttcatgagggtggcattcaccatctgattgttaacagtgtattgagttgttccaccc 780

              
Query: 439  at 440
            ||
Sbjct: 779  at 778

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score =  161 bits (81), Expect = 2e-36
 Identities = 215/258 (83%), Gaps = 4/258 (1%)
 Strand = Plus / Minus

                                                                        
Query: 202  cagacaccgatacggtcgtcacgggtgggagcccagt--agaacttctccatacgaccat 259
            ||||||||||||||||| |||||||| ||   |||||  |||||||||||||||| ||||
Sbjct: 1016 cagacaccgatacggtcttcacgggtcggg--ccagtcaagaacttctccatacgtccat 959

                                                                        
Query: 260  cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 319
            || |||| |||||| |||| |  || |||||||||||||| |||   | |||||| ||||
Sbjct: 958  caaggatgagaggaccgtataaggtggagaaatcgttaccagtgcaaatgatggggacac 899

                                                                        
Query: 320  gggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcga 379
            | | |||||| |||||||||||||| || |||||||| |||||||| |||  ||| || |
Sbjct: 898  gtgcgttctcttccttgttgtacattcctgggagctggacgttggttgggttatcagcaa 839

                                                                        
Query: 380  tgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgccca 439
            ||||||| || || ||||| ||||||||||||||||| |||||||| || || || ||||
Sbjct: 838  tgttcatgagtgttgcgttaaccatctggttgttgacagtgtactgagtagtaccaccca 779

                              
Query: 440  tnctacccgcaccagcgt 457
            | | ||||||||||||||
Sbjct: 778  tacgacccgcaccagcgt 761

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score =  151 bits (76), Expect = 2e-33
 Identities = 180/215 (83%)
 Strand = Plus / Minus

                                                                       
Query: 232 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 291
           ||||||||||||||||||||||||||||||||||| |||||||| || |  || ||||| 
Sbjct: 963 gcccagtagaacttctccatacgaccatcacggataagaggagcatacaatgtggagaag 904

                                                                       
Query: 292 tcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccaggg 351
           |||||||| ||||| |  ||||| || | || |||||| | |||||||||||| || |||
Sbjct: 903 tcgttaccagtgacaataatgggtaccctggcgttctcttgcttgttgtacataccgggg 844

                                                                       
Query: 352 agctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttg 411
           ||||| || || || |||   || || |||||||| |||||||| |||||||||||||||
Sbjct: 843 agctggacatttgttgggttgtcagcaatgttcatgagggtggcattcaccatctggttg 784

                                              
Query: 412 ttgacggtgtactgcgtggttccgcccatnctacc 446
           ||||||||||| || || ||||| ||||| |||||
Sbjct: 783 ttgacggtgtattgggtagttccacccattctacc 749

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score =  147 bits (74), Expect = 4e-32
 Identities = 188/226 (83%)
 Strand = Plus / Minus

                                                                        
Query: 200  tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 259
            ||||||| ||||| ||||| |||||||||||   ||||||| |||||||||| || || |
Sbjct: 1847 tgcagacgccgatgcggtcctcacgggtggggttccagtagtacttctccatgcggccgt 1788

                                                                        
Query: 260  cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 319
            ||||||| || || ||||| || || |||||||||||||| |||  ||| ||||| ||||
Sbjct: 1787 cacggatgaggggggcgtacagggtggagaaatcgttacccgtgcagacaatgggaacac 1728

                                                                        
Query: 320  gggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcga 379
            ||||  ||| | |||  ||||||| ||| || |||||||||||||| |||  ||| ||||
Sbjct: 1727 ggggaatctgcacctccttgtacacgccgggcagctgcacgttggtagggttatcagcga 1668

                                                          
Query: 380  tgttcatcagggtggcgttcaccatctggttgttgacggtgtactg 425
            ||||||| ||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 1667 tgttcatgagggtagcgttgaccatctggttgttgacagtgtactg 1622

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase mRNA, complete cds
          Length = 1693

 Score =  145 bits (73), Expect = 1e-31
 Identities = 193/233 (82%)
 Strand = Plus / Minus

                                                                       
Query: 208 ccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatcacggatc 267
           ||||| ||||| || ||||||||   ||||||| |||||||||| || ||||| ||||||
Sbjct: 910 ccgatgcggtcctcgcgggtggggttccagtagtacttctccatgcggccatcgcggatc 851

