ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baald11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507049.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.36-2 mRNA Length = 1298 Score = 240 bits (121), Expect = 3e-60 Identities = 326/393 (82%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 54 agctttggagtggtgggatggccaccaataagaacattcaggtatgaacagcctgttcgg 113 |||||||||||||||||||||||||| || || |||||| ||||||||||||||| Sbjct: 444 agctttggagtggtgggatggccaccgatccgacagttcagg-atgaacagcctgttcaa 502 Query: 114 ccaggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctgg 173 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 503 tcaggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctga 562 Query: 174 ctcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggt 233 |||||| ||||||||||||||||| ||||| || ||||| | || ||||||||||| Sbjct: 563 tgtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggt 622 Query: 234 gaacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaa 293 |||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 623 gaacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaa 682 Query: 294 gacccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttc 353 ||||||||| || |||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 683 gacccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttc 742 Query: 354 taatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatga 413 | || ||| || || |||| || ||||||||||| | ||||||||| | || || || Sbjct: 743 tcataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacga 802 Query: 414 agacagggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||| |||||||| Sbjct: 803 ggacagggatggtgactggatgctcgttggaga 835
>ref|XM_468410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1175 Score = 240 bits (121), Expect = 3e-60 Identities = 326/393 (82%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 54 agctttggagtggtgggatggccaccaataagaacattcaggtatgaacagcctgttcgg 113 |||||||||||||||||||||||||| || || |||||| ||||||||||||||| Sbjct: 405 agctttggagtggtgggatggccaccgatccgacagttcagg-atgaacagcctgttcaa 463 Query: 114 ccaggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctgg 173 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 464 tcaggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctga 523 Query: 174 ctcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggt 233 |||||| ||||||||||||||||| ||||| || ||||| | || ||||||||||| Sbjct: 524 tgtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggt 583 Query: 234 gaacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaa 293 |||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 584 gaacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaa 643 Query: 294 gacccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttc 353 ||||||||| || |||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 644 gacccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttc 703 Query: 354 taatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatga 413 | || ||| || || |||| || ||||||||||| | ||||||||| | || || || Sbjct: 704 tcataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacga 763 Query: 414 agacagggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||| |||||||| Sbjct: 764 ggacagggatggtgactggatgctcgttggaga 796
>ref|XM_468411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1180 Score = 240 bits (121), Expect = 3e-60 Identities = 326/393 (82%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 54 agctttggagtggtgggatggccaccaataagaacattcaggtatgaacagcctgttcgg 113 |||||||||||||||||||||||||| || || |||||| ||||||||||||||| Sbjct: 410 agctttggagtggtgggatggccaccgatccgacagttcagg-atgaacagcctgttcaa 468 Query: 114 ccaggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctgg 173 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 469 tcaggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctga 528 Query: 174 ctcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggt 233 |||||| ||||||||||||||||| ||||| || ||||| | || ||||||||||| Sbjct: 529 tgtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggt 588 Query: 234 gaacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaa 293 |||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 589 gaacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaa 648 Query: 294 gacccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttc 353 ||||||||| || |||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 649 gacccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttc 708 Query: 354 taatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatga 413 | || ||| || || |||| || ||||||||||| | ||||||||| | || || || Sbjct: 709 tcataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacga 768 Query: 414 agacagggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||| |||||||| Sbjct: 769 ggacagggatggtgactggatgctcgttggaga 801
>dbj|AK104802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C05, full insert sequence Length = 1175 Score = 240 bits (121), Expect = 3e-60 Identities = 326/393 (82%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 54 agctttggagtggtgggatggccaccaataagaacattcaggtatgaacagcctgttcgg 113 |||||||||||||||||||||||||| || || |||||| ||||||||||||||| Sbjct: 405 agctttggagtggtgggatggccaccgatccgacagttcagg-atgaacagcctgttcaa 463 Query: 114 ccaggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctgg 173 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 464 tcaggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctga 523 Query: 174 ctcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggt 233 |||||| ||||||||||||||||| ||||| || ||||| | || ||||||||||| Sbjct: 524 tgtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggt 583 Query: 234 gaacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaa 293 |||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 584 gaacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaa 643 Query: 294 gacccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttc 353 ||||||||| || |||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 644 gacccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttc 703 Query: 354 taatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatga 413 | || ||| || || |||| || ||||||||||| | ||||||||| | || || || Sbjct: 704 tcataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacga 763 Query: 414 agacagggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||| |||||||| Sbjct: 764 ggacagggatggtgactggatgctcgttggaga 796
