ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalc06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193389.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1296 Score = 771 bits (389), Expect = 0.0 Identities = 577/642 (89%) Strand = Plus / Plus Query: 3 gttgctggtcaagtagctgcacttgtgttatgccatacacgagagttggcataccagatt 62 |||||||||||||| | |||||||||| |||| || ||| | ||| | || ||||||||| Sbjct: 343 gttgctggtcaagttggtgcacttgtgctatgtcacacaagggagctagcttaccagatt 402 Query: 63 tgccatgaattcgagaggtttagcaagtacctgtcagaaactaaagttgctgtcttctat 122 ||||||||||| |||||||||||||||||||| | || |||||||| ||||||||| Sbjct: 403 tgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgcggtcttctat 462 Query: 123 ggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaatgccctcacattgtg 182 |||||||||||||| ||||||||| | ||||||||||| |||||||| |||||| Sbjct: 463 ggtggtgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcatattgtg 522 Query: 183 gttggcacacctggaaggatcctagctctggctagagacaaggacctttcattgaagaat 242 ||||| |||||||||||||| |||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 523 gttggaacacctggaaggatactagctctagctagagagaaggatctttccttgaagaat 582 Query: 243 gtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcga 302 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 583 gtgaggcatttcattcttgatgaatgtgacaagatgctcgattcacttgacatgcgtaga 642 Query: 303 gatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagca 362 ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 643 gatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatgatgttttcagcg 702 Query: 363 acactcagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaaatt 422 || || ||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 703 acccttagcaaggagatccgcccagtttgcaagaaattcatgcaagatcctatggaaatt 762 Query: 423 tatgttgatgacgaggctaaactgacccttcatggtctagttcagcactatattaaacta 482 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 763 tatgttgatgatgaggctaaactgacccttcatgggctagttcagcactatattaaacta 822 Query: 483 agtgaggcggagaagaatcgaaaattgaatgatctcttagatgcgctcgacttcaaccaa 542 ||||||||||||||||| || ||||||||||||||||||||||| || |||||||| ||| Sbjct: 823 agtgaggcggagaagaaccggaaattgaatgatctcttagatgcactggacttcaatcaa 882 Query: 543 attgtgatatttgttaaaagtgttggtagggcttcagaacttaacaggctgctctgtgaa 602 ||||||||||||||||||||||| |||| ||| ||||||| |||| |||||| |||||| Sbjct: 883 gttgtgatatttgttaaaagtgttagtagagctgcagaactgaacaagctgctttgtgaa 942 Query: 603 tgcaattttcctgcaatctgcatacattctggaatgacacag 644 ||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 943 tgcaactttcctgcgatctccatacattctggaatgacacag 984
>dbj|AK067431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107H03, full insert sequence Length = 1866 Score = 763 bits (385), Expect = 0.0 Identities = 576/642 (89%) Strand = Plus / Plus Query: 3 gttgctggtcaagtagctgcacttgtgttatgccatacacgagagttggcataccagatt 62 |||||||||||||| | |||||||||| |||| || ||| | ||| | || ||||||||| Sbjct: 539 gttgctggtcaagttggtgcacttgtgctatgtcacacaagggagctagcttaccagatt 598 Query: 63 tgccatgaattcgagaggtttagcaagtacctgtcagaaactaaagttgctgtcttctat 122 ||||||||||| |||||||||||||||||||| | || |||||||| ||||||||| Sbjct: 599 tgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgcggtcttctat 658 Query: 123 ggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaatgccctcacattgtg 182 |||||||||||||| ||||||||| | ||||||||||| |||||||| |||||| Sbjct: 659 ggtggtgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcatattgtg 718 Query: 183 gttggcacacctggaaggatcctagctctggctagagacaaggacctttcattgaagaat 242 ||||| |||||||||||||| |||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 719 gttggaacacctggaaggatactagctctagctagagagaaggatctttccttgaagaat 778 Query: 243 gtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcga 302 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 779 gtgaggcatttcattcttgatgaatgtgacaagatgctcgattcacttgacatgcgtaga 838 Query: 303 gatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagca 362 ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 839 gatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatgatgttttcagcg 898 Query: 363 acactcagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaaatt 422 || || ||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 899 acccttagcaaggagatccgcccagtttgcaagaaattcatgcaagatcctatggaaatt 958 Query: 423 tatgttgatgacgaggctaaactgacccttcatggtctagttcagcactatattaaacta 482 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 959 tatgttgatgatgaggctaaactgacccttcatgggctagttcagcactatattaaacta 1018 Query: 483 agtgaggcggagaagaatcgaaaattgaatgatctcttagatgcgctcgacttcaaccaa 542 ||||||||||||||||| || ||||||||||||||||||||||| || |||||||| ||| Sbjct: 1019 agtgaggcggagaagaaccggaaattgaatgatctcttagatgcactggacttcaatcaa 1078 Query: 543 attgtgatatttgttaaaagtgttggtagggcttcagaacttaacaggctgctctgtgaa 602 | ||||||||||||||||||||| |||| ||| ||||||| |||| |||||| |||||| Sbjct: 1079 gtcgtgatatttgttaaaagtgttagtagagctgcagaactgaacaagctgctttgtgaa 1138 Query: 603 tgcaattttcctgcaatctgcatacattctggaatgacacag 644 ||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 1139 tgcaactttcctgcgatctccatacattctggaatgacacag 1180
>ref|NM_193392.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1365 Score = 724 bits (365), Expect = 0.0 Identities = 571/642 (88%) Strand = Plus / Plus Query: 3 gttgctggtcaagtagctgcacttgtgttatgccatacacgagagttggcataccagatt 62 |||||||||||||| | |||||||||| |||| || ||| | ||| | || ||||||||| Sbjct: 382 gttgctggtcaagttggtgcacttgtgctatgtcacacaagggagctagcttaccagatt 441 Query: 63 tgccatgaattcgagaggtttagcaagtacctgtcagaaactaaagttgctgtcttctat 122 ||||||||||| |||||||||||||||||||| | || |||||||||||||||||| Sbjct: 442 tgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgctgtcttctat 501 Query: 123 ggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaatgccctcacattgtg 182 ||||| |||||||| ||||||||| | ||||||||||| |||||||| |||||| Sbjct: 502 ggtggcgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcatattgtg 561 Query: 183 gttggcacacctggaaggatcctagctctggctagagacaaggacctttcattgaagaat 242 ||||| |||||||||||||| || ||||| |||||||| ||||| ||||| ||||||||| Sbjct: 562 gttggaacacctggaaggatacttgctctagctagagaaaaggatctttccttgaagaat 621 Query: 243 gtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcga 302 |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| || Sbjct: 622 gtgaggcatttcattcttgatgaatgtgacaagatgctcgattcgcttgatatgcgtaga 681 Query: 303 gatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagca 362 ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 682 gatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatgatgttttcagcg 741 Query: 363 acactcagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaaatt 422 || || ||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 742 acccttagcaaggagatccgcccagtttgcaagaaattcatgcaagatcctatggaaatt 801 Query: 423 tatgttgatgacgaggctaaactgacccttcatggtctagttcagcactatattaaacta 482 ||||||||||| |||||||||||||||||||| || || |||||||||||||| |||||| Sbjct: 802 tatgttgatgatgaggctaaactgacccttcacgggcttgttcagcactatataaaacta 861 Query: 483 agtgaggcggagaagaatcgaaaattgaatgatctcttagatgcgctcgacttcaaccaa 542 ||||||||||||||||| || ||||||||||||||||||||||| || |||||||| ||| Sbjct: 862 agtgaggcggagaagaaccggaaattgaatgatctcttagatgcacttgacttcaatcaa 921 Query: 543 attgtgatatttgttaaaagtgttggtagggcttcagaacttaacaggctgctctgtgaa 602 ||||||||||||||||||||||| |||| ||| ||||||| |||| |||||| |||||| Sbjct: 922 gttgtgatatttgttaaaagtgttagtagagctgcagaactgaacaagctgctttgtgaa 981 Query: 603 tgcaattttcctgcaatctgcatacattctggaatgacacag 644 ||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 982 tgcaactttcctgcgatctccatacattctggaatgacacag 1023
>dbj|AK122050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G10, full insert sequence Length = 1731 Score = 724 bits (365), Expect = 0.0 Identities = 571/642 (88%) Strand = Plus / Plus Query: 3 gttgctggtcaagtagctgcacttgtgttatgccatacacgagagttggcataccagatt 62 |||||||||||||| | |||||||||| |||| || ||| | ||| | || ||||||||| Sbjct: 434 gttgctggtcaagttggtgcacttgtgctatgtcacacaagggagctagcttaccagatt 493 Query: 63 tgccatgaattcgagaggtttagcaagtacctgtcagaaactaaagttgctgtcttctat 122 ||||||||||| |||||||||||||||||||| | || |||||||||||||||||| Sbjct: 494 tgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgctgtcttctat 553 Query: 123 ggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaatgccctcacattgtg 182 ||||| |||||||| ||||||||| | ||||||||||| |||||||| |||||| Sbjct: 554 ggtggcgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcatattgtg 613 Query: 183 gttggcacacctggaaggatcctagctctggctagagacaaggacctttcattgaagaat 242 ||||| |||||||||||||| || ||||| |||||||| ||||| ||||| ||||||||| Sbjct: 614 gttggaacacctggaaggatacttgctctagctagagaaaaggatctttccttgaagaat 673 Query: 243 gtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcga 302 |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| || Sbjct: 674 gtgaggcatttcattcttgatgaatgtgacaagatgctcgattcgcttgatatgcgtaga 733 Query: 303 gatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagca 362 ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 734 gatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatgatgttttcagcg 793 Query: 363 acactcagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaaatt 422 || || ||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 794 acccttagcaaggagatccgcccagtttgcaagaaattcatgcaagatcctatggaaatt 853 Query: 423 tatgttgatgacgaggctaaactgacccttcatggtctagttcagcactatattaaacta 482 ||||||||||| |||||||||||||||||||| || || |||||||||||||| |||||| Sbjct: 854 tatgttgatgatgaggctaaactgacccttcacgggcttgttcagcactatataaaacta 913 Query: 483 agtgaggcggagaagaatcgaaaattgaatgatctcttagatgcgctcgacttcaaccaa 542 ||||||||||||||||| || ||||||||||||||||||||||| || |||||||| ||| Sbjct: 914 agtgaggcggagaagaaccggaaattgaatgatctcttagatgcacttgacttcaatcaa 973 Query: 543 attgtgatatttgttaaaagtgttggtagggcttcagaacttaacaggctgctctgtgaa 602 ||||||||||||||||||||||| |||| ||| ||||||| |||| |||||| |||||| Sbjct: 974 gttgtgatatttgttaaaagtgttagtagagctgcagaactgaacaagctgctttgtgaa 1033 Query: 603 tgcaattttcctgcaatctgcatacattctggaatgacacag 644 ||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 1034 tgcaactttcctgcgatctccatacattctggaatgacacag 1075
>gb|AY111309.1| Zea mays CL2925_2 mRNA sequence Length = 1457 Score = 575 bits (290), Expect = e-161 Identities = 554/638 (86%) Strand = Plus / Plus Query: 3 gttgctggtcaagtagctgcacttgtgttatgccatacacgagagttggcataccagatt 62 |||||||| |||||||||||||||||||| ||||| ||| |||| || || ||||||||| Sbjct: 168 gttgctggccaagtagctgcacttgtgttgtgccacacaagagaattagcttaccagatt 227 Query: 63 tgccatgaattcgagaggtttagcaagtacctgtcagaaactaaagttgctgtcttctat 122 ||||||||||| |||||||||||||| |||||| | ||| | ||| ||||| |||||| Sbjct: 228 tgccatgaatttgagaggtttagcaaatacctgcctgaattaagagtagctgttttctat 287 Query: 123 ggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaatgccctcacattgtg 182 |||||||||||||||||||| ||||||||| | ||||||||||||| | |||||| Sbjct: 288 ggtggtgttcacatnnnnnnccacaaggatctgctgaagaatgaatgnnnnnatattgtg 347 Query: 183 gttggcacacctggaaggatcctagctctggctagagacaaggacctttcattgaagaat 242 |||||||| ||||||||||| |||||||| |||||||| |||||||| | ||||||||| Sbjct: 348 gttggcacgcctggaaggatactagctctagctagagataaggacctccccttgaagaat 407 Query: 243 gtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcga 302 |||||||||||||||||||||||||||||||||||||| || |||||||||||||| || Sbjct: 408 gtgaggcatttcattcttgatgaatgtgacaagatgctcgaatcacttgacatgcgcaga 467 Query: 303 gatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagca 362 |||||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||| Sbjct: 468 gatgtccaggagatcttcaaaatgactccgcatgataagcaagtgatgatgttttcagca 527 Query: 363 acactcagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaaatt 422 |||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 528 acactcagcaaggagattcgacctgtttgcaagaaatttatgcaagatcctatggaaata 587 Query: 423 tatgttgatgacgaggctaaactgacccttcatggtctagttcagcactatattaaacta 482 ||||||||||| ||||| || ||||||| |||||||| || ||||||||||| ||||| Sbjct: 588 tatgttgatgatgaggcaaagttgaccctccatggtcttgtacagcactatataaaactt 647 Query: 483 agtgaggcggagaagaatcgaaaattgaatgatctcttagatgcgctcgacttcaaccaa 542 |||||||| |||||||| || ||| ||||||||||||| || || || || ||||||||| Sbjct: 648 agtgaggcagagaagaaccggaaactgaatgatctcttggacgctcttgatttcaaccaa 707 Query: 543 attgtgatatttgttaaaagtgttggtagggcttcagaacttaacaggctgctctgtgaa 602 |||||||||| || || |||||| | || ||| | ||||| || | | | || |||||| Sbjct: 708 gttgtgatattcgtgaagagtgttagcagagctgccgaactgaataagttactttgtgaa 767 Query: 603 tgcaattttcctgcaatctgcatacattctggaatgac 640 ||||| || || |||||||||| |||||||||||||| Sbjct: 768 tgcaacttcccatcaatctgcattcattctggaatgac 805