                                                                       
Query: 268 agaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttc 327
           || || ||||| || || ||||| ||||| || |||   || |||||||| || ||| ||
Sbjct: 850 aggggcgcgtacagggtggagaagtcgttgcccgtgcacacaatgggcacgcgagggatc 791

                                                                       
Query: 328 tcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatc 387
           ||||| || |||||||  || || ||||| |||||||| |||   |||||||||||||||
Sbjct: 790 tcctcgttcttgtacacaccgggcagctggacgttggtcgggttgtcggcgatgttcatc 731

                                                                
Query: 388 agggtggcgttcaccatctggttgttgacggtgtactgcgtggttccgcccat 440
           |||||||||||||||||||||||||| ||||||||||| |||||  |||||||
Sbjct: 730 agggtggcgttcaccatctggttgttcacggtgtactgggtggtgtcgcccat 678

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score =  143 bits (72), Expect = 6e-31
 Identities = 179/215 (83%)
 Strand = Plus / Minus

                                                                       
Query: 232 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 291
           ||||| ||||||||||||||||||||||||||||| |||||||| || |  || ||||| 
Sbjct: 308 gcccaatagaacttctccatacgaccatcacggataagaggagcatacaatgtggagaag 249

                                                                       
Query: 292 tcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccaggg 351
           |||||||| ||||| |  ||||| || | || |||||| | |||||||||||| || |||
Sbjct: 248 tcgttaccagtgacaataatggggaccctggcgttctcttgcttgttgtacataccgggg 189

                                                                       
Query: 352 agctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttg 411
           ||||| || || || |||  ||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 188 agctggacatttgtcgggttatcagcgatgttcatgagagtggcattcaccatctggttg 129

                                              
Query: 412 ttgacggtgtactgcgtggttccgcccatnctacc 446
           ||||| ||||| || || ||||| ||||| |||||
Sbjct: 128 ttgacagtgtattgggtagttccacccattctacc 94

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
           (pJQ4)
          Length = 1655

 Score =  143 bits (72), Expect = 6e-31
 Identities = 179/215 (83%)
 Strand = Plus / Minus

                                                                       
Query: 232 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 291
           ||||| ||||||||||||||||||||||||||||| |||||||| || |  || ||||| 
Sbjct: 952 gcccaatagaacttctccatacgaccatcacggataagaggagcatacaatgtggagaag 893

                                                                       
Query: 292 tcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccaggg 351
           |||||||| ||||| |  ||||| || | || |||||| | |||||||||||| || |||
Sbjct: 892 tcgttaccagtgacaataatggggactctggcgttctcttgcttgttgtacataccgggg 833

                                                                       
Query: 352 agctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttg 411
           ||||| ||||| || |||  ||| || |||||||| || ||||| |||||||||||||||
Sbjct: 832 agctggacgtttgtcgggttatcagcaatgttcatgagagtggcattcaccatctggttg 773

                                              
Query: 412 ttgacggtgtactgcgtggttccgcccatnctacc 446
           ||||| ||||| || || ||||| ||||| |||||
Sbjct: 772 ttgacagtgtattgggtagttccacccattctacc 738

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score =  141 bits (71), Expect = 2e-30
 Identities = 185/223 (82%)
 Strand = Plus / Minus

                                                                       
Query: 200 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 259
           |||||||||| || ||||| || | |||||| ||||||||||| ||||||||||||||||
Sbjct: 861 tgcagacaccaattcggtcttctctggtgggcgcccagtagaatttctccatacgaccat 802

                                                                       
Query: 260 cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 319
           |||| || ||||||||||| |  |||||||| || ||||| ||||||| ||| || ||||
Sbjct: 801 cacgaatgagaggagcgtacaatgtcgagaagtcattacctgtgacgatgatcggtacac 742

                                                                       
Query: 320 gggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcga 379
           | || ||||| |||||||||||||| || |||||||| || ||||| ||    || || |
Sbjct: 741 gtggattctcttccttgttgtacatacccgggagctgaacattggttggattgtcagcaa 682

                                                      
Query: 380 tgttcatcagggtggcgttcaccatctggttgttgacggtgta 422
           ||||||| ||||| || |||||||| |||||||| || |||||
Sbjct: 681 tgttcatgagggtagcattcaccatttggttgttcacagtgta 639

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  141 bits (71), Expect = 2e-30
 Identities = 185/223 (82%)
 Strand = Plus / Minus

                                                                        
Query: 200  tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 259
            |||||||||| || ||||| || | |||||| ||||||||||| ||||||||||||||||
Sbjct: 1034 tgcagacaccaattcggtcttctctggtgggcgcccagtagaatttctccatacgaccat 975

