Clone Name | baald07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_472413.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1653 Score = 325 bits (164), Expect = 1e-85 Identities = 269/304 (88%) Strand = Plus / Plus Query: 96 ggaaagggagcgggatcatttttctcagttcatgacggaaggctttacaccatactgtaa 155 ||||||||| || |||||||| || ||||||||||||||||| |||||| |||| |||| Sbjct: 861 ggaaagggaacgtgatcatttctcgcagttcatgacggaaggttttacatcatattgtag 920 Query: 156 aaggaaaagaaaagataaggtatatggcaataacattgagatccaggcatttgctgagat 215 || ||||||| ||||||||||||||| || || || ||||||||||||||||||||||| Sbjct: 921 gagaaaaagaagagataaggtatatgggaacaatatggagatccaggcatttgctgagat 980 Query: 216 gtacaatcgtccaattcacatatattcgtacagtacagatcccattaacatttttcaggg 275 |||||||||||| |||||||||||||| || |||||||| ||||||||||||||||| || Sbjct: 981 gtacaatcgtccgattcacatatattcctatagtacagagcccattaacatttttcaagg 1040 Query: 276 aagttataacacagatgttcctccggttaggttaagttaccatcacggtaaccattataa 335 ||| || || |||||||| ||||| ||||| ||||||||||||| ||||| ||||| || Sbjct: 1041 aagctacaatacagatgtccctccaattaggctaagttaccatcatggtaatcattacaa 1100 Query: 336 ttcagttgttgatcctcgtcggctgacagttggggcaggcctgggatttagctcccttag 395 ||| || |||||||||||| |||||||||| |||||||||||||||||||| |||||||| Sbjct: 1101 ttcggtggttgatcctcgtgggctgacagtaggggcaggcctgggatttagttcccttag 1160 Query: 396 aggg 399 |||| Sbjct: 1161 aggg 1164 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 538 gttgacagggaccaggtgaaggctgcaataaaagctcagcaagatcagcagattgagaa 596 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1174 gttgacagggatcaggtgaaggctgcaataaaagcacagcaagatcagcagattgagaa 1232
>dbj|AK061508.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F06, full insert sequence Length = 1796 Score = 325 bits (164), Expect = 1e-85 Identities = 269/304 (88%) Strand = Plus / Plus Query: 96 ggaaagggagcgggatcatttttctcagttcatgacggaaggctttacaccatactgtaa 155 ||||||||| || |||||||| || ||||||||||||||||| |||||| |||| |||| Sbjct: 847 ggaaagggaacgtgatcatttctcgcagttcatgacggaaggttttacatcatattgtag 906 Query: 156 aaggaaaagaaaagataaggtatatggcaataacattgagatccaggcatttgctgagat 215 || ||||||| ||||||||||||||| || || || ||||||||||||||||||||||| Sbjct: 907 gagaaaaagaagagataaggtatatgggaacaatatggagatccaggcatttgctgagat 966 Query: 216 gtacaatcgtccaattcacatatattcgtacagtacagatcccattaacatttttcaggg 275 |||||||||||| |||||||||||||| || |||||||| ||||||||||||||||| || Sbjct: 967 gtacaatcgtccgattcacatatattcctatagtacagagcccattaacatttttcaagg 1026 Query: 276 aagttataacacagatgttcctccggttaggttaagttaccatcacggtaaccattataa 335 ||| || || |||||||| ||||| ||||| ||||||||||||| ||||| ||||| || Sbjct: 1027 aagctacaatacagatgtccctccaattaggctaagttaccatcatggtaatcattacaa 1086 Query: 336 ttcagttgttgatcctcgtcggctgacagttggggcaggcctgggatttagctcccttag 395 ||| || |||||||||||| |||||||||| |||||||||||||||||||| |||||||| Sbjct: 1087 ttcggtggttgatcctcgtgggctgacagtaggggcaggcctgggatttagttcccttag 1146 Query: 396 aggg 399 |||| Sbjct: 1147 aggg 1150 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 538 gttgacagggaccaggtgaaggctgcaataaaagctcagcaagatcagcagattgagaa 596 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1160 gttgacagggatcaggtgaaggctgcaataaaagcacagcaagatcagcagattgagaa 1218
>dbj|AK101471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040K14, full insert sequence Length = 2463 Score = 317 bits (160), Expect = 2e-83 Identities = 268/304 (88%) Strand = Plus / Plus Query: 96 ggaaagggagcgggatcatttttctcagttcatgacggaaggctttacaccatactgtaa 155 ||||||||| || |||||||| || ||||||||||||||||| |||||| |||| |||| Sbjct: 1516 ggaaagggaacgtgatcatttctcgcagttcatgacggaaggttttacatcatattgtag 1575 Query: 156 aaggaaaagaaaagataaggtatatggcaataacattgagatccaggcatttgctgagat 215 || ||||||| ||||||||||||||| || || || ||||||||||||||||||||||| Sbjct: 1576 gagaaaaagaagagataaggtatatgggaacaatatggagatccaggcatttgctgagat 1635 Query: 216 gtacaatcgtccaattcacatatattcgtacagtacagatcccattaacatttttcaggg 275 |||||||||||| |||||||||||||| || |||||||| ||||||||||||||||| || Sbjct: 1636 gtacaatcgtccgattcacatatattcctatagtacagagcccattaacatttttcaagg 1695 Query: 276 aagttataacacagatgttcctccggttaggttaagttaccatcacggtaaccattataa 335 ||| || || |||||||| ||||| ||||| ||||||||||||| ||||| ||||| || Sbjct: 1696 aagctacaatacagatgtccctccaattaggctaagttaccatcatggtaatcattacaa 1755 Query: 336 ttcagttgttgatcctcgtcggctgacagttggggcaggcctgggatttagctcccttag 395 ||| || |||||||||||| |||||||||| |||||||||||||||||||| ||| |||| Sbjct: 1756 ttcggtggttgatcctcgtgggctgacagtaggggcaggcctgggatttagttcctttag 1815 Query: 396 aggg 399 |||| Sbjct: 1816 aggg 1819 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 538 gttgacagggaccaggtgaaggctgcaataaaagctcagcaagatcagcagattgagaa 596 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1829 gttgacagggatcaggtgaaggctgcaataaaagcacagcaagatcagcagattgagaa 1887
