Clone Name	baalc08
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	549	e-153
2	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	549	e-153
3	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	549	e-153
4	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	470	e-129
5	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	351	9e-94
6	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	313	2e-82
7	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	313	2e-82
8	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	307	1e-80
9	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	307	1e-80
10	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	305	5e-80
11	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	305	5e-80
12	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	305	5e-80
13	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	305	5e-80
14	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	305	5e-80
15	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	305	5e-80
16	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	305	5e-80
17	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	305	5e-80
18	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	305	5e-80
19	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	305	5e-80
20	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	305	5e-80
21	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	305	5e-80
22	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	299	3e-78
23	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	299	3e-78
24	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	297	1e-77
25	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	274	2e-70
26	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	258	1e-65
27	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	258	1e-65
28	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	242	6e-61
29	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	242	6e-61
30	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	242	6e-61
31	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	242	6e-61
32	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	242	6e-61
33	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	242	6e-61
34	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	242	6e-61
35	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	242	6e-61
36	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	238	9e-60
37	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	236	3e-59
38	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	234	1e-58
39	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	234	1e-58
40	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	234	1e-58
41	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	234	1e-58
42	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	234	1e-58
43	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	234	1e-58
44	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	234	1e-58
45	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	234	1e-58
46	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	234	1e-58
47	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	234	1e-58
48	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	234	1e-58
49	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	234	1e-58
50	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	234	1e-58
51	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	234	1e-58
52	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	234	1e-58
53	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	234	1e-58
54	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	234	1e-58
55	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	232	5e-58
56	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	228	9e-57
57	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	226	3e-56
58	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	226	3e-56
59	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	226	3e-56
60	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	224	1e-55
61	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	222	5e-55
62	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	216	3e-53
63	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	206	3e-50
64	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	194	1e-46
65	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	190	2e-45
66	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	190	2e-45
67	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	182	5e-43
68	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	180	2e-42
69	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	176	3e-41
70	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	174	1e-40
71	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	167	3e-38
72	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	157	3e-35
73	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	157	3e-35
74	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	153	4e-34
75	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	151	2e-33
76	gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi...	151	2e-33
77	emb|Y10657.1|CLRCAGENE C.littorale rca gene	147	2e-32
78	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	145	1e-31
79	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	135	9e-29
80	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	129	6e-27
81	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	129	6e-27
82	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	119	6e-24
83	gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence	119	6e-24
84	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	107	2e-20
85	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	105	8e-20
86	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	94	3e-16
87	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	82	1e-12
88	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	80	5e-12
89	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	74	3e-10
90	ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G7...	56	7e-05
91	gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se...	56	7e-05
92	gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se...	56	7e-05
93	gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	7e-05
94	gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	7e-05
95	emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Co...	56	7e-05
96	dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown ...	56	7e-05
97	gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N...	56	7e-05
98	emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Co...	54	3e-04
99	gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic s...	52	0.001
100	gb|AC145325.3| Oryza sativa (japonica cultivar-group) chromosome...	42	1.1
101	emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Co...	42	1.1
102	emb|AL353783.14| Human DNA sequence from clone RP11-271O3 on chr...	40	4.2
103	ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like f...	40	4.2
104	ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like f...	40	4.2
105	gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence	40	4.2
106	gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein p...	40	4.2
107	emb|AL806510.12| Mouse DNA sequence from clone RP23-155P8 on chr...	40	4.2

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  549 bits (277), Expect = e-153
 Identities = 311/317 (98%), Gaps = 4/317 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
            ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 6480 gtaccgtgaggctgcag-acatgatcaag-aagggtaag-atgtgctgcctcttcatcaa 6536

                                                                        
Query: 61   cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6537 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 6596

                                                                        
Query: 121  gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6597 g-atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 6655

                                                                        
Query: 181  gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
            ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6656 gcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 6715

                                                                        
Query: 241  cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6716 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 6775

                             
Query: 301  cccgtgacgaccgtatc 317
            |||||||||||||||||
Sbjct: 6776 cccgtgacgaccgtatc 6792



 Score =  313 bits (158), Expect = 2e-82
 Identities = 246/274 (89%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||||||||||||||||||||| || ||||| || |||||  |||||||||| || ||
Sbjct: 3389 gatgtgctgcctcttcatcaacgacctggacgccggcgcgggccggatgggcgggacgac 3448

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            ||||||||| || ||||||||| ||||||||||||||||||||||||||||| || || |
Sbjct: 3449 gcagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgcggacgcgc 3507

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            ||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| 
Sbjct: 3508 ccaccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatca 3567

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            |||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || ||||
Sbjct: 3568 tcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatgg 3627

                                              
Query: 280  agaagttctactgggctcccacccgtgacgaccg 313
            |||||||||||||||| |||||||| || |||||
Sbjct: 3628 agaagttctactgggcgcccacccgcgaggaccg 3661

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  549 bits (277), Expect = e-153
 Identities = 311/317 (98%), Gaps = 4/317 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
            ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 738  gtaccgtgaggctgcag-acatgatcaag-aagggtaag-atgtgctgcctcttcatcaa 794

                                                                        
Query: 61   cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 854

                                                                        
Query: 121  gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855  g-atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 913

                                                                        
Query: 181  gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
            ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914  gcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 973

                                                                        
Query: 241  cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974  cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 1033

                             
Query: 301  cccgtgacgaccgtatc 317
            |||||||||||||||||
Sbjct: 1034 cccgtgacgaccgtatc 1050

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  549 bits (277), Expect = e-153
 Identities = 311/317 (98%), Gaps = 4/317 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 483 gtaccgtgaggctgcag-acatgatcaag-aagggtaag-atgtgctgcctcttcatcaa 539

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 599

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 g-atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 658

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 718

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 778

                            
Query: 301 cccgtgacgaccgtatc 317
           |||||||||||||||||
Sbjct: 779 cccgtgacgaccgtatc 795

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  470 bits (237), Expect = e-129
 Identities = 301/317 (94%), Gaps = 4/317 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 658 gtaccgtgaggctgcag-acatgatcaag-aagggtaag-atgtgctgcctcttcatcaa 714

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           |||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 715 cgatcttgacgccggtgcgggtaggatgggcgggaccacacagtacaccgtcaacaacca 774

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct: 775 g-atggtgaacgccaccctcatgaacatcgccgatgcccccaccaatgtgcagctcccag 833

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 834 gcatgtacaacaaggaggagaacccacgtgtgcccatcgtcgtcactggtaacgatttct 893

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           ||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 cgacgttgtacgcccctctgatccgtgatggtcgtatggagaagttctactgggctccca 953

                            
Query: 301 cccgtgacgaccgtatc 317
           |||| ||||||||||||
Sbjct: 954 cccgcgacgaccgtatc 970

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  351 bits (177), Expect = 9e-94
 Identities = 286/317 (90%), Gaps = 4/317 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           |||||| ||||| |||| ||||||||||| ||||| ||| ||||||||||||||||||||
Sbjct: 669 gtaccgcgaggccgcag-acatgatcaag-aagggcaag-atgtgctgcctcttcatcaa 725

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           ||| || ||||| || |||||| |||||||||| ||||| ||||||||||| ||||||||
Sbjct: 726 cgacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgtgaacaacca 785

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | |||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
Sbjct: 786 g-atggtgaacgccaccctgatgaacatcgccgacgcgcccaccaacgtgcagctcccgg 844

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           | ||||||||||||||||||||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 845 ggatgtacaacaaggaggagaacccccgtgtccccatcatcgtcaccggcaacgacttct 904

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           ||||||| ||||| || || |||||||| |||||||||||||||||||||||||| ||||
Sbjct: 905 cgacgctgtacgcgcccctcatccgtgacggtcgtatggagaagttctactgggcgccca 964

                            
Query: 301 cccgtgacgaccgtatc 317
           |||| || |||||||||
Sbjct: 965 cccgcgaggaccgtatc 981

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
           insert sequence
          Length = 1691

 Score =  313 bits (158), Expect = 2e-82
 Identities = 279/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 662 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 718

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 719 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 778

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | ||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||
Sbjct: 779 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccctg 837

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 838 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 897

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 898 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 957

                         
Query: 301 cccgtgacgaccgt 314
           |||| |||||||||
Sbjct: 958 cccgcgacgaccgt 971

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  313 bits (158), Expect = 2e-82
 Identities = 246/274 (89%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||||||||||||||||||||| || ||||| || |||||  |||||||||| || ||
Sbjct: 820  gatgtgctgcctcttcatcaacgacctggacgccggcgcgggccggatgggcgggacgac 879

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            ||||||||| || ||||||||| ||||||||||||||||||||||||||||| || || |
Sbjct: 880  gcagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgcggacgcgc 938

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            ||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| 
Sbjct: 939  ccaccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatca 998

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            |||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || ||||
Sbjct: 999  tcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatgg 1058

                                              
Query: 280  agaagttctactgggctcccacccgtgacgaccg 313
            |||||||||||||||| |||||||| || |||||
Sbjct: 1059 agaagttctactgggcgcccacccgcgaggaccg 1092

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  307 bits (155), Expect = 1e-80
 Identities = 237/263 (90%), Gaps = 1/263 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||||||||||||||||||||||||| || || ||||| ||  |||||||||| |||||
Sbjct: 356 gatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcaccac 415

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||   ||
Sbjct: 416 ccagtacaccgtcaacaaccag-atggtgaacgccaccctcatgaacatcgccgacaacc 474

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           |||||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||| 
Sbjct: 475 ccaccaacgtccagctccccggcatgtacaacaagcaggagaacccccgcgtgcccatca 534

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| || |||||||| || || |||||||| ||||||||||
Sbjct: 535 tcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatgg 594

                                  
Query: 280 agaagttctactgggctcccacc 302
           |||||||||||||||||||||||
Sbjct: 595 agaagttctactgggctcccacc 617