                                                                        
Query: 260  cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 319
            |||| || ||||||||||| |  |||||||| || ||||| ||||||| ||| || ||||
Sbjct: 974  cacgaatgagaggagcgtacaatgtcgagaagtcattacctgtgacgatgatcggtacac 915

                                                                        
Query: 320  gggggttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcga 379
            | || ||||| |||||||||||||| || |||||||| || ||||| ||    || || |
Sbjct: 914  gtggattctcttccttgttgtacatacccgggagctgaacattggttggattgtcagcaa 855

                                                       
Query: 380  tgttcatcagggtggcgttcaccatctggttgttgacggtgta 422
            ||||||| ||||| || |||||||| |||||||| || |||||
Sbjct: 854  tgttcatgagggtagcattcaccatttggttgttcacagtgta 812

---

>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score =  133 bits (67), Expect = 6e-28
 Identities = 124/143 (86%)
 Strand = Plus / Minus

                                                                       
Query: 200 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 259
           |||||||||| ||||| ||||| ||||| || ||||||||||| ||||||||||||||||
Sbjct: 143 tgcagacaccaatacgatcgtcgcgggttggtgcccagtagaatttctccatacgaccat 84

                                                                       
Query: 260 cacggatcagaggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacac 319
           ||||||| || ||||| || |  || |||||||| ||||||||||| | || ||||||||
Sbjct: 83  cacggataaggggagcatacaaggtggagaaatcattaccggtgacaatgacgggcacac 24

                                  
Query: 320 gggggttctcctccttgttgtac 342
           |||||||||| || |||||||||
Sbjct: 23  gggggttctcttctttgttgtac 1

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score =  119 bits (60), Expect = 8e-24
 Identities = 176/215 (81%)
 Strand = Plus / Minus

                                                                       
Query: 232 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 291
           ||||||||||||||||||||||||||||||||||| || ||||| || |  || ||||||
Sbjct: 222 gcccagtagaacttctccatacgaccatcacggataagtggagcatacaatgtggagaaa 163

                                                                       
Query: 292 tcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccaggg 351
           |||||||| |||||||  || || || | ||  ||||| | |||||||||||| || |||
Sbjct: 162 tcgttaccagtgacgataatagggaccctggcattctcttgcttgttgtacataccgggg 103

                                                                       
Query: 352 agctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttg 411
           ||||| || || || |||   || || |||||||| || ||||| |||||||| ||||||
Sbjct: 102 agctggacatttgtcgggttgtcagcaatgttcatgagagtggcattcaccatttggttg 43

                                              
Query: 412 ttgacggtgtactgcgtggttccgcccatnctacc 446
           ||||| ||||| || || ||||| ||||| |||||
Sbjct: 42  ttgacagtgtattgggtagttccacccattctacc 8

---

>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small
           isoform precursor, mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 93

 Score =  119 bits (60), Expect = 8e-24
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                       
Query: 103 aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 162
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  
Sbjct: 93  aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34

                                   
Query: 163 ttggtcggtgcaaccttccggcac 186
             ||||||||||||||||||||||
Sbjct: 33  agggtcggtgcaaccttccggcac 10

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score =  119 bits (60), Expect = 8e-24
 Identities = 176/215 (81%)
 Strand = Plus / Minus

                                                                       
Query: 232 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 291
           ||||||||||||||||||||||||||||||||||| || ||||| || |  || ||||||
Sbjct: 982 gcccagtagaacttctccatacgaccatcacggataagtggagcatacaatgtggagaaa 923

                                                                       
Query: 292 tcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccaggg 351
           |||||||| |||||||  || || || | ||  ||||| | |||||||||||| || |||
Sbjct: 922 tcgttaccagtgacgataatagggaccctggcattctcttgcttgttgtacataccgggg 863

                                                                       
Query: 352 agctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttg 411
           ||||| || || || |||   || || |||||||| || ||||| |||||||| ||||||
Sbjct: 862 agctggacatttgtcgggttgtcagcaatgttcatgagagtggcattcaccatttggttg 803

                                              
Query: 412 ttgacggtgtactgcgtggttccgcccatnctacc 446
           ||||| ||||| || || ||||| ||||| |||||
Sbjct: 802 ttgacagtgtattgggtagttccacccattctacc 768

