ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| baald15 | 588 | AV933900 | not_full | gb|AC153134.5| Mus musculus BAC clone RP24-202N2 from chromosome 13, complete sequence Length = 177669 | 52 | not_full | YL122_MIMIV (Q5UPJ9) Putative ankyrin repeat protein L122 Length = 627 | 2 | -- | --- | - | -- | --- | - |
| baald13 | 583 | AV933899 | not_full | gb|BT009244.1| Triticum aestivum clone wlk1.pk0017.e10:fis, full insert mRNA sequence Length = 2511 | 500 | not_full | LEU2_AZOVI (P96195) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 470 | 12 | -- | --- | - | -- | --- | - |
| baald12 | 591 | AV933898 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 125 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 35 | -- | --- | - | -- | --- | - |
| baald11 | 447 | AV933897 | not_full | ref|XM_507049.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.36-2 mRNA Length = 1298 | 147 | not_full | IAA10_ORYSA (Q59AA1) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) Length = 281 | 119 | -- | --- | - | -- | --- | - |
| baald10 | 640 | AV832845 | not_full | emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 | 131 | full | RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 175 | 58 | -- | --- | - | -- | --- | - |
| baald08 | 522 | AV933896 | not_full | dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 | 60 | not_full | Y4105_ARATH (Q9M158) Putative protein At4g01050 Length = 466 | 23 | -- | --- | - | -- | --- | - |
| baald07 | 621 | AV933895 | not_full | ref|XM_472413.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1653 | 91 | full | OTUD4_HUMAN (Q01804) OTU domain-containing protein 4 (HIV-1-induced protein HIN-1) Length = 145 | 23 | -- | --- | - | -- | --- | - |
| baald06 | 651 | AV933894 | not_full | ref|XM_470141.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2522 | 500 | full | HSP71_ARATH (P22953) Heat shock cognate 70 kDa protein 1 (Hsc70.1) Length = 651 | 500 | -- | --- | - | -- | --- | - |
| baald03 | 111 | AV832844 | not_full | gb|AC010045.5| Drosophila melanogaster 3L BAC RP98-17C17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179649 | 9 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| baald01 | 576 | AV933893 | not_full | gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 | 47 | not_full | SUBL_ARATH (O65351) Subtilisin-like protease precursor (EC 3.4.21.-) (Cucumisin-like serine protease) Length = 757 | 9 | -- | --- | - | -- | --- | - |
| baalc24 | 595 | AV933892 | not_full | ref|XM_507049.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.36-2 mRNA Length = 1298 | 224 | not_full | IAA10_ORYSA (Q59AA1) Auxin-responsive protein IAA10 (Indoleacetic acid-induced protein 10) Length = 281 | 106 | -- | --- | - | -- | --- | - |
| baalc23 | 559 | AV832843 | not_full | dbj|AK119893.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-B08, full insert sequence Length = 3219 | 500 | not_full | CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel alpha-1G subunit (Voltage-gated calcium channel alpha subunit Cav3.1) (Cav3.1c) (NBR13) Length = 2377 | 2 | -- | --- | - | -- | --- | - |
| baalc22 | 506 | AV933891 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 38 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| baalc21 | 560 | AV933890 | not_full | ref|XM_476545.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2319 | 61 | not_full | PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) Length = 1021 | 23 | -- | --- | - | -- | --- | - |
| baalc20 | 532 | AV933889 | not_full | dbj|AK106147.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H04, full insert sequence Length = 1249 | 99 | not_full | BUP1_PONPY (Q5RBM6) Beta-ureidopropionase (EC 3.5.1.6) (Beta-alanine synthase) (N-carbamoyl-beta-alanine amidohydrolase) Length = 384 | 43 | -- | --- | - | -- | --- | - |
| baalc19 | 244 | AV933888 | not_full | gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 | 103 | not_full | RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 | 38 | -- | --- | - | -- | --- | - |
| baalc18 | 546 | AV933887 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 119 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 38 | -- | --- | - | -- | --- | - |
| baalc16 | 627 | AV933886 | not_full | dbj|AK067605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111L13, full insert sequence Length = 1556 | 37 | not_full | VA0D2_ARATH (Q9LHA4) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14) (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) Length = 351 | 28 | -- | --- | - | -- | --- | - |