>dbj|AK071356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097G12, full insert sequence Length = 1043 Score = 535 bits (270), Expect = e-149 Identities = 357/386 (92%) Strand = Plus / Plus Query: 259 ttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatct 318 |||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||| Sbjct: 2 ttgatgaatgtgacaagatgctcgattcacttgacatgcgtagagatgtgcaggagatct 61 Query: 319 tcaagatgacaccccatgataaacaagtgatgatgttttcagcaacactcagcaaggaga 378 |||| ||||||||||||||||| |||||||||||||||||||| || || |||||||||| Sbjct: 62 tcaaaatgacaccccatgataagcaagtgatgatgttttcagcgacccttagcaaggaga 121 Query: 379 ttcgcccggtttgcaagaaatttatgcaagatcccatggaaatttatgttgatgacgagg 438 | ||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||| Sbjct: 122 tccgcccagtttgcaagaaattcatgcaagatcctatggaaatttatgttgatgatgagg 181 Query: 439 ctaaactgacccttcatggtctagttcagcactatattaaactaagtgaggcggagaaga 498 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 182 ctaaactgacccttcatgggctagttcagcactatattaaactaagtgaggcggagaaga 241 Query: 499 atcgaaaattgaatgatctcttagatgcgctcgacttcaaccaaattgtgatatttgtta 558 | || ||||||||||||||||||||||| || |||||||| ||| ||||||||||||||| Sbjct: 242 accggaaattgaatgatctcttagatgcactggacttcaatcaagttgtgatatttgtta 301 Query: 559 aaagtgttggtagggcttcagaacttaacaggctgctctgtgaatgcaattttcctgcaa 618 |||||||| |||| ||| ||||||| |||| |||||| ||||||||||| |||||||| | Sbjct: 302 aaagtgttagtagagctgcagaactgaacaagctgctttgtgaatgcaactttcctgcga 361 Query: 619 tctgcatacattctggaatgacacag 644 ||| |||||||||||||||||||||| Sbjct: 362 tctccatacattctggaatgacacag 387
>gb|AY103872.1| Zea mays PCO139073 mRNA sequence Length = 1785 Score = 446 bits (225), Expect = e-122 Identities = 533/638 (83%) Strand = Plus / Plus Query: 3 gttgctggtcaagtagctgcacttgtgttatgccatacacgagagttggcataccagatt 62 ||||| ||||| ||||| |||||||| | ||||| ||| | || |||| || ||||| Sbjct: 539 gttgcgggtcaggtagcagcacttgtactgtgccacacaagggaactggcttatcagata 598 Query: 63 tgccatgaattcgagaggtttagcaagtacctgtcagaaactaaagttgctgtcttctat 122 ||||| ||||| |||||||| ||||| || || | ||| ||||||||||||||||||| Sbjct: 599 tgccacgaatttgagaggttcagcaaatatcttactgaagttaaagttgctgtcttctat 658 Query: 123 ggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaatgccctcacattgtg 182 || ||||||||||| || || ||||| |||||||||||||||||||| |||||| Sbjct: 659 ggaggtgttcacatcaggaagcataaagatttgttgaagaatgaatgccctcatattgtg 718 Query: 183 gttggcacacctggaaggatcctagctctggctagagacaaggacctttcattgaagaat 242 |||||||| ||||| ||||| || ||||| || || || ||||| || || ||||||||| Sbjct: 719 gttggcacgcctggtaggatacttgctcttgccagggataaggatctctccttgaagaat 778 Query: 243 gtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcga 302 |||||||| ||||||||||||||||||||||| ||||| || |||||||||||||| || Sbjct: 779 gtgaggcacttcattcttgatgaatgtgacaaaatgctggaatcacttgacatgcggaga 838 Query: 303 gatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagca 362 ||||| |||||||||||||| ||||| || |||||||| ||||| ||||||||||||||| Sbjct: 839 gatgttcaggagatcttcaaaatgactcctcatgataagcaagtcatgatgttttcagca 898 Query: 363 acactcagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaaatt 422 || |||||||||||||| || || || ||||||||||||||||||||||| |||||||| Sbjct: 899 acgctcagcaaggagatccgtcctgtatgcaagaaatttatgcaagatccgatggaaata 958 Query: 423 tatgttgatgacgaggctaaactgacccttcatggtctagttcagcactatattaaacta 482 ||||||||||| ||||| || ||||||| |||||||| || ||||||||||| ||||| Sbjct: 959 tatgttgatgatgaggcaaagttgaccctccatggtcttgtacagcactatataaaactt 1018 Query: 483 agtgaggcggagaagaatcgaaaattgaatgatctcttagatgcgctcgacttcaaccaa 542 || ||||| |||||||| || ||| ||||||||||||| || || || || ||||||||| Sbjct: 1019 agcgaggcagagaagaaccggaaactgaatgatctcttggacgctcttgatttcaaccaa 1078 Query: 543 attgtgatatttgttaaaagtgttggtagggcttcagaacttaacaggctgctctgtgaa 602 |||||||||| || || |||||| | || ||| | ||||| || | | | || |||||| Sbjct: 1079 gttgtgatattcgtgaagagtgttagcagagctgccgaactgaataagttactttgtgaa 1138 Query: 603 tgcaattttcctgcaatctgcatacattctggaatgac 640 ||||| || || |||||||||| |||||||||||||| Sbjct: 1139 tgcaacttcccatcaatctgcattcattctggaatgac 1176
>gb|BT019131.1| Zea mays clone Contig764.F mRNA sequence Length = 967 Score = 301 bits (152), Expect = 1e-78 Identities = 326/384 (84%) Strand = Plus / Plus Query: 257 tcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagat 316 ||||||||||||||||| ||||| || |||||||||||||| ||||||| |||||||| Sbjct: 1 tcttgatgaatgtgacacaatgctggaatcacttgacatgcggagagatgttcaggagat 60 Query: 317 cttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacactcagcaagga 376 |||||| ||||| || |||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 61 cttcaaaatgactcctcatgataagcaagtcatgatgttttcagcaacgctcagcaagga 120 Query: 377 gattcgcccggtttgcaagaaatttatgcaagatcccatggaaatttatgttgatgacga 436 ||| || || || ||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 121 gatccgtcctgtatgcaagaaatttatgcaagatccgatggaaatatatgttgatgatga 180 Query: 437 ggctaaactgacccttcatggtctagttcagcactatattaaactaagtgaggcggagaa 496 ||| || ||||||| |||||||| || ||||||||||| ||||| || ||||| ||||| Sbjct: 181 ggcaaagttgaccctccatggtcttgtacagcactatataaaacttagcgaggcagagaa 240 Query: 497 gaatcgaaaattgaatgatctcttagatgcgctcgacttcaaccaaattgtgatatttgt 556 ||| || ||| ||||||||||||| || || || || ||||||||| |||||||||| || Sbjct: 241 gaaccggaaactgaatgatctcttggacgctcttgatttcaaccaagttgtgatattcgt 300 Query: 557 taaaagtgttggtagggcttcagaacttaacaggctgctctgtgaatgcaattttcctgc 616 || |||||| | || ||| | ||||| || | | | || ||||||||||| || || | Sbjct: 301 gaagagtgttagcagagctgccgaactgaataagttactttgtgaatgcaacttcccatc 360 Query: 617 aatctgcatacattctggaatgac 640 ||||||||| |||||||||||||| Sbjct: 361 aatctgcattcattctggaatgac 384
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 264 bits (133), Expect = 3e-67 Identities = 207/234 (88%) Strand = Plus / Plus Query: 58 agatttgccatgaattcgagaggtttagcaagtacctgtcagaaactaaagttgctgtct 117 |||||||||||||||| |||||||||||||||||||| | || |||||||| |||| Sbjct: 20539363 agatttgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgcggtct 20539422 Query: 118 tctatggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaatgccctcaca 177 ||||||||||||||||||| ||||||||| | ||||||||||| |||||||| | Sbjct: 20539423 tctatggtggtgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcata 20539482 Query: 178 ttgtggttggcacacctggaaggatcctagctctggctagagacaaggacctttcattga 237 |||||||||| |||||||||||||| |||||||| |||||||| ||||| ||||| |||| Sbjct: 20539483 ttgtggttggaacacctggaaggatactagctctagctagagagaaggatctttccttga 20539542 Query: 238 agaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttg 291 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 20539543 agaatgtgaggcatttcattcttgatgaatgtgacaagatgctcgattcacttg 20539596 Score = 248 bits (125), Expect = 2e-62 Identities = 205/234 (87%) Strand = Plus / Plus Query: 58 agatttgccatgaattcgagaggtttagcaagtacctgtcagaaactaaagttgctgtct 117 |||||||||||||||| |||||||||||||||||||| | || ||||||||||||| Sbjct: 20569203 agatttgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgctgtct 20569262 Query: 118 tctatggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaatgccctcaca 177 |||||||||| |||||||| ||||||||| | ||||||||||| |||||||| | Sbjct: 20569263 tctatggtggcgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcata 20569322 Query: 178 ttgtggttggcacacctggaaggatcctagctctggctagagacaaggacctttcattga 237 |||||||||| |||||||||||||| || ||||| |||||||| ||||| ||||| |||| Sbjct: 20569323 ttgtggttggaacacctggaaggatacttgctctagctagagaaaaggatctttccttga 20569382 Query: 238 agaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttg 291 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 20569383 agaatgtgaggcatttcattcttgatgaatgtgacaagatgctcgattcgcttg 20569436 Score = 238 bits (120), Expect = 2e-59 Identities = 165/180 (91%) Strand = Plus / Plus Query: 465 cagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatctcttagat 524 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 20540612 cagcactatattaaactaagtgaggcggagaagaaccggaaattgaatgatctcttagat 20540671 Query: 525 gcgctcgacttcaaccaaattgtgatatttgttaaaagtgttggtagggcttcagaactt 584 || || |||||||| ||| ||||||||||||||||||||||| |||| ||| ||||||| Sbjct: 20540672 gcactggacttcaatcaagttgtgatatttgttaaaagtgttagtagagctgcagaactg 20540731 Query: 585 aacaggctgctctgtgaatgcaattttcctgcaatctgcatacattctggaatgacacag 644 |||| |||||| ||||||||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 20540732 aacaagctgctttgtgaatgcaactttcctgcgatctccatacattctggaatgacacag 20540791 Score = 230 bits (116), Expect = 5e-57 Identities = 164/180 (91%) Strand = Plus / Plus Query: 465 cagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatctcttagat 524 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 20570452 cagcactatataaaactaagtgaggcggagaagaaccggaaattgaatgatctcttagat 20570511 Query: 525 gcgctcgacttcaaccaaattgtgatatttgttaaaagtgttggtagggcttcagaactt 584 || || |||||||| ||| ||||||||||||||||||||||| |||| ||| ||||||| Sbjct: 20570512 gcacttgacttcaatcaagttgtgatatttgttaaaagtgttagtagagctgcagaactg 20570571 Query: 585 aacaggctgctctgtgaatgcaattttcctgcaatctgcatacattctggaatgacacag 644 |||| |||||| ||||||||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 20570572 aacaagctgctttgtgaatgcaactttcctgcgatctccatacattctggaatgacacag 20570631 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 291 gacatgcgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatg 350 ||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 20539742 gacatgcgtagagatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatg 20539801 Query: 351 atgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagat 410 ||||||||||| || || ||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 20539802 atgttttcagcgacccttagcaaggagatccgcccagtttgcaagaaattcatgcaagat 20539861 Score = 153 bits (77), Expect = 8e-34 Identities = 107/117 (91%) Strand = Plus / Plus Query: 294 atgcgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatg 353 |||||| ||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 20569585 atgcgtagagatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatgatg 20569644 Query: 354 ttttcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagat 410 |||||||| || || ||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 20569645 ttttcagcgacccttagcaaggagatccgcccagtttgcaagaaattcatgcaagat 20569701 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 414 atggaaatttatgttgatgacgaggctaaactgacccttcatggtctagttcag 467 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 20540483 atggaaatttatgttgatgatgaggctaaactgacccttcatgggctagttcag 20540536 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 414 atggaaatttatgttgatgacgaggctaaactgacccttcatggtctagttcag 467 |||||||||||||||||||| |||||||||||||||||||| || || |||||| Sbjct: 20570324 atggaaatttatgttgatgatgaggctaaactgacccttcacgggcttgttcag 20570377 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 tgtccaggagatcttcaagatgac 328 ||||||||||| |||||||||||| Sbjct: 36221855 tgtccaggagagcttcaagatgac 36221832 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 gttgctggtcaagtagctgcacttgtgttatg 34 |||||||||||||| | |||||||||| |||| Sbjct: 20569067 gttgctggtcaagttggtgcacttgtgctatg 20569098 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 gttgctggtcaagtagctgcacttgtgttatg 34 |||||||||||||| | |||||||||| |||| Sbjct: 20539227 gttgctggtcaagttggtgcacttgtgctatg 20539258
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 264 bits (133), Expect = 3e-67 Identities = 207/234 (88%) Strand = Plus / Plus Query: 58 agatttgccatgaattcgagaggtttagcaagtacctgtcagaaactaaagttgctgtct 117 |||||||||||||||| |||||||||||||||||||| | || |||||||| |||| Sbjct: 1339 agatttgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgcggtct 1398 Query: 118 tctatggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaatgccctcaca 177 ||||||||||||||||||| ||||||||| | ||||||||||| |||||||| | Sbjct: 1399 tctatggtggtgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcata 1458 Query: 178 ttgtggttggcacacctggaaggatcctagctctggctagagacaaggacctttcattga 237 |||||||||| |||||||||||||| |||||||| |||||||| ||||| ||||| |||| Sbjct: 1459 ttgtggttggaacacctggaaggatactagctctagctagagagaaggatctttccttga 1518 Query: 238 agaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttg 291 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1519 agaatgtgaggcatttcattcttgatgaatgtgacaagatgctcgattcacttg 1572 Score = 248 bits (125), Expect = 2e-62 Identities = 205/234 (87%) Strand = Plus / Plus Query: 58 agatttgccatgaattcgagaggtttagcaagtacctgtcagaaactaaagttgctgtct 117 |||||||||||||||| |||||||||||||||||||| | || ||||||||||||| Sbjct: 31179 agatttgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgctgtct 31238 Query: 118 tctatggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaatgccctcaca 177 |||||||||| |||||||| ||||||||| | ||||||||||| |||||||| | Sbjct: 31239 tctatggtggcgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcata 31298 Query: 178 ttgtggttggcacacctggaaggatcctagctctggctagagacaaggacctttcattga 237 |||||||||| |||||||||||||| || ||||| |||||||| ||||| ||||| |||| Sbjct: 31299 ttgtggttggaacacctggaaggatacttgctctagctagagaaaaggatctttccttga 31358 Query: 238 agaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttg 291 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 31359 agaatgtgaggcatttcattcttgatgaatgtgacaagatgctcgattcgcttg 31412 Score = 238 bits (120), Expect = 2e-59 Identities = 165/180 (91%) Strand = Plus / Plus Query: 465 cagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatctcttagat 524 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 2588 cagcactatattaaactaagtgaggcggagaagaaccggaaattgaatgatctcttagat 2647 Query: 525 gcgctcgacttcaaccaaattgtgatatttgttaaaagtgttggtagggcttcagaactt 584 || || |||||||| ||| ||||||||||||||||||||||| |||| ||| ||||||| Sbjct: 2648 gcactggacttcaatcaagttgtgatatttgttaaaagtgttagtagagctgcagaactg 2707 Query: 585 aacaggctgctctgtgaatgcaattttcctgcaatctgcatacattctggaatgacacag 644 |||| |||||| ||||||||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 2708 aacaagctgctttgtgaatgcaactttcctgcgatctccatacattctggaatgacacag 2767 Score = 230 bits (116), Expect = 5e-57 Identities = 164/180 (91%) Strand = Plus / Plus Query: 465 cagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatctcttagat 524 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 32428 cagcactatataaaactaagtgaggcggagaagaaccggaaattgaatgatctcttagat 32487 Query: 525 gcgctcgacttcaaccaaattgtgatatttgttaaaagtgttggtagggcttcagaactt 584 || || |||||||| ||| ||||||||||||||||||||||| |||| ||| ||||||| Sbjct: 32488 gcacttgacttcaatcaagttgtgatatttgttaaaagtgttagtagagctgcagaactg 32547 Query: 585 aacaggctgctctgtgaatgcaattttcctgcaatctgcatacattctggaatgacacag 644 |||| |||||| ||||||||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 32548 aacaagctgctttgtgaatgcaactttcctgcgatctccatacattctggaatgacacag 32607 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 291 gacatgcgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatg 350 ||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1718 gacatgcgtagagatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatg 1777 Query: 351 atgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagat 410 ||||||||||| || || ||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 1778 atgttttcagcgacccttagcaaggagatccgcccagtttgcaagaaattcatgcaagat 1837 Score = 153 bits (77), Expect = 8e-34 Identities = 107/117 (91%) Strand = Plus / Plus Query: 294 atgcgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatg 353 |||||| ||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 31561 atgcgtagagatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatgatg 31620 Query: 354 ttttcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagat 410 |||||||| || || ||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 31621 ttttcagcgacccttagcaaggagatccgcccagtttgcaagaaattcatgcaagat 31677 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 414 atggaaatttatgttgatgacgaggctaaactgacccttcatggtctagttcag 467 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 2459 atggaaatttatgttgatgatgaggctaaactgacccttcatgggctagttcag 2512 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 414 atggaaatttatgttgatgacgaggctaaactgacccttcatggtctagttcag 467 |||||||||||||||||||| |||||||||||||||||||| || || |||||| Sbjct: 32300 atggaaatttatgttgatgatgaggctaaactgacccttcacgggcttgttcag 32353 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 gttgctggtcaagtagctgcacttgtgttatg 34 |||||||||||||| | |||||||||| |||| Sbjct: 31043 gttgctggtcaagttggtgcacttgtgctatg 31074 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 gttgctggtcaagtagctgcacttgtgttatg 34 |||||||||||||| | |||||||||| |||| Sbjct: 1203 gttgctggtcaagttggtgcacttgtgctatg 1234
>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1156H12 Length = 159509 Score = 264 bits (133), Expect = 3e-67 Identities = 207/234 (88%) Strand = Plus / Plus Query: 58 agatttgccatgaattcgagaggtttagcaagtacctgtcagaaactaaagttgctgtct 117 |||||||||||||||| |||||||||||||||||||| | || |||||||| |||| Sbjct: 63185 agatttgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgcggtct 63244 Query: 118 tctatggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaatgccctcaca 177 ||||||||||||||||||| ||||||||| | ||||||||||| |||||||| | Sbjct: 63245 tctatggtggtgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcata 63304 Query: 178 ttgtggttggcacacctggaaggatcctagctctggctagagacaaggacctttcattga 237 |||||||||| |||||||||||||| |||||||| |||||||| ||||| ||||| |||| Sbjct: 63305 ttgtggttggaacacctggaaggatactagctctagctagagagaaggatctttccttga 63364 Query: 238 agaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttg 291 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 63365 agaatgtgaggcatttcattcttgatgaatgtgacaagatgctcgattcacttg 63418 Score = 248 bits (125), Expect = 2e-62 Identities = 205/234 (87%) Strand = Plus / Plus Query: 58 agatttgccatgaattcgagaggtttagcaagtacctgtcagaaactaaagttgctgtct 117 |||||||||||||||| |||||||||||||||||||| | || ||||||||||||| Sbjct: 93025 agatttgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgctgtct 93084 Query: 118 tctatggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaatgccctcaca 177 |||||||||| |||||||| ||||||||| | ||||||||||| |||||||| | Sbjct: 93085 tctatggtggcgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcata 93144 Query: 178 ttgtggttggcacacctggaaggatcctagctctggctagagacaaggacctttcattga 237 |||||||||| |||||||||||||| || ||||| |||||||| ||||| ||||| |||| Sbjct: 93145 ttgtggttggaacacctggaaggatacttgctctagctagagaaaaggatctttccttga 93204 Query: 238 agaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttg 291 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 93205 agaatgtgaggcatttcattcttgatgaatgtgacaagatgctcgattcgcttg 93258 Score = 238 bits (120), Expect = 2e-59 Identities = 165/180 (91%) Strand = Plus / Plus Query: 465 cagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatctcttagat 524 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 64434 cagcactatattaaactaagtgaggcggagaagaaccggaaattgaatgatctcttagat 64493 Query: 525 gcgctcgacttcaaccaaattgtgatatttgttaaaagtgttggtagggcttcagaactt 584 || || |||||||| ||| ||||||||||||||||||||||| |||| ||| ||||||| Sbjct: 64494 gcactggacttcaatcaagttgtgatatttgttaaaagtgttagtagagctgcagaactg 64553 Query: 585 aacaggctgctctgtgaatgcaattttcctgcaatctgcatacattctggaatgacacag 644 |||| |||||| ||||||||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 64554 aacaagctgctttgtgaatgcaactttcctgcgatctccatacattctggaatgacacag 64613 Score = 230 bits (116), Expect = 5e-57 Identities = 164/180 (91%) Strand = Plus / Plus Query: 465 cagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatctcttagat 524 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 94274 cagcactatataaaactaagtgaggcggagaagaaccggaaattgaatgatctcttagat 94333 Query: 525 gcgctcgacttcaaccaaattgtgatatttgttaaaagtgttggtagggcttcagaactt 584 || || |||||||| ||| ||||||||||||||||||||||| |||| ||| ||||||| Sbjct: 94334 gcacttgacttcaatcaagttgtgatatttgttaaaagtgttagtagagctgcagaactg 94393 Query: 585 aacaggctgctctgtgaatgcaattttcctgcaatctgcatacattctggaatgacacag 644 |||| |||||| ||||||||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 94394 aacaagctgctttgtgaatgcaactttcctgcgatctccatacattctggaatgacacag 94453 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 291 gacatgcgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatg 350 ||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 63564 gacatgcgtagagatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatg 63623 Query: 351 atgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagat 410 ||||||||||| || || ||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 63624 atgttttcagcgacccttagcaaggagatccgcccagtttgcaagaaattcatgcaagat 63683 Score = 153 bits (77), Expect = 8e-34 Identities = 107/117 (91%) Strand = Plus / Plus Query: 294 atgcgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatg 353 |||||| ||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 93407 atgcgtagagatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatgatg 93466 Query: 354 ttttcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagat 410 |||||||| || || ||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 93467 ttttcagcgacccttagcaaggagatccgcccagtttgcaagaaattcatgcaagat 93523 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 414 atggaaatttatgttgatgacgaggctaaactgacccttcatggtctagttcag 467 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 64305 atggaaatttatgttgatgatgaggctaaactgacccttcatgggctagttcag 64358 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 414 atggaaatttatgttgatgacgaggctaaactgacccttcatggtctagttcag 467 |||||||||||||||||||| |||||||||||||||||||| || || |||||| Sbjct: 94146 atggaaatttatgttgatgatgaggctaaactgacccttcacgggcttgttcag 94199 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 gttgctggtcaagtagctgcacttgtgttatg 34 |||||||||||||| | |||||||||| |||| Sbjct: 92889 gttgctggtcaagttggtgcacttgtgctatg 92920 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 3 gttgctggtcaagtagctgcacttgtgttatg 34 |||||||||||||| | |||||||||| |||| Sbjct: 63049 gttgctggtcaagttggtgcacttgtgctatg 63080
>gb|BT001052.1| Arabidopsis thaliana At5g11170/F2I11_60 mRNA, complete cds Length = 1284 Score = 238 bits (120), Expect = 2e-59 Identities = 330/400 (82%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctggaaggatcctagctctggcta 216 ||||||||||||| ||||||||||| ||||| || ||||| || | || || || || | Sbjct: 485 tgaagaatgaatgtcctcacattgttgttggtacccctggtcgggtgcttgcacttgcca 544 Query: 217 gagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaaga 276 | || || || || || |||||||||||||||||||| ||||||||||||||||| || | Sbjct: 545 gggagaaagatctctctttgaagaatgtgaggcattttattcttgatgaatgtgataaaa 604 Query: 277 tgcttgattcacttgacatgcgtcgagatgtccaggagatcttcaagatgacaccccatg 336 |||| || |||||||||||||| | ||||| |||||||| ||||||||||| || |||| Sbjct: 605 tgctcgagtcacttgacatgcgaagggatgtgcaggagattttcaagatgactcctcatg 664 Query: 337 ataaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaaga 396 | |||||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||| | Sbjct: 665 acaaacaagtaatgatgttctcagcaacgctcagcaaagagatacgcccagtctgcaaaa 724 Query: 397 aatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacccttcatg 456 |||||||||||||||| |||||||| ||||| ||||| || || || |||| ||||||| Sbjct: 725 aatttatgcaagatccaatggaaatatatgtcgatgatgaagccaagttgactcttcatg 784 Query: 457 gtctagttcagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatc 516 | || || ||||||||||| ||||| || ||| |||||| || || || |||||||| | Sbjct: 785 ggcttgtccagcactatatcaaactgagcgagatggagaaaaaccggaagttgaatgacc 844 Query: 517 tcttagatgcgctcgacttcaaccaaattgtgatatttgt 556 | | |||||| | |||||||| ||| |||| || ||||| Sbjct: 845 ttcttgatgcgttggacttcaatcaagttgtcatttttgt 884
>gb|AY052303.1| Arabidopsis thaliana AT5g11170/F2I11_60 mRNA, complete cds Length = 1693 Score = 238 bits (120), Expect = 2e-59 Identities = 330/400 (82%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctggaaggatcctagctctggcta 216 ||||||||||||| ||||||||||| ||||| || ||||| || | || || || || | Sbjct: 580 tgaagaatgaatgtcctcacattgttgttggtacccctggtcgggtgcttgcacttgcca 639 Query: 217 gagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaaga 276 | || || || || || |||||||||||||||||||| ||||||||||||||||| || | Sbjct: 640 gggagaaagatctctctttgaagaatgtgaggcattttattcttgatgaatgtgataaaa 699 Query: 277 tgcttgattcacttgacatgcgtcgagatgtccaggagatcttcaagatgacaccccatg 336 |||| || |||||||||||||| | ||||| |||||||| ||||||||||| || |||| Sbjct: 700 tgctcgagtcacttgacatgcgaagggatgtgcaggagattttcaagatgactcctcatg 759 Query: 337 ataaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaaga 396 | |||||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||| | Sbjct: 760 acaaacaagtaatgatgttctcagcaacgctcagcaaagagatacgcccagtctgcaaaa 819 Query: 397 aatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacccttcatg 456 |||||||||||||||| |||||||| ||||| ||||| || || || |||| ||||||| Sbjct: 820 aatttatgcaagatccaatggaaatatatgtcgatgatgaagccaagttgactcttcatg 879 Query: 457 gtctagttcagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatc 516 | || || ||||||||||| ||||| || ||| |||||| || || || |||||||| | Sbjct: 880 ggcttgtccagcactatatcaaactgagcgagatggagaaaaaccggaagttgaatgacc 939 Query: 517 tcttagatgcgctcgacttcaaccaaattgtgatatttgt 556 | | |||||| | |||||||| ||| |||| || ||||| Sbjct: 940 ttcttgatgcgttggacttcaatcaagttgtcatttttgt 979
>ref|NM_180476.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT5G11170 transcript variant AT5G11170.2 mRNA, complete cds Length = 1438 Score = 232 bits (117), Expect = 1e-57 Identities = 273/325 (84%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctggaaggatcctagctctggcta 216 ||||||||||||| ||||||||||| ||||| || ||||| || | || || || || | Sbjct: 325 tgaagaatgaatgtcctcacattgttgttggtacccctggtcgggtgcttgcacttgcca 384 Query: 217 gagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaaga 276 | || || || || || |||||||||||||||||||| ||||||||||||||||| || | Sbjct: 385 gggagaaagatctctctttgaagaatgtgaggcattttattcttgatgaatgtgataaaa 444 Query: 277 tgcttgattcacttgacatgcgtcgagatgtccaggagatcttcaagatgacaccccatg 336 |||| || |||||||||||||| | ||||| |||||||| ||||||||||| || |||| Sbjct: 445 tgctcgagtcacttgacatgcgaagggatgtgcaggagattttcaagatgactcctcatg 504 Query: 337 ataaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaaga 396 | |||||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||| | Sbjct: 505 acaaacaagtaatgatgttctcagcaacgctcagcaaagagatacgcccagtctgcaaaa 564 Query: 397 aatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacccttcatg 456 |||||||||||||||| |||||||| ||||| ||||| || || || |||| ||||||| Sbjct: 565 aatttatgcaagatccaatggaaatatatgtcgatgatgaagccaagttgactcttcatg 624 Query: 457 gtctagttcagcactatattaaact 481 | || || ||||||||||| ||||| Sbjct: 625 ggcttgtccagcactatatcaaact 649
>ref|NM_121155.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT5G11170 transcript variant AT5G11170.1 mRNA, complete cds Length = 1693 Score = 232 bits (117), Expect = 1e-57 Identities = 273/325 (84%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctggaaggatcctagctctggcta 216 ||||||||||||| ||||||||||| ||||| || ||||| || | || || || || | Sbjct: 580 tgaagaatgaatgtcctcacattgttgttggtacccctggtcgggtgcttgcacttgcca 639 Query: 217 gagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaaga 276 | || || || || || |||||||||||||||||||| ||||||||||||||||| || | Sbjct: 640 gggagaaagatctctctttgaagaatgtgaggcattttattcttgatgaatgtgataaaa 699 Query: 277 tgcttgattcacttgacatgcgtcgagatgtccaggagatcttcaagatgacaccccatg 336 |||| || |||||||||||||| | ||||| |||||||| ||||||||||| || |||| Sbjct: 700 tgctcgagtcacttgacatgcgaagggatgtgcaggagattttcaagatgactcctcatg 759 Query: 337 ataaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaaga 396 | |||||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||| | Sbjct: 760 acaaacaagtaatgatgttctcagcaacgctcagcaaagagatacgcccagtctgcaaaa 819 Query: 397 aatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacccttcatg 456 |||||||||||||||| |||||||| ||||| ||||| || || || |||| ||||||| Sbjct: 820 aatttatgcaagatccaatggaaatatatgtcgatgatgaagccaagttgactcttcatg 879 Query: 457 gtctagttcagcactatattaaact 481 | || || ||||||||||| ||||| Sbjct: 880 ggcttgtccagcactatatcaaact 904