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score =  103 bits (52), Expect = 5e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                        
Query: 373  tcggcgatgttcatcagggtggcgttcaccatctggttgttgacggtgtactgcgtggtt 432
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| 
Sbjct: 1957 tcggcgatgttcatcagggtggcgttcaccatctggttgttcacggtgtactgggtggtg 1898

                    
Query: 433  ccgcccat 440
             |||||||
Sbjct: 1897 tcgcccat 1890

---

>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic
           sequence
          Length = 234

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                       
Query: 97  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
           |||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76

                                         
Query: 157 ggcattttggtcggtgcaaccttccggcac 186
           ||||    ||||||  ||||||||||||||
Sbjct: 75  ggcaacagggtcgggtcaaccttccggcac 46

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 173/215 (80%)
 Strand = Plus / Minus

                                                                       
Query: 232 gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 291
           ||||||||||| ||||||||||||||||||||||| ||||| || || |  || ||||||
Sbjct: 999 gcccagtagaatttctccatacgaccatcacggataagaggtgcatacaatgtggagaaa 940

                                                                       
Query: 292 tcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccaggg 351
           |||||||| ||||| |  || || || | ||  ||||| | |||||||||||| || |||
Sbjct: 939 tcgttaccagtgacaataataggtaccctggcattctcttgcttgttgtacataccgggg 880

                                                                       
Query: 352 agctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttg 411
           || || || || || |||  ||| || |||||||| || || || |||||||| ||||||
Sbjct: 879 agttggacattcgtcgggttatcagcaatgttcatgagtgtagcattcaccatttggttg 820

                                              
Query: 412 ttgacggtgtactgcgtggttccgcccatnctacc 446
           ||||| ||||| || || ||||| ||||| |||||
Sbjct: 819 ttgacagtgtattgtgtagttccacccattctacc 785

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                          
Query: 352    agctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttg 411
              ||||||||||||||||||   |||||||||||||||||||||||| ||||||  ||| ||
Sbjct: 445647 agctgcacgttggtggggttgtcggcgatgttcatcagggtggcgctcaccagttgggtg 445706

                            
Query: 412    ttgacggtgtactg 425
              ||||||||||||||
Sbjct: 445707 ttgacggtgtactg 445720

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 155/192 (80%)
 Strand = Plus / Minus

                                                                       
Query: 234 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 293
           ||||||||||||||||||||| |||||||| ||||  ||||| || |  || ||||||||
Sbjct: 678 ccagtagaacttctccatacgcccatcacgaatcaatggagcatacaaagttgagaaatc 619

                                                                       
Query: 294 gttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccagggag 353
            || || || || || || || ||||| || || || |||||||||||||| ||||| | 
Sbjct: 618 atttcctgtcacaacaattggaacacgaggattttcttccttgttgtacattccaggcaa 559

                                                                       
Query: 354 ctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttgtt 413
           ||| || || || |||  ||| || |||||||| |||||||| || ||||||||||||||
Sbjct: 558 ctgaacattcgttgggttatcagcaatgttcatgagggtggcattgaccatctggttgtt 499

                       
Query: 414 gacggtgtactg 425
            || ||||||||
Sbjct: 498 cacagtgtactg 487

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 172/215 (80%)
 Strand = Plus / Minus

                                                                        
Query: 211  atacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatcacggatcaga 270
            ||||| || ||||| || |||||||||||||| || ||||| ||||||||||| || |||
Sbjct: 1018 atacgatcttcacgagttggagcccagtagaatttatccatccgaccatcacgaatgaga 959

                                                                        
Query: 271  ggagcgtagagcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcc 330
            || || || | ||| ||||| |||||||| || || | |||||| || | ||| || || 
Sbjct: 958  ggtgcatataacgttgagaagtcgttaccagttactatgatgggaactctgggattttct 899

                                                                        
Query: 331  tccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagg 390
            |||||||| |||||||| || |||||||| ||||| |||   || || |||||||| || 
Sbjct: 898  tccttgttatacatgcctggtagctgcacattggttgggttgtcagcaatgttcataaga 839

                                               
Query: 391  gtggcgttcaccatctggttgttgacggtgtactg 425
            || || || ||||||||||| || || ||||||||
Sbjct: 838  gtagcatttaccatctggttattcactgtgtactg 804

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 182/230 (79%)
 Strand = Plus / Plus

                                                                        
Query: 217  tcgtcacgggtgggagcccagtagaacttctccatacgaccatcacggatcagaggagcg 276
            |||||||| || || ||||||||||| || |||||||| |||||||| || | |||||| 
Sbjct: 6892 tcgtcacgagtaggtgcccagtagaatttttccatacgtccatcacgaattaaaggagca 6951