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  307 bits (155), Expect = 1e-80
 Identities = 237/263 (90%), Gaps = 1/263 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||||||||||||||||||||||||| || || ||||| ||  |||||||||| |||||
Sbjct: 550 gatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcaccac 609

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||   ||
Sbjct: 610 ccagtacaccgtcaacaaccag-atggtgaacgccaccctcatgaacatcgccgacaacc 668

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           |||||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||| 
Sbjct: 669 ccaccaacgtccagctccccggcatgtacaacaagcaggagaacccccgcgtgcccatca 728

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| || |||||||| || || |||||||| ||||||||||
Sbjct: 729 tcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatgg 788

                                  
Query: 280 agaagttctactgggctcccacc 302
           |||||||||||||||||||||||
Sbjct: 789 agaagttctactgggctcccacc 811

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  305 bits (154), Expect = 5e-80
 Identities = 278/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
              |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 109086 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 109030

                                                                          
Query: 61     cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
              |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 109029 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 108970

                                                                          
Query: 121    gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
              | ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |
Sbjct: 108969 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccg 108911

                                                                          
Query: 181    gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
              | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 108910 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 108851

                                                                          
Query: 241    cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
              | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 108850 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 108791

                            
Query: 301    cccgtgacgaccgt 314
              |||| |||||||||
Sbjct: 108790 cccgcgacgaccgt 108777



 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                          
Query: 88     gggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaaca 147
              |||||| || ||||||||||| || ||||||||| ||||||||||| || ||||||||||
Sbjct: 112679 gggcggcacgacgcagtacacggtgaacaaccag-atggtgaacgcgacgctgatgaaca 112621

                                                          
Query: 148    tcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 191
              |||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 112620 tcgcggacaaccccaccaacgtgcagctcccagggatgtacaac 112577



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 276    atggagaagttctactgggctcccacccgtgacgaccg 313
              ||||| ||||||||||||||||||||||| || |||||
Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccg 112482

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  305 bits (154), Expect = 5e-80
 Identities = 278/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1     gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
             |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 30963 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 30907

                                                                         
Query: 61    cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
             |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 30906 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 30847

                                                                         
Query: 121   gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
             | ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |
Sbjct: 30846 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccg 30788

                                                                         
Query: 181   gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
             | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 30787 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 30728

                                                                         
Query: 241   cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
             | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 30727 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 30668

                           
Query: 301   cccgtgacgaccgt 314
             |||| |||||||||
Sbjct: 30667 cccgcgacgaccgt 30654



 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                         
Query: 88    gggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaaca 147
             |||||| || ||||||||||| || ||||||||| ||||||||||| || ||||||||||
Sbjct: 34556 gggcggcacgacgcagtacacggtgaacaaccag-atggtgaacgcgacgctgatgaaca 34498

                                                         
Query: 148   tcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 191
             |||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 34497 tcgcggacaaccccaccaacgtgcagctcccagggatgtacaac 34454



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 276   atggagaagttctactgggctcccacccgtgacgaccg 313
             ||||| ||||||||||||||||||||||| || |||||
Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccg 34359

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase (rca) mRNA, complete cds
          Length = 1675

 Score =  305 bits (154), Expect = 5e-80
 Identities = 278/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 631 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 687

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 688 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 747

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |
Sbjct: 748 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccg 806

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 807 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 866

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 867 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 926

                         
Query: 301 cccgtgacgaccgt 314
           |||| |||||||||
Sbjct: 927 cccgcgacgaccgt 940

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for
           ribulose-bisphosphate carboxylase activase large isoform
           precursor protein, complete cds, clone: 13YPR038
          Length = 1558

 Score =  305 bits (154), Expect = 5e-80
 Identities = 278/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 626 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 682

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 683 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 742

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |
Sbjct: 743 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccg 801

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 802 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 861

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 862 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 921

                         
Query: 301 cccgtgacgaccgt 314
           |||| |||||||||
Sbjct: 922 cccgcgacgaccgt 935

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  305 bits (154), Expect = 5e-80
 Identities = 278/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1        gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
                |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 28304225 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 28304169

                                                                            
Query: 61       cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
                |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 28304168 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 28304109

                                                                            
Query: 121      gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
                | ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |
Sbjct: 28304108 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccg 28304050

                                                                            
Query: 181      gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
                | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 28304049 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 28303990

                                                                            
Query: 241      cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
                | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 28303989 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 28303930

                              
Query: 301      cccgtgacgaccgt 314
                |||| |||||||||
Sbjct: 28303929 cccgcgacgaccgt 28303916



 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                            
Query: 88       gggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaaca 147
                |||||| || ||||||||||| || ||||||||| ||||||||||| || ||||||||||
Sbjct: 28307818 gggcggcacgacgcagtacacggtgaacaaccag-atggtgaacgcgacgctgatgaaca 28307760

                                                            
Query: 148      tcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 191
                |||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28307759 tcgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28307716



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 276      atggagaagttctactgggctcccacccgtgacgaccg 313
                ||||| ||||||||||||||||||||||| || |||||
Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccg 28307621



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 8        gaggctgcaggacatgatcaa 28
                |||||||||||||||||||||
Sbjct: 14763383 gaggctgcaggacatgatcaa 14763403

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
           insert sequence
          Length = 1721

 Score =  305 bits (154), Expect = 5e-80
 Identities = 278/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 674 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 730

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 731 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 790

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |
Sbjct: 791 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccg 849

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 850 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 909

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 910 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 969

                         
Query: 301 cccgtgacgaccgt 314
           |||| |||||||||
Sbjct: 970 cccgcgacgaccgt 983

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
           insert sequence
          Length = 1682

 Score =  305 bits (154), Expect = 5e-80
 Identities = 278/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 625 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 681

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 682 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 741

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |
Sbjct: 742 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccg 800

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 801 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 860

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 861 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 920

                         
Query: 301 cccgtgacgaccgt 314
           |||| |||||||||
Sbjct: 921 cccgcgacgaccgt 934

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
           insert sequence
          Length = 1680

 Score =  305 bits (154), Expect = 5e-80
 Identities = 278/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 663 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 719

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 720 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 779

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |
Sbjct: 780 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccg 838

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 839 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 898

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 899 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 958

                         
Query: 301 cccgtgacgaccgt 314
           |||| |||||||||
Sbjct: 959 cccgcgacgaccgt 972

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  305 bits (154), Expect = 5e-80
 Identities = 278/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 446 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 502

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 503 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 562

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |
Sbjct: 563 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccg 621

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 622 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 681

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 682 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 741

                         
Query: 301 cccgtgacgaccgt 314
           |||| |||||||||
Sbjct: 742 cccgcgacgaccgt 755

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  305 bits (154), Expect = 5e-80
 Identities = 278/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1        gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
                |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 28286674 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 28286618

                                                                            
Query: 61       cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
                |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 28286617 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 28286558

                                                                            
Query: 121      gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
                | ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |
Sbjct: 28286557 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccg 28286499

                                                                            
Query: 181      gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
                | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 28286498 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 28286439

                                                                            
Query: 241      cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
                | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 28286438 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 28286379

                              
Query: 301      cccgtgacgaccgt 314
                |||| |||||||||
Sbjct: 28286378 cccgcgacgaccgt 28286365



 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                            
Query: 88       gggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaaca 147
                |||||| || ||||||||||| || ||||||||| ||||||||||| || ||||||||||
Sbjct: 28290267 gggcggcacgacgcagtacacggtgaacaaccag-atggtgaacgcgacgctgatgaaca 28290209

                                                            
Query: 148      tcgccgatgcccccaccaacgtgcagctccctggcatgtacaac 191
                |||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28290208 tcgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28290165



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 276      atggagaagttctactgggctcccacccgtgacgaccg 313
                ||||| ||||||||||||||||||||||| || |||||
Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccg 28290070



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 8        gaggctgcaggacatgatcaa 28
                |||||||||||||||||||||
Sbjct: 14843820 gaggctgcaggacatgatcaa 14843840

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
           precursor, complete cds
          Length = 1706

 Score =  305 bits (154), Expect = 5e-80
 Identities = 278/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 667 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 723

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 724 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 783

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |
Sbjct: 784 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccg 842

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 843 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 902

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 903 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 962

                         
Query: 301 cccgtgacgaccgt 314
           |||| |||||||||
Sbjct: 963 cccgcgacgaccgt 976

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
           precursor, complete cds
          Length = 1623

 Score =  305 bits (154), Expect = 5e-80
 Identities = 278/314 (88%), Gaps = 4/314 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           |||||||||||| |||| |||| |||||| ||||| ||| ||||||||||||||||||||
Sbjct: 661 gtaccgtgaggcggcag-acatcatcaag-aaggggaag-atgtgctgcctcttcatcaa 717

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || ||||||||
Sbjct: 718 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaacca 777

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | ||||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |
Sbjct: 778 g-atggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccg 836

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           | ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||
Sbjct: 837 ggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttct 896

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           | ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||||
Sbjct: 897 ccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctccca 956

                         
Query: 301 cccgtgacgaccgt 314
           |||| |||||||||
Sbjct: 957 cccgcgacgaccgt 970

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  299 bits (151), Expect = 3e-78
 Identities = 236/263 (89%), Gaps = 1/263 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||||||||||||||||||||||||| || || ||||| ||  |||||||||| |||||
Sbjct: 657 gatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcaccac 716

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||   ||
Sbjct: 717 ccagtacaccgtcaacaaccag-atggtgaacgccaccctcatgaacatcgccgacaacc 775

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           |||||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||| 
Sbjct: 776 ccaccaacgtccagctccccggcatgtacaacaagcaagagaacccccgcgtgcccatca 835