>gb|AY106870.1| Zea mays PCO096778 mRNA sequence Length = 1188 Score = 291 bits (147), Expect = 1e-75 Identities = 269/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 96 ggaaagggagcgggatcatttttctcagttcatgacggaag------gctttacaccata 149 ||||||||| ||||||||||| ||||||||||| || ||| | |||||| ||| Sbjct: 226 ggaaagggaacgggatcatttctctcagttcataactgaaattgaaagttttacattata 285 Query: 150 ctgtaaaaggaaaagaaaagataaggtatatggcaataacattgagatccaggcatttgc 209 |||||| |||||||| | ||||||||| |||||||| || ||||||||||||||||||| Sbjct: 286 ctgtaagaggaaaaggagagataaggtttatggcaacaatgttgagatccaggcatttgc 345 Query: 210 tgagatgtacaatcgtccaattcacatatattcgtacagtacagatcccattaacatttt 269 ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 346 agagatgtacaatcgtcccattcacatatattcctacagtacagagcccattaatatttt 405 Query: 270 tcagggaagttataacacagatgttcctccggttaggttaagttaccatcacggtaacca 329 ||| ||||| ||||||||||| |||||||| |||| |||||||||||||| ||||| || Sbjct: 406 tcaaggaagctataacacagacgttcctccaattagattaagttaccatcatggtaatca 465 Query: 330 ttataattcagttgttgatcctcgtcggctgacagttggggcaggcctgggatttagctc 389 ||| |||||||| |||||||| || |||| ||||||||||||||| || ||||||||||| Sbjct: 466 ttacaattcagtggttgatccccgacggcagacagttggggcaggacttggatttagctc 525 Query: 390 ccttagaggg 399 |||||||||| Sbjct: 526 ccttagaggg 535 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 532 aatagtgttgacagggaccaggtgaaggctgcaataaaagctcagcaagatcagcagatt 591 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 539 aataatgttgacagggaccaggtgaaggctgcaataaaagctcagcaagaccagcaaatt 598 Query: 592 gagaa 596 ||||| Sbjct: 599 gagaa 603
>emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13, complete sequence Length = 113960 Score = 167 bits (84), Expect = 5e-38 Identities = 135/152 (88%) Strand = Plus / Plus Query: 251 cagatcccattaacatttttcagggaagttataacacagatgttcctccggttaggttaa 310 |||| ||||||||||||||||| ||||| || || |||||||| ||||| ||||| ||| Sbjct: 84226 cagagcccattaacatttttcaaggaagctacaatacagatgtccctccaattaggctaa 84285 Query: 311 gttaccatcacggtaaccattataattcagttgttgatcctcgtcggctgacagttgggg 370 |||||||||| ||||| ||||| ||||| || |||||||||||| |||||||||| |||| Sbjct: 84286 gttaccatcatggtaatcattacaattcggtggttgatcctcgtgggctgacagtagggg 84345 Query: 371 caggcctgggatttagctcccttagaggggta 402 |||||||||||||||| ||||||||||||||| Sbjct: 84346 caggcctgggatttagttcccttagaggggta 84377 Score = 107 bits (54), Expect = 4e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 172 aaggtatatggcaataacattgagatccaggcatttgctgagatgtacaatcgtccaatt 231 ||||||||||| || || || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 84053 aaggtatatgggaacaatatggagatccaggcatttgctgagatgtacaatcgtccgatt 84112 Query: 232 cacatatattcgtacagtacag 253 ||||||||||| || ||||||| Sbjct: 84113 cacatatattcctatagtacag 84134 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 538 gttgacagggaccaggtgaaggctgcaataaaagctcagcaagatcagcagattgagaa 596 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 84493 gttgacagggatcaggtgaaggctgcaataaaagcacagcaagatcagcagattgagaa 84551 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 92 tccaggaaagggagcgggatcatttttctcagttcatgacggaaggctttacaccatact 151 ||||||||||||| || |||||||| || ||||||||||||||||| |||||| |||| | Sbjct: 83498 tccaggaaagggaacgtgatcatttctcgcagttcatgacggaaggttttacatcatatt 83557 Query: 152 gtaaaaggaaaagaaaagataaggtat 178 ||| || ||||||| ||||||||||| Sbjct: 83558 gtaggagaaaaagaagagataaggtat 83584
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 167 bits (84), Expect = 5e-38 Identities = 135/152 (88%) Strand = Plus / Plus Query: 251 cagatcccattaacatttttcagggaagttataacacagatgttcctccggttaggttaa 310 |||| ||||||||||||||||| ||||| || || |||||||| ||||| ||||| ||| Sbjct: 20470806 cagagcccattaacatttttcaaggaagctacaatacagatgtccctccaattaggctaa 20470865 Query: 311 gttaccatcacggtaaccattataattcagttgttgatcctcgtcggctgacagttgggg 370 |||||||||| ||||| ||||| ||||| || |||||||||||| |||||||||| |||| Sbjct: 20470866 gttaccatcatggtaatcattacaattcggtggttgatcctcgtgggctgacagtagggg 20470925 Query: 371 caggcctgggatttagctcccttagaggggta 402 |||||||||||||||| ||||||||||||||| Sbjct: 20470926 caggcctgggatttagttcccttagaggggta 20470957 Score = 107 bits (54), Expect = 4e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 172 aaggtatatggcaataacattgagatccaggcatttgctgagatgtacaatcgtccaatt 231 ||||||||||| || || || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 20470633 aaggtatatgggaacaatatggagatccaggcatttgctgagatgtacaatcgtccgatt 20470692 Query: 232 cacatatattcgtacagtacag 253 ||||||||||| || ||||||| Sbjct: 20470693 cacatatattcctatagtacag 20470714 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 538 gttgacagggaccaggtgaaggctgcaataaaagctcagcaagatcagcagattgagaa 596 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 20471073 gttgacagggatcaggtgaaggctgcaataaaagcacagcaagatcagcagattgagaa 20471131 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 92 tccaggaaagggagcgggatcatttttctcagttcatgacggaaggctttacaccatact 151 ||||||||||||| || |||||||| || ||||||||||||||||| |||||| |||| | Sbjct: 20470078 tccaggaaagggaacgtgatcatttctcgcagttcatgacggaaggttttacatcatatt 20470137 Query: 152 gtaaaaggaaaagaaaagataaggtat 178 ||| || ||||||| ||||||||||| Sbjct: 20470138 gtaggagaaaaagaagagataaggtat 20470164
>ref|NM_201816.1| Arabidopsis thaliana cysteine-type peptidase AT2G27350 transcript variant AT2G27350.4 mRNA, complete cds Length = 2259 Score = 79.8 bits (40), Expect = 1e-11 Identities = 220/280 (78%) Strand = Plus / Plus Query: 107 gggatcatttttctcagttcatgacggaaggctttacaccatactgtaaaaggaaaagaa 166 ||||||| |||||||||||||| || ||||| ||||| | |||| || |||||||||| Sbjct: 1308 gggatcacttttctcagttcataaccgaaggttttacctcttacttgaagaggaaaagaa 1367 Query: 167 aagataaggtatatggcaataacattgagatccaggcatttgctgagatgtacaatcgtc 226 ||||||||| ||||| || ||| | |||||||| || || || || ||||||||| | | Sbjct: 1368 gagataaggtctatggaaacaacgtagagatccaagctttagcagaaatgtacaataggc 1427 Query: 227 caattcacatatattcgtacagtacagatcccattaacatttttcagggaagttataaca 286 |||| ||||| || || || || ||||| || || ||||| ||||| |||| || | || Sbjct: 1428 caatccacatttactcatatagcacagagcctatcaacatatttcaaggaaactacagca 1487 Query: 287 cagatgttcctccggttaggttaagttaccatcacggtaaccattataattcagttgttg 346 | ||| ||||| | ||| | |||||||| ||||| || ||||||||||| | || | Sbjct: 1488 cggatacacctcccataaggctgagttaccaccacgggaatcattataattctttggtgg 1547 Query: 347 atcctcgtcggctgacagttggggcaggcctgggatttag 386 |||| | |||| |||||||||| ||||| || |||||||| Sbjct: 1548 atccacatcggttgacagttggtgcaggacttggatttag 1587 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 541 gacagggaccaggtgaaggctgcaataaaagctcagcaaga 581 |||| ||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1610 gacaaggaacaggtgaaagctgctataaaggctcagcaaga 1650