>ref|NM_121158.2| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT5G11200 mRNA, complete cds Length = 1659 Score = 230 bits (116), Expect = 5e-57 Identities = 329/400 (82%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctggaaggatcctagctctggcta 216 ||||||||||||| ||||||||||| ||||| || ||||| | | || || || || | Sbjct: 583 tgaagaatgaatgtcctcacattgttgttggtacccctggtcgagtgcttgcacttgcca 642 Query: 217 gagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaaga 276 | || || || || || |||||||||||||||||||| ||||||||||| ||||| || | Sbjct: 643 gggagaaagatctctctttgaagaatgtgaggcattttattcttgatgagtgtgataaaa 702 Query: 277 tgcttgattcacttgacatgcgtcgagatgtccaggagatcttcaagatgacaccccatg 336 |||| || |||||||||||||| | ||||| |||||||| ||||||||||| || |||| Sbjct: 703 tgctcgagtcacttgacatgcgaagggatgtgcaggagattttcaagatgactcctcatg 762 Query: 337 ataaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaaga 396 | |||||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||||| Sbjct: 763 acaaacaagtaatgatgttctcagcaacgctcagcaaagagatacgcccagtctgcaaga 822 Query: 397 aatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacccttcatg 456 | |||||||||||||| |||||||| ||||||||||| || || || |||| ||||||| Sbjct: 823 agtttatgcaagatccaatggaaatatatgttgatgatgaagccaagttgactcttcatg 882 Query: 457 gtctagttcagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatc 516 | || || |||||||| || ||||| || ||| |||||| ||||| || |||||||| | Sbjct: 883 gacttgtccagcactacatcaaactgagcgagatggagaaaaatcgcaagttgaatgacc 942 Query: 517 tcttagatgcgctcgacttcaaccaaattgtgatatttgt 556 | | |||||| | |||||||| ||| |||| || ||||| Sbjct: 943 ttcttgatgcgttggacttcaatcaagttgtcatttttgt 982
>emb|AJ010466.1|ATH010466 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH15 Length = 1635 Score = 230 bits (116), Expect = 5e-57 Identities = 329/400 (82%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctggaaggatcctagctctggcta 216 ||||||||||||| ||||||||||| ||||| || ||||| || | || || || || | Sbjct: 559 tgaagaatgaatgtcctcacattgttgttggtacccctggtcgggtgcttgcacttgcca 618 Query: 217 gagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaaga 276 | || || || || || |||||||||||||||||||| ||||||||||||||||| || | Sbjct: 619 gggagaaagatctctctttgaagaatgtgaggcattttattcttgatgaatgtgataaaa 678 Query: 277 tgcttgattcacttgacatgcgtcgagatgtccaggagatcttcaagatgacaccccatg 336 |||| || |||||||||||||| | ||||| |||||||| ||||||||||| || |||| Sbjct: 679 tgctcgagtcacttgacatgcgaagggatgtgcaggagattttcaagatgactcctcatg 738 Query: 337 ataaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaaga 396 | |||||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||| | Sbjct: 739 acaaacaagtaatgatgttctcagcaacgctcagcaaagagatacgcccagtctgcaaaa 798 Query: 397 aatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacccttcatg 456 |||||||||||||||| |||||||| ||||| ||||| || || || |||| ||||||| Sbjct: 799 aatttatgcaagatccaatggaaatatatgtcgatgatgaagccaagttgactcttcatg 858 Query: 457 gtctagttcagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatc 516 | || || |||||||| || ||||| || ||| |||||| || || || |||||||| | Sbjct: 859 ggcttgtccagcactacatcaaactgagcgagatggagaaaaaccggaagttgaatgacc 918 Query: 517 tcttagatgcgctcgacttcaaccaaattgtgatatttgt 556 | | |||||| | |||||||| ||| |||| || ||||| Sbjct: 919 ttcttgatgcgttggacttcaatcaagttgtcatttttgt 958
>gb|AY059168.1| Arabidopsis thaliana AT5g11200/F2I11_90 mRNA, complete cds Length = 1284 Score = 230 bits (116), Expect = 5e-57 Identities = 329/400 (82%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctggaaggatcctagctctggcta 216 ||||||||||||| ||||||||||| ||||| || ||||| | | || || || || | Sbjct: 485 tgaagaatgaatgtcctcacattgttgttggtacccctggtcgagtgcttgcacttgcca 544 Query: 217 gagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaaga 276 | || || || || || |||||||||||||||||||| ||||||||||| ||||| || | Sbjct: 545 gggagaaagatctctctttgaagaatgtgaggcattttattcttgatgagtgtgataaaa 604 Query: 277 tgcttgattcacttgacatgcgtcgagatgtccaggagatcttcaagatgacaccccatg 336 |||| || |||||||||||||| | ||||| |||||||| ||||||||||| || |||| Sbjct: 605 tgctcgagtcacttgacatgcgaagggatgtgcaggagattttcaagatgactcctcatg 664 Query: 337 ataaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaaga 396 | |||||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||||| Sbjct: 665 acaaacaagtaatgatgttctcagcaacgctcagcaaagagatacgcccagtctgcaaga 724 Query: 397 aatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacccttcatg 456 | |||||||||||||| |||||||| ||||||||||| || || || |||| ||||||| Sbjct: 725 agtttatgcaagatccaatggaaatatatgttgatgatgaagccaagttgactcttcatg 784 Query: 457 gtctagttcagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatc 516 | || || |||||||| || ||||| || ||| |||||| ||||| || |||||||| | Sbjct: 785 gacttgtccagcactacatcaaactgagcgagatggagaaaaatcgcaagttgaatgacc 844 Query: 517 tcttagatgcgctcgacttcaaccaaattgtgatatttgt 556 | | |||||| | |||||||| ||| |||| || ||||| Sbjct: 845 ttcttgatgcgttggacttcaatcaagttgtcatttttgt 884
>gb|AF378868.1|AF378868 Arabidopsis thaliana AT5g11200/F2I11_90 mRNA, complete cds Length = 1654 Score = 230 bits (116), Expect = 5e-57 Identities = 329/400 (82%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctggaaggatcctagctctggcta 216 ||||||||||||| ||||||||||| ||||| || ||||| | | || || || || | Sbjct: 582 tgaagaatgaatgtcctcacattgttgttggtacccctggtcgagtgcttgcacttgcca 641 Query: 217 gagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaaga 276 | || || || || || |||||||||||||||||||| ||||||||||| ||||| || | Sbjct: 642 gggagaaagatctctctttgaagaatgtgaggcattttattcttgatgagtgtgataaaa 701 Query: 277 tgcttgattcacttgacatgcgtcgagatgtccaggagatcttcaagatgacaccccatg 336 |||| || |||||||||||||| | ||||| |||||||| ||||||||||| || |||| Sbjct: 702 tgctcgagtcacttgacatgcgaagggatgtgcaggagattttcaagatgactcctcatg 761 Query: 337 ataaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaaga 396 | |||||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||||| Sbjct: 762 acaaacaagtaatgatgttctcagcaacgctcagcaaagagatacgcccagtctgcaaga 821 Query: 397 aatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacccttcatg 456 | |||||||||||||| |||||||| ||||||||||| || || || |||| ||||||| Sbjct: 822 agtttatgcaagatccaatggaaatatatgttgatgatgaagccaagttgactcttcatg 881 Query: 457 gtctagttcagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatc 516 | || || |||||||| || ||||| || ||| |||||| ||||| || |||||||| | Sbjct: 882 gacttgtccagcactacatcaaactgagcgagatggagaaaaatcgcaagttgaatgacc 941 Query: 517 tcttagatgcgctcgacttcaaccaaattgtgatatttgt 556 | | |||||| | |||||||| ||| |||| || ||||| Sbjct: 942 ttcttgatgcgttggacttcaatcaagttgtcatttttgt 981
>emb|BX831239.1|CNS09YQC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZE11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1723 Score = 230 bits (116), Expect = 5e-57 Identities = 329/400 (82%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctggaaggatcctagctctggcta 216 ||||||||||||| ||||||||||| ||||| || ||||| | | || || || || | Sbjct: 691 tgaagaatgaatgtcctcacattgttgttggtacccctggtcgagtgcttgcacttgcca 750 Query: 217 gagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaaga 276 | || || || || || |||||||||||||||||||| ||||||||||| ||||| || | Sbjct: 751 gggagaaagatctctctttgaagaatgtgaggcattttattcttgatgagtgtgataaaa 810 Query: 277 tgcttgattcacttgacatgcgtcgagatgtccaggagatcttcaagatgacaccccatg 336 |||| || |||||||||||||| | ||||| |||||||| ||||||||||| || |||| Sbjct: 811 tgctcgagtcacttgacatgcgaagggatgtgcaggagattttcaagatgactcctcatg 870 Query: 337 ataaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaaga 396 | |||||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||||| Sbjct: 871 acaaacaagtaatgatgttctcagcaacgctcagcaaagagatacgcccagtctgcaaga 930 Query: 397 aatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacccttcatg 456 | |||||||||||||| |||||||| ||||||||||| || || || |||| ||||||| Sbjct: 931 agtttatgcaagatccaatggaaatatatgttgatgatgaagccaagttgactcttcatg 990 Query: 457 gtctagttcagcactatattaaactaagtgaggcggagaagaatcgaaaattgaatgatc 516 | || || |||||||| || ||||| || ||| |||||| ||||| || |||||||| | Sbjct: 991 gacttgtccagcactacatcaaactgagcgagatggagaaaaatcgcaagttgaatgacc 1050 Query: 517 tcttagatgcgctcgacttcaaccaaattgtgatatttgt 556 | | |||||| | |||||||| ||| |||| || ||||| Sbjct: 1051 ttcttgatgcgttggacttcaatcaagttgtcatttttgt 1090
>emb|BX830512.1|CNS0A08M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB88ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1555 Score = 220 bits (111), Expect = 4e-54 Identities = 270/323 (83%) Strand = Plus / Plus Query: 234 ttgaagaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgac 293 |||||||||||||||||||| ||||||||||| ||||| || ||||| || ||||||||| Sbjct: 621 ttgaagaatgtgaggcattttattcttgatgagtgtgataaaatgctcgagtcacttgac 680 Query: 294 atgcgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatg 353 ||||| | ||||| |||||||| ||||||||||| || ||||| |||||||| |||||| Sbjct: 681 atgcgaagggatgtgcaggagattttcaagatgactcctcatgacaaacaagtaatgatg 740 Query: 354 ttttcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagatccc 413 || |||||||| |||||||| ||||| ||||| || |||||||| |||||||||||||| Sbjct: 741 ttctcagcaacgctcagcaaagagatacgcccagtctgcaagaagtttatgcaagatcca 800 Query: 414 atggaaatttatgttgatgacgaggctaaactgacccttcatggtctagttcagcactat 473 ||||| || ||||||||||| || || || |||| |||||||| || || |||||||| Sbjct: 801 atggacatatatgttgatgatgaagccaagttgactcttcatgggcttgtccagcactac 860 Query: 474 attaaactaagtgaggcggagaagaatcgaaaattgaatgatctcttagatgcgctcgac 533 || ||||| || ||| |||||| ||||| || |||||||| || | |||||| | ||| Sbjct: 861 atcaaactgagcgagatggagaaaaatcgcaagttgaatgaccttcttgatgcgttggac 920 Query: 534 ttcaaccaaattgtgatatttgt 556 ||||| ||| |||| || ||||| Sbjct: 921 ttcaatcaagttgtcatttttgt 943 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctgg 196 ||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 544 tgaagaatgaatgtcctcacattgttgttggtacccctgg 583
>dbj|AK221708.1| Arabidopsis thaliana mRNA for DEAD BOX RNA helicase RH15 - like protein, complete cds, clone: RAFL16-54-J17 Length = 1641 Score = 194 bits (98), Expect = 2e-46 Identities = 215/254 (84%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctggaaggatcctagctctggcta 216 ||||||||||||| ||||||||||| ||||| || ||||| || | || || || || | Sbjct: 711 tgaagaatgaatgtcctcacattgttgttggtacccctggtcgggtgcttgcacttgcca 770 Query: 217 gagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaaga 276 | || || || || || |||||||||||||||||||| ||||||||||||||||| || | Sbjct: 771 gggagaaagatctctctttgaagaatgtgaggcattttattcttgatgaatgtgataaaa 830 Query: 277 tgcttgattcacttgacatgcgtcgagatgtccaggagatcttcaagatgacaccccatg 336 |||| || |||||||||||||| | ||||| |||||||| ||||||||||| || |||| Sbjct: 831 tgctcgagtcacttgacatgcgaagggatgtgcaggagattttcaagatgactcctcatg 890 Query: 337 ataaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaaga 396 | |||||||| |||||||| |||||||| |||||||| ||||| ||||| || ||||| | Sbjct: 891 acaaacaagtaatgatgttctcagcaacgctcagcaaagagatacgcccagtctgcaaaa 950 Query: 397 aatttatgcaagat 410 |||||||||||||| Sbjct: 951 aatttatgcaagat 964
>dbj|AK058505.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F12, full insert sequence Length = 564 Score = 184 bits (93), Expect = 2e-43 Identities = 126/137 (91%) Strand = Plus / Plus Query: 414 atggaaatttatgttgatgacgaggctaaactgacccttcatggtctagttcagcactat 473 |||||||||||||||||||| |||||||||||||||||||| || || |||||||||||| Sbjct: 428 atggaaatttatgttgatgatgaggctaaactgacccttcacgggcttgttcagcactat 487 Query: 474 attaaactaagtgaggcggagaagaatcgaaaattgaatgatctcttagatgcgctcgac 533 || ||||||||||||||||||||||| || ||||||||||||||||||||||| || ||| Sbjct: 488 ataaaactaagtgaggcggagaagaaccggaaattgaatgatctcttagatgcacttgac 547 Query: 534 ttcaaccaaattgtgat 550 ||||| ||| ||||||| Sbjct: 548 ttcaatcaagttgtgat 564
>gb|AY107107.1| Zea mays PCO088497 mRNA sequence Length = 818 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 492 gagaagaatcgaaaattgaatgatctcttagatgcgctcgacttcaaccaaattgtgata 551 |||||||| ||||| ||||| ||||| |||||||| ||||||||||||||| |||||||| Sbjct: 10 gagaagaaccgaaagttgaacgatcttttagatgcactcgacttcaaccaagttgtgata 69 Query: 552 tttgttaaaagtgttggtagggcttcagaacttaacaggctgctctgtgaatgcaatttt 611 ||||||||||||||| |||| ||| ||||||| |||| ||||||| || |||||||| Sbjct: 70 tttgttaaaagtgttagtagagctgcagaactcaacaaattgctctgcgagtgcaatttc 129 Query: 612 cctgcaatctgcatacattctggaatgacacag 644 || ||||||| ||||||||||||||||||||| Sbjct: 130 ccctcaatctgtatacattctggaatgacacag 162
>gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete sequence Length = 115348 Score = 145 bits (73), Expect = 2e-31 Identities = 153/182 (84%) Strand = Plus / Minus Query: 108 gttgctgtcttctatggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaa 167 ||||||||||| ||||||||||| |||| ||||||||| | ||||| |||||| Sbjct: 31587 gttgctgtcttttatggtggtgtcaacattaaagttcacaaggatctgttgaaaaatgaa 31528 Query: 168 tgccctcacattgtggttggcacacctggaaggatcctagctctggctagagacaaggac 227 |||||||| ||||| ||||| ||||||||||| || ||||| |||| || || |||||| Sbjct: 31527 tgccctcatattgtcgttggtacacctggaagaatactagcattggccagggataaggac 31468 Query: 228 ctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattca 287 |||||||| |||||||| |||||||||||||| ||||||||||| |||||||| || ||| Sbjct: 31467 ctttcattaaagaatgttaggcatttcattctggatgaatgtgataagatgctggaatca 31408 Query: 288 ct 289 || Sbjct: 31407 ct 31406 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 318 ttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacactcagcaaggag 377 ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 31278 ttcaagatgacaccccatgataagcaagttatgatgttttctgcaacactcagcaaggaa 31219 Query: 378 attcgcccggtttgcaagaaatttatgcaagat 410 |||||||| || ||||| ||||||||||||||| Sbjct: 31218 attcgcccagtctgcaaaaaatttatgcaagat 31186 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 486 gaggcggagaagaatcgaaaattgaatgatctcttagatgcgctcgacttcaaccaaatt 545 |||| ||||||||| ||||| ||||| ||||| | ||||| || |||||||||||| || Sbjct: 30404 gaggaggagaagaaccgaaagttgaacgatcttcttgatgcactggacttcaaccaagtt 30345 Query: 546 gtgatatttgttaaaagtgt 565 ||||| ||||| |||||||| Sbjct: 30344 gtgatctttgtgaaaagtgt 30325 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 414 atggaaatttatgttgatgacgaggctaaactgacccttcatggtctagttcag 467 ||||||||||||||||| || || || ||| |||||||||||||||| |||||| Sbjct: 30570 atggaaatttatgttgacgatgaagcgaaattgacccttcatggtctcgttcag 30517
>gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete sequence Length = 139792 Score = 145 bits (73), Expect = 2e-31 Identities = 153/182 (84%) Strand = Plus / Plus Query: 108 gttgctgtcttctatggtggtgttcacatnnnnnnncacaaggatttattgaagaatgaa 167 ||||||||||| ||||||||||| |||| ||||||||| | ||||| |||||| Sbjct: 53508 gttgctgtcttttatggtggtgtcaacattaaagttcacaaggatctgttgaaaaatgaa 53567 Query: 168 tgccctcacattgtggttggcacacctggaaggatcctagctctggctagagacaaggac 227 |||||||| ||||| ||||| ||||||||||| || ||||| |||| || || |||||| Sbjct: 53568 tgccctcatattgtcgttggtacacctggaagaatactagcattggccagggataaggac 53627 Query: 228 ctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattca 287 |||||||| |||||||| |||||||||||||| ||||||||||| |||||||| || ||| Sbjct: 53628 ctttcattaaagaatgttaggcatttcattctggatgaatgtgataagatgctggaatca 53687 Query: 288 ct 289 || Sbjct: 53688 ct 53689 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Plus Query: 318 ttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacactcagcaaggag 377 ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 53817 ttcaagatgacaccccatgataagcaagttatgatgttttctgcaacactcagcaaggaa 53876 Query: 378 attcgcccggtttgcaagaaatttatgcaagat 410 |||||||| || ||||| ||||||||||||||| Sbjct: 53877 attcgcccagtctgcaaaaaatttatgcaagat 53909 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 486 gaggcggagaagaatcgaaaattgaatgatctcttagatgcgctcgacttcaaccaaatt 545 |||| ||||||||| ||||| ||||| ||||| | ||||| || |||||||||||| || Sbjct: 54691 gaggaggagaagaaccgaaagttgaacgatcttcttgatgcactggacttcaaccaagtt 54750 Query: 546 gtgatatttgttaaaagtgt 565 ||||| ||||| |||||||| Sbjct: 54751 gtgatctttgtgaaaagtgt 54770 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 414 atggaaatttatgttgatgacgaggctaaactgacccttcatggtctagttcag 467 ||||||||||||||||| || || || ||| |||||||||||||||| |||||| Sbjct: 54525 atggaaatttatgttgacgatgaagcgaaattgacccttcatggtctcgttcag 54578
>ref|XM_774826.1| PREDICTED: Strongylocentrotus purpuratus similar to HLA-B associated transcript 1, transcript variant 1 (LOC580001), mRNA Length = 2942 Score = 111 bits (56), Expect = 3e-21 Identities = 179/220 (81%) Strand = Plus / Plus Query: 241 atgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtc 300 |||||| ||| ||||| || || ||||||||||||||||| || || |||||| | | Sbjct: 621 atgtgaagcacttcatcctggacgaatgtgacaagatgctggaacagctagacatgagac 680 Query: 301 gagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcag 360 |||||||||||||||||||| |||||||||||||| || ||||| |||||||| | Sbjct: 681 gagatgtccaggagatcttccgcatgacaccccatgagaagcaagtcatgatgttcagtg 740 Query: 361 caacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaaa 420 | || ||||||||||| | || || || ||||||||||||||||||||||| ||||| Sbjct: 741 ctaccctcagcaaggaagtgcgacctgtctgcaagaaatttatgcaagatccgatggagg 800 Query: 421 tttatgttgatgacgaggctaaactgacccttcatggtct 460 | || |||||||| ||| |||| ||||| || |||||||| Sbjct: 801 tgtacgttgatgatgagactaagctgacactccatggtct 840
>emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BAC clone F2I11 (ESSA project) Length = 110992 Score = 111 bits (56), Expect = 3e-21 Identities = 95/108 (87%) Strand = Plus / Plus Query: 303 gatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagca 362 ||||| |||||||| ||||||||||| || ||||| |||||||| |||||||| |||||| Sbjct: 31637 gatgtgcaggagattttcaagatgactcctcatgacaaacaagtaatgatgttctcagca 31696 Query: 363 acactcagcaaggagattcgcccggtttgcaagaaatttatgcaagat 410 || |||||||| ||||| ||||| || |||||||| |||||||||||| Sbjct: 31697 acgctcagcaaagagatacgcccagtctgcaagaagtttatgcaagat 31744 Score = 111 bits (56), Expect = 3e-21 Identities = 95/108 (87%) Strand = Plus / Plus Query: 303 gatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagca 362 ||||| |||||||| ||||||||||| || ||||| |||||||| |||||||| |||||| Sbjct: 17593 gatgtgcaggagattttcaagatgactcctcatgacaaacaagtaatgatgttctcagca 17652 Query: 363 acactcagcaaggagattcgcccggtttgcaagaaatttatgcaagat 410 || |||||||| ||||| ||||| || ||||| ||||||||||||||| Sbjct: 17653 acgctcagcaaagagatacgcccagtctgcaaaaaatttatgcaagat 17700 Score = 85.7 bits (43), Expect = 2e-13 Identities = 112/135 (82%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctggaaggatcctagctctggcta 216 ||||||||||||| ||||||||||| ||||| || ||||| || | || || || || | Sbjct: 17367 tgaagaatgaatgtcctcacattgttgttggtacccctggtcgggtgcttgcacttgcca 17426 Query: 217 gagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaaga 276 | || || || || || |||||||||||||||||||| ||||||||||||||||| || | Sbjct: 17427 gggagaaagatctctctttgaagaatgtgaggcattttattcttgatgaatgtgataaaa 17486 Query: 277 tgcttgattcacttg 291 |||| || ||||||| Sbjct: 17487 tgctcgagtcacttg 17501 Score = 69.9 bits (35), Expect = 1e-08 Identities = 110/135 (81%) Strand = Plus / Plus Query: 157 tgaagaatgaatgccctcacattgtggttggcacacctggaaggatcctagctctggcta 216 ||||||||||||| ||||||||||| ||||| || ||||| | | || || || || | Sbjct: 31412 tgaagaatgaatgtcctcacattgttgttggtacccctggtcgagtgcttgcacttgcca 31471 Query: 217 gagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgtgacaaga 276 | || || || || || |||||||||||||||||||| ||||||||||| ||||| || | Sbjct: 31472 gggagaaagatctctctttgaagaatgtgaggcattttattcttgatgagtgtgataaaa 31531 Query: 277 tgcttgattcacttg 291 |||| || ||||||| Sbjct: 31532 tgctcgagtcacttg 31546
>gb|AC150787.15| Medicago truncatula clone mth2-171n13, complete sequence Length = 82665 Score = 105 bits (53), Expect = 2e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 318 ttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacactcagcaaggag 377 |||||| |||| ||||| ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 17705 ttcaagttgactccccacgataagcaagttatgatgttttcagcaacactcagcaaggaa 17764 Query: 378 attcgcccggtttgcaagaaatttatgcaagat 410 || ||||| || ||||| ||||||||||||||| Sbjct: 17765 atccgcccagtctgcaaaaaatttatgcaagat 17797 Score = 83.8 bits (42), Expect = 7e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 144 cacaaggatttattgaagaatgaatgccctcacattgtggttggcacacctggaaggatc 203 ||||||||| ||||||| ||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 17431 cacaaggatctattgaaaaatgagtgccctcaaattgttgttggaacgcctggaagaata 17490 Query: 204 ctagctctggctagagacaaggacctttcattgaagaatgtgaggcatttcattcttgat 263 ||||| ||||||| || ||| | ||||||||||||||||| | ||||| || | ||| Sbjct: 17491 ctagcattggctagggagaagaatctttcattgaagaatgttcgtcattttgttttagat 17550 Query: 264 gaatgtgacaagatgcttgattcact 289 || ||||| |||||||| || ||||| Sbjct: 17551 gagtgtgataagatgctcgaatcact 17576 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 507 ttgaatgatctcttagatgcgctcgacttcaaccaaattgtgatatttgttaaaagtgtt 566 ||||||||||| | ||||| || |||||||||||| |||| || ||||| ||||||||| Sbjct: 18603 ttgaatgatcttcttgatgccctagacttcaaccaagttgttatctttgtgaaaagtgtt 18662 Query: 567 ggtag 571 |||| Sbjct: 18663 agtag 18667 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 atggaaatttatgttgatga 433 |||||||||||||||||||| Sbjct: 18415 atggaaatttatgttgatga 18434
>ref|XM_796694.1| PREDICTED: Strongylocentrotus purpuratus similar to HLA-B associated transcript 1, transcript variant 2 (LOC580001), mRNA Length = 2975 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 291 gacatgcgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatg 350 |||||| | ||||||||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 728 gacatgagacgagatgtccaggagatcttccgcatgacaccccatgagaagcaagtcatg 787 Query: 351 atgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagat 410 ||||| || || ||||||||||| | || || || ||||||||||||||||||||| Sbjct: 788 atgttcagtgctaccctcagcaaggaagtgcgacctgtctgcaagaaatttatgcaagat 847 Query: 411 cccatggaaatttatgttgatgacgaggctaaactgacccttcatggtct 460 || ||||| | || |||||||| ||| |||| ||||| || |||||||| Sbjct: 848 ccgatggaggtgtacgttgatgatgagactaagctgacactccatggtct 897 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 241 atgtgaggcatttcattcttgatgaatgtgacaagatgct 280 |||||| ||| ||||| || || ||||||||||||||||| Sbjct: 618 atgtgaagcacttcatcctggacgaatgtgacaagatgct 657
>gb|BC061280.1| Xenopus tropicalis HLA-B-associated transcript 1A, mRNA (cDNA clone MGC:75726 IMAGE:5381000), complete cds Length = 1883 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Plus Query: 249 catttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtc 308 |||||||| |||||||| |||||||||||| | || || |||||||| ||||||| Sbjct: 677 catttcatccttgatgagtgtgacaagatgttagaacagctagacatgcgcagagatgta 736 Query: 309 caggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacactc 368 ||||| || ||| |||||||| ||||| || || || |||||||| || ||||| Sbjct: 737 caggaaattttccgcatgacaccacatgagaagcaggttatgatgttcagtgccacactg 796 Query: 369 agcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaaat 421 |||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 797 agcaaggagattcgcccggtttgccgcaaatttatgcaagatccaatggaaat 849
>ref|NM_203741.1| Xenopus tropicalis HLA-B-associated transcript 1A (bat1a), mRNA Length = 1883 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Plus Query: 249 catttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtc 308 |||||||| |||||||| |||||||||||| | || || |||||||| ||||||| Sbjct: 677 catttcatccttgatgagtgtgacaagatgttagaacagctagacatgcgcagagatgta 736 Query: 309 caggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacactc 368 ||||| || ||| |||||||| ||||| || || || |||||||| || ||||| Sbjct: 737 caggaaattttccgcatgacaccacatgagaagcaggttatgatgttcagtgccacactg 796 Query: 369 agcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaaat 421 |||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 797 agcaaggagattcgcccggtttgccgcaaatttatgcaagatccaatggaaat 849
>emb|AJ428513.1|CTE428513 Chironomus tentans mRNA for HEL protein Length = 1643 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 339 aaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaa 398 |||||||| |||||||| ||||| || | ||||| |||||||||||| ||||||||||| Sbjct: 697 aaacaagtcatgatgttctcagctactttaagcaaagagattcgcccgatttgcaagaaa 756 Query: 399 tttatgcaagatcccatggaaatttatgttga 430 || ||||||||||| |||||| |||| ||||| Sbjct: 757 ttcatgcaagatcctatggaagtttacgttga 788
>ref|NM_214478.1| Strongylocentrotus purpuratus calreticulin (calret), mRNA Length = 2033 Score = 83.8 bits (42), Expect = 7e-13 Identities = 138/170 (81%) Strand = Plus / Minus Query: 241 atgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtc 300 |||||| ||| ||||| || || ||||||||||||||||| || || |||||| | | Sbjct: 173 atgtgaagcacttcatcctggacgaatgtgacaagatgctggaacagctagacatgagac 114 Query: 301 gagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcag 360 |||||||||||||||||||| |||||||||||||| || ||||| |||||||| | Sbjct: 113 gagatgtccaggagatcttccgcatgacaccccatgagaagcaagtcatgatgttcagtg 54 Query: 361 caacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagat 410 | || || |||||||| | || || || ||||||||||||||||||||| Sbjct: 53 ctaccctaagcaaggaagtgcgacctgtctgcaagaaatttatgcaagat 4
>gb|AF177915.1|AF177915 Strongylocentrotus purpuratus calreticulin precursor (calret) mRNA, complete cds Length = 2033 Score = 83.8 bits (42), Expect = 7e-13 Identities = 138/170 (81%) Strand = Plus / Minus Query: 241 atgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtc 300 |||||| ||| ||||| || || ||||||||||||||||| || || |||||| | | Sbjct: 173 atgtgaagcacttcatcctggacgaatgtgacaagatgctggaacagctagacatgagac 114 Query: 301 gagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcag 360 |||||||||||||||||||| |||||||||||||| || ||||| |||||||| | Sbjct: 113 gagatgtccaggagatcttccgcatgacaccccatgagaagcaagtcatgatgttcagtg 54 Query: 361 caacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagat 410 | || || |||||||| | || || || ||||||||||||||||||||| Sbjct: 53 ctaccctaagcaaggaagtgcgacctgtctgcaagaaatttatgcaagat 4
>gb|BC082368.1| Xenopus laevis MGC81606 protein, mRNA (cDNA clone MGC:81606 IMAGE:6863791), complete cds Length = 1921 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 369 agcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaaat 421 |||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 855 agcaaggagattcgcccggtttgccggaaatttatgcaagatccaatggaaat 907