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| || |||||||| || || |||||||| ||||||||||
Sbjct: 836 tcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatgg 895

                                  
Query: 280 agaagttctactgggctcccacc 302
           |||||||||||||||||||||||
Sbjct: 896 agaagttctactgggctcccacc 918

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  299 bits (151), Expect = 3e-78
 Identities = 236/263 (89%), Gaps = 1/263 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||||||||||||||||||||||||| || || ||||| ||  |||||||||| |||||
Sbjct: 520 gatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcaccac 579

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||   ||
Sbjct: 580 ccagtacaccgtcaacaaccag-atggtgaacgccaccctcatgaacatcgccgacaacc 638

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           |||||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||| 
Sbjct: 639 ccaccaacgtccagctccccggcatgtacaacaagcaagagaacccccgcgtgcccatca 698

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| || |||||||| || || |||||||| ||||||||||
Sbjct: 699 tcgtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatgg 758

                                  
Query: 280 agaagttctactgggctcccacc 302
           |||||||||||||||||||||||
Sbjct: 759 agaagttctactgggctcccacc 781

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  297 bits (150), Expect = 1e-77
 Identities = 279/317 (88%), Gaps = 4/317 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           |||||| ||||| |||| ||||||||||| ||||| ||| ||||||||||||||||||||
Sbjct: 679 gtaccgcgaggccgcag-acatgatcaag-aagggcaag-atgtgctgcctcttcatcaa 735

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           ||| || ||||| || |||||| |||||||||| ||||| ||||||||||| ||||||||
Sbjct: 736 cgacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgtgaacaacca 795

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
           | |||||||||||||||||||||||||||||||| || ||||||||||||||||| || |
Sbjct: 796 g-atggtgaacgccaccctgatgaacatcgccgacgcgcccaccaacgtgcagcttccgg 854

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           | ||||||||||||||||||||||||||||| |||||  | |||||||| ||||| || |
Sbjct: 855 ggatgtacaacaaggaggagaacccccgtgttcccattatngtcaccggcaacgactttt 914

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           ||||||| ||||| || || || | ||| ||||||||||||||||| |||||||| ||||
Sbjct: 915 cgacgctgtacgccccccttattcctgacggtcgtatggagaagttttactgggcgccca 974

                            
Query: 301 cccgtgacgaccgtatc 317
           |||| || |||||||||
Sbjct: 975 cccgcgaggaccgtatc 991

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B
           (RcaB) mRNA, complete cds; nuclear gene for chloroplast
           product
          Length = 1525

 Score =  274 bits (138), Expect = 2e-70
 Identities = 241/274 (87%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           |||||||||||||||||||||||| || ||||| || |||||  |||||||||| || ||
Sbjct: 670 gatgtgctgcctcttcatcaacgacctggacgccggcgcggggcggatgggcgggacgac 729

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
           ||||||||| || ||||||||| ||||||||||||||||||||||||||||| || || |
Sbjct: 730 gcagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgcggacgcgc 788

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           |||||||||||||| |||| || ||||||||||||||||||||||| || ||||||||| 
Sbjct: 789 ccaccaacgtgcagttcccggggatgtacaacaaggaggagaacccacgcgtgcccatca 848

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||||||||| ||||| || || ||||| || || || ||||
Sbjct: 849 tcgtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgggacggccgcatgg 908

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           |||||||||||||||| |||||||| || |||||
Sbjct: 909 agaagttctactgggcgcccacccgggaggaccg 942

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  258 bits (130), Expect = 1e-65
 Identities = 239/274 (87%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| ||||||||||||||||||  | ||||| || |||||| | |||||||| |||||
Sbjct: 276 gatgtcctgcctcttcatcaacgacttggacgccggcgcgggtcgcatgggcggcaccac 335

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||   ||
Sbjct: 336 ccagtacacggtgaacaaccag-atggtcaacgccaccctgatgaacatcgccgacaacc 394

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||| 
Sbjct: 395 ccaccaacgtgcagctcccggggatgtacaacaaggaggacaacccccgcgtgcccatca 454

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||||||||| || || ||||| || || || ||||
Sbjct: 455 tcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatgg 514

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           |||||||||||||||| |||||||| || |||||
Sbjct: 515 agaagttctactgggcgcccacccgcgaggaccg 548

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
           precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  258 bits (130), Expect = 1e-65
 Identities = 239/274 (87%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| ||||||||||||||||||  | ||||| || |||||| | |||||||| |||||
Sbjct: 671 gatgtcctgcctcttcatcaacgacttggacgccggcgcgggtcgcatgggcggcaccac 730

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||   ||
Sbjct: 731 ccagtacacggtgaacaaccag-atggtcaacgccaccctgatgaacatcgccgacaacc 789

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||| 
Sbjct: 790 ccaccaacgtgcagctcccggggatgtacaacaaggaggacaacccccgcgtgcccatca 849

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||||||||| || || ||||| || || || ||||
Sbjct: 850 tcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatgg 909

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           |||||||||||||||| |||||||| || |||||
Sbjct: 910 agaagttctactgggcgcccacccgcgaggaccg 943

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  242 bits (122), Expect = 6e-61
 Identities = 237/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 231 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 290

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 291 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 349

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 350 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 409

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||
Sbjct: 410 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 469

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 470 acaagttctactgggcgcccacccgcgacgaccg 503

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  242 bits (122), Expect = 6e-61
 Identities = 237/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 233 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 292

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 293 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 351

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 352 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 411

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||
Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 471

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccg 505

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  242 bits (122), Expect = 6e-61
 Identities = 237/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 237 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 296

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 297 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 355

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 356 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 415

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||
Sbjct: 416 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 475

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 476 acaagttctactgggcgcccacccgcgacgaccg 509

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  242 bits (122), Expect = 6e-61
 Identities = 237/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 233 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 292

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 293 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 351

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 352 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 411

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||
Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 471

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccg 505

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  242 bits (122), Expect = 6e-61
 Identities = 237/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 233 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 292

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 293 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 351

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 352 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 411

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||
Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 471

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccg 505

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  242 bits (122), Expect = 6e-61
 Identities = 237/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 233 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 292

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 293 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 351

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 352 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 411

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||
Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 471

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccg 505

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  242 bits (122), Expect = 6e-61
 Identities = 237/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 233 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 292

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 293 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 351

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 352 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 411

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||
Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 471

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccg 505

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  242 bits (122), Expect = 6e-61
 Identities = 237/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 235 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 294

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 295 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 353

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 354 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 413

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||
Sbjct: 414 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatgg 473

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 474 acaagttctactgggcgcccacccgcgacgaccg 507

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 1 mRNA, complete cds
          Length = 1559

 Score =  238 bits (120), Expect = 9e-60
 Identities = 259/302 (85%), Gaps = 4/302 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaccgtgaggctgcaggacatgatcaagcaagggtaaggatgtgctgcctcttcatcaa 60
           |||||||||||| || | |||| |||||| ||||| ||  ||||| |||||||| |||||
Sbjct: 696 gtaccgtgaggccgccg-acattatcaagaaagggaaa--atgtgttgcctctttatcaa 752

                                                                       
Query: 61  cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaacca 120
           |||||| |||||||| || ||| | ||||| |||||||| || ||||| || ||||||||
Sbjct: 753 cgatctcgacgctggagccggtcgtatgggaggaaccacacaatacacagtgaacaacca 812

                                                                       
Query: 121 gnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctg 180
             |||||||||||||| || ||||||||||| |||  |||||||||||| |||||||| |
Sbjct: 813 -aatggtgaacgccacactcatgaacatcgctgataaccccaccaacgttcagctccccg 871

                                                                       
Query: 181 gcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttct 240
           | |||||||||||||| |||||||| ||||| || ||| | |||||||||||||||||||
Sbjct: 872 gtatgtacaacaaggaagagaaccctcgtgttccgatcattgtcaccggtaacgatttct 931

                                                                       
Query: 241 cgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccca 300
           ||||||| ||||| || || |||||||| ||||||||||||||||| |||||||| ||||
Sbjct: 932 cgacgctgtacgcgccgctcatccgtgacggtcgtatggagaagttttactgggcaccca 991

             
Query: 301 cc 302
           ||
Sbjct: 992 cc 993

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  236 bits (119), Expect = 3e-59
 Identities = 235/274 (85%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||||||||||||||||||||||  | ||||| || |||||| | |||||||| |||||
Sbjct: 671 gatgtgctgcctcttcatcaacgacttggacgccggcgcgggtcgcatgggcggcaccac 730

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||| ||||||||||||||||||||||||||   ||
Sbjct: 731 ccagtacacggtgaacaaccag-atggtcaacgccaccctgatgaacatcgccgacaacc 789

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||||||||||||| ||     | ||||||||| 
Sbjct: 790 ccaccaacgtgcagctcccggggatgtacaacaaggaggacaannnnngcgtgcccatca 849

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||||||||| || || ||||| || || || ||||
Sbjct: 850 tcgtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatgg 909

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           |||||||||||||||| |||||||| || |||||
Sbjct: 910 agaagttctactgggcgcccacccgcgaggaccg 943

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  234 bits (118), Expect = 1e-58
 Identities = 239/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||| || ||||||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 837  gatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 896

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
             |||||||| |||||||||||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 897  tcagtacactgtcaacaaccag-atggttaacgcaacactcatgaacattgctgataacc 955

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            | |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 956  caaccaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 1015

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            |   ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 1016 tttgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatgg 1075

                                                  
Query: 280  agaagttctactgggctcccacccgtgacgaccgtatc 317
            |||||||||||||||| || |||||||| |||||||||
Sbjct: 1076 agaagttctactgggccccgacccgtgaagaccgtatc 1113

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  234 bits (118), Expect = 1e-58
 Identities = 239/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||| || ||||||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 837  gatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 896