>ref|NM_179768.2| Arabidopsis thaliana cysteine-type peptidase AT2G27350 transcript variant AT2G27350.2 mRNA, complete cds Length = 2049 Score = 79.8 bits (40), Expect = 1e-11 Identities = 220/280 (78%) Strand = Plus / Plus Query: 107 gggatcatttttctcagttcatgacggaaggctttacaccatactgtaaaaggaaaagaa 166 ||||||| |||||||||||||| || ||||| ||||| | |||| || |||||||||| Sbjct: 1104 gggatcacttttctcagttcataaccgaaggttttacctcttacttgaagaggaaaagaa 1163 Query: 167 aagataaggtatatggcaataacattgagatccaggcatttgctgagatgtacaatcgtc 226 ||||||||| ||||| || ||| | |||||||| || || || || ||||||||| | | Sbjct: 1164 gagataaggtctatggaaacaacgtagagatccaagctttagcagaaatgtacaataggc 1223 Query: 227 caattcacatatattcgtacagtacagatcccattaacatttttcagggaagttataaca 286 |||| ||||| || || || || ||||| || || ||||| ||||| |||| || | || Sbjct: 1224 caatccacatttactcatatagcacagagcctatcaacatatttcaaggaaactacagca 1283 Query: 287 cagatgttcctccggttaggttaagttaccatcacggtaaccattataattcagttgttg 346 | ||| ||||| | ||| | |||||||| ||||| || ||||||||||| | || | Sbjct: 1284 cggatacacctcccataaggctgagttaccaccacgggaatcattataattctttggtgg 1343 Query: 347 atcctcgtcggctgacagttggggcaggcctgggatttag 386 |||| | |||| |||||||||| ||||| || |||||||| Sbjct: 1344 atccacatcggttgacagttggtgcaggacttggatttag 1383 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 541 gacagggaccaggtgaaggctgcaataaaagctcagcaaga 581 |||| ||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1406 gacaaggaacaggtgaaagctgctataaaggctcagcaaga 1446
>ref|NM_128294.1| Arabidopsis thaliana cysteine-type peptidase AT2G27350 transcript variant AT2G27350.1 mRNA, complete cds Length = 1913 Score = 79.8 bits (40), Expect = 1e-11 Identities = 220/280 (78%) Strand = Plus / Plus Query: 107 gggatcatttttctcagttcatgacggaaggctttacaccatactgtaaaaggaaaagaa 166 ||||||| |||||||||||||| || ||||| ||||| | |||| || |||||||||| Sbjct: 967 gggatcacttttctcagttcataaccgaaggttttacctcttacttgaagaggaaaagaa 1026 Query: 167 aagataaggtatatggcaataacattgagatccaggcatttgctgagatgtacaatcgtc 226 ||||||||| ||||| || ||| | |||||||| || || || || ||||||||| | | Sbjct: 1027 gagataaggtctatggaaacaacgtagagatccaagctttagcagaaatgtacaataggc 1086 Query: 227 caattcacatatattcgtacagtacagatcccattaacatttttcagggaagttataaca 286 |||| ||||| || || || || ||||| || || ||||| ||||| |||| || | || Sbjct: 1087 caatccacatttactcatatagcacagagcctatcaacatatttcaaggaaactacagca 1146 Query: 287 cagatgttcctccggttaggttaagttaccatcacggtaaccattataattcagttgttg 346 | ||| ||||| | ||| | |||||||| ||||| || ||||||||||| | || | Sbjct: 1147 cggatacacctcccataaggctgagttaccaccacgggaatcattataattctttggtgg 1206 Query: 347 atcctcgtcggctgacagttggggcaggcctgggatttag 386 |||| | |||| |||||||||| ||||| || |||||||| Sbjct: 1207 atccacatcggttgacagttggtgcaggacttggatttag 1246 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 541 gacagggaccaggtgaaggctgcaataaaagctcagcaaga 581 |||| ||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1269 gacaaggaacaggtgaaagctgctataaaggctcagcaaga 1309
>ref|NM_201815.1| Arabidopsis thaliana cysteine-type peptidase AT2G27350 transcript variant AT2G27350.3 mRNA, complete cds Length = 2060 Score = 79.8 bits (40), Expect = 1e-11 Identities = 220/280 (78%) Strand = Plus / Plus Query: 107 gggatcatttttctcagttcatgacggaaggctttacaccatactgtaaaaggaaaagaa 166 ||||||| |||||||||||||| || ||||| ||||| | |||| || |||||||||| Sbjct: 1111 gggatcacttttctcagttcataaccgaaggttttacctcttacttgaagaggaaaagaa 1170 Query: 167 aagataaggtatatggcaataacattgagatccaggcatttgctgagatgtacaatcgtc 226 ||||||||| ||||| || ||| | |||||||| || || || || ||||||||| | | Sbjct: 1171 gagataaggtctatggaaacaacgtagagatccaagctttagcagaaatgtacaataggc 1230 Query: 227 caattcacatatattcgtacagtacagatcccattaacatttttcagggaagttataaca 286 |||| ||||| || || || || ||||| || || ||||| ||||| |||| || | || Sbjct: 1231 caatccacatttactcatatagcacagagcctatcaacatatttcaaggaaactacagca 1290 Query: 287 cagatgttcctccggttaggttaagttaccatcacggtaaccattataattcagttgttg 346 | ||| ||||| | ||| | |||||||| ||||| || ||||||||||| | || | Sbjct: 1291 cggatacacctcccataaggctgagttaccaccacgggaatcattataattctttggtgg 1350 Query: 347 atcctcgtcggctgacagttggggcaggcctgggatttag 386 |||| | |||| |||||||||| ||||| || |||||||| Sbjct: 1351 atccacatcggttgacagttggtgcaggacttggatttag 1390 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 541 gacagggaccaggtgaaggctgcaataaaagctcagcaaga 581 |||| ||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1413 gacaaggaacaggtgaaagctgctataaaggctcagcaaga 1453
>ref|NM_201817.2| Arabidopsis thaliana cysteine-type peptidase AT2G27350 transcript variant AT2G27350.5 mRNA, complete cds Length = 2287 Score = 79.8 bits (40), Expect = 1e-11 Identities = 220/280 (78%) Strand = Plus / Plus Query: 107 gggatcatttttctcagttcatgacggaaggctttacaccatactgtaaaaggaaaagaa 166 ||||||| |||||||||||||| || ||||| ||||| | |||| || |||||||||| Sbjct: 1308 gggatcacttttctcagttcataaccgaaggttttacctcttacttgaagaggaaaagaa 1367 Query: 167 aagataaggtatatggcaataacattgagatccaggcatttgctgagatgtacaatcgtc 226 ||||||||| ||||| || ||| | |||||||| || || || || ||||||||| | | Sbjct: 1368 gagataaggtctatggaaacaacgtagagatccaagctttagcagaaatgtacaataggc 1427 Query: 227 caattcacatatattcgtacagtacagatcccattaacatttttcagggaagttataaca 286 |||| ||||| || || || || ||||| || || ||||| ||||| |||| || | || Sbjct: 1428 caatccacatttactcatatagcacagagcctatcaacatatttcaaggaaactacagca 1487 Query: 287 cagatgttcctccggttaggttaagttaccatcacggtaaccattataattcagttgttg 346 | ||| ||||| | ||| | |||||||| ||||| || ||||||||||| | || | Sbjct: 1488 cggatacacctcccataaggctgagttaccaccacgggaatcattataattctttggtgg 1547 Query: 347 atcctcgtcggctgacagttggggcaggcctgggatttag 386 |||| | |||| |||||||||| ||||| || |||||||| Sbjct: 1548 atccacatcggttgacagttggtgcaggacttggatttag 1587 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 541 gacagggaccaggtgaaggctgcaataaaagctcagcaaga 581 |||| ||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1610 gacaaggaacaggtgaaagctgctataaaggctcagcaaga 1650