>gb|DQ440219.1| Aedes aegypti clone AET-2442 ATP-dependent RNA helicase mRNA, complete cds Length = 1272 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 339 aaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaa 398 ||||||||||||||||| || || || ||||| |||||||| || || || |||||||| Sbjct: 652 aaacaagtgatgatgttctccgccaccctcagtaaggagatccggcccgtgtgcaagaag 711 Query: 399 tttatgcaagatcccatggaaatttatgt 427 || ||||||||||| |||||| ||||||| Sbjct: 712 ttcatgcaagatcctatggaagtttatgt 740
>emb|X79802.1|DMWM6 D.melanogaster WM6 mRNA Length = 1578 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 339 aaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaa 398 ||||||||||||||||| || || ||| | |||||||| ||||| || |||||||| || Sbjct: 813 aaacaagtgatgatgttctctgccacattgagcaaggacattcgtcccgtttgcaaaaag 872 Query: 399 tttatgcaagatcccatgga 418 || ||||||||||||||||| Sbjct: 873 ttcatgcaagatcccatgga 892
>gb|AY118921.1| Drosophila melanogaster LD23644 full insert cDNA Length = 1569 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 339 aaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaa 398 ||||||||||||||||| || || ||| | |||||||| ||||| || |||||||| || Sbjct: 797 aaacaagtgatgatgttctctgccacattgagcaaggacattcgtcccgtttgcaaaaag 856 Query: 399 tttatgcaagatcccatgga 418 || ||||||||||||||||| Sbjct: 857 ttcatgcaagatcccatgga 876
>ref|NM_164648.1| Drosophila melanogaster Helicase at 25E CG7269-RC, transcript variant C (Hel25E), mRNA Length = 1756 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 339 aaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaa 398 ||||||||||||||||| || || ||| | |||||||| ||||| || |||||||| || Sbjct: 831 aaacaagtgatgatgttctctgccacattgagcaaggacattcgtcccgtttgcaaaaag 890 Query: 399 tttatgcaagatcccatgga 418 || ||||||||||||||||| Sbjct: 891 ttcatgcaagatcccatgga 910
>ref|NM_164647.1| Drosophila melanogaster Helicase at 25E CG7269-RB, transcript variant B (Hel25E), mRNA Length = 1657 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 339 aaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaa 398 ||||||||||||||||| || || ||| | |||||||| ||||| || |||||||| || Sbjct: 732 aaacaagtgatgatgttctctgccacattgagcaaggacattcgtcccgtttgcaaaaag 791 Query: 399 tttatgcaagatcccatgga 418 || ||||||||||||||||| Sbjct: 792 ttcatgcaagatcccatgga 811
>ref|NM_164646.1| Drosophila melanogaster Helicase at 25E CG7269-RA, transcript variant A (Hel25E), mRNA Length = 1763 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 339 aaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaa 398 ||||||||||||||||| || || ||| | |||||||| ||||| || |||||||| || Sbjct: 838 aaacaagtgatgatgttctctgccacattgagcaaggacattcgtcccgtttgcaaaaag 897 Query: 399 tttatgcaagatcccatgga 418 || ||||||||||||||||| Sbjct: 898 ttcatgcaagatcccatgga 917
>dbj|AK115940.1| Ciona intestinalis cDNA, clone:citb001c19, full insert sequence Length = 1052 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 330 ccccatgataaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtt 389 |||||||| || ||||||||||||||| || || |||||||| || || || || || Sbjct: 672 ccccatgagaagcaagtgatgatgtttagtgccacgctcagcaaagatatccgaccagtg 731 Query: 390 tgcaagaaatttatgcaagatcccatggaaatttatgttgatga 433 |||||||| || ||||||||||| |||||| ||||||||||||| Sbjct: 732 tgcaagaagttcatgcaagatccaatggaagtttatgttgatga 775
>emb|CT033635.1| Platynereis dumerilii EST IB0AAA17AE03EM1 Length = 866 Score = 71.9 bits (36), Expect = 2e-09 Identities = 138/172 (80%) Strand = Plus / Plus Query: 248 gcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgt 307 |||||||||||| ||||| |||||||||||| | || |||||||||||| ||||||| Sbjct: 601 gcatttcattctggatgagtgtgacaagatgttggagcaacttgacatgcgcagagatgt 660 Query: 308 ccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacact 367 || || ||||||| ||||| || || | |||||||| |||||||| || || || || Sbjct: 661 gcaagacatcttcagaatgaccccacacggcaaacaagttatgatgttctccgccaccct 720 Query: 368 cagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaa 419 |||||| || || || | |||||||| ||||||||||||||||||||| Sbjct: 721 gtccaaggatatccgaccaatctgcaagaagtttatgcaagatcccatggaa 772
>emb|CT033441.1| Platynereis dumerilii EST IB0AAA20BC01EM1 Length = 904 Score = 71.9 bits (36), Expect = 2e-09 Identities = 138/172 (80%) Strand = Plus / Plus Query: 248 gcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgt 307 |||||||||||| ||||| |||||||||||| | || |||||||||||| ||||||| Sbjct: 612 gcatttcattctggatgagtgtgacaagatgttggagcaacttgacatgcgcagagatgt 671 Query: 308 ccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacact 367 || || ||||||| ||||| || || | |||||||| |||||||| || || || || Sbjct: 672 gcaagacatcttcagaatgaccccacacggcaaacaagttatgatgttctccgccaccct 731 Query: 368 cagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaa 419 |||||| || || || | |||||||| ||||||||||||||||||||| Sbjct: 732 gtccaaggatatccgaccaatctgcaagaagtttatgcaagatcccatggaa 783
>emb|CT033309.1| Platynereis dumerilii EST IB0AAA22DB06EM1 Length = 920 Score = 71.9 bits (36), Expect = 2e-09 Identities = 138/172 (80%) Strand = Plus / Plus Query: 248 gcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgt 307 |||||||||||| ||||| |||||||||||| | || |||||||||||| ||||||| Sbjct: 612 gcatttcattctggatgagtgtgacaagatgttggagcaacttgacatgcgcagagatgt 671 Query: 308 ccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacact 367 || || ||||||| ||||| || || | |||||||| |||||||| || || || || Sbjct: 672 gcaagacatcttcagaatgaccccacacggcaaacaagttatgatgttctccgccaccct 731 Query: 368 cagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaa 419 |||||| || || || | |||||||| ||||||||||||||||||||| Sbjct: 732 gtccaaggatatccgaccaatctgcaagaagtttatgcaagatcccatggaa 783
>emb|CT033123.1| Platynereis dumerilii EST IB0AAA26BF04EM1 Length = 942 Score = 71.9 bits (36), Expect = 2e-09 Identities = 138/172 (80%) Strand = Plus / Plus Query: 248 gcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgt 307 |||||||||||| ||||| |||||||||||| | || |||||||||||| ||||||| Sbjct: 602 gcatttcattctggatgagtgtgacaagatgttggagcaacttgacatgcgcagagatgt 661 Query: 308 ccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacact 367 || || ||||||| ||||| || || | |||||||| |||||||| || || || || Sbjct: 662 gcaagacatcttcagaatgaccccacacggcaaacaagttatgatgttctccgccaccct 721 Query: 368 cagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaa 419 |||||| || || || | |||||||| ||||||||||||||||||||| Sbjct: 722 gtccaaggatatccgaccaatctgcaagaagtttatgcaagatcccatggaa 773
>emb|CT033090.1| Platynereis dumerilii EST IB0AAA27AA10EM1 Length = 884 Score = 71.9 bits (36), Expect = 2e-09 Identities = 138/172 (80%) Strand = Plus / Plus Query: 248 gcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgt 307 |||||||||||| ||||| |||||||||||| | || |||||||||||| ||||||| Sbjct: 612 gcatttcattctggatgagtgtgacaagatgttggagcaacttgacatgcgcagagatgt 671 Query: 308 ccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacact 367 || || ||||||| ||||| || || | |||||||| |||||||| || || || || Sbjct: 672 gcaagacatcttcagaatgaccccacacggcaaacaagttatgatgttctccgccaccct 731 Query: 368 cagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaa 419 |||||| || || || | |||||||| ||||||||||||||||||||| Sbjct: 732 gtccaaggatatccgaccaatctgcaagaagtttatgcaagatcccatggaa 783
>emb|CT033006.1| Platynereis dumerilii EST IB0AAA28AF08EM1 Length = 886 Score = 71.9 bits (36), Expect = 2e-09 Identities = 138/172 (80%) Strand = Plus / Plus Query: 248 gcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgt 307 |||||||||||| ||||| |||||||||||| | || |||||||||||| ||||||| Sbjct: 612 gcatttcattctggatgagtgtgacaagatgttggagcaacttgacatgcgcagagatgt 671 Query: 308 ccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacact 367 || || ||||||| ||||| || || | |||||||| |||||||| || || || || Sbjct: 672 gcaagacatcttcagaatgaccccacacggcaaacaagttatgatgttctccgccaccct 731 Query: 368 cagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaa 419 |||||| || || || | |||||||| ||||||||||||||||||||| Sbjct: 732 gtccaaggatatccgaccaatctgcaagaagtttatgcaagatcccatggaa 783
>gb|AY231673.1| Drosophila yakuba clone yak-em_Hel25E mRNA sequence Length = 780 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || ||| | |||||||| ||||| || |||||||| || || Sbjct: 508 caagtgatgatgttctctgccacattgagcaaggacattcgtcccgtttgcaaaaagttc 567 Query: 402 atgcaagatcccatgga 418 ||||||||||||||||| Sbjct: 568 atgcaagatcccatgga 584
>emb|BX071201.1|CNS09R3P Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC8CE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 905 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 715 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 774 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 775 atgcaagatcccatggaagtgtatgttga 803
>emb|BX061598.1|CNS09JOY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC42CA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 937 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 710 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 769 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 770 atgcaagatcccatggaagtgtatgttga 798
>emb|BX057437.1|CNS09GHD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC37BF01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1006 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 718 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 777 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 778 atgcaagatcccatggaagtgtatgttga 806
>emb|BX055209.1|CNS09ERH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC33DA05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 960 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 721 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 780 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 781 atgcaagatcccatggaagtgtatgttga 809
>emb|BX029114.1|CNS08UMM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA43CB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1003 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 901 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 842 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 841 atgcaagatcccatggaagtgtatgttga 813
>emb|BX029113.1|CNS08UML Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA43CB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 991 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 732 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 791 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 792 atgcaagatcccatggaagtgtatgttga 820
>emb|BX019862.1|CNS08NHM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA3BB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1003 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 720 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 779 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 780 atgcaagatcccatggaagtgtatgttga 808
>emb|BX016176.1|CNS08KN8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA24BB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 994 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 900 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 841 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 840 atgcaagatcccatggaagtgtatgttga 812
>emb|BX016175.1|CNS08KN7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA24BB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 954 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 733 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 792 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 793 atgcaagatcccatggaagtgtatgttga 821
>emb|BX015458.1|CNS08K3A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23AH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 937 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 70 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 129 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 130 atgcaagatcccatggaagtgtatgttga 158
>emb|BX012341.1|CNS08HOP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA19CE02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 915 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 754 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 813 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 814 atgcaagatcccatggaagtgtatgttga 842
>emb|BX006184.1|CNS08CXO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA10CB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 979 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 134 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 193 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 194 atgcaagatcccatggaagtgtatgttga 222
>emb|BX005773.1|CNS08CM9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA1BF11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 978 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 728 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 787 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 788 atgcaagatcccatggaagtgtatgttga 816
>ref|NM_001005157.1| Sus scrofa HLA-B associated transcript 1 (BAT1), mRNA Length = 1287 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||||||||||||||| ||| ||||||||||| ||||||||||| Sbjct: 586 gatgaatgtgacaagatgcttgaacaactcgacatgcgtcgggatgtccagga 638