                                                                        
Query: 277  tagagcgtcgagaaatcgttaccggtgacgacgatgggcacacgggggttctcctccttg 336
            || | ||| ||||| || || || ||||||| ||| || || ||||  ||||| || |||
Sbjct: 6952 tacaacgtagagaagtcattgccagtgacgatgatagggacgcgggcattctcttctttg 7011

                                                                        
Query: 337  ttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttcatcagggtggcg 396
            |||||||| || || || || || ||||| |||   || || |||||||| ||||| || 
Sbjct: 7012 ttgtacataccgggaagttgaacattggtagggttgtcagcaatgttcatgagggttgca 7071

                                                              
Query: 397  ttcaccatctggttgttgacggtgtactgcgtggttccgcccatnctacc 446
            || ||||||||||||||||| ||||| || || || || ||||| |||||
Sbjct: 7072 tttaccatctggttgttgactgtgtattgagtagtgccacccattctacc 7121

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                           
Query: 97      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
               |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354

                                             
Query: 157     ggcattttggtcggtgcaaccttccggcac 186
               ||||    ||||||||||||||||||||||
Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcac 4541324

---

>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                         
Query: 97    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 156
             |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728

                                           
Query: 157   ggcattttggtcggtgcaaccttccggcac 186
             ||||    ||||||||||||||||||||||
Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcac 84698

---

>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete
           cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 234 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 293
           |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 970 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 911

                       
Query: 294 gttaccggtgac 305
           ||| || |||||
Sbjct: 910 gttccctgtgac 899

---

>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1299

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 234 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 293
           |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 936 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 877

                       
Query: 294 gttaccggtgac 305
           ||| || |||||
Sbjct: 876 gttccctgtgac 865

---

>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 234 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 293
           |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 970 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 911

                       
Query: 294 gttaccggtgac 305
           ||| || |||||
Sbjct: 910 gttccctgtgac 899

---

>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1496

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 234 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 293
           |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 944 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 885

                       
Query: 294 gttaccggtgac 305
           ||| || |||||
Sbjct: 884 gttccctgtgac 873

---

>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence
          Length = 262

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 325 ttctcctccttgttgtacatgccagggagctgcacgttggtgggggcatcggcgatgttc 384
           |||||||  ||||||||||| ||||||||||| || || || ||   ||| || ||||||
Sbjct: 188 ttctcctgtttgttgtacataccagggagctgaacattagttggattatcagcaatgttc 129

                                           
Query: 385 atcagggtggcgttcaccatctggttgttgac 416
           || ||||| || |||||||||||||| |||||
Sbjct: 128 ataagggttgcattcaccatctggttattgac 97

---

>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-D21
          Length = 1447

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 234 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 293
           |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 957 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 898

                       
Query: 294 gttaccggtgac 305
           ||| || |||||
Sbjct: 897 gttccctgtgac 886

---

>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                         
Query: 234   ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 293
             |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 97615 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 97674

                         
Query: 294   gttaccggtgac 305
             ||| || |||||
Sbjct: 97675 gttccctgtgac 97686

---

>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 234 ccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatc 293
           |||||||||||||||||| |  || ||||||||||| ||||| || || || ||||||||
Sbjct: 998 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 939

              
Query: 294 gtt 296
           |||
Sbjct: 938 gtt 936

---

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 163/209 (77%)
 Strand = Plus / Plus

                                                                          
Query: 232    gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 291
              ||||| ||||| |||||||||||||| ||||| || |||||||| || |  || || |||
Sbjct: 103825 gcccaatagaatttctccatacgaccgtcacgaataagaggagcatacaatgttgaaaaa 103884

                                                                          
Query: 292    tcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccaggg 351
              || ||||| || || | ||| |||||||| |  ||||| || ||||| ||||| ||||| 
Sbjct: 103885 tcattaccagtaacaatgataggcacacgtgcattctcttctttgttatacataccagga 103944

                                                                          
Query: 352    agctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttg 411
              || || || || || |||  ||| || |||||||| || || || || ||||| || |||
Sbjct: 103945 agttgaacatttgttgggttatcagcaatgttcataagtgttgcatttaccatttgattg 104004

                                           
Query: 412    ttgacggtgtactgcgtggttccgcccat 440
              || || |||||||| || ||||| |||||
Sbjct: 104005 ttcactgtgtactgtgttgttccacccat 104033