>gb|BT008876.1| Arabidopsis thaliana At2g27350 mRNA, complete cds Length = 1518 Score = 79.8 bits (40), Expect = 1e-11 Identities = 220/280 (78%) Strand = Plus / Plus Query: 107 gggatcatttttctcagttcatgacggaaggctttacaccatactgtaaaaggaaaagaa 166 ||||||| |||||||||||||| || ||||| ||||| | |||| || |||||||||| Sbjct: 773 gggatcacttttctcagttcataaccgaaggttttacctcttacttgaagaggaaaagaa 832 Query: 167 aagataaggtatatggcaataacattgagatccaggcatttgctgagatgtacaatcgtc 226 ||||||||| ||||| || ||| | |||||||| || || || || ||||||||| | | Sbjct: 833 gagataaggtctatggaaacaacgtagagatccaagctttagcagaaatgtacaataggc 892 Query: 227 caattcacatatattcgtacagtacagatcccattaacatttttcagggaagttataaca 286 |||| ||||| || || || || ||||| || || ||||| ||||| |||| || | || Sbjct: 893 caatccacatttactcatatagcacagagcctatcaacatatttcaaggaaactacagca 952 Query: 287 cagatgttcctccggttaggttaagttaccatcacggtaaccattataattcagttgttg 346 | ||| ||||| | ||| | |||||||| ||||| || ||||||||||| | || | Sbjct: 953 cggatacacctcccataaggctgagttaccaccacgggaatcattataattctttggtgg 1012 Query: 347 atcctcgtcggctgacagttggggcaggcctgggatttag 386 |||| | |||| |||||||||| ||||| || |||||||| Sbjct: 1013 atccacatcggttgacagttggtgcaggacttggatttag 1052 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 541 gacagggaccaggtgaaggctgcaataaaagctcagcaaga 581 |||| ||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1075 gacaaggaacaggtgaaagctgctataaaggctcagcaaga 1115
>gb|AY058065.1| Arabidopsis thaliana At2g27350/F12K2.7 mRNA, complete cds Length = 1912 Score = 79.8 bits (40), Expect = 1e-11 Identities = 220/280 (78%) Strand = Plus / Plus Query: 107 gggatcatttttctcagttcatgacggaaggctttacaccatactgtaaaaggaaaagaa 166 ||||||| |||||||||||||| || ||||| ||||| | |||| || |||||||||| Sbjct: 966 gggatcacttttctcagttcataaccgaaggttttacctcttacttgaagaggaaaagaa 1025 Query: 167 aagataaggtatatggcaataacattgagatccaggcatttgctgagatgtacaatcgtc 226 ||||||||| ||||| || ||| | |||||||| || || || || ||||||||| | | Sbjct: 1026 gagataaggtctatggaaacaacgtagagatccaagctttagcagaaatgtacaataggc 1085 Query: 227 caattcacatatattcgtacagtacagatcccattaacatttttcagggaagttataaca 286 |||| ||||| || || || || ||||| || || ||||| ||||| |||| || | || Sbjct: 1086 caatccacatttactcatatagcacagagcctatcaacatatttcaaggaaactacagca 1145 Query: 287 cagatgttcctccggttaggttaagttaccatcacggtaaccattataattcagttgttg 346 | ||| ||||| | ||| | |||||||| ||||| || ||||||||||| | || | Sbjct: 1146 cggatacacctcccataaggctgagttaccaccacgggaatcattataattctttggtgg 1205 Query: 347 atcctcgtcggctgacagttggggcaggcctgggatttag 386 |||| | |||| |||||||||| ||||| || |||||||| Sbjct: 1206 atccacatcggttgacagttggtgcaggacttggatttag 1245 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 541 gacagggaccaggtgaaggctgcaataaaagctcagcaaga 581 |||| ||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1268 gacaaggaacaggtgaaagctgctataaaggctcagcaaga 1308
>gb|BT002479.1| Arabidopsis thaliana expressed protein (At2g27350) mRNA, complete cds Length = 2028 Score = 79.8 bits (40), Expect = 1e-11 Identities = 220/280 (78%) Strand = Plus / Plus Query: 107 gggatcatttttctcagttcatgacggaaggctttacaccatactgtaaaaggaaaagaa 166 ||||||| |||||||||||||| || ||||| ||||| | |||| || |||||||||| Sbjct: 1083 gggatcacttttctcagttcataaccgaaggttttacctcttacttgaagaggaaaagaa 1142 Query: 167 aagataaggtatatggcaataacattgagatccaggcatttgctgagatgtacaatcgtc 226 ||||||||| ||||| || ||| | |||||||| || || || || ||||||||| | | Sbjct: 1143 gagataaggtctatggaaacaacgtagagatccaagctttagcagaaatgtacaataggc 1202 Query: 227 caattcacatatattcgtacagtacagatcccattaacatttttcagggaagttataaca 286 |||| ||||| || || || || ||||| || || ||||| ||||| |||| || | || Sbjct: 1203 caatccacatttactcatatagcacagagcctatcaacatatttcaaggaaactacagca 1262 Query: 287 cagatgttcctccggttaggttaagttaccatcacggtaaccattataattcagttgttg 346 | ||| ||||| | ||| | |||||||| ||||| || ||||||||||| | || | Sbjct: 1263 cggatacacctcccataaggctgagttaccaccacgggaatcattataattctttggtgg 1322 Query: 347 atcctcgtcggctgacagttggggcaggcctgggatttag 386 |||| | |||| |||||||||| ||||| || |||||||| Sbjct: 1323 atccacatcggttgacagttggtgcaggacttggatttag 1362 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 541 gacagggaccaggtgaaggctgcaataaaagctcagcaaga 581 |||| ||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1385 gacaaggaacaggtgaaagctgctataaaggctcagcaaga 1425
>emb|BX819095.1|CNS0A9SS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB45ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2123 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 115 ttttctcagttcatgacggaaggctttacaccatactgtaaaaggaaaagaaaagataag 174 |||||||||||||| || ||||| ||||| | |||| || |||||||||| ||||||| Sbjct: 1317 ttttctcagttcataaccgaaggttttacttcttacttgaagaggaaaagaagagataag 1376 Query: 175 gtatatggcaataacattgagatccaggcatttgctgagatgtacaatcgtccaattcac 234 || ||||| || ||| | |||||||| || || || || ||||||||| | ||||| ||| Sbjct: 1377 gtctatggaaacaacgtagagatccaagctttagcagaaatgtacaataggccaatccac 1436 Query: 235 at 236 || Sbjct: 1437 at 1438 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 541 gacagggaccaggtgaaggctgcaataaaagctcagcaaga 581 |||| ||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1611 gacaaggaacaggtgaacgctgctataaaggctcagcaaga 1651