>dbj|AK104501.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E07, full insert sequence Length = 1180 Score = 240 bits (121), Expect = 3e-60 Identities = 326/393 (82%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 54 agctttggagtggtgggatggccaccaataagaacattcaggtatgaacagcctgttcgg 113 |||||||||||||||||||||||||| || || |||||| ||||||||||||||| Sbjct: 410 agctttggagtggtgggatggccaccgatccgacagttcagg-atgaacagcctgttcaa 468 Query: 114 ccaggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctgg 173 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 469 tcaggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctga 528 Query: 174 ctcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggt 233 |||||| ||||||||||||||||| ||||| || ||||| | || ||||||||||| Sbjct: 529 tgtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggt 588 Query: 234 gaacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaa 293 |||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 589 gaacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaa 648 Query: 294 gacccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttc 353 ||||||||| || |||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 649 gacccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttc 708 Query: 354 taatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatga 413 | || ||| || || |||| || ||||||||||| | ||||||||| | || || || Sbjct: 709 tcataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacga 768 Query: 414 agacagggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||| |||||||| Sbjct: 769 ggacagggatggtgactggatgctcgttggaga 801
>dbj|AK069892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039N11, full insert sequence Length = 1298 Score = 240 bits (121), Expect = 3e-60 Identities = 326/393 (82%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 54 agctttggagtggtgggatggccaccaataagaacattcaggtatgaacagcctgttcgg 113 |||||||||||||||||||||||||| || || |||||| ||||||||||||||| Sbjct: 444 agctttggagtggtgggatggccaccgatccgacagttcagg-atgaacagcctgttcaa 502 Query: 114 ccaggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctgg 173 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 503 tcaggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctga 562 Query: 174 ctcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggt 233 |||||| ||||||||||||||||| ||||| || ||||| | || ||||||||||| Sbjct: 563 tgtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggt 622 Query: 234 gaacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaa 293 |||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 623 gaacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaa 682 Query: 294 gacccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttc 353 ||||||||| || |||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 683 gacccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttc 742 Query: 354 taatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatga 413 | || ||| || || |||| || ||||||||||| | ||||||||| | || || || Sbjct: 743 tcataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacga 802 Query: 414 agacagggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||| |||||||| Sbjct: 803 ggacagggatggtgactggatgctcgttggaga 835
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 200 bits (101), Expect = 3e-48 Identities = 252/301 (83%), Gaps = 1/301 (0%) Strand = Plus / Minus Query: 54 agctttggagtggtgggatggccaccaataagaacattcaggtatgaacagcctgttcgg 113 |||||||||||||||||||||||||| || || |||||| ||||||||||||||| Sbjct: 35093314 agctttggagtggtgggatggccaccgatccgacagttcagg-atgaacagcctgttcaa 35093256 Query: 114 ccaggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctgg 173 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 35093255 tcaggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctga 35093196 Query: 174 ctcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggt 233 |||||| ||||||||||||||||| ||||| || ||||| | || ||||||||||| Sbjct: 35093195 tgtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggt 35093136 Query: 234 gaacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaa 293 |||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 35093135 gaacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaa 35093076 Query: 294 gacccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttc 353 ||||||||| || |||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 35093075 gacccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttc 35093016 Query: 354 t 354 | Sbjct: 35093015 t 35093015 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 380 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 439 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 35092740 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 35092681 Query: 440 ttggaga 446 ||||||| Sbjct: 35092680 ttggaga 35092674
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 200 bits (101), Expect = 3e-48 Identities = 252/301 (83%), Gaps = 1/301 (0%) Strand = Plus / Minus Query: 54 agctttggagtggtgggatggccaccaataagaacattcaggtatgaacagcctgttcgg 113 |||||||||||||||||||||||||| || || |||||| ||||||||||||||| Sbjct: 153655 agctttggagtggtgggatggccaccgatccgacagttcagg-atgaacagcctgttcaa 153597 Query: 114 ccaggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctgg 173 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 153596 tcaggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctga 153537 Query: 174 ctcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggt 233 |||||| ||||||||||||||||| ||||| || ||||| | || ||||||||||| Sbjct: 153536 tgtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggt 153477 Query: 234 gaacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaa 293 |||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 153476 gaacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaa 153417 Query: 294 gacccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttc 353 ||||||||| || |||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 153416 gacccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttc 153357 Query: 354 t 354 | Sbjct: 153356 t 153356 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 380 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 439 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 153081 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 153022 Query: 440 ttggaga 446 ||||||| Sbjct: 153021 ttggaga 153015