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
             |||||||| |||||||||||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 897  tcagtacactgtcaacaaccag-atggttaacgcaacactcatgaacattgctgataacc 955

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            | |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 956  caaccaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 1015

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            |   ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 1016 tttgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatgg 1075

                                                  
Query: 280  agaagttctactgggctcccacccgtgacgaccgtatc 317
            |||||||||||||||| || |||||||| |||||||||
Sbjct: 1076 agaagttctactgggccccgacccgtgaagaccgtatc 1113

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  234 bits (118), Expect = 1e-58
 Identities = 239/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||| || ||||||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 866  gatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 925

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
             |||||||| |||||||||||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 926  tcagtacactgtcaacaaccag-atggttaacgcaacactcatgaacattgctgataacc 984

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            | |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 985  caaccaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 1044

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            |   ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 1045 tttgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatgg 1104

                                                  
Query: 280  agaagttctactgggctcccacccgtgacgaccgtatc 317
            |||||||||||||||| || |||||||| |||||||||
Sbjct: 1105 agaagttctactgggccccgacccgtgaagaccgtatc 1142

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  234 bits (118), Expect = 1e-58
 Identities = 239/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||| || ||||||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 748  gatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 807

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
             |||||||| |||||||||||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 808  tcagtacactgtcaacaaccag-atggttaacgcaacactcatgaacattgctgataacc 866

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            | |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 867  caaccaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 926

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            |   ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 927  tttgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatgg 986

                                                  
Query: 280  agaagttctactgggctcccacccgtgacgaccgtatc 317
            |||||||||||||||| || |||||||| |||||||||
Sbjct: 987  agaagttctactgggccccgacccgtgaagaccgtatc 1024

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  234 bits (118), Expect = 1e-58
 Identities = 236/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 217 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 276

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 277 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 335

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||||
Sbjct: 336 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcg 395

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || || || || || || ||||
Sbjct: 396 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcattcgcgacgggcgcatgg 455

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 456 acaagttctactgggcgcccacccgcgacgaccg 489

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  234 bits (118), Expect = 1e-58
 Identities = 236/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 235 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 294

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 295 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 353

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 354 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 413

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||
Sbjct: 414 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 473

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 474 acaagttctactgggcgcccacccgcgacgaccg 507

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  234 bits (118), Expect = 1e-58
 Identities = 236/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 233 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 292

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 293 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 351

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 352 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 411

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||
Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 471

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccg 505

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  234 bits (118), Expect = 1e-58
 Identities = 236/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 231 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 290

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 291 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 349

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 350 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 409

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||
Sbjct: 410 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 469

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 470 acaagttctactgggcgcccacccgcgacgaccg 503

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  234 bits (118), Expect = 1e-58
 Identities = 236/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 231 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 290

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 291 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 349

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 350 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 409

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||
Sbjct: 410 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 469

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 470 acaagttctactgggcgcccacccgcgacgaccg 503

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  234 bits (118), Expect = 1e-58
 Identities = 236/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 225 gatgtcctgcctgttcatcaacgatctggacgccggcgcaggccgcatgggcggcaccac 284

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 285 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 343

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||||
Sbjct: 344 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcg 403

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||
Sbjct: 404 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 463

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| || |||||
Sbjct: 464 acaagttctactgggcgcccacccgggaggaccg 497

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  234 bits (118), Expect = 1e-58
 Identities = 236/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 233 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 292

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 293 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 351

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 352 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 411

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||
Sbjct: 412 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 471

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 472 acaagttctactgggcgcccacccgcgacgaccg 505

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  234 bits (118), Expect = 1e-58
 Identities = 236/274 (86%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           ||||| |||||| |||||||||||||| ||||| || || ||  | |||||||| |||||
Sbjct: 237 gatgtcctgcctgttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccac 296

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| || ||||||||| ||||||||||||||||||||||||||||||||   ||
Sbjct: 297 ccagtacacggtgaacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacc 355

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| 
Sbjct: 356 ccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatca 415

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |||||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||
Sbjct: 416 tcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatgg 475

                                             
Query: 280 agaagttctactgggctcccacccgtgacgaccg 313
           | |||||||||||||| |||||||| ||||||||
Sbjct: 476 acaagttctactgggcgcccacccgcgacgaccg 509

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  234 bits (118), Expect = 1e-58
 Identities = 239/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Minus

                                                                         
Query: 40    gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
             |||||| || ||||||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 14451 gatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 14392

                                                                         
Query: 100   gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
              |||||||| |||||||||||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 14391 tcagtacactgtcaacaaccag-atggttaacgcaacactcatgaacattgctgataacc 14333

                                                                         
Query: 160   ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
             | |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 14332 caaccaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 14273

                                                                         
Query: 220   tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
             |   ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 14272 tttgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatgg 14213

                                                   
Query: 280   agaagttctactgggctcccacccgtgacgaccgtatc 317
             |||||||||||||||| || |||||||| |||||||||
Sbjct: 14212 agaagttctactgggccccgacccgtgaagaccgtatc 14175

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  234 bits (118), Expect = 1e-58
 Identities = 239/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||| || ||||||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 751  gatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 810

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
             |||||||| |||||||||||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 811  tcagtacactgtcaacaaccag-atggttaacgcaacactcatgaacattgctgataacc 869

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            | |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 870  caaccaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 929

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            |   ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 930  tttgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatgg 989

                                                  
Query: 280  agaagttctactgggctcccacccgtgacgaccgtatc 317
            |||||||||||||||| || |||||||| |||||||||
Sbjct: 990  agaagttctactgggccccgacccgtgaagaccgtatc 1027

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  234 bits (118), Expect = 1e-58
 Identities = 239/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||| || ||||||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 748  gatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 807

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
             |||||||| |||||||||||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 808  tcagtacactgtcaacaaccag-atggttaacgcaacactcatgaacattgctgataacc 866

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            | |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 867  caaccaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 926

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            |   ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 927  tttgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatgg 986

                                                  
Query: 280  agaagttctactgggctcccacccgtgacgaccgtatc 317
            |||||||||||||||| || |||||||| |||||||||
Sbjct: 987  agaagttctactgggccccgacccgtgaagaccgtatc 1024

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  234 bits (118), Expect = 1e-58
 Identities = 239/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||| || ||||||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 751  gatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 810

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
             |||||||| |||||||||||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 811  tcagtacactgtcaacaaccag-atggttaacgcaacactcatgaacattgctgataacc 869

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            | |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 870  caaccaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 929

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            |   ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 930  tttgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatgg 989

                                                  
Query: 280  agaagttctactgggctcccacccgtgacgaccgtatc 317
            |||||||||||||||| || |||||||| |||||||||
Sbjct: 990  agaagttctactgggccccgacccgtgaagaccgtatc 1027

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  234 bits (118), Expect = 1e-58
 Identities = 239/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||| || ||||||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 2832 gatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 2891

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
             |||||||| |||||||||||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 2892 tcagtacactgtcaacaaccag-atggttaacgcaacactcatgaacattgctgataacc 2950

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            | |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 2951 caaccaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 3010

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            |   ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 3011 tttgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatgg 3070

                                                  
Query: 280  agaagttctactgggctcccacccgtgacgaccgtatc 317
            |||||||||||||||| || |||||||| |||||||||
Sbjct: 3071 agaagttctactgggccccgacccgtgaagaccgtatc 3108

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  232 bits (117), Expect = 5e-58
 Identities = 229/265 (86%), Gaps = 1/265 (0%)
 Strand = Plus / Plus

                                                                       
Query: 53  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 112
           ||||| || ||||| || |||||||| ||| | ||||| |||||||| || |||||||||
Sbjct: 560 ttcattaatgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacaccgtc 619

                                                                       
Query: 113 aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 172
           ||||||||| ||||| ||||| ||||| |||||||||||||||  |||||||||||| ||
Sbjct: 620 aacaaccag-atggttaacgctaccctcatgaacatcgccgataaccccaccaacgtcca 678

                                                                       
Query: 173 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 232
           |||||| || |||||||||||||| |||||||||||||| |||||| ||||||| |||||
Sbjct: 679 gctccccggtatgtacaacaaggaagagaacccccgtgtccccatcatcgtcactggtaa 738

                                                                       
Query: 233 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 292
           ||||||||| || || || |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 739 cgatttctccacactgtatgctcctctcatccgtgacggtcgtatggagaaattttactg 798

                                    
Query: 293 ggctcccacccgtgacgaccgtatc 317
           ||| || ||  | ||||||||||||
Sbjct: 799 ggcaccaactagggacgaccgtatc 823

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  228 bits (115), Expect = 9e-57
 Identities = 215/247 (87%), Gaps = 1/247 (0%)
 Strand = Plus / Plus

                                                                       
Query: 49  cctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 108
           ||||||||| |||||||| || |||||||| ||| | ||||| |||||||| || |||||
Sbjct: 555 cctcttcattaacgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacac 614

                                                                       
Query: 109 cgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacg 168
           ||||||||||||| ||||| || || ||||| |||||||||||||||  |||||||||||
Sbjct: 615 cgtcaacaaccag-atggttaatgctaccctcatgaacatcgccgataaccccaccaacg 673

                                                                       
Query: 169 tgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccg 228
           | |||||||| || |||||||||||||| |||||||||||||| |||||  ||||||| |
Sbjct: 674 tccagctccccggtatgtacaacaaggaagagaacccccgtgtccccattatcgtcactg 733

                                                                       
Query: 229 gtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttct 288
           ||||||||||||| || || || |||||||| |||||||| |||||||||||||| || |
Sbjct: 734 gtaacgatttctccacactgtatgctcctctcatccgtgacggtcgtatggagaaatttt 793

                  
Query: 289 actgggc 295
           |||||||
Sbjct: 794 actgggc 800

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  226 bits (114), Expect = 3e-56
 Identities = 238/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           |||||| || ||| ||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 663 gatgtgttgtctcctcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 722