>gb|AY111402.1| Zea mays CL15553_1 mRNA sequence Length = 708 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 556 aaggctgcaataaaagctcagcaagatcagca 587 |||||||||||||||||||||||||| ||||| Sbjct: 23 aaggctgcaataaaagctcagcaagaccagca 54
>gb|AC006233.4| Arabidopsis thaliana chromosome 2 clone F12K2 map B68, complete sequence Length = 88383 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 107 gggatcatttttctcagttcatgacggaaggctttacaccatactgtaaaaggaaaagaa 166 ||||||| |||||||||||||| || ||||| ||||| | |||| || |||||||||| Sbjct: 25429 gggatcacttttctcagttcataaccgaaggttttacctcttacttgaagaggaaaagaa 25488 Query: 167 aagataaggt 176 ||||||||| Sbjct: 25489 gagataaggt 25498 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 310 agttaccatcacggtaaccattataattcagttgttgatcctcgtcggctgacagttggg 369 |||||||| ||||| || ||||||||||| | || ||||| | |||| |||||||||| Sbjct: 25808 agttaccaccacgggaatcattataattctttggtggatccacatcggttgacagttggt 25867 Query: 370 gcaggcctgggatttag 386 ||||| || |||||||| Sbjct: 25868 gcaggacttggatttag 25884 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 541 gacagggaccaggtgaaggctgcaataaaagctcagcaaga 581 |||| ||| |||||||| ||||| ||||| ||||||||||| Sbjct: 26034 gacaaggaacaggtgaaagctgctataaaggctcagcaaga 26074
>gb|AC006232.4| Arabidopsis thaliana chromosome 2 clone F10A12 map B68, complete sequence Length = 90341 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 107 gggatcatttttctcagttcatgacggaaggctttacaccatactgtaaaaggaaaagaa 166 ||||||| |||||||||||||| || ||||| ||||| | |||| || |||||||||| Sbjct: 5994 gggatcacttttctcagttcataaccgaaggttttacctcttacttgaagaggaaaagaa 5935 Query: 167 aagataaggt 176 ||||||||| Sbjct: 5934 gagataaggt 5925 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 310 agttaccatcacggtaaccattataattcagttgttgatcctcgtcggctgacagttggg 369 |||||||| ||||| || ||||||||||| | || ||||| | |||| |||||||||| Sbjct: 5615 agttaccaccacgggaatcattataattctttggtggatccacatcggttgacagttggt 5556 Query: 370 gcaggcctgggatttag 386 ||||| || |||||||| Sbjct: 5555 gcaggacttggatttag 5539 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 541 gacagggaccaggtgaaggctgcaataaaagctcagcaaga 581 |||| ||| |||||||| ||||| ||||| ||||||||||| Sbjct: 5389 gacaaggaacaggtgaaagctgctataaaggctcagcaaga 5349
>emb|CR450685.13| Zebrafish DNA sequence from clone DKEY-83K24 in linkage group 8, complete sequence Length = 195473 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 179 atggcaataacattgagatccaggcatttgctgagatgtacaatcg 224 ||||||| |||||||||| |||||| | || |||||||||||||| Sbjct: 58374 atggcaaccacattgagatgcaggcaatggcagagatgtacaatcg 58419
>emb|CR405713.7| Zebrafish DNA sequence from clone DKEY-12D5 in linkage group 8, complete sequence Length = 99181 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 179 atggcaataacattgagatccaggcatttgctgagatgtacaatcg 224 ||||||| |||||||||| |||||| | || |||||||||||||| Sbjct: 28921 atggcaaccacattgagatgcaggcaatggcagagatgtacaatcg 28876
>gb|AC073882.4| Mus musculus strain 129/SvES Cell Line CJ7 chromosome 2 clone ct7-305f12, complete sequence Length = 130734 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 149 actgtaaaaggaaaagaaaaga 170 |||||||||||||||||||||| Sbjct: 121018 actgtaaaaggaaaagaaaaga 121039
>gb|AC068952.10| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 2 clone ct7-254f1, complete sequence Length = 95292 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 actgtaaaaggaaaagaaaaga 170 |||||||||||||||||||||| Sbjct: 20711 actgtaaaaggaaaagaaaaga 20690
>gb|AC068903.11| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 2 clone ct7-196d19, complete sequence Length = 82033 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 actgtaaaaggaaaagaaaaga 170 |||||||||||||||||||||| Sbjct: 5932 actgtaaaaggaaaagaaaaga 5911
>ref|XM_677958.1| PREDICTED: Danio rerio similar to SI:bZ30I22.1 (novel protein similar to human FLJ12550) (LOC555459), mRNA Length = 1452 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 179 atggcaataacattgagatccaggcatttgctgagatgtacaatcg 224 ||||||| |||||||||| |||||| | || |||||||||||||| Sbjct: 185 atggcaaccacattgagatgcaggcaatggcagagatgtacaatcg 230
>ref|XM_691148.1| PREDICTED: Danio rerio similar to SI:bZ30I22.1 (novel protein similar to human FLJ12550) (LOC567843), mRNA Length = 810 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 179 atggcaataacattgagatccaggcatttgctgagatgtacaatcg 224 ||||||| |||||||||| |||||| | || |||||||||||||| Sbjct: 242 atggcaaccacattgagatgcaggcaatggcagagatgtacaatcg 287
>emb|BX649317.5| Mouse DNA sequence from clone RP23-415G15 on chromosome 2, complete sequence Length = 199584 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 actgtaaaaggaaaagaaaaga 170 |||||||||||||||||||||| Sbjct: 16932 actgtaaaaggaaaagaaaaga 16911
>emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in linkage group 8 Contains part of a novel gene for a protein similar to human FLJ12550, the pim1 gene for pim-1 oncogene (proviral integration site 1), part of a novel gene for a protein similar to vertebrate UDP-galactose transporters, a novel gene for a protein similar to vertebrate caldesmon 1 (CALD1) and a CpG island, complete sequence Length = 140984 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 179 atggcaataacattgagatccaggcatttgctgagatgtacaatcg 224 ||||||| |||||||||| |||||| | || |||||||||||||| Sbjct: 8065 atggcaaccacattgagatgcaggcaatggcagagatgtacaatcg 8110