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 200 bits (101), Expect = 3e-48 Identities = 252/301 (83%), Gaps = 1/301 (0%) Strand = Plus / Minus Query: 54 agctttggagtggtgggatggccaccaataagaacattcaggtatgaacagcctgttcgg 113 |||||||||||||||||||||||||| || || |||||| ||||||||||||||| Sbjct: 66477 agctttggagtggtgggatggccaccgatccgacagttcagg-atgaacagcctgttcaa 66419 Query: 114 ccaggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctgg 173 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 66418 tcaggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctga 66359 Query: 174 ctcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggt 233 |||||| ||||||||||||||||| ||||| || ||||| | || ||||||||||| Sbjct: 66358 tgtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggt 66299 Query: 234 gaacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaa 293 |||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| ||||| Sbjct: 66298 gaacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaa 66239 Query: 294 gacccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttc 353 ||||||||| || |||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 66238 gacccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttc 66179 Query: 354 t 354 | Sbjct: 66178 t 66178 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 380 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 439 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 65903 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 65844 Query: 440 ttggaga 446 ||||||| Sbjct: 65843 ttggaga 65837
>emb|AJ748648.1| Oryza sativa (indica cultivar-group) mRNA for indoleacetic acid-inducible protein homologue Length = 882 Score = 192 bits (97), Expect = 7e-46 Identities = 319/393 (81%), Gaps = 10/393 (2%) Strand = Plus / Plus Query: 54 agctttggagtggtgggatggccaccaataagaacattcaggtatgaacagcctgttcgg 113 |||||||||||||||||||||||||| || || |||||| ||||||||||||||| Sbjct: 320 agctttggagtggtgggatggccaccgatccgacagttcagg-atgaacagcctgttcaa 378 Query: 114 ccaggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctgg 173 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 379 tcaggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctga 438 Query: 174 ctcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggt 233 |||||| ||||||||||||||||| ||||| || ||||| | || ||||||||||| Sbjct: 439 tgtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggt 498 Query: 234 gaacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaa 293 |||||||||||| ||||||||||| ||||| ||| || |||||||| ||||| Sbjct: 499 gaacatggatggagaggtcattggaaggaa---------caatgcgcaccgctcatacaa 549 Query: 294 gacccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttc 353 ||||||||| || |||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 550 gacccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttc 609 Query: 354 taatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatga 413 | || ||| ||||| |||| || ||||||||||| | ||||||||| | || || || Sbjct: 610 tcataatacaaagtcgctgaaactactagacaactctgccgaataccagctcacctacga 669 Query: 414 agacagggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||| |||||||| Sbjct: 670 ggacagggatggtgactggatgctcgttggaga 702
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| ||||||||||||||||||||||||||| Sbjct: 662 tatgaagacaaggatggtgactggatgcttgttggaga 699
>ref|XM_469685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| ||||||||||||||||||||||||||| Sbjct: 717 tatgaagacaaggatggtgactggatgcttgttggaga 754
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| ||||||||||||||||||||||||||| Sbjct: 30188911 tatgaagacaaggatggtgactggatgcttgttggaga 30188874
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| ||||||||||||||||||||||||||| Sbjct: 34984 tatgaagacaaggatggtgactggatgcttgttggaga 35021
>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein, exons 1-5 Length = 4539 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| ||||||||||||||||||||||||||| Sbjct: 3909 tatgaagacaaggatggtgactggatgcttgttggaga 3946
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| ||||||||||||||||||||||||||| Sbjct: 30280333 tatgaagacaaggatggtgactggatgcttgttggaga 30280296
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| ||||||||||||||||||||||||||| Sbjct: 714 tatgaagacaaggatggtgactggatgcttgttggaga 751
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| ||||||||||||||||||||||||||| Sbjct: 724 tatgaagacaaggatggtgactggatgcttgttggaga 761
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| ||||||||||||||||||||||||||| Sbjct: 719 tatgaagacaaggatggtgactggatgcttgttggaga 756
>dbj|D14413.1|VIRAUX22B Vigna radiata auxin-regulated mRNA Length = 1165 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttggaga 446 ||||||||||||| |||||||||||||||||| |||||||| Sbjct: 521 acatatgaagacaaggatggtgactggatgctagttggaga 561
>ref|NM_119052.2| Arabidopsis thaliana PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor AT4G29080 (PAP2) mRNA, complete cds Length = 1227 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 62 agtggtgggatggccaccaataagaacattcagg 95 ||||||||||||||||||||||||| |||||||| Sbjct: 434 agtggtgggatggccaccaataagatcattcagg 467
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 62 agtggtgggatggccaccaataagaacattcagg 95 ||||||||||||||||||||||||| |||||||| Sbjct: 52761 agtggtgggatggccaccaataagatcattcagg 52728
>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project) Length = 97714 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 62 agtggtgggatggccaccaataagaacattcagg 95 ||||||||||||||||||||||||| |||||||| Sbjct: 77792 agtggtgggatggccaccaataagatcattcagg 77759
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 62 agtggtgggatggccaccaataagaacattcagg 95 ||||||||||||||||||||||||| |||||||| Sbjct: 36288 agtggtgggatggccaccaataagatcattcagg 36255
>gb|AY133516.1| Arabidopsis thaliana At4g29080/F19B15_110 mRNA, complete cds Length = 918 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 62 agtggtgggatggccaccaataagaacattcagg 95 ||||||||||||||||||||||||| |||||||| Sbjct: 429 agtggtgggatggccaccaataagatcattcagg 462