>ref|XM_319825.2| Anopheles gambiae str. PEST ENSANGP00000023803 (ENSANGG00000021073), partial mRNA Length = 1396 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 785 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 844 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||||||||||||| | |||||||| Sbjct: 845 atgcaagatcccatggaagtgtatgttga 873
>gb|AY190692.1| Pagrus major DEAD/H box polypeptide mRNA, partial cds Length = 687 Score = 63.9 bits (32), Expect = 6e-07 Identities = 107/132 (81%) Strand = Plus / Plus Query: 306 gtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagcaaca 365 |||||||||||||||| | ||||||||||||| || || || |||||||| ||||| Sbjct: 241 gtccaggagatcttcaggctgacaccccatgagaagcaggttatgatgttcagtgcaacg 300 Query: 366 ctcagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaaatttat 425 || ||||||||||| ||||| || ||| || || ||||| |||||||||||| | | | Sbjct: 301 ctaagcaaggagatccgcccagtgtgccgcaagttcatgcaggatcccatggaagtgttt 360 Query: 426 gttgatgacgag 437 || ||||||||| Sbjct: 361 gtagatgacgag 372
>emb|CT032528.1| Platynereis dumerilii EST IB0AAA36DE03EM1 Length = 853 Score = 63.9 bits (32), Expect = 6e-07 Identities = 137/172 (79%) Strand = Plus / Plus Query: 248 gcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgt 307 |||||||||||| ||||| |||||||||||| | || |||||||||||| ||||||| Sbjct: 612 gcatttcattctggatgagtgtgacaagatgttggagcaacttgacatgcgcagagatgt 671 Query: 308 ccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttttcagcaacact 367 || || ||||||| ||||| || || | |||||||| |||||||| || || || || Sbjct: 672 gcaagacatcttcagaatgaccccacacggcaaacaagttatgatgttctccgccaccct 731 Query: 368 cagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaa 419 |||||| || || || | ||| |||| ||||||||||||||||||||| Sbjct: 732 gtccaaggatatccgaccaatctgctagaagtttatgcaagatcccatggaa 783
>ref|XM_968952.1| PREDICTED: Tribolium castaneum similar to CG7269-PA, isoform A (LOC662877), mRNA Length = 1416 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 378 attcgcccggtttgcaagaaatttatgcaagatcccatggaaatttatgt 427 |||||||| || |||||||| |||||||||||||| |||||| ||||||| Sbjct: 835 attcgccccgtctgcaagaagtttatgcaagatccgatggaagtttatgt 884 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 catttcattcttgatgaatgtgacaagatgct 280 |||||||||||||| || || ||||||||||| Sbjct: 706 catttcattcttgacgagtgcgacaagatgct 737
>emb|CT033113.1| Platynereis dumerilii EST IB0AAA26CA01EM1 Length = 869 Score = 60.0 bits (30), Expect = 9e-06 Identities = 153/194 (78%) Strand = Plus / Plus Query: 237 aagaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatg 296 ||||| |||| |||||||||||| || || |||||||||||| | || ||||| ||| Sbjct: 602 aagaacgtgaagcatttcattctggacgagtgtgacaagatgttggagcagcttgatatg 661 Query: 297 cgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttt 356 || ||||||| || || ||||||| ||||| || || | |||||||| |||||||| Sbjct: 662 cgcagagatgtgcaagacatcttcagaatgaccccacacggcaaacaagtcatgatgttc 721 Query: 357 tcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatg 416 || || || || |||||| || || || | |||||||| |||||||||||||||||| Sbjct: 722 tccgccaccctgtccaaggatatccgacctatctgcaagaagtttatgcaagatcccatg 781 Query: 417 gaaatttatgttga 430 ||| | |||||||| Sbjct: 782 gaagtgtatgttga 795
>emb|CT033026.1| Platynereis dumerilii EST IB0AAA27DB01EM1 Length = 925 Score = 60.0 bits (30), Expect = 9e-06 Identities = 153/194 (78%) Strand = Plus / Plus Query: 237 aagaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatg 296 ||||| |||| |||||||||||| || || |||||||||||| | || ||||| ||| Sbjct: 613 aagaacgtgaagcatttcattctggacgagtgtgacaagatgttggagcagcttgatatg 672 Query: 297 cgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttt 356 || ||||||| || || ||||||| ||||| || || | |||||||| |||||||| Sbjct: 673 cgcagagatgtgcaagacatcttcagaatgaccccacacggcaaacaagtcatgatgttc 732 Query: 357 tcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatg 416 || || || || |||||| || || || | |||||||| |||||||||||||||||| Sbjct: 733 tccgccaccctgtccaaggatatccgacctatctgcaagaagtttatgcaagatcccatg 792 Query: 417 gaaatttatgttga 430 ||| | |||||||| Sbjct: 793 gaagtgtatgttga 806
>emb|CT032448.1| Platynereis dumerilii EST IB0AAA38AE03EM1 Length = 944 Score = 60.0 bits (30), Expect = 9e-06 Identities = 153/194 (78%) Strand = Plus / Plus Query: 237 aagaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgacatg 296 ||||| |||| |||||||||||| || || |||||||||||| | || ||||| ||| Sbjct: 602 aagaacgtgaagcatttcattctggacgagtgtgacaagatgttggagcagcttgatatg 661 Query: 297 cgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatgatgttt 356 || ||||||| || || ||||||| ||||| || || | |||||||| |||||||| Sbjct: 662 cgcagagatgtgcaagacatcttcagaatgaccccacacggcaaacaagtcatgatgttc 721 Query: 357 tcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatg 416 || || || || |||||| || || || | |||||||| |||||||||||||||||| Sbjct: 722 tccgccaccctgtccaaggatatccgacctatctgcaagaagtttatgcaagatcccatg 781 Query: 417 gaaatttatgttga 430 ||| | |||||||| Sbjct: 782 gaagtgtatgttga 795
>ref|XM_708282.1| Candida albicans SC5314 hypothetical protein (CaO19.13092), mRNA Length = 873 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 378 attcgcccggtttgcaagaaatttatgcaagatcccatggaaatttatgttgatgacgag 437 ||||| || ||||| || |||||||||||| |||| |||||||||||||||| || ||| Sbjct: 292 attcgtccagtttgtaaaaaatttatgcaaaatccattggaaatttatgttgacgatgag 351 Query: 438 gctaaactgacccttcatggt 458 || ||| ||||| | |||||| Sbjct: 352 gccaaattgaccttgcatggt 372
>ref|XM_708235.1| Candida albicans SC5314 hypothetical protein (CaO19.5647), mRNA Length = 873 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 378 attcgcccggtttgcaagaaatttatgcaagatcccatggaaatttatgttgatgacgag 437 ||||| || ||||| || |||||||||||| |||| |||||||||||||||| || ||| Sbjct: 292 attcgtccagtttgtaaaaaatttatgcaaaatccattggaaatttatgttgacgatgag 351 Query: 438 gctaaactgacccttcatggt 458 || ||| ||||| | |||||| Sbjct: 352 gccaaattgaccttgcatggt 372
>emb|BX055543.1|CNS09F0R Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC34AG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 973 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 342 caagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaattt 401 |||||||||||||| || || || || ||||| || |||||||| || ||||| || || Sbjct: 742 caagtgatgatgttctccgccacgctgagcaaagaaattcgcccagtgtgcaaaaagttc 801 Query: 402 atgcaagatcccatggaaatttatgttga 430 |||||||| ||||||||| | |||||||| Sbjct: 802 atgcaagaccccatggaagtgtatgttga 830
>ref|XM_460626.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F06688g) partial mRNA Length = 1089 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 387 gtttgcaagaaatttatgcaagatcccatggaaatttatgttgatgacgaggctaa 442 ||||| ||||||||||||||| | || ||||||||||||||||||| || ||||| Sbjct: 517 gtttgtaagaaatttatgcaaaacccattggaaatttatgttgatgatgaagctaa 572
>ref|XM_644546.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box helicase, putative (283.t00009) partial mRNA Length = 1260 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 337 ataaacaagtgatgatgttttcagcaac 364 |||||||||||||||||||||||||||| Sbjct: 638 ataaacaagtgatgatgttttcagcaac 665
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 387 gtttgcaagaaatttatgcaagatcccatggaaatttatgttgatgacgaggctaa 442 ||||| ||||||||||||||| | || ||||||||||||||||||| || ||||| Sbjct: 551489 gtttgtaagaaatttatgcaaaacccattggaaatttatgttgatgatgaagctaa 551434
>ref|NM_200943.1| Danio rerio HLA-B associated transcript 1 (bat1), mRNA Length = 1915 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 252 ttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccag 311 |||||| | ||||||||||| |||||||| || ||||||||||||||| |||||||| Sbjct: 653 ttcattttggatgaatgtgataagatgctggagcaacttgacatgcgtcgggatgtccaa 712 Query: 312 gagatctt 319 || ||||| Sbjct: 713 gaaatctt 720
>gb|AF391287.1| Branchiostoma floridae cosmid MPMGc117C0356, partial sequence Length = 38554 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Plus Query: 291 gacatgcgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatg 350 |||||||| ||||| ||||||||||||||| ||||| || || || || || || ||| Sbjct: 7209 gacatgcgccgagacgtccaggagatcttccgcatgacgcctcacgagaagcaggtcatg 7268 Query: 351 atgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagat 410 ||||| || || |||||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 7269 atgttcagcgccaccctcagcaaggagatccgccccgtctgcaagaagttcatgcaagat 7328
>gb|BC055240.1| Danio rerio HLA-B associated transcript 1, mRNA (cDNA clone MGC:63773 IMAGE:2642676), complete cds Length = 1915 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 252 ttcattcttgatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccag 311 |||||| | ||||||||||| |||||||| || ||||||||||||||| |||||||| Sbjct: 653 ttcattttggatgaatgtgataagatgctggagcaacttgacatgcgtcgggatgtccaa 712 Query: 312 gagatctt 319 || ||||| Sbjct: 713 gaaatctt 720
>gb|AC011063.8|AC011063 Drosophila melanogaster, chromosome 2L, region 25D-25D, BAC clone BACR44J04, complete sequence Length = 164884 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 339 aaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaa 398 ||||||||||||||||| || || ||| | |||||||| ||||| || |||||||| || Sbjct: 151855 aaacaagtgatgatgttctctgccacattgagcaaggacattcgtcccgtttgcaaaaag 151796 Query: 399 tttatgcaagat 410 || ||||||||| Sbjct: 151795 ttcatgcaagat 151784
>gb|AC009910.5|AC009910 Drosophila melanogaster, chromosome 2L, region 25D-25E, BAC clone BACR35L07, complete sequence Length = 193924 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 339 aaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaa 398 ||||||||||||||||| || || ||| | |||||||| ||||| || |||||||| || Sbjct: 62458 aaacaagtgatgatgttctctgccacattgagcaaggacattcgtcccgtttgcaaaaag 62399 Query: 399 tttatgcaagat 410 || ||||||||| Sbjct: 62398 ttcatgcaagat 62387
>gb|AE003610.3| Drosophila melanogaster chromosome 2L, section 19 of 83 of the complete sequence Length = 260249 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 339 aaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaa 398 ||||||||||||||||| || || ||| | |||||||| ||||| || |||||||| || Sbjct: 105565 aaacaagtgatgatgttctctgccacattgagcaaggacattcgtcccgtttgcaaaaag 105506 Query: 399 tttatgcaagat 410 || ||||||||| Sbjct: 105505 ttcatgcaagat 105494
>gb|L06018.1|DRORNAHEL Drosophila melanogaster DECD family putative RNA helicase gene, complete cds Length = 2916 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 339 aaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtttgcaagaaa 398 ||||||||||||||||| || || ||| | |||||||| ||||| || |||||||| || Sbjct: 1335 aaacaagtgatgatgttctctgccacattgagcaaggacattcgtcccgtttgcaaaaag 1394 Query: 399 tttatgcaagat 410 || ||||||||| Sbjct: 1395 ttcatgcaagat 1406
>dbj|AK016960.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933428C17 product:nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1497 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| | | || |||||||| |||||||| ||||||||||| Sbjct: 657 gatgaatgtgacaagatgctgcacacgctggacatgcgccgagatgtacaggagatctt 715
>ref|XM_624891.1| PREDICTED: Apis mellifera similar to ENSANGP00000023803 (LOC552515), mRNA Length = 1644 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 371 caaggagattcgcccggtttgcaagaaatttatgcaagatcccatggaaatttatgttga 430 ||||||||| || || || ||||| ||||| |||||||||||||||||| | ||||| || Sbjct: 750 caaggagatacgtcctgtctgcaaaaaattcatgcaagatcccatggaagtctatgtgga 809 Query: 431 tga 433 ||| Sbjct: 810 tga 812
>ref|NM_133300.2| Rattus norvegicus HLA-B-associated transcript 1A (Bat1a), mRNA Length = 1660 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 264 gaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 |||||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 732 gaatgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 781
>gb|BC080243.1| Rattus norvegicus HLA-B-associated transcript 1A, mRNA (cDNA clone MGC:91440 IMAGE:7100155), complete cds Length = 1660 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 264 gaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 |||||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 732 gaatgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 781
>gb|M75168.1|RATP49A Rattus norvegicus liver nuclear protein p47 mRNA, Length = 1643 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 264 gaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 |||||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 688 gaatgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 737
>ref|XM_518349.1| PREDICTED: Pan troglodytes similar to HLA-B associated transcript 1; HLA-B associated transcript-1; DEAD-box protein; nuclear RNA helicase (DEAD family) (LOC462557), mRNA Length = 1449 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 1234 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 1286
>gb|BC000361.2| Homo sapiens HLA-B associated transcript 1, transcript variant 2, mRNA (cDNA clone MGC:8674 IMAGE:2964517), complete cds Length = 1533 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 625 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 677
>gb|BC013006.2| Homo sapiens HLA-B associated transcript 1, transcript variant 1, mRNA (cDNA clone MGC:3991 IMAGE:3010263), complete cds Length = 1638 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 718 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 770