>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete sequence Length = 218753 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 gcaggcctgggatttagctccc 391 |||||||||||||||||||||| Sbjct: 141686 gcaggcctgggatttagctccc 141707
>emb|AL590636.12| Human DNA sequence from clone RP11-50E19 on chromosome 10 Contains the 3' end of the ITGA8 gene for integrin alpha 8, complete sequence Length = 141790 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 498 taaataaactttcacttcctt 518 ||||||||||||||||||||| Sbjct: 28975 taaataaactttcacttcctt 28955
>emb|AL356495.15| Human DNA sequence from clone RP11-206L1 on chromosome 13 Contains the 5' end of the TRPC4 gene for transient receptor potential cation channel, subfamily C, member 4, a heat shock 60kD protein 1 (chaperonin) (HSPD1) pseudogene and a CpG island, complete sequence Length = 173774 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 aaaaggaaaagaaaagataag 174 ||||||||||||||||||||| Sbjct: 100050 aaaaggaaaagaaaagataag 100070
>emb|AL161637.13| Human DNA sequence from clone RP3-393B19 on chromosome 1p33-34.3 Contains a CpG island, complete sequence Length = 101954 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 ttatttccccattaaccattt 466 ||||||||||||||||||||| Sbjct: 74621 ttatttccccattaaccattt 74641
>gb|AC090233.16| Homo sapiens chromosome 18, clone RP11-675P24, complete sequence Length = 167895 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 taaaaggaaaagaaaagataa 173 ||||||||||||||||||||| Sbjct: 27501 taaaaggaaaagaaaagataa 27481
>gb|AC104365.4| Homo sapiens chromosome 18, clone RP11-108P20, complete sequence Length = 157871 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 taaaaggaaaagaaaagataa 173 ||||||||||||||||||||| Sbjct: 8309 taaaaggaaaagaaaagataa 8329
>gb|AC091647.4| Homo sapiens chromosome 18, clone RP11-635D8, complete sequence Length = 173368 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 tgtaaaaggaaaagaaaagataagg 175 |||||||||||||||||||| |||| Sbjct: 137354 tgtaaaaggaaaagaaaagaaaagg 137330
>gb|AC019239.5|AC019239 Homo sapiens chromosome 18, clone RP11-346H17, complete sequence Length = 165591 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 tgtaaaaggaaaagaaaagataagg 175 |||||||||||||||||||| |||| Sbjct: 107926 tgtaaaaggaaaagaaaagaaaagg 107902
>emb|BX821389.1|CNS0A9BM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZB05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 683 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 541 gacagggaccaggtgaaggctgcaataaaagctcagcaaga 581 |||| ||| |||||||| ||||| ||||| ||||||||||| Sbjct: 105 gacaaggaacaggtgaaagctgctataaaggctcagcaaga 145 Score = 42.1 bits (21), Expect = 2.1 Identities = 63/77 (81%) Strand = Plus / Plus Query: 310 agttaccatcacggtaaccattataattcagttgttgatcctcgtcggctgacagttggg 369 |||||||| ||||| || ||||||||||| | || ||||| | |||| ||||||| || Sbjct: 5 agttaccaccacgggaatcattataattctttggtggatccacatcggttgacagtcggt 64 Query: 370 gcaggcctgggatttag 386 ||||| || |||||||| Sbjct: 65 gcaggacttggatttag 81
>gb|AC009297.4| Homo sapiens BAC clone RP11-3E14 from 2, complete sequence Length = 91745 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 aaataaactttcacttccttg 519 ||||||||||||||||||||| Sbjct: 5002 aaataaactttcacttccttg 5022
>emb|AL592482.6| Mouse DNA sequence from clone RP23-220K2 on chromosome 1, complete sequence Length = 124174 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 155 aaaggaaaagaaaagataaggtatatggc 183 ||||| |||| |||||||||||||||||| Sbjct: 5856 aaaggcaaaggaaagataaggtatatggc 5884
>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19, complete sequence Length = 174752 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 aaaaggaaaagaaaagataa 173 |||||||||||||||||||| Sbjct: 160259 aaaaggaaaagaaaagataa 160240
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 617403 taaaaggaaaagaaaagata 617422
>gb|AF121351.2| Mus musculus chromosome X clone CT7-228O4 complete sequence Length = 123212 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gtaaaaggaaaagaaaagataagg 175 ||||||||||||||||||| |||| Sbjct: 91626 gtaaaaggaaaagaaaagaaaagg 91649
>gb|AC091473.2| Mus musculus chromosome X clones RP21-114F21, RP21-430D6 complete sequence Length = 221860 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gtaaaaggaaaagaaaagataagg 175 ||||||||||||||||||| |||| Sbjct: 35097 gtaaaaggaaaagaaaagaaaagg 35120
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 627116 taaaaggaaaagaaaagata 627135
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 627159 taaaaggaaaagaaaagata 627178
>gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, complete sequence Length = 207139 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 172739 taaaaggaaaagaaaagata 172758
>emb|CR759732.9| Zebrafish DNA sequence from clone DKEY-183E23 in linkage group 14, complete sequence Length = 225630 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 actgtaaaaggaaaagaaaa 168 |||||||||||||||||||| Sbjct: 52715 actgtaaaaggaaaagaaaa 52696
>ref|XM_750498.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g12590) partial mRNA Length = 1794 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 tgacagggaccaggtgaagg 559 |||||||||||||||||||| Sbjct: 1377 tgacagggaccaggtgaagg 1358
>emb|CR391921.18| Zebrafish DNA sequence from clone CH211-185O22 in linkage group 19, complete sequence Length = 132783 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 ttgtgatggatggttttgtg 485 |||||||||||||||||||| Sbjct: 120884 ttgtgatggatggttttgtg 120865