>gb|AY053404.1| Arabidopsis thaliana AT4g29080/F19B15_110 mRNA, complete cds Length = 1189 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 62 agtggtgggatggccaccaataagaacattcagg 95 ||||||||||||||||||||||||| |||||||| Sbjct: 434 agtggtgggatggccaccaataagatcattcagg 467
>gb|AF332402.1| Arabidopsis thaliana clone C00024 (f) putative phytochrome-associated protein 2 (At4g29080) mRNA, complete cds Length = 918 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 62 agtggtgggatggccaccaataagaacattcagg 95 ||||||||||||||||||||||||| |||||||| Sbjct: 429 agtggtgggatggccaccaataagatcattcagg 462
>emb|AJ458326.1|ATH458326 Arabidopsis thaliana mRNA for putative auxin-induced protein 27 (iaa27 gene) Length = 918 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 62 agtggtgggatggccaccaataagaacattcagg 95 ||||||||||||||||||||||||| |||||||| Sbjct: 429 agtggtgggatggccaccaataagatcattcagg 462
>gb|AF087936.1|AF087936 Arabidopsis thaliana phytochrome-associated protein 2 (PAP2) mRNA, complete cds Length = 1090 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 62 agtggtgggatggccaccaataagaacattcagg 95 ||||||||||||||||||||||||| |||||||| Sbjct: 429 agtggtgggatggccaccaataagatcattcagg 462
>dbj|AP006634.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT15O18, TM0086, complete sequence Length = 133572 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| |||||||||||||||||| |||||||| Sbjct: 27148 tatgaagacaaggatggtgactggatgctagttggaga 27185
>dbj|AB004933.1| Vigna radiata mRNA for Aux22e, complete cds Length = 1006 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| |||||||||||||||||| |||||||| Sbjct: 564 tatgaagacaaggatggtgactggatgctggttggaga 601
>gb|AF123507.1| Nicotiana tabacum Nt-iaa4.5 deduced protein mRNA, complete cds Length = 993 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttggaga 446 ||||||||||||| ||||||||| |||||||| |||||||| Sbjct: 553 acatatgaagacaaggatggtgattggatgctagttggaga 593
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatgcttgttgg 443 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 130307 tgacttatgaagacaaggatggagactggatgcttgttgg 130346
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatgcttgttgg 443 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 37496 tgacttatgaagacaaggatggagactggatgcttgttgg 37535
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatgcttgttgg 443 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 7852721 tgacttatgaagacaaggatggagactggatgcttgttgg 7852760 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||||| ||||| |||||||||||||||||| Sbjct: 27627784 tatgaagacaaggatgctgactggatgcttgttgg 27627750
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 412 gaagacagggatggtgactggatgcttgttggagac 447 ||||||| |||||| ||||||||||||||||||||| Sbjct: 632 gaagacaaggatggagactggatgcttgttggagac 667
>dbj|AK106192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E03, full insert sequence Length = 1249 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatgcttgttgg 443 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 725 tgacttatgaagacaaggatggagactggatgcttgttgg 764
>dbj|AK105936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B07, full insert sequence Length = 1240 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatgcttgttgg 443 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 716 tgacttatgaagacaaggatggagactggatgcttgttgg 755
>dbj|AK102762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D08, full insert sequence Length = 1150 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatgcttgttgg 443 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 696 tgacttatgaagacaaggatggagactggatgcttgttgg 735
>dbj|AK069902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034K17, full insert sequence Length = 1306 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatgcttgttgg 443 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 782 tgacttatgaagacaaggatggagactggatgcttgttgg 821
>ref|NM_125965.2| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.2 mRNA, complete cds Length = 1531 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 420 ggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||||||| Sbjct: 1146 ggatggtgactggatgcttgttggaga 1172
>ref|NM_180944.1| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.1 mRNA, complete cds Length = 1537 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 420 ggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||||||| Sbjct: 1146 ggatggtgactggatgcttgttggaga 1172
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||||| ||||| |||||||||||||||||| Sbjct: 95060 tatgaagacaaggatgctgactggatgcttgttgg 95026
>gb|AY137964.1| Mirabilis jalapa clone MSR-193 Aux/IAA4 mRNA, partial cds Length = 157 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatgcttgttggaga 446 |||| ||||| |||| |||||| |||||||||||||||||||| Sbjct: 8 tgacctatgaggacaaggatggcgactggatgcttgttggaga 50
>gb|AY070451.1| Arabidopsis thaliana At5g65670 mRNA sequence Length = 1449 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 420 ggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||||||| Sbjct: 1118 ggatggtgactggatgcttgttggaga 1144
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 420 ggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||||||| Sbjct: 111881 ggatggtgactggatgcttgttggaga 111855
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||| | |||||||||||||||||||||||| Sbjct: 688 tatgaagataaggatggtgactggatgcttgttgg 722
>gb|AF334715.1| Arabidopsis thaliana clone C00016 (e) auxin-induced protein IAA9 (At5g65670) mRNA, complete cds Length = 1017 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 420 ggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||||||| Sbjct: 873 ggatggtgactggatgcttgttggaga 899
>gb|AY087089.1| Arabidopsis thaliana clone 31563 mRNA, complete sequence Length = 1456 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 420 ggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||||||| Sbjct: 1150 ggatggtgactggatgcttgttggaga 1176
>dbj|AK109363.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E12, full insert sequence Length = 1220 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||||| ||||| |||||||||||||||||| Sbjct: 780 tatgaagacaaggatgctgactggatgcttgttgg 814