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| |||||||||||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 723 tcagtacactgtcaacaaccag-atggttaacgcaacactcatgaacattgctgataacc 781

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           | |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 782 caaccaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 841

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |   ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 842 tttgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatgg 901

                                                 
Query: 280 agaagttctactgggctcccacccgtgacgaccgtatc 317
           |||||||||||||||| || |||||||| |||||||||
Sbjct: 902 agaagttctactgggccccgacccgtgaagaccgtatc 939

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  226 bits (114), Expect = 3e-56
 Identities = 238/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||| || ||||||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 740  gatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 799

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
             |||||||| |||||||||||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 800  tcagtacactgtcaacaaccag-atggttaacgcaacactcatgaacattgctgataacc 858

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            | |||||||| ||||| || || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 859  caaccaacgtccagcttccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 918

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            |   ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 919  tttgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatgg 978

                                                  
Query: 280  agaagttctactgggctcccacccgtgacgaccgtatc 317
            |||||||||||||||| || |||||||| |||||||||
Sbjct: 979  agaagttctactgggccccgacccgtgaagaccgtatc 1016

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  226 bits (114), Expect = 3e-56
 Identities = 238/278 (85%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||| || ||||||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 866  gatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 925

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
             |||||||| |||||||| ||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 926  tcagtacactgtcaacaatcag-atggttaacgcaacactcatgaacattgctgataacc 984

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            | |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 985  caaccaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 1044

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            |   ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 1045 tttgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatgg 1104

                                                  
Query: 280  agaagttctactgggctcccacccgtgacgaccgtatc 317
            |||||||||||||||| || |||||||| |||||||||
Sbjct: 1105 agaagttctactgggccccgacccgtgaagaccgtatc 1142

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  224 bits (113), Expect = 1e-55
 Identities = 170/189 (89%)
 Strand = Plus / Plus

                                                                       
Query: 126 gtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatg 185
           |||||||||||||||||||||||||||||   ||| ||||||||||||||||| || |||
Sbjct: 1   gtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatg 60

                                                                       
Query: 186 tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 245
           |||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| |||
Sbjct: 61  tacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacg 120

                                                                       
Query: 246 ctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgt 305
           || ||||| || || |||||||| || |||||||||||||||||||||||||||||||| 
Sbjct: 121 ctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgc 180

                    
Query: 306 gacgaccgt 314
           |||||||||
Sbjct: 181 gacgaccgt 189

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score =  222 bits (112), Expect = 5e-55
 Identities = 220/255 (86%), Gaps = 1/255 (0%)
 Strand = Plus / Plus

                                                                        
Query: 50   ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 109
            |||||||||||||||||||| || || || ||| || | || |||||||| || ||||| 
Sbjct: 758  ctcttcatcaacgatcttgatgcaggagctggtcggcttggtggaaccacccaatacact 817

                                                                        
Query: 110  gtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgt 169
            |||||||||||  |||||||| |||||||| |||||||| || |||  ||| || |||||
Sbjct: 818  gtcaacaacca-aatggtgaatgccaccctcatgaacattgctgataacccgacaaacgt 876

                                                                        
Query: 170  gcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccgg 229
             ||||| || || ||||||||||||||||||||||||||||| || ||| | ||||||||
Sbjct: 877  ccagcttccaggtatgtacaacaaggaggagaacccccgtgtcccaatcattgtcaccgg 936

                                                                        
Query: 230  taacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttcta 289
            |||||||||||| ||  | ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 937  taacgatttctcaacattgtacgctcctctcatccgtgacggtcgtatggagaagttcta 996

                           
Query: 290  ctgggctcccacccg 304
            |||||||||||||||
Sbjct: 997  ctgggctcccacccg 1011

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  216 bits (109), Expect = 3e-53
 Identities = 227/265 (85%), Gaps = 1/265 (0%)
 Strand = Plus / Plus

                                                                        
Query: 53   ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 112
            |||||||||||||| ||||| ||||| ||  | ||||| || ||||| || |||||||| 
Sbjct: 800  ttcatcaacgatctcgacgcgggtgctggacgtatgggaggcaccacacaatacaccgtg 859

                                                                        
Query: 113  aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 172
            ||||||||| ||||| ||||||||||| |||||||| || ||   ||||||||| || ||
Sbjct: 860  aacaaccag-atggttaacgccaccctcatgaacattgctgacaaccccaccaatgtcca 918

                                                                        
Query: 173  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 232
             |||||||| |||||||||||| | |||||| ||||||| |||||  ||||||| |||||
Sbjct: 919  actccctggtatgtacaacaagcaagagaacgcccgtgttcccattatcgtcactggtaa 978

                                                                        
Query: 233  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 292
            ||| ||||| ||  | |||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 979  cgacttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctactg 1038

                                     
Query: 293  ggctcccacccgtgacgaccgtatc 317
            ||||||||||||||| |||||||||
Sbjct: 1039 ggctcccacccgtgaggaccgtatc 1063

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  206 bits (104), Expect = 3e-50
 Identities = 234/276 (84%), Gaps = 1/276 (0%)
 Strand = Plus / Plus

                                                                        
Query: 41   atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 100
            ||||||||||| |||||||||||||| |||||||| || ||| | ||||| ||||| || 
Sbjct: 733  atgtgctgcctgttcatcaacgatctcgacgctggagctggtcgtatgggtggaacaact 792

                                                                        
Query: 101  cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 160
            || ||||| || ||||||||| |||||||| |||||||| |||||||| || ||   |||
Sbjct: 793  caatacactgttaacaaccag-atggtgaatgccaccctcatgaacattgctgacaaccc 851

                                                                        
Query: 161  caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 220
             || || || ||||||||||| |||||||||||||| |||||||| |||||||| ||| |
Sbjct: 852  aacaaatgtccagctccctggtatgtacaacaaggaagagaaccctcgtgtgcctatcat 911

                                                                        
Query: 221  cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 280
             ||||| |||||||| ||||||||  | ||||||||||| ||||||||||||||||||||
Sbjct: 912  tgtcactggtaacgacttctcgacattgtacgctcctcttatccgtgatggtcgtatgga 971

                                                
Query: 281  gaagttctactgggctcccacccgtgacgaccgtat 316
             || |||||||||||||| ||| | || ||||||||
Sbjct: 972  aaaattctactgggctcctaccagggaagaccgtat 1007

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score =  194 bits (98), Expect = 1e-46
 Identities = 219/258 (84%), Gaps = 1/258 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 100
           ||||||||| | ||||||||||||||||| |||||||| ||||| ||||| ||||| || 
Sbjct: 163 atgtgctgcttgttcatcaacgatcttgatgctggtgcaggtagaatgggaggaactaca 222

                                                                       
Query: 101 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 160
           || ||||| |||||||| ||| ||||| || || || || |||||||| || |||  |||
Sbjct: 223 caatacacagtcaacaatcag-atggttaatgctacactcatgaacattgctgataaccc 281

                                                                       
Query: 161 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 220
            ||||| || || |||||||| |||||| ||||||||||||||||||||||||||||| |
Sbjct: 282 aaccaatgtccaactccctggaatgtacgacaaggaggagaacccccgtgtgcccatcat 341

                                                                       
Query: 221 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 280
           |||||| || |||||||||||  | || || ||||| || ||||| ||||||||||||||
Sbjct: 342 cgtcacaggaaacgatttctcagcactatatgctccccttatccgcgatggtcgtatgga 401

                             
Query: 281 gaagttctactgggctcc 298
            |||||||||||||||||
Sbjct: 402 aaagttctactgggctcc 419

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  190 bits (96), Expect = 2e-45
 Identities = 114/120 (95%)
 Strand = Plus / Plus

                                                                       
Query: 198 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 257
           |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 1   gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60

                                                                       
Query: 258 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 317
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatc 120

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score =  190 bits (96), Expect = 2e-45
 Identities = 219/259 (84%), Gaps = 1/259 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           |||||| || || |||||||||||||| || || || || ||| | ||||| ||||||||
Sbjct: 170 gatgtgttgtctgttcatcaacgatctcgatgcaggagcaggtcgtatgggtggaaccac 229

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            || ||||| |||||||||||  |||||||| ||||| || |||||||| || |||  ||
Sbjct: 230 acaatacactgtcaacaacca-aatggtgaatgccacactcatgaacattgctgataacc 288

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           ||||||| || || |||||||| |||||||||||||| || ||  | |||||||||||| 
Sbjct: 289 ccaccaatgtccaactccctggtatgtacaacaaggaagacaatgctcgtgtgcccatca 348

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           | ||||||||||| |||||||| || || || |||||||| |||||||||||||||||||
Sbjct: 349 ttgtcaccggtaatgatttctcaacactttatgctcctctcatccgtgatggtcgtatgg 408

                              
Query: 280 agaagttctactgggctcc 298
           |||||||||||||||||||
Sbjct: 409 agaagttctactgggctcc 427

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  182 bits (92), Expect = 5e-43
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 92  ggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgc 151
           |||||||| || ||||| || ||||||||| |||||||| ||||| || |||||||| ||
Sbjct: 789 ggaaccacccaatacactgtgaacaaccag-atggtgaatgccactctcatgaacattgc 847

                                                                       
Query: 152 cgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgt 211
            |||  |||||| || |||||||| ||||| |||||||||||||| || ||| |||||||
Sbjct: 848 tgataaccccacaaatgtgcagcttcctggtatgtacaacaaggaagataacgcccgtgt 907

                                                                       
Query: 212 gcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatgg 271
           ||||||| | ||||| |||||||||||||| || || || |||||||| |||||||||||
Sbjct: 908 gcccatcattgtcactggtaacgatttctcaacactttatgctcctctcatccgtgatgg 967

                                   
Query: 272 tcgtatggagaagttctactgggc 295
           ||||||||||||||||||||||||
Sbjct: 968 tcgtatggagaagttctactgggc 991