>gb|AC140316.3| Mus musculus BAC clone RP23-419L10 from chromosome 18, complete sequence Length = 195911 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 172460 taaaaggaaaagaaaagata 172441
>emb|Z70718.1|CEC04G2 Caenorhabditis elegans Cosmid C04G2, complete sequence Length = 33830 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 ttttgtgaactgtttgtgtt 498 |||||||||||||||||||| Sbjct: 22465 ttttgtgaactgtttgtgtt 22484
>gb|AC122048.2| Mus musculus BAC clone RP24-456G2 from 2, complete sequence Length = 153772 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 150375 taaaaggaaaagaaaagata 150356
>gb|AC003091.1| Homo sapiens BAC clone CTA-326G4 from 7, complete sequence Length = 137817 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 aaaaggaaaagaaaagataa 173 |||||||||||||||||||| Sbjct: 53902 aaaaggaaaagaaaagataa 53921
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 614826 taaaaggaaaagaaaagata 614845
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aaggaaaagaaaagataagg 175 |||||||||||||||||||| Sbjct: 481301 aaggaaaagaaaagataagg 481320 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aaggaaaagaaaagataagg 175 |||||||||||||||||||| Sbjct: 158281 aaggaaaagaaaagataagg 158300
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aaggaaaagaaaagataagg 175 |||||||||||||||||||| Sbjct: 480459 aaggaaaagaaaagataagg 480478 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aaggaaaagaaaagataagg 175 |||||||||||||||||||| Sbjct: 157307 aaggaaaagaaaagataagg 157326
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aaggaaaagaaaagataagg 175 |||||||||||||||||||| Sbjct: 480455 aaggaaaagaaaagataagg 480474 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aaggaaaagaaaagataagg 175 |||||||||||||||||||| Sbjct: 157307 aaggaaaagaaaagataagg 157326
>emb|AL357673.12| Human DNA sequence from clone RP11-446E24 on chromosome 1 Contains a novel protein, two novel genes and the 5' end of the MRPL37 gene for mitochondrial ribosomal protein L37, complete sequence Length = 93717 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 aaaggaaaagaaaagataag 174 |||||||||||||||||||| Sbjct: 71574 aaaggaaaagaaaagataag 71593
>emb|AL354674.5| Human DNA sequence from clone RP11-629E24 on chromosome 13 Contains a novel gene and a CpG island, complete sequence Length = 137347 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 aactgtttgtgttaaataaa 505 |||||||||||||||||||| Sbjct: 59586 aactgtttgtgttaaataaa 59567
>emb|AL139819.8| Human DNA sequence from clone RP11-34D15 on chromosome 10 Contains the 5' end of gene FLJ30135, the PKD2L1 gene for polycystic kidney disease 2-like 1, the SCD gene for stearoyl-CoA desaturase (delta-9-desturase), two novel genes and two CpG islands, complete sequence Length = 115278 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 aaaaggaaaagaaaagataa 173 |||||||||||||||||||| Sbjct: 25694 aaaaggaaaagaaaagataa 25675
>emb|AL034402.9|HS30G7 Human DNA sequence from clone RP1-30G7 on chromosome Xp11.3-11.4 Contains a novel gene, an actin, beta (ACTB) pseudogene and a CpG island, complete sequence Length = 123637 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 aaaaggaaaagaaaagataa 173 |||||||||||||||||||| Sbjct: 48827 aaaaggaaaagaaaagataa 48846
>gb|AC158926.4| Mus musculus chromosome 3, clone RP24-93J4, complete sequence Length = 185247 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tgtaaaaggaaaagaaaaga 170 |||||||||||||||||||| Sbjct: 12732 tgtaaaaggaaaagaaaaga 12713
>emb|AL021155.1|HS934G17 Human DNA sequence from clone RP5-934G17 on chromosome 1p36.21 Contains the 3' end of the CLCN6 gene for chloride channel 6, two novel genes, the NPPA gene for natriuretic peptide precursor A, the NPPB gene for natriuretic peptide precursor B, a pseudogene similar to part of SET binding factor 1 (SBF1) and the 3' end of a novel gene, complete sequence Length = 107603 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 gggaccaggtgaaggctgca 564 |||||||||||||||||||| Sbjct: 65365 gggaccaggtgaaggctgca 65384
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 aaaaggaaaagaaaagataa 173 |||||||||||||||||||| Sbjct: 395201 aaaaggaaaagaaaagataa 395182
>gb|AC155716.7| Mus musculus 10 BAC RP24-177O15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154016 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 45502 taaaaggaaaagaaaagata 45483
>emb|BX572644.6| Mouse DNA sequence from clone RP24-33B9 on chromosome 11, complete sequence Length = 30606 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gcaggcctgggatttagctc 389 |||||||||||||||||||| Sbjct: 3598 gcaggcctgggatttagctc 3617
>gb|AC165178.2| Zea mays clone ZMMBBb-272P17, complete sequence Length = 131485 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 accattttgtgatggatggt 479 |||||||||||||||||||| Sbjct: 32559 accattttgtgatggatggt 32540
>gb|AC097656.5| Homo sapiens BAC clone RP11-358D13 from 4, complete sequence Length = 81434 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 tttgtgttaaataaactttc 510 |||||||||||||||||||| Sbjct: 63710 tttgtgttaaataaactttc 63691
>gb|AC112654.2| Homo sapiens X BAC RP11-44F2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107921 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 ctgtaaaaggaaaagaaaagataaggta 177 |||| ||||||||| ||||||||||||| Sbjct: 16926 ctgtgaaaggaaaaaaaaagataaggta 16953