---

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 163/209 (77%)
 Strand = Plus / Plus

                                                                         
Query: 232   gcccagtagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaa 291
             ||||| ||||| |||||||||||||| ||||| || |||||||| || |  || || |||
Sbjct: 82850 gcccaatagaatttctccatacgaccgtcacgaataagaggagcatacaatgttgaaaaa 82909

                                                                         
Query: 292   tcgttaccggtgacgacgatgggcacacgggggttctcctccttgttgtacatgccaggg 351
             || ||||| || || | ||| |||||||| |  ||||| || ||||| ||||| ||||| 
Sbjct: 82910 tcattaccagtaacaatgataggcacacgtgcattctcttctttgttatacataccagga 82969

                                                                         
Query: 352   agctgcacgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttg 411
             || || || || || |||  ||| || |||||||| || || || || ||||| || |||
Sbjct: 82970 agttgaacatttgttgggttatcagcaatgttcataagtgttgcatttaccatttgattg 83029

                                          
Query: 412   ttgacggtgtactgcgtggttccgcccat 440
             || || |||||||| || ||||| |||||
Sbjct: 83030 ttcactgtgtactgtgttgttccacccat 83058

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 73      aaacatcagatattaaaagtg 93
               |||||||||||||||||||||
Sbjct: 3040440 aaacatcagatattaaaagtg 3040420

---

>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 593

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Minus

                                                                       
Query: 234 ccagtagaacttctccatacgaccatcacggatcagag-gagcgtagagcgtcgagaaat 292
           |||||||||||||||||| |  || ||||||||||| | |||| || || || |||||||
Sbjct: 208 ccagtagaacttctccattcttccttcacggatcagtgagagcatacagtgtagagaaat 149

                        
Query: 293 cgttaccggtgac 305
           |||| || |||||
Sbjct: 148 cgttccctgtgac 136

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 73      aaacatcagatattaaaagtg 93
               |||||||||||||||||||||
Sbjct: 3040385 aaacatcagatattaaaagtg 3040365

---

>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 73     aaacatcagatattaaaagtg 93
              |||||||||||||||||||||
Sbjct: 114403 aaacatcagatattaaaagtg 114423

---

>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence
          Length = 177402

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     tcagatattaaaagtggcat 97
              ||||||||||||||||||||
Sbjct: 141058 tcagatattaaaagtggcat 141077

---

>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence
          Length = 163782

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     tcagatattaaaagtggcat 97
              ||||||||||||||||||||
Sbjct: 142564 tcagatattaaaagtggcat 142583

---

>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence
          Length = 204813

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    tcagatattaaaagtggcat 97
             ||||||||||||||||||||
Sbjct: 95930 tcagatattaaaagtggcat 95911

---

>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306,  section 128 of 469 of the
            complete genome
          Length = 11388

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 106  ggtgtaaaggcagctgccgtcgtcgctc 133
            |||||| |||| ||||||||||||||||
Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133

---

>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 26    aaacatgcccagcaatcgcttgga 49
             |||||||||||||||||| |||||
Sbjct: 41692 aaacatgcccagcaatcgattgga 41715

---

>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    tggcatgcttaaaaggtgta 111
             ||||||||||||||||||||
Sbjct: 78235 tggcatgcttaaaaggtgta 78254

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     acaccgatacggtcgtcacg 224
               ||||||||||||||||||||
Sbjct: 3056308 acaccgatacggtcgtcacg 3056327

---

>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2739

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 369  ggcatcggcgatgttcatca 388
            ||||||||||||||||||||
Sbjct: 1877 ggcatcggcgatgttcatca 1896

---

>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 369  ggcatcggcgatgttcatca 388
            ||||||||||||||||||||
Sbjct: 1878 ggcatcggcgatgttcatca 1897

---

>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence
          Length = 42802

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   ggcatcggcgatgttcatca 388
             ||||||||||||||||||||
Sbjct: 34337 ggcatcggcgatgttcatca 34318

---

>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA
            complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 369  ggcatcggcgatgttcatca 388
            ||||||||||||||||||||
Sbjct: 1863 ggcatcggcgatgttcatca 1882

---

>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete
              sequence
          Length = 230848

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 77     atcagatattaaaagtggcatgct 100
              ||||||||||||||||| ||||||
Sbjct: 127875 atcagatattaaaagtgccatgct 127852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,609,164
Number of Sequences: 3902068
Number of extensions: 2609164
Number of successful extensions: 52174
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51825
Number of HSP's gapped (non-prelim): 317
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---