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  180 bits (91), Expect = 2e-42
 Identities = 206/243 (84%), Gaps = 1/243 (0%)
 Strand = Plus / Plus

                                                                       
Query: 53  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 112
           ||||||||||||||||| || || || ||| |  | || |||||||| || ||||| || 
Sbjct: 754 ttcatcaacgatcttgatgcaggagcaggtcgtcttggtggaaccacccaatacactgtg 813

                                                                       
Query: 113 aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 172
           ||||||||| |||||||| ||||| || |||||||| || |||  ||| || || |||||
Sbjct: 814 aacaaccag-atggtgaatgccactctcatgaacattgctgataaccctacaaatgtgca 872

                                                                       
Query: 173 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 232
           ||| ||||| |||||||||||||| |||||| |||||||||||||| | |||||||||||
Sbjct: 873 gcttcctggtatgtacaacaaggaagagaacgcccgtgtgcccatcattgtcaccggtaa 932

                                                                       
Query: 233 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 292
            |||||||| ||||| || |||||||| || |||||||| ||||||||||||||||||||
Sbjct: 933 tgatttctcaacgctgtatgctcctctcattcgtgatgggcgtatggagaagttctactg 992

              
Query: 293 ggc 295
           |||
Sbjct: 993 ggc 995

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score =  176 bits (89), Expect = 3e-41
 Identities = 210/249 (84%), Gaps = 1/249 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
           |||||| || ||||||||||||||||||||||||||||||||| | ||||| || || ||
Sbjct: 732 gatgtgttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactac 791

                                                                       
Query: 100 gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
            |||||||| |||||||||||| ||||| ||||| || || |||||||| || |||  ||
Sbjct: 792 tcagtacactgtcaacaaccag-atggttaacgcaacactcatgaacattgctgataacc 850

                                                                       
Query: 160 ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
           | |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| 
Sbjct: 851 caaccaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatca 910

                                                                       
Query: 220 tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
           |   ||| |||||||||||||| ||  | |||| |||||| |||| |||||| |||||||
Sbjct: 911 tttgcactggtaacgatttctccaccttatacggtcctctcatccttgatggacgtatgg 970

                    
Query: 280 agaagttct 288
           |||||||||
Sbjct: 971 agaagttct 979

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  174 bits (88), Expect = 1e-40
 Identities = 221/264 (83%), Gaps = 1/264 (0%)
 Strand = Plus / Plus

                                                                        
Query: 53   ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 112
            |||||||||||||| ||  | ||||| ||  | ||||| || ||||| || |||||||| 
Sbjct: 2542 ttcatcaacgatctggaacccggtgctggacgtatgggaggcaccacccaatacaccgta 2601

                                                                        
Query: 113  aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 172
            ||||||||| ||||| |||||||| || |||||||| || ||   ||| ||||| || ||
Sbjct: 2602 aacaaccag-atggttaacgccacactcatgaacattgctgacaacccaaccaatgtcca 2660

                                                                        
Query: 173  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 232
             |||||||| |||||||||||| |||| ||  ||||||| |||||| | || || |||||
Sbjct: 2661 actccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgttactggtaa 2720

                                                                        
Query: 233  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 292
            ||||||||| ||  | |||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 2721 cgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctactg 2780

                                    
Query: 293  ggctcccacccgtgacgaccgtat 316
            ||||||||||||||| ||||||||
Sbjct: 2781 ggctcccacccgtgaggaccgtat 2804

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  167 bits (84), Expect = 3e-38
 Identities = 220/264 (83%), Gaps = 1/264 (0%)
 Strand = Plus / Plus

                                                                        
Query: 53   ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 112
            |||||||||||||| ||  | ||||| ||  | ||||| || ||||| || |||||||| 
Sbjct: 914  ttcatcaacgatctggaacccggtgctggacgtatgggaggcaccacccaatacaccgta 973

                                                                        
Query: 113  aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 172
            ||||||||| ||||| |||||||| ||  ||||||| || ||   ||| ||||| || ||
Sbjct: 974  aacaaccag-atggttaacgccacactcctgaacattgctgacaacccaaccaatgtcca 1032

                                                                        
Query: 173  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 232
             |||||||| |||||||||||| |||| ||  ||||||| |||||| | || || |||||
Sbjct: 1033 actccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgttactggtaa 1092

                                                                        
Query: 233  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 292
            ||||||||| ||  | |||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 1093 cgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctactg 1152

                                    
Query: 293  ggctcccacccgtgacgaccgtat 316
            ||||||||||||||| ||||||||
Sbjct: 1153 ggctcccacccgtgaggaccgtat 1176

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score =  157 bits (79), Expect = 3e-35
 Identities = 212/255 (83%), Gaps = 1/255 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 100
           ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 55  atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 114

                                                                       
Query: 101 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 160
           || ||||| |||||||||||| |||||||| ||||| || ||||||||||| |||  |||
Sbjct: 115 caatacactgtcaacaaccag-atggtgaatgccactctcatgaacatcgctgataaccc 173

                                                                       
Query: 161 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 220
            || || || |||||||| || |||||||||||| | |||||| || | || |||||  |
Sbjct: 174 gacaaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtccccattat 233

                                                                       
Query: 221 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 280
            ||||| |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||
Sbjct: 234 tgtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatgga 293

                          
Query: 281 gaagttctactgggc 295
           ||||||||| |||||
Sbjct: 294 gaagttctattgggc 308

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score =  157 bits (79), Expect = 3e-35
 Identities = 212/255 (83%), Gaps = 1/255 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 100
           ||||| || ||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 710 atgtgttgtctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 769

                                                                       
Query: 101 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 160
           || |||||||||||||||||| |||||||| |||||||| |||||||| || ||   |||
Sbjct: 770 caatacaccgtcaacaaccag-atggtgaatgccaccctcatgaacattgctgacaaccc 828

                                                                       
Query: 161 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 220
            || || || |||||||| || |||||||||||| | |||||| || | || |||||  |
Sbjct: 829 aacaaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtacccattat 888

                                                                       
Query: 221 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 280
            ||||| |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||
Sbjct: 889 tgtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatgga 948

                          
Query: 281 gaagttctactgggc 295
           |||||||||||||||
Sbjct: 949 gaagttctactgggc 963

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
           (pJQ4)
          Length = 1655

 Score =  153 bits (77), Expect = 4e-34
 Identities = 207/249 (83%), Gaps = 1/249 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 106
           |||||||||||||||||||| || || || || ||||| ||||| ||||| || || |||
Sbjct: 705 tgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacccaatac 764

                                                                       
Query: 107 accgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaa 166
           || |||||||||||| |||||||| ||||| || |||||||| || |||  ||| || ||
Sbjct: 765 actgtcaacaaccag-atggtgaatgccactctcatgaacattgctgataacccgacaaa 823

                                                                       
Query: 167 cgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 226
           ||| |||||||| || |||||||||||| | |||||| || | || |||||  | |||||
Sbjct: 824 cgtccagctccccggtatgtacaacaagcaagagaacgccagagtccccattattgtcac 883

                                                                       
Query: 227 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagtt 286
            |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||||||
Sbjct: 884 tggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaagtt 943

                    
Query: 287 ctactgggc 295
           ||| |||||
Sbjct: 944 ctattgggc 952

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  151 bits (76), Expect = 2e-33
 Identities = 227/276 (82%), Gaps = 1/276 (0%)
 Strand = Plus / Plus

                                                                        
Query: 41   atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 100
            ||||||||||| || ||||||||||| || || || || ||| | ||||| ||||| || 
Sbjct: 733  atgtgctgcctgtttatcaacgatctcgatgccggagctggtcgtatgggtggaacaact 792

                                                                        
Query: 101  cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 160
            || ||||| || ||||| ||| |||||||| |||||||| |||||||| || ||   |||
Sbjct: 793  caatacactgttaacaatcag-atggtgaatgccaccctcatgaacatagctgacaaccc 851

                                                                        
Query: 161  caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 220
             || || || ||||| |||||||||||||||||||| |||||||| ||||| |||||| |
Sbjct: 852  aacaaatgtccagcttcctggcatgtacaacaaggaagagaaccctcgtgttcccatcat 911

                                                                        
Query: 221  cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 280
             ||||| |||||||| ||||| ||  | || || ||||| ||||||||||| ||||||||
Sbjct: 912  tgtcactggtaacgacttctcaacattgtatgcccctcttatccgtgatggccgtatgga 971

                                                
Query: 281  gaagttctactgggctcccacccgtgacgaccgtat 316
            ||| ||||||||||| |||||| | || ||||||||
Sbjct: 972  gaaattctactgggcacccaccagggaggaccgtat 1007

---

>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score =  151 bits (76), Expect = 2e-33
 Identities = 179/212 (84%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 105 acaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccacc 164
           |||| |||||||||||| ||||| ||||||||||| |||||||| || ||   ||| |||
Sbjct: 1   acactgtcaacaaccag-atggttaacgccaccctcatgaacattgctgacaacccaacc 59

                                                                       
Query: 165 aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 224
           || || ||||||||||| |||||||||||| |||| ||  | ||||| |||||| |||| 
Sbjct: 60  aatgtccagctccctggtatgtacaacaagcaggacaatgctcgtgtacccatcatcgtt 119

                                                                       
Query: 225 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 284
           || |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||| 
Sbjct: 120 actggtaacgacttctctaccttgtatgctcctctcatccgtgatggtcgtatggagaaa 179

                                           
Query: 285 ttctactgggctcccacccgtgacgaccgtat 316
           ||||||||||| ||||| ||||| ||||||||
Sbjct: 180 ttctactgggcacccactcgtgaggaccgtat 211