>gb|AC005831.1| Homo sapiens 12p13.3 PAC RPCI5-1180D12 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 144515 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 tgtaaaaggaaaagaaaagataag 174 |||||||||||||||| ||||||| Sbjct: 92345 tgtaaaaggaaaagaagagataag 92322
>gb|AC093278.2| Homo sapiens chromosome 5 clone RP11-389C8, complete sequence Length = 171858 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 attatttccccattaaccattttg 468 |||||||||||||||||| ||||| Sbjct: 105975 attatttccccattaacctttttg 105952
>gb|AC101979.13| Mus musculus chromosome 3, clone RP24-338A7, complete sequence Length = 161025 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tgtaaaaggaaaagaaaaga 170 |||||||||||||||||||| Sbjct: 58390 tgtaaaaggaaaagaaaaga 58371
>emb|BX247946.6| Zebrafish DNA sequence from clone CH211-231B5 in linkage group 14, complete sequence Length = 156559 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 actgtaaaaggaaaagaaaa 168 |||||||||||||||||||| Sbjct: 34332 actgtaaaaggaaaagaaaa 34351
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 taaaaggaaaagaaaagataaggt 176 |||||||||||||||||| ||||| Sbjct: 4154606 taaaaggaaaagaaaagaaaaggt 4154583
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 aagaaaagataaggtatatggcaa 185 ||||||||||||| |||||||||| Sbjct: 1814762 aagaaaagataagctatatggcaa 1814785
>dbj|AK042441.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630091O15 product:unclassifiable, full insert sequence Length = 4244 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 3800 taaaaggaaaagaaaagata 3819
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 aaaaggaaaagaaaagataa 173 |||||||||||||||||||| Sbjct: 395201 aaaaggaaaagaaaagataa 395182
>gb|AC159029.1| Pan troglodytes BAC clone CH251-407C14 from chromosome unknown, complete sequence Length = 175795 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 aactgtttgtgttaaataaa 505 |||||||||||||||||||| Sbjct: 76019 aactgtttgtgttaaataaa 76000
>gb|AF195775.1|AF195775 Candida albicans high-affinity iron permease CaFTR1 gene, complete cds Length = 2400 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 attatttccccattaaccat 464 |||||||||||||||||||| Sbjct: 1764 attatttccccattaaccat 1745
>emb|BX005465.14| Mouse DNA sequence from clone RP23-66N12 on chromosome X, complete sequence Length = 228819 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 aaaaggaaaagaaaagataa 173 |||||||||||||||||||| Sbjct: 164354 aaaaggaaaagaaaagataa 164373
>gb|AC007489.3|AC007489 Homo sapiens chromosome 16 clone RP11-122K22, complete sequence Length = 180401 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 ccttgtgtgtatagaccaat 534 |||||||||||||||||||| Sbjct: 102715 ccttgtgtgtatagaccaat 102696
>emb|AJ330863.1|HSA330863 Homo sapiens genomic sequence surrounding NotI site, clone NL1-DJ3C Length = 624 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 catgacggaaggctttacac 145 |||||||||||||||||||| Sbjct: 384 catgacggaaggctttacac 365
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 627116 taaaaggaaaagaaaagata 627135
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 701504 taaaaggaaaagaaaagata 701523
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 aaaaggaaaagaaaagataa 173 |||||||||||||||||||| Sbjct: 395198 aaaaggaaaagaaaagataa 395179
>gb|AC140942.1| Gallus gallus BAC clone TAM32-50C11 from chromosome ul, complete sequence Length = 140346 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 492 ttgtgttaaataaactttcacttc 515 |||| ||||||||||||||||||| Sbjct: 106559 ttgttttaaataaactttcacttc 106582
>gb|AC147718.1| Gallus gallus BAC clone CH261-18A20 from chromosome unknown, complete sequence Length = 185989 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 492 ttgtgttaaataaactttcacttc 515 |||| ||||||||||||||||||| Sbjct: 176036 ttgttttaaataaactttcacttc 176013
>emb|AL935131.7| Zebrafish DNA sequence from clone CH211-276G21, complete sequence Length = 170938 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 actgtaaaaggaaaagaaaa 168 |||||||||||||||||||| Sbjct: 45977 actgtaaaaggaaaagaaaa 45958
>gb|AC159462.6| Mus musculus BAC clone RP23-177D16 from chromosome 10, complete sequence Length = 200663 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 71727 taaaaggaaaagaaaagata 71708
>emb|AL928905.7| Mouse DNA sequence from clone RP23-70E24 on chromosome 2, complete sequence Length = 135286 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 taaaaggaaaagaaaagata 172 |||||||||||||||||||| Sbjct: 74906 taaaaggaaaagaaaagata 74887
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aaggaaaagaaaagataagg 175 |||||||||||||||||||| Sbjct: 480305 aaggaaaagaaaagataagg 480324 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aaggaaaagaaaagataagg 175 |||||||||||||||||||| Sbjct: 157204 aaggaaaagaaaagataagg 157223
>emb|AL645668.15| Mouse DNA sequence from clone RP23-32L21 on chromosome 4, complete sequence Length = 143213 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 aaaggaaaagaaaagataag 174 |||||||||||||||||||| Sbjct: 43669 aaaggaaaagaaaagataag 43650 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,659,282 Number of Sequences: 3902068 Number of extensions: 6659282 Number of successful extensions: 154297 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 153595 Number of HSP's gapped (non-prelim): 702 length of query: 621 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 598 effective length of database: 17,143,297,704 effective search space: 10251692026992 effective search space used: 10251692026992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)