| baalc15 | 557 | AV933885 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA protein 1) Length = 124 | 3 | -- | --- | - | -- | --- | - |
| baalc14 | 487 | AV933884 | not_full | gb|AY082350.1| Lolium perenne fructosyltransferase (FT2) mRNA, complete cds Length = 2337 | 48 | not_full | INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) (Sucrose 1) (Invertase 1) Length = 670 | 40 | -- | --- | - | -- | --- | - |
| baalc13 | 490 | AV933883 | not_full | gb|BT018226.1| Zea mays clone EL01N0561F09.c mRNA sequence Length = 923 | 60 | not_full | RK5_ORYSA (Q9ZST0) 50S ribosomal protein L5, chloroplast precursor (Fragment) Length = 280 | 167 | -- | --- | - | -- | --- | - |
| baalc12 | 642 | AV933882 | not_full | ref|NM_194876.1| Oryza sativa (japonica cultivar-group) putative RNA-binding protein (OSJNBa0028C16.8), mRNA Length = 1419 | 500 | not_full | ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimulating protein) Length = 594 | 412 | -- | --- | - | -- | --- | - |
| baalc11 | 600 | AV933881 | not_full | gb|AY123422.1| Triticum aestivum putative Rieske Fe-S precursor protein mRNA, complete cds Length = 866 | 122 | not_full | UCRIA_WHEAT (Q7X9A6) Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) Length = 222 | 115 | -- | --- | - | -- | --- | - |
| baalc09 | 495 | AV933880 | not_full | ref|NM_191560.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1440 | 113 | not_full | ANGLT_ROSHC (Q4R1I9) Anthocyanidin 5,3-O-glucosyltransferase (EC 2.4.1.-) (UDP-glucose: anthocyanidin 5,3-O-glucosyltransferase) Length = 473 | 33 | -- | --- | - | -- | --- | - |
| baalc08 | 317 | AV933879 | not_full | gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 | 107 | not_full | RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 | 32 | -- | --- | - | -- | --- | - |
| baalc07 | 676 | AV933878 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 121 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 28 | -- | --- | - | -- | --- | - |
| baalc06 | 644 | AV933877 | not_full | ref|NM_193389.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1296 | 218 | not_full | UAP56_RAT (Q63413) Spliceosome RNA helicase Bat1 (EC 3.6.1.-) (DEAD box protein UAP56) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) Length = 428 | 498 | -- | --- | - | -- | --- | - |
| baalc04 | 585 | AV933876 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA protein 1) Length = 124 | 2 | -- | --- | - | -- | --- | - |
| baalc03 | 637 | AV933875 | not_full | ref|XM_482080.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1220 | 66 | not_full | NUD15_ARATH (Q8GYB1) Nudix hydrolase 15, mitochondrial precursor (EC 3.6.1.-) (AtNUDT15) Length = 285 | 42 | -- | --- | - | -- | --- | - |
| baalc01 | 658 | AV933874 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 141 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 38 | -- | --- | - | -- | --- | - |
| baalb24 | 536 | AV933873 | not_full | ref|NM_192058.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 6474 | 78 | not_full | GLSN_MEDSA (Q03460) Glutamate synthase [NADH], chloroplast precursor (EC 1.4.1.14) (NADH-GOGAT) Length = 2194 | 357 | -- | --- | - | -- | --- | - |
| baalb22 | 623 | AV933872 | not_full | ref|XM_468115.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1331 | 63 | not_full | PALA_YEAST (Q12033) pH-response regulator protein palA/RIM20 (Regulator of IME2 protein 20) Length = 661 | 10 | -- | --- | - | -- | --- | - |
| baalb21 | 495 | AV933871 | full | gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds; nuclear gene for chloroplast product Length = 481 | 347 | not_full | PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor Length = 140 | 15 | -- | --- | - | -- | --- | - |
| baalb20 | 610 | AV832842 | not_full | gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence Length = 398525 | 51 | not_full | DOC10_HUMAN (Q96BY6) Dedicator of cytokinesis protein 10 (Protein zizimin 3) Length = 2183 | 2 | -- | --- | - | -- | --- | - |
| baalb19 | 578 | AV933870 | not_full | ref|XM_470390.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1892 | 44 | not_full | ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis thaliana envelope membrane integrase) (Ath4) (ALBINO3-like protein 1) Length = 1013 | 309 | -- | --- | - | -- | --- | - |