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score =  147 bits (74), Expect = 2e-32
 Identities = 225/274 (82%), Gaps = 1/274 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            |||||||| |||||||||||||||||| ||||||||||| ||  | ||||||     |||
Sbjct: 1561 gatgtgctccctcttcatcaacgatctggacgctggtgctggccgcatgggcatgggcac 1620

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
             |||||||| |||||||||||| ||||| ||||| ||||| ||||||||||| |||  ||
Sbjct: 1621 ccagtacactgtcaacaaccag-atggtcaacgctaccctcatgaacatcgctgataacc 1679

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            | |||||||||||||| || ||| |||||||  ||| | |||  |||||||| ||||| |
Sbjct: 1680 ctaccaacgtgcagctgcccggcgtgtacaaggaggtgcagattccccgtgttcccattg 1739

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            ||  ||| |||||||||||||| || || ||||| || || |||||||| || || ||||
Sbjct: 1740 tctgcacgggtaacgatttctccaccctgtacgcccccctcatccgtgacggccgcatgg 1799

                                              
Query: 280  agaagttctactgggctcccacccgtgacgaccg 313
            |||||| |||||||   ||||||||||| |||||
Sbjct: 1800 agaagtactactggaaccccacccgtgaggaccg 1833

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase mRNA, complete cds
          Length = 1693

 Score =  145 bits (73), Expect = 1e-31
 Identities = 200/241 (82%), Gaps = 1/241 (0%)
 Strand = Plus / Plus

                                                                       
Query: 53  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 112
           |||||||||||||| ||||| ||||| ||  | |||||||  ||||| ||||||||||| 
Sbjct: 645 ttcatcaacgatctggacgccggtgccggccgcatgggcgacaccacccagtacaccgtg 704

                                                                       
Query: 113 aacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 172
           ||||||||| ||||||||||||||||||||||||||||||||   ||| |||||||| ||
Sbjct: 705 aacaaccag-atggtgaacgccaccctgatgaacatcgccgacaacccgaccaacgtcca 763

                                                                       
Query: 173 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 232
           ||| || ||  ||||||| || ||||||| ||| || |||||||| ||   ||| || ||
Sbjct: 764 gctgcccggtgtgtacaagaacgaggagatccctcgcgtgcccattgtgtgcacgggcaa 823

                                                                       
Query: 233 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 292
           ||| ||||| || || ||||| || |||||||| ||||| || |||||||||| ||||||
Sbjct: 824 cgacttctccaccctgtacgcgcccctgatccgcgatggccgcatggagaagtactactg 883

            
Query: 293 g 293
           |
Sbjct: 884 g 884

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score =  135 bits (68), Expect = 9e-29
 Identities = 209/255 (81%), Gaps = 1/255 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 100
           ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 729 atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 788

                                                                       
Query: 101 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 160
           || ||||| |||||||||||  |||||||| ||||| || |||||||| || ||   |||
Sbjct: 789 caatacactgtcaacaacca-aatggtgaatgccactctcatgaacattgctgacaaccc 847

                                                                       
Query: 161 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 220
            || || || |||||||| || |||||||||||| | |||||  || | || || ||  |
Sbjct: 848 gacaaatgtccagctccccggtatgtacaacaagcaagagaatgccagggtccctattat 907

                                                                       
Query: 221 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 280
           |||||| |||||||||||||| ||  | || ||||| || ||||||||||||||||||||
Sbjct: 908 cgtcactggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatgga 967

                          
Query: 281 gaagttctactgggc 295
           |||||||||||||||
Sbjct: 968 gaagttctactgggc 982

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score =  129 bits (65), Expect = 6e-27
 Identities = 209/256 (81%), Gaps = 1/256 (0%)
 Strand = Plus / Plus

                                                                       
Query: 47  tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 106
           ||||| || ||||| |||||||| || ||||| |||||| | || || || || || |||
Sbjct: 582 tgcctatttatcaatgatcttgatgcaggtgccggtaggcttggtgggacaactcaatac 641

                                                                       
Query: 107 accgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaa 166
           || || ||||||||  |||||||| || ||||| |||||||| || ||    || |||||
Sbjct: 642 actgtgaacaacca-aatggtgaatgctaccctcatgaacattgctgacaatccaaccaa 700

                                                                       
Query: 167 cgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 226
            || |||||||| || |||||||||||||| ||||| || ||||| || ||| |||||||
Sbjct: 701 tgttcagctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatcgtcac 760

                                                                       
Query: 227 cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagtt 286
            ||||| || ||||||||  | ||||||||||| || |||||||||||||||||||| ||
Sbjct: 761 aggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggagaaatt 820

                           
Query: 287 ctactgggctcccacc 302
           ||||||||| ||||||
Sbjct: 821 ctactgggcgcccacc 836

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  129 bits (65), Expect = 6e-27
 Identities = 209/256 (81%), Gaps = 1/256 (0%)
 Strand = Plus / Plus

                                                                        
Query: 47   tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 106
            ||||| || ||||| |||||||| || ||||| |||||| | || || || || || |||
Sbjct: 755  tgcctatttatcaatgatcttgatgcaggtgccggtaggcttggtgggacaactcaatac 814

                                                                        
Query: 107  accgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaa 166
            || || ||||||||  |||||||| || ||||| |||||||| || ||    || |||||
Sbjct: 815  actgtgaacaacca-aatggtgaatgctaccctcatgaacattgctgacaatccaaccaa 873

                                                                        
Query: 167  cgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 226
             || |||||||| || |||||||||||||| ||||| || ||||| || ||| |||||||
Sbjct: 874  tgttcagctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatcgtcac 933

                                                                        
Query: 227  cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagtt 286
             ||||| || ||||||||  | ||||||||||| || |||||||||||||||||||| ||
Sbjct: 934  aggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggagaaatt 993

                            
Query: 287  ctactgggctcccacc 302
            ||||||||| ||||||
Sbjct: 994  ctactgggcgcccacc 1009

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score =  119 bits (60), Expect = 6e-24
 Identities = 207/255 (81%), Gaps = 1/255 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 100
           ||||| ||||||||||||||||||||||| || || || ||||| ||||| ||||| || 
Sbjct: 746 atgtgttgcctcttcatcaacgatcttgatgcaggagccggtagaatgggtggaactaca 805

                                                                       
Query: 101 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 160
           || ||||| |||||||||||  |||||||| || || || |||||||| || |||  |||
Sbjct: 806 caatacactgtcaacaacca-aatggtgaatgctacactcatgaacattgctgataaccc 864

                                                                       
Query: 161 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 220
            || || || || ||||| || |||||||||||| | |||||  || | || || ||  |
Sbjct: 865 gacgaatgtccaactccccggtatgtacaacaagcaagagaatgccagggtacctattat 924

                                                                       
Query: 221 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 280
            ||||| |||||||||||||| ||  | || || ||||| ||||||||||||||||||||
Sbjct: 925 tgtcactggtaacgatttctccacattgtatgcacctcttatccgtgatggtcgtatgga 984

                          
Query: 281 gaagttctactgggc 295
           ||| |||||||||||
Sbjct: 985 gaaattctactgggc 999

---

>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score =  119 bits (60), Expect = 6e-24
 Identities = 114/132 (86%)
 Strand = Plus / Plus

                                                                       
Query: 185 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 244
           ||||||||| || |||||||||||||||||| || | ||||||||||| |||||||| ||
Sbjct: 1   gtacaacaaagaagagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccac 60

                                                                       
Query: 245 gctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccg 304
             | || ||||| || ||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 61  cttgtatgctccccttatccgtgatggtcgtatggagaaattctactgggcaccaacccg 120

                       
Query: 305 tgacgaccgtat 316
            ||||| |||||
Sbjct: 121 cgacgatcgtat 132

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score =  107 bits (54), Expect = 2e-20
 Identities = 91/102 (89%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                        
Query: 53   ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 112
            |||||||||||||| ||||| ||||| ||  | |||||||  ||||| ||||||||||| 
Sbjct: 1857 ttcatcaacgatctggacgccggtgccggccgcatgggcgacaccacccagtacaccgtg 1916

                                                      
Query: 113  aacaaccagnatggtgaacgccaccctgatgaacatcgccga 154
            ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1917 aacaaccag-atggtgaacgccaccctgatgaacatcgccga 1957

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score =  105 bits (53), Expect = 8e-20
 Identities = 176/216 (81%), Gaps = 1/216 (0%)
 Strand = Plus / Plus

                                                                       
Query: 80  ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagnatggtgaacgccaccct 139
           ||||| ||||| ||||| || || ||||| |||||||||||  |||||||| ||||| ||
Sbjct: 8   ggtagaatgggtggaactacccaatacactgtcaacaacca-aatggtgaatgccactct 66

                                                                       
Query: 140 gatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagga 199
            |||||||| || ||   ||| || || || |||||||| || |||||||||||| | ||
Sbjct: 67  catgaacattgctgacaacccgacaaatgtccagctccccggtatgtacaacaagcaaga 126

                                                                       
Query: 200 gaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctct 259
           |||  || | || || ||  ||||||| |||||||||||||| ||  | || ||||| ||
Sbjct: 127 gaatgccagggtccctattatcgtcactggtaacgatttctccacattgtatgctccact 186

                                               
Query: 260 gatccgtgatggtcgtatggagaagttctactgggc 295
            |||||||||||||||||||||||||||||||||||
Sbjct: 187 tatccgtgatggtcgtatggagaagttctactgggc 222

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 216/271 (79%), Gaps = 1/271 (0%)
 Strand = Plus / Minus

                                                                        
Query: 40   gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 99
            ||||||||| ||||||||||| |||||||| || || || ||||| ||||| || || ||
Sbjct: 7161 gatgtgctgtctcttcatcaatgatcttgatgcaggagctggtagaatgggtggcactac 7102