>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24 Length = 84440 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 420 ggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||||||| Sbjct: 7924 ggatggtgactggatgcttgttggaga 7950
>dbj|AK106181.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D03, full insert sequence Length = 1261 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||||| ||||| |||||||||||||||||| Sbjct: 821 tatgaagacaaggatgctgactggatgcttgttgg 855
>dbj|AK104018.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H11, full insert sequence Length = 1221 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||||| ||||| |||||||||||||||||| Sbjct: 774 tatgaagacaaggatgctgactggatgcttgttgg 808
>dbj|AK099253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168H04, full insert sequence Length = 1209 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||||| ||||| |||||||||||||||||| Sbjct: 769 tatgaagacaaggatgctgactggatgcttgttgg 803
>dbj|AK061439.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B11, full insert sequence Length = 1222 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||||| ||||| |||||||||||||||||| Sbjct: 782 tatgaagacaaggatgctgactggatgcttgttgg 816
>gb|U18411.1|ATU18411 Arabidopsis thaliana IAA9 (IAA9) gene, complete cds Length = 1425 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 420 ggatggtgactggatgcttgttggaga 446 ||||||||||||||||||||||||||| Sbjct: 1106 ggatggtgactggatgcttgttggaga 1132
>ref|NM_192002.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 816 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttgg 443 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 664 acatatgaagataaggatgctgactggatgcttgttgg 701
>emb|AJ566558.1|TCA566558 Theobroma cacao microsatellite, clone mTcCIR237 Length = 208 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| |||||| ||||||||||| |||||||| Sbjct: 45 tatgaagacaaggatggagactggatgctagttggaga 82
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttgg 443 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 27772040 acatatgaagataaggatgctgactggatgcttgttgg 27772077 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 412 gaagacagggatggtgactggatgcttgttgg 443 ||||||| |||||||||||||||||| ||||| Sbjct: 7251178 gaagacaaggatggtgactggatgctggttgg 7251209 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtggtgggatggccaccaat 82 |||||||||||||||||||| Sbjct: 7250049 gtggtgggatggccaccaat 7250068
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttgg 443 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 64095 acatatgaagataaggatgctgactggatgcttgttgg 64132
>dbj|AK106121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E11, full insert sequence Length = 1231 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttgg 443 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 751 acatatgaagataaggatgctgactggatgcttgttgg 788
>dbj|AK102396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092H03, full insert sequence Length = 971 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttgg 443 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 666 acatatgaagataaggatgctgactggatgcttgttgg 703
>dbj|AK061495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C06, full insert sequence Length = 1140 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttgg 443 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 677 acatatgaagataaggatgctgactggatgcttgttgg 714
>dbj|D14412.1|VIRAUX22A Vigna radiata auxin-regulated mRNA Length = 838 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 421 gatggtgactggatgcttgttggaga 446 |||||||||||||||||||||||||| Sbjct: 497 gatggtgactggatgcttgttggaga 522
>dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds Length = 1187 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| |||||||| ||||||||||||||||| Sbjct: 675 tatgaagacaaagatggtgattggatgcttgttggaga 712
>dbj|AB004932.1| Vigna radiata mRNA for Aux22d, complete cds Length = 936 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| ||||||||||||||||| |||||||| Sbjct: 549 tatgaagacaaagatggtgactggatgctggttggaga 586
>ref|NM_188615.1| Oryza sativa (japonica cultivar-group), Ozsa8218 predicted mRNA Length = 846 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 412 gaagacagggatggtgactggatgcttgttgg 443 ||||||| |||||||||||||||||| ||||| Sbjct: 700 gaagacaaggatggtgactggatgctggttgg 731 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtggtgggatggccaccaat 82 |||||||||||||||||||| Sbjct: 424 gtggtgggatggccaccaat 443
>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds Length = 478 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgt 440 ||||| |||| ||||||||||||||||||||| Sbjct: 238 tatgaggacaaggatggtgactggatgcttgt 269
>gb|AY289604.1| Pinus taeda auxin-induced protein 5 (IAA5) mRNA, complete cds Length = 1289 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgt 440 |||||||||| |||||| |||||||||||||| Sbjct: 730 tatgaagacaaggatggagactggatgcttgt 761
>gb|AY289600.1| Pinus taeda auxin-induced protein 1 (IAA1) mRNA, complete cds Length = 1209 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgt 440 |||||||||| |||||| |||||||||||||| Sbjct: 610 tatgaagacaaggatggagactggatgcttgt 641
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 412 gaagacagggatggtgactggatgcttgttgg 443 ||||||| |||||||||||||||||| ||||| Sbjct: 145826 gaagacaaggatggtgactggatgctggttgg 145857 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtggtgggatggccaccaat 82 |||||||||||||||||||| Sbjct: 144697 gtggtgggatggccaccaat 144716
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 412 gaagacagggatggtgactggatgcttgttgg 443 ||||||| |||||||||||||||||| ||||| Sbjct: 52608 gaagacaaggatggtgactggatgctggttgg 52639 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtggtgggatggccaccaat 82 |||||||||||||||||||| Sbjct: 51479 gtggtgggatggccaccaat 51498
>dbj|AK104654.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C04, full insert sequence Length = 1209 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 412 gaagacagggatggtgactggatgcttgttgg 443 ||||||| |||||||||||||||||| ||||| Sbjct: 684 gaagacaaggatggtgactggatgctggttgg 715 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtggtgggatggccaccaat 82 |||||||||||||||||||| Sbjct: 408 gtggtgggatggccaccaat 427