| baalb18 | 568 | AV933869 | not_full | dbj|AK103334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125P15, full insert sequence Length = 2297 | 65 | not_full | NCAP_IBVK (P12648) Nucleocapsid protein (N structural protein) (NC) Length = 409 | 13 | -- | --- | - | -- | --- | - |
| baalb17 | 608 | AV933868 | not_full | emb|AL590293.3| Human DNA sequence from clone RP11-227B10 on chromosome Xq21.33-22.3, complete sequence Length = 67911 | 42 | not_full | LORI_MOUSE (P18165) Loricrin Length = 486 | 60 | -- | --- | - | -- | --- | - |
| baalb16 | 595 | AV933867 | not_full | gb|M90077.1|WHTTEF1X Wheat translation elongation factor 1 alpha-subunit (TEF1) mRNA, complete cds Length = 2062 | 500 | not_full | EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 500 | -- | --- | - | -- | --- | - |
| baalb15 | 574 | AV933866 | not_full | ref|NM_197204.1| Oryza sativa (japonica cultivar-group) putative PKCq-interacting protein (OSJNBa0078O01.9), mRNA Length = 1840 | 58 | not_full | TXNL2_RAT (Q9JLZ1) Thioredoxin-like 2 protein (PKC-interacting cousin of thioredoxin) (PKCq-interacting protein) (PKC-theta-interacting protein) Length = 337 | 97 | -- | --- | - | -- | --- | - |
| baalb13 | 529 | AV933865 | not_full | gb|AY831390.1| Oryza sativa (indica cultivar-group) BTH-induced protein phosphatase 2C 2 K2 form (BIPP2C2) mRNA, complete cds, alternatively spliced Length = 1526 | 59 | not_full | PDP2_HUMAN (Q9P2J9) [Pyruvate dehydrogenase [lipoamide]]-phosphatase 2, mitochondrial precursor (EC 3.1.3.43) (PDP 2) (Pyruvate dehydrogenase phosphatase, catalytic subunit 2) (PDPC 2) Length = 529 | 56 | -- | --- | - | -- | --- | - |
| baalb12 | 551 | AV933864 | not_full | dbj|AK101913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H09, full insert sequence Length = 1494 | 58 | full | Y112B_HAEIN (O86233) Hypothetical protein HI1126.1 Length = 371 | 41 | -- | --- | - | -- | --- | - |
| baalb10 | 560 | AV933863 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 148 | not_full | ASCL2_HUMAN (Q99929) Achaete-scute homolog 2 (HASH2) Length = 193 | 127 | -- | --- | - | -- | --- | - |
| baalb07 | 578 | AV933862 | not_full | emb|X53580.1|HVGLN2R Barley gln mRNA for glutamine synthetase 2 (EC 6.3.1.2) Length = 1600 | 500 | not_full | GLNA2_HORVU (P13564) Glutamine synthetase leaf isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Chloroplast GS2) Length = 434 | 164 | -- | --- | - | -- | --- | - |
| baalb06 | 616 | AV933861 | not_full | ref|NM_185203.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2053 | 167 | not_full | MHK_ARATH (P43294) Serine/threonine-protein kinase MHK (EC 2.7.11.22) Length = 443 | 500 | -- | --- | - | -- | --- | - |
| baalb05 | 417 | AV933860 | not_full | dbj|AK059679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-H04, full insert sequence Length = 486 | 120 | not_full | RL38_ARATH (O22860) 60S ribosomal protein L38 Length = 69 | 19 | -- | --- | - | -- | --- | - |
| baalb04 | 626 | AV933859 | not_full | dbj|AK071450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098M18, full insert sequence Length = 1651 | 500 | not_full | ACT7_ARATH (P53492) Actin-7 (Actin-2) Length = 377 | 401 | -- | --- | - | -- | --- | - |
| baalb03 | 636 | AV933858 | full | emb|AJ234400.1|HVU234400 Hordeum vulgare partial mRNA; clone cMWG0645 Length = 1050 | 500 | full | ACT7_ARATH (P53492) Actin-7 (Actin-2) Length = 377 | 396 | -- | --- | - | -- | --- | - |
| baala24 | 605 | AV933857 | not_full | ref|XM_478424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2115 | 139 | not_full | YK62_CAEEL (P34341) Hypothetical protein C29E4.2 Length = 821 | 8 | -- | --- | - | -- | --- | - |
| baala23 | 613 | AV933856 | not_full | gb|AY107731.1| Zea mays PCO069957 mRNA sequence Length = 925 | 78 | not_full | CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel [Contains: Glutamic acid-rich protein (GARP); Cyclic-nucleotide-gated cation channel 4 (CNG channel 4) (CNG-4) (Cyclic nucleotide-gated cation channel modulatory subunit)] Length = 1394 | 34 | -- | --- | - | -- | --- | - |
| baala21 | 642 | AV933855 | not_full | dbj|AK068001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128H21, full insert sequence Length = 2281 | 38 | not_full | ZN646_HUMAN (O15015) Zinc finger protein 646 Length = 1829 | 5 | -- | --- | - | -- | --- | - |