                                                                        
Query: 100  gcagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgccc 159
             || ||||| |||||||||||| ||||| || || ||||| |||||||| || ||   ||
Sbjct: 7101 tcaatacacagtcaacaaccag-atggtaaatgcaaccctcatgaacattgctgacaacc 7043

                                                                        
Query: 160  ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 219
            | ||||| || || || || || ||||||||||| || |||||  |||| || || ||| 
Sbjct: 7042 ctaccaatgttcaacttcccggtatgtacaacaaagaagagaatgcccgcgtccctatca 6983

                                                                        
Query: 220  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 279
            ||||||| || || || ||||| ||| | || |||||| | || |||||||| |||||||
Sbjct: 6982 tcgtcactggcaatgacttctctacgttgtatgctcctttaattcgtgatggacgtatgg 6923

                                           
Query: 280  agaagttctactgggctcccacccgtgacga 310
            | || ||||||||||| || || ||||||||
Sbjct: 6922 aaaaattctactgggcacctactcgtgacga 6892

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 207/261 (79%), Gaps = 1/261 (0%)
 Strand = Plus / Plus

                                                                        
Query: 56   atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 115
            |||||||||||||| ||||| || || ||| | || || || || |||||||| || || 
Sbjct: 759  atcaacgatcttgatgctggagctggaaggcttggtgggactacccagtacacagtgaat 818

                                                                        
Query: 116  aaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagct 175
            |||||| ||||| || || || || |||||||| || ||   ||| ||||| ||||||||
Sbjct: 819  aaccag-atggtaaatgctactcttatgaacattgctgacaacccaaccaatgtgcagct 877

                                                                        
Query: 176  ccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacga 235
             || |||||||| |||||||| || || ||| | || |||||| | || || ||||||||
Sbjct: 878  accaggcatgtataacaaggaagaaaatcccagagttcccatcatagtaactggtaacga 937

                                                                        
Query: 236  tttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggc 295
             ||||| ||| | || || ||||| || ||||||||||| ||||| || |||||||||||
Sbjct: 938  cttctcaacgttatatgcacctctcattcgtgatggtcggatggataaattctactgggc 997

                                 
Query: 296  tcccacccgtgacgaccgtat 316
            ||| || ||||| || |||||
Sbjct: 998  tccaactcgtgaagatcgtat 1018

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 67/75 (89%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                          
Query: 101    cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 160
              |||||||||||||||| |||   |||||| ||||||||||||||||||||||||   |||
Sbjct: 445720 cagtacaccgtcaacacccaac-tggtgagcgccaccctgatgaacatcgccgacaaccc 445662

                             
Query: 161    caccaacgtgcagct 175
              |||||||||||||||
Sbjct: 445661 caccaacgtgcagct 445647

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 155/193 (80%), Gaps = 1/193 (0%)
 Strand = Plus / Plus

                                                                       
Query: 101 cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 160
           |||||||| || ||||||||| ||||| || |||||||| |||||||| || |||  |||
Sbjct: 487 cagtacactgtgaacaaccag-atggtcaatgccaccctcatgaacattgctgataaccc 545

                                                                       
Query: 161 caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 220
            || || || ||| | ||||| |||||||||||||| || || || ||||| || || ||
Sbjct: 546 aacgaatgttcagttgcctggaatgtacaacaaggaagaaaatcctcgtgttccaattgt 605

                                                                       
Query: 221 cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 280
            || || || || |||||||| ||  | || |||||  |||| |||||||| ||||||||
Sbjct: 606 tgtgacaggaaatgatttctcaactttgtatgctccattgattcgtgatgggcgtatgga 665

                        
Query: 281 gaagttctactgg 293
           |||||||||||||
Sbjct: 666 gaagttctactgg 678

---

>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete
           cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 222 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 281
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 282 aagttctactgg 293
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 199/255 (78%), Gaps = 1/255 (0%)
 Strand = Plus / Minus

                                                                          
Query: 41     atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 100
              ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 104078 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 104019

                                                                          
Query: 101    cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 160
              |||||||| || ||||| ||  ||||| || || || || |||||||| || |||  |||
Sbjct: 104018 cagtacacagtgaacaatca-aatggtaaatgcaacacttatgaacattgctgataaccc 103960

                                                                          
Query: 161    caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 220
               || || || || || ||||| ||||| ||||| || |||||  | |||||||| ||| |
Sbjct: 103959 aacaaatgttcaacttcctggtatgtataacaaagaagagaatgcacgtgtgcctatcat 103900

                                                                          
Query: 221    cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 280
               || || ||||| ||||| || ||  | || |||||||| || ||||| |||||||||||
Sbjct: 103899 tgttactggtaatgatttttcaacattgtatgctcctcttattcgtgacggtcgtatgga 103840

                             
Query: 281    gaagttctactgggc 295
              ||| ||||| |||||
Sbjct: 103839 gaaattctattgggc 103825

---

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 199/255 (78%), Gaps = 1/255 (0%)
 Strand = Plus / Minus

                                                                         
Query: 41    atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 100
             ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 83103 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 83044

                                                                         
Query: 101   cagtacaccgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccc 160
             |||||||| || ||||| ||  ||||| || || || || |||||||| || |||  |||
Sbjct: 83043 cagtacacagtgaacaatca-aatggtaaatgcaacacttatgaacattgctgataaccc 82985

                                                                         
Query: 161   caccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgt 220
              || || || || || ||||| ||||| ||||| || |||||  | |||||||| ||| |
Sbjct: 82984 aacaaatgttcaacttcctggtatgtataacaaagaagagaatgcacgtgtgcctatcat 82925

                                                                         
Query: 221   cgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgga 280
              || || ||||| ||||| || ||  | || |||||||| || ||||| |||||||||||
Sbjct: 82924 tgttactggtaatgatttttcaacattgtatgctcctcttattcgtgacggtcgtatgga 82865

                            
Query: 281   gaagttctactgggc 295
             ||| ||||| |||||
Sbjct: 82864 gaaattctattgggc 82850

---

>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1299

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 222 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 281
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924

                       
Query: 282 aagttctactgg 293
           ||||||||||||
Sbjct: 925 aagttctactgg 936

---

>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 222 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 281
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 282 aagttctactgg 293
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1496

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 222 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 281
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932

                       
Query: 282 aagttctactgg 293
           ||||||||||||
Sbjct: 933 aagttctactgg 944

---

>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-D21
          Length = 1447

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 222 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 281
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945

                       
Query: 282 aagttctactgg 293
           ||||||||||||
Sbjct: 946 aagttctactgg 957

---

>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 222   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 281
             ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627

                         
Query: 282   aagttctactgg 293
             ||||||||||||
Sbjct: 97626 aagttctactgg 97615

---

>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 231 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 290
           ||||||||||| || || || ||||| ||||||||||| ||  | |||||||||||||||
Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995

              
Query: 291 tgg 293
           |||
Sbjct: 996 tgg 998

---

>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence
          Length = 262

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 123/154 (79%), Gaps = 1/154 (0%)
 Strand = Plus / Plus

                                                                       
Query: 49  cctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 108
           |||||||||||| |||||||| || || || |||||  | || ||||| || || || ||
Sbjct: 36  cctcttcatcaatgatcttgatgcaggggctggtagacttggtggaactacacaatatac 95

                                                                       
Query: 109 cgtcaacaaccagnatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacg 168
            ||||| |||||| |||||||| || ||||| |||||||| || |||   || || || |
Sbjct: 96  agtcaataaccag-atggtgaatgcaacccttatgaacattgctgataatccaactaatg 154

                                             
Query: 169 tgcagctccctggcatgtacaacaaggaggagaa 202
           | ||||||||||| |||||||||||  |||||||
Sbjct: 155 ttcagctccctggtatgtacaacaaacaggagaa 188

---

>gb|AC145325.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0034E03 map near 50283S, complete sequence
          Length = 134074

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 8     gaggctgcaggacatgatcaa 28
             |||||||||||||||||||||
Sbjct: 63677 gaggctgcaggacatgatcaa 63657

---

>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 593

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 222 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 280
           ||||| || ||||||||||| || || || |||| | ||||||||||| ||  | |||||
Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195

                        
Query: 281 gaagttctactgg 293
           |||||||||||||
Sbjct: 196 gaagttctactgg 208

---

>emb|AL353783.14| Human DNA sequence from clone RP11-271O3 on chromosome 9, complete
              sequence
          Length = 136688

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     gcaggacatgatcaagcaagggta 37
              |||||||| |||||||||||||||
Sbjct: 118475 gcaggacaggatcaagcaagggta 118498

---

>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2739

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  tgatgaacatcgccgatgcc 158
            ||||||||||||||||||||
Sbjct: 1896 tgatgaacatcgccgatgcc 1877

---

>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  tgatgaacatcgccgatgcc 158
            ||||||||||||||||||||
Sbjct: 1897 tgatgaacatcgccgatgcc 1878

---

>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence
          Length = 42802

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   tgatgaacatcgccgatgcc 158
             ||||||||||||||||||||
Sbjct: 34318 tgatgaacatcgccgatgcc 34337

---

>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA
            complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  tgatgaacatcgccgatgcc 158
            ||||||||||||||||||||
Sbjct: 1882 tgatgaacatcgccgatgcc 1863

---

>emb|AL806510.12| Mouse DNA sequence from clone RP23-155P8 on chromosome 4, complete
             sequence
          Length = 95087

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    agcaagggtaaggatgtgct 47
             ||||||||||||||||||||
Sbjct: 46785 agcaagggtaaggatgtgct 46766


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,784,472
Number of Sequences: 3902068
Number of extensions: 1784472
Number of successful extensions: 37699
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37434
Number of HSP's gapped (non-prelim): 172
length of query: 317
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 295
effective length of database: 17,147,199,772
effective search space: 5058423932740
effective search space used: 5058423932740
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---