>dbj|AK072001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094L17, full insert sequence Length = 1291 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 412 gaagacagggatggtgactggatgcttgttgg 443 ||||||| |||||||||||||||||| ||||| Sbjct: 781 gaagacaaggatggtgactggatgctggttgg 812 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtggtgggatggccaccaat 82 |||||||||||||||||||| Sbjct: 507 gtggtgggatggccaccaat 526
>dbj|AK066156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054L16, full insert sequence Length = 1194 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 412 gaagacagggatggtgactggatgcttgttgg 443 ||||||| |||||||||||||||||| ||||| Sbjct: 732 gaagacaaggatggtgactggatgctggttgg 763 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtggtgggatggccaccaat 82 |||||||||||||||||||| Sbjct: 456 gtggtgggatggccaccaat 475
>dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A04, full insert sequence Length = 430 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 423 tggtgactggatgcttgttggaga 446 |||||||||||||||||||||||| Sbjct: 1 tggtgactggatgcttgttggaga 24
>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds Length = 943 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 412 gaagacagggatggtgactggatgcttgttgg 443 ||||||| |||||| ||||||||||||||||| Sbjct: 637 gaagacaaggatggagactggatgcttgttgg 668
>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds Length = 1784 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgt 440 ||||| |||| ||||||||||||||||||||| Sbjct: 1088 tatgaggacaaggatggtgactggatgcttgt 1119
>ref|NM_123736.2| Arabidopsis thaliana ATAUX2-11; transcription factor AT5G43700 (ATAUX2-11) mRNA, complete cds Length = 1168 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||||| |||||||| |||||||||||||| Sbjct: 665 tatgaagacaaagatggtgattggatgcttgttgg 699
>gb|AY090553.1| Zinnia elegans auxin-regulated protein (IAA8) mRNA, complete cds Length = 1499 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 420 ggatggtgactggatgcttgttggaga 446 ||||||||| ||||||||||||||||| Sbjct: 1115 ggatggtgattggatgcttgttggaga 1141
>gb|BT005853.1| Arabidopsis thaliana At5g43700 gene, complete cds Length = 561 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||||| |||||||| |||||||||||||| Sbjct: 433 tatgaagacaaagatggtgattggatgcttgttgg 467
>dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD19 Length = 87286 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||||| |||||||| |||||||||||||| Sbjct: 5880 tatgaagacaaagatggtgattggatgcttgttgg 5914
>emb|X53435.1|ATAUX211 A.thaliana auxin-inducible gene Aux2-11 Length = 1776 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||||| |||||||| |||||||||||||| Sbjct: 1209 tatgaagacaaagatggtgattggatgcttgttgg 1243
>gb|DQ252491.1| Solanum tuberosum clone 060E03 Aux/IAA protein-like mRNA, complete cds Length = 1590 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||| | |||||| ||||||||||||||||| Sbjct: 1038 tatgaagataaggatggggactggatgcttgttgg 1072
>gb|L15450.1|ATHIAA4A Arabidopsis thaliana auxin-responsive protein (IAA4) mRNA, 5' partial cds Length = 558 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttgg 443 |||||||||| |||||||| |||||||||||||| Sbjct: 433 tatgaagacaaagatggtgattggatgcttgttgg 467
>ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription factor AT3G04730 (IAA16) mRNA, complete cds Length = 1279 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttggagac 447 ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 746 acatatgaagataaagatggcgactggatgcttgtaggagac 787
>gb|AC142103.3| Mus musculus BAC clone RP24-287E15 from chromosome 17, complete sequence Length = 175787 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 184 gacaaggaggagggcgagaagaaggg 209 |||||||||||||| ||||||||||| Sbjct: 123838 gacaaggaggagggagagaagaaggg 123813
>gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete sequence Length = 207268 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 363 gaagtccttgaagctgttagacaact 388 ||||||||||||||||| |||||||| Sbjct: 151821 gaagtccttgaagctgtaagacaact 151796
>gb|AC011437.6|ATAC011437 Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence Length = 95310 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 406 acatatgaagacagggatggtgactggatgcttgttggagac 447 ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 67674 acatatgaagataaagatggcgactggatgcttgtaggagac 67633
>gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, complete cds Length = 711 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttggagac 447 ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 559 acatatgaagataaagatggcgactggatgcttgtaggagac 600
>emb|AJ627256.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA8 auxin regulated transcriptional repressor (IAA8 gene) Length = 803 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttgg 443 |||||||| || | ||||| |||||||||||||||||| Sbjct: 654 acatatgaggataaggatgctgactggatgcttgttgg 691
>gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regulated protein (IAA1) mRNA, complete cds Length = 1313 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||||| |||||| || ||||||||||| ||||| Sbjct: 733 tatgaagacaaggatggagattggatgcttgtaggaga 770
>gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, complete cds Length = 1261 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttggagac 447 ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 742 acatatgaagataaagatggcgactggatgcttgtaggagac 783
>dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced protein, complete cds, clone: RAFL22-51-M14 Length = 519 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttggagac 447 ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 99 acatatgaagataaagatggcgactggatgcttgtaggagac 140
>gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induced protein IAA16 (At3g04730) mRNA, complete cds Length = 711 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttggagac 447 ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 559 acatatgaagataaagatggcgactggatgcttgtaggagac 600
>emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZF01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttggagac 447 ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 701 acatatgaagataaagatggcgactggatgcttgtaggagac 742
>emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1234 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttggagac 447 ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 730 acatatgaagataaagatggcgactggatgcttgtaggagac 771
>gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete sequence Length = 1140 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttggagac 447 ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 746 acatatgaagataaagatggcgactggatgcttgtaggagac 787
>gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (IAA16) mRNA, complete cds Length = 1169 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 406 acatatgaagacagggatggtgactggatgcttgttggagac 447 ||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 725 acatatgaagataaagatggcgactggatgcttgtaggagac 766
>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071, complete sequence Length = 69786 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgttggaga 446 |||||||| | |||||||||||||||||| || ||||| Sbjct: 23027 tatgaagataaggatggtgactggatgctcgtgggaga 23064
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 421 gatggtgactggatgcttgttggaga 446 ||||||||||||||||| |||||||| Sbjct: 57544 gatggtgactggatgctggttggaga 57569
>gb|U24023.1|AEU24023 Aspidistra elatior 5.8S-26S rDNA internal transcribed spacer 2 (ITS2) Length = 223 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 ccgcgcccgccgcctccccggg 23 |||||||||||||||||||||| Sbjct: 53 ccgcgcccgccgcctccccggg 32
>gb|J03920.1|SOYAUX22 Soybean auxin-regulated protein (Aux22) mRNA, complete cds Length = 1945 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 421 gatggtgactggatgcttgttggaga 446 |||||||| ||||||||||||||||| Sbjct: 1320 gatggtgattggatgcttgttggaga 1345
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ccgcgcccgccgcctccccgg 22 ||||||||||||||||||||| Sbjct: 122981 ccgcgcccgccgcctccccgg 122961
>ref|XM_756140.1| Ustilago maydis 521 hypothetical protein (UM05086.1) partial mRNA Length = 5505 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 aggccgccgccgatgactctg 172 ||||||||||||||||||||| Sbjct: 890 aggccgccgccgatgactctg 910
>gb|AC121909.3| Mus musculus BAC clone RP24-179L9 from chromosome 5, complete sequence Length = 155771 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 cccgcgcccgccgcctccccg 21 ||||||||||||||||||||| Sbjct: 30948 cccgcgcccgccgcctccccg 30968
>gb|BC096526.1| Mus musculus cDNA clone IMAGE:30534447, **** WARNING: chimeric clone **** Length = 4332 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 cccgcgcccgccgcctccccg 21 ||||||||||||||||||||| Sbjct: 288 cccgcgcccgccgcctccccg 268
>ref|XM_776402.1| PREDICTED: Strongylocentrotus purpuratus similar to dentin sialophosphoprotein preproprotein (LOC576056), mRNA Length = 2850 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 aggaggagggcgagaagaagg 208 ||||||||||||||||||||| Sbjct: 1049 aggaggagggcgagaagaagg 1069
>dbj|AK140674.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930082J09 product:unclassifiable, full insert sequence Length = 2808 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 cccgcgcccgccgcctccccg 21 ||||||||||||||||||||| Sbjct: 402 cccgcgcccgccgcctccccg 382
>gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds Length = 1481 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 ggatggtgactggatgcttgt 440 ||||||||||||||||||||| Sbjct: 942 ggatggtgactggatgcttgt 962
>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b, complete sequence Length = 68747 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 413 aagacagggatggtgactggatgct 437 |||||| |||||||||||||||||| Sbjct: 4715 aagacaaggatggtgactggatgct 4691
>ref|NM_112640.2| Arabidopsis thaliana IAA31; transcription factor AT3G17600 (IAA31) mRNA, complete cds Length = 830 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatg 435 ||||||||||||||| |||||| || |||||| Sbjct: 470 tgacatatgaagacaaggatggagattggatg 501
>ref|NM_119006.3| Arabidopsis thaliana IAA11; transcription factor AT4G28640 (IAA11) mRNA, complete cds Length = 1108 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgggatggccaccaataag 85 |||||||||||||||||||| Sbjct: 421 gtgggatggccaccaataag 440
>ref|XM_597378.2| PREDICTED: Bos taurus similar to H2.0-like homeo box 1 (LOC519165), mRNA Length = 1867 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aaagacaaggaggagggcgagaag 204 ||||||||||||| |||||||||| Sbjct: 1433 aaagacaaggaggcgggcgagaag 1456
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 agaaggccgccgccgatgac 168 |||||||||||||||||||| Sbjct: 804788 agaaggccgccgccgatgac 804769
>ref|XM_386138.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05962.1) partial mRNA Length = 1236 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 acaaggaggagggcgagaag 204 |||||||||||||||||||| Sbjct: 1106 acaaggaggagggcgagaag 1125
>gb|AC148405.5| Medicago truncatula clone mth2-37m7, complete sequence Length = 115984 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 tgggtgaaggtgaacatggatggg 246 ||||||||||||||||| |||||| Sbjct: 46588 tgggtgaaggtgaacattgatggg 46565
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cattcaggtatgaacagcctgttc 111 |||||||||||||||| ||||||| Sbjct: 1013630 cattcaggtatgaacaacctgttc 1013607
>gb|BT000543.1| Arabidopsis thaliana putative auxin-induced protein (At3g17600/MKP6_15) mRNA, complete cds Length = 477 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatg 435 ||||||||||||||| |||||| || |||||| Sbjct: 368 tgacatatgaagacaaggatggagattggatg 399
>gb|BT000261.1| Arabidopsis thaliana early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 887 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgggatggccaccaataag 85 |||||||||||||||||||| Sbjct: 268 gtgggatggccaccaataag 287
>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA, complete cds Length = 1126 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgt 440 |||||||||| |||||| || ||||||||||| Sbjct: 598 tatgaagacaaggatggagattggatgcttgt 629
>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA, complete cds Length = 1228 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 ggatggtgactggatgcttgttgg 443 |||||| ||||||||||||||||| Sbjct: 780 ggatggagactggatgcttgttgg 803
>emb|BX294148.1| Pirellula sp. strain 1 complete genome; segment 16/24 Length = 294850 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 aaaccaagaaggccgccgccgatg 166 ||||||||||||| |||||||||| Sbjct: 1632 aaaccaagaaggcggccgccgatg 1609
>emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 69 Length = 197655 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgggatggccaccaataag 85 |||||||||||||||||||| Sbjct: 63743 gtgggatggccaccaataag 63762
>gb|AC159242.2| Mus musculus BAC clone RP24-325A23 from chromosome 13, complete sequence Length = 193570 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gtgaacatggatggggaggt 251 |||||||||||||||||||| Sbjct: 72374 gtgaacatggatggggaggt 72393
>gb|AC025586.4| Genomic sequence for Mus musculus, clone RP23-320C8, complete sequence Length = 185386 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 179 agaaagacaaggaggagggcgagaagaa 206 ||||||| ||||||||||| |||||||| Sbjct: 27861 agaaagagaaggaggagggagagaagaa 27888
>gb|AC068359.11| Homo sapiens chromosome 8, clone RP11-468C1, complete sequence Length = 186457 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cattcaggtatgaacagcctgttc 111 |||||||||||||||| ||||||| Sbjct: 78204 cattcaggtatgaacaacctgttc 78181
>gb|AE005737.1| Caulobacter crescentus CB15 section 63 of 359 of the complete genome Length = 11321 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 agaaggccgccgccgatgac 168 |||||||||||||||||||| Sbjct: 3046 agaaggccgccgccgatgac 3027
>gb|AC106038.3| Homo sapiens chromosome 8, clone RP11-68L18, complete sequence Length = 159024 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 tctgaataccagatgacatatgaa 414 |||||||||| ||||||||||||| Sbjct: 111525 tctgaatacccgatgacatatgaa 111548
>gb|AY099670.1| Arabidopsis thaliana early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 1091 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgggatggccaccaataag 85 |||||||||||||||||||| Sbjct: 407 gtgggatggccaccaataag 426
>gb|AY054274.1| Arabidopsis thaliana AT3g17600/MKP6_15 mRNA, complete cds Length = 806 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatg 435 ||||||||||||||| |||||| || |||||| Sbjct: 446 tgacatatgaagacaaggatggagattggatg 477
>gb|AF332397.1| Arabidopsis thaliana clone C00018 (e) early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 741 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgggatggccaccaataag 85 |||||||||||||||||||| Sbjct: 268 gtgggatggccaccaataag 287
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cattcaggtatgaacagcctgttc 111 |||||||||||||||| ||||||| Sbjct: 1013630 cattcaggtatgaacaacctgttc 1013607
>emb|BX825540.1|CNS0A6DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZA08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 579 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatg 435 ||||||||||||||| |||||| || |||||| Sbjct: 218 tgacatatgaagacaaggatggagattggatg 249
>emb|BX828040.1|CNS0A2WQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH47ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1089 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgggatggccaccaataag 85 |||||||||||||||||||| Sbjct: 421 gtgggatggccaccaataag 440
>gb|AF154652.1| Nicotiana tabacum clone PR39 mRNA sequence Length = 824 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gatggtgactggatgcttgt 440 |||||||||||||||||||| Sbjct: 696 gatggtgactggatgcttgt 715
>dbj|AK118377.1| Arabidopsis thaliana At4g28640 mRNA for putative early auxin-inducible protein 11 (IAA11), complete cds, clone: RAFL19-64-E04 Length = 1093 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgggatggccaccaataag 85 |||||||||||||||||||| Sbjct: 407 gtgggatggccaccaataag 426
>dbj|AB022219.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MKP6 Length = 83233 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 404 tgacatatgaagacagggatggtgactggatg 435 ||||||||||||||| |||||| || |||||| Sbjct: 41459 tgacatatgaagacaaggatggagattggatg 41428
>emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA6 gene) Length = 1206 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 409 tatgaagacagggatggtgactggatgcttgt 440 |||||||||| |||||| || ||||||||||| Sbjct: 889 tatgaagacaaggatggcgattggatgcttgt 920
>emb|AJ417876.1|NTA417876 Nicotiana tabacum mRNA for IAA9 protein Length = 1675 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gatggtgactggatgcttgt 440 |||||||||||||||||||| Sbjct: 1110 gatggtgactggatgcttgt 1129
>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds Length = 884 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 412 gaagacagggatggtgactggatgcttgttgg 443 ||||||| ||||| ||||||||||||||||| Sbjct: 595 gaagacaaagatggagactggatgcttgttgg 626
>gb|U18413.1|ATU18413 Arabidopsis thaliana IAA11 (IAA11) gene, complete cds Length = 998 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgggatggccaccaataag 85 |||||||||||||||||||| Sbjct: 311 gtgggatggccaccaataag 330
>gb|AY669802.1| Arabidopsis thaliana clone C00606 IAA31 (At3g17600) mRNA, complete cds Length = 477 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 404 tgacatatgaagacagggatggtgactggatg 435 ||||||||||||||| |||||| || |||||| Sbjct: 368 tgacatatgaagacaaggatggagattggatg 399
>gb|U24040.1|LMU24040 Liriope muscari 5.8S-26S rDNA internal transcribed spacer 2 (ITS2) Length = 223 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcgcccgccgcctccccggg 23 |||||||||||||||||||| Sbjct: 51 gcgcccgccgcctccccggg 32
>emb|Z22382.1|HSDNASFAP H.sapiens DNA sequence Length = 351 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 cgcccgccgcctccccgggg 24 |||||||||||||||||||| Sbjct: 34 cgcccgccgcctccccgggg 15
>emb|AL592422.11| Mouse DNA sequence from clone RP23-218O16 on chromosome 11, complete sequence Length = 205668 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 179 agaaagacaaggaggagggcgagaagaa 206 ||||||| ||||||||||| |||||||| Sbjct: 113220 agaaagagaaggaggagggagagaagaa 113247
>dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC clone 521F14, complete sequence Length = 116160 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 tctgaataccagatgacatatgaa 414 |||||||||| ||||||||||||| Sbjct: 86282 tctgaatacccgatgacatatgaa 86259 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,847,893 Number of Sequences: 3902068 Number of extensions: 3847893 Number of successful extensions: 84211 Number of sequences better than 10.0: 147 Number of HSP's better than 10.0 without gapping: 149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83643 Number of HSP's gapped (non-prelim): 562 length of query: 447 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 425 effective length of database: 17,147,199,772 effective search space: 7287559903100 effective search space used: 7287559903100 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