>ref|NM_004640.5| Homo sapiens HLA-B associated transcript 1 (BAT1), transcript variant 1, mRNA Length = 2133 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 1217 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 1269
>ref|NM_080598.4| Homo sapiens HLA-B associated transcript 1 (BAT1), transcript variant 2, mRNA Length = 2003 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 1087 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 1139
>ref|XM_533895.2| PREDICTED: Canis familiaris similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 isoform 1 (LOC476689), mRNA Length = 1448 Score = 50.1 bits (25), Expect = 0.009 Identities = 147/185 (79%), Gaps = 2/185 (1%) Strand = Plus / Plus Query: 235 tgaagaatgtgaggcatttcattcttgatgaatgtgacaagatgcttgattcacttgaca 294 ||||||| |||| ||| ||| | || ||||| |||||||||||||| || || |||| Sbjct: 590 tgaagaacgtgaagcacttcgtgctggatgagtgtgacaagatgctggagcagctggaca 649 Query: 295 tgcgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtg-atgatg 353 |||| || || || |||||||||||| ||||||||||||| || || ||| |||||| Sbjct: 650 tgcggcgggacgtgcaggagatcttccgcttgacaccccatgagaagca-gtgcatgatg 708 Query: 354 ttttcagcaacactcagcaaggagattcgcccggtttgcaagaaatttatgcaagatccc 413 ||| || || || ||||||||||| | ||||| |||| ||| || |||||||||||| Sbjct: 709 tttagcgccaccctgagcaaggagatcaggccggtctgcaggaagttcatgcaagatccc 768 Query: 414 atgga 418 ||||| Sbjct: 769 atgga 773
>gb|BC004350.1| Homo sapiens cDNA clone IMAGE:3536103, **** WARNING: chimeric clone **** Length = 2060 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 1123 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 1175
>gb|BT009909.1| Homo sapiens HLA-B associated transcript 1 mRNA, complete cds Length = 1287 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 586 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 638
>emb|Z37166.1|HSBAT1MR H.sapiens BAT1 mRNA for nuclear RNA helicase (DEAD family) Length = 1658 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 754 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 806
>emb|CR859800.1| Pongo pygmaeus mRNA; cDNA DKFZp469F1834 (from clone DKFZp469F1834) Length = 1702 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 777 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 829
>emb|CR857691.1| Pongo pygmaeus mRNA; cDNA DKFZp468K0120 (from clone DKFZp468K0120) Length = 1544 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 647 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 699
>gb|BT008096.1| Synthetic construct Homo sapiens HLA-B associated transcript 1 mRNA, partial cds Length = 1287 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 586 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 638
>dbj|AK127767.1| Homo sapiens cDNA FLJ45868 fis, clone OCBBF3004487, highly similar to Probable ATP-dependent RNA helicase p47 Length = 5157 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 2057 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 2109
>emb|CR625065.1| full-length cDNA clone CS0DC019YE12 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1632 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 750 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 802
>emb|CR623314.1| full-length cDNA clone CS0DE001YF24 of Placenta of Homo sapiens (human) Length = 1624 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 746 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 798
>emb|CR620111.1| full-length cDNA clone CS0DC027YP22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1483 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 622 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 674
>emb|CR618145.1| full-length cDNA clone CS0DF037YN16 of Fetal brain of Homo sapiens (human) Length = 1420 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 590 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 642
>emb|CR614717.1| full-length cDNA clone CS0DI004YG11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1450 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 590 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 642
>emb|CR612476.1| full-length cDNA clone CS0DE005YD10 of Placenta of Homo sapiens (human) Length = 1578 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 720 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 772
>emb|CR612427.1| full-length cDNA clone CS0DG006YD05 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1526 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 613 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 665
>emb|CR608752.1| full-length cDNA clone CS0DI039YK14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1444 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 590 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 642
>emb|CR606599.1| full-length cDNA clone CS0DI053YJ09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1584 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 720 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 772
>emb|CR601722.1| full-length cDNA clone CS0DF037YE15 of Fetal brain of Homo sapiens (human) Length = 1459 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 617 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 669
>emb|CR600093.1| full-length cDNA clone CS0DF025YD14 of Fetal brain of Homo sapiens (human) Length = 1615 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 743 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 795
>emb|CR596330.1| full-length cDNA clone CS0DE004YJ13 of Placenta of Homo sapiens (human) Length = 1593 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 720 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 772
>emb|CR591582.1| full-length cDNA clone CS0DI066YK10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1413 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 580 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 632
>emb|CR590279.1| full-length cDNA clone CS0DE011YJ14 of Placenta of Homo sapiens (human) Length = 1489 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 626 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 678
>dbj|AB169496.1| Macaca fascicularis brain cDNA, clone: QccE-11261, similar to human HLA-B associated transcript 1 (BAT1), transcript variant1, mRNA, RefSeq: NM_004640.4 Length = 1712 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 805 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 857
>dbj|AK222912.1| Homo sapiens mRNA for HLA-B associated transcript 1 variant, clone: HRC02604 Length = 1664 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 739 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 791
>ref|NM_001014377.1| Canis familiaris HLA-B associated transcript 1 (BAT1), mRNA Length = 1287 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 586 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 638
>gb|AY892786.1| Synthetic construct Homo sapiens clone FLH024340.01L HLA-B associated transcript 1 (BAT1) mRNA, partial cds Length = 1287 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 586 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 638
>gb|AY892785.1| Synthetic construct Homo sapiens clone FLH024339.01L HLA-B associated transcript 1 (BAT1) mRNA, partial cds Length = 1287 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 586 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 638
>gb|AY890316.1| Synthetic construct Homo sapiens clone FLH024344.01X HLA-B associated transcript 1 (BAT1) mRNA, complete cds Length = 1287 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 586 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 638
>gb|AY890315.1| Synthetic construct Homo sapiens clone FLH024343.01X HLA-B associated transcript 1 (BAT1) mRNA, complete cds Length = 1287 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 586 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 638
>dbj|AB209217.1| Homo sapiens mRNA for HLA-B associated transcript 1 variant protein Length = 4300 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 656 gatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 708
>gb|BC024859.1| Mus musculus HLA-B-associated transcript 1A, mRNA (cDNA clone MGC:38799 IMAGE:5359825), complete cds Length = 2863 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 267 tgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 1962 tgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 2008
>ref|NM_197982.2| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 (Ddx39), mRNA Length = 1634 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 726 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 784
>emb|AJ251914.1|SSC251914 Sus scrofa MHC class I SLA genes, haplotype H01, clone BAC 493A6 Length = 158063 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttga 283 ||||||||||||||||||||||| Sbjct: 42006 gatgaatgtgacaagatgcttga 42028
>gb|BC086328.1| Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, mRNA (cDNA clone MGC:105369 IMAGE:7132938), complete cds Length = 1740 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 886 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 944
>ref|NM_053563.2| Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 (Ddx39), mRNA Length = 1740 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 886 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 944
>gb|AY255787.1| Mus musculus strain BALB/c HLA-B associated transcript 1 (Bat1a) mRNA, complete cds Length = 1423 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 267 tgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 718 tgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 764
>gb|AY255786.1| Mus musculus strain B10.D2 HLA-B associated transcript 1 (Bat1a) mRNA, complete cds Length = 1423 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 267 tgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 718 tgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 764
>emb|Z34846.1|SSBAT1G S.scrofa BAT1 gene Length = 10674 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttga 283 ||||||||||||||||||||||| Sbjct: 4507 gatgaatgtgacaagatgcttga 4529
>dbj|AK137114.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430085I15 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 3852 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 654 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 712
>dbj|AK146294.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730047P12 product:DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, full insert sequence Length = 1528 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 693 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 751
>dbj|AK150997.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830019L16 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1517 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 677 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 735
>dbj|AK145927.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530016E16 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1602 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 691 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 749
>dbj|AK152394.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830067O14 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1498 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 658 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 716
>dbj|AK164289.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030070E09 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1453 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 618 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 676
>dbj|AK168079.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730056H06 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1452 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 617 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 675
>dbj|AK162752.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130024M12 product:Nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 2057 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 1216 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 1274
>dbj|AK167890.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730035H04 product:DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, full insert sequence Length = 1452 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 618 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 676
>dbj|AK172448.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830208A11 product:DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, full insert sequence Length = 1512 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 677 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 735
>dbj|AK171507.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730223O22 product:HLA-B-associated transcript 1A, full insert sequence Length = 1712 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 267 tgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 768 tgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 814
>dbj|AK221273.1| Arabidopsis thaliana mRNA for DEAD BOX RNA helicase RH15 - like protein, complete cds, clone: RAFL24-16-J22 Length = 1181 Score = 46.1 bits (23), Expect = 0.14 Identities = 113/143 (79%) Strand = Plus / Plus Query: 414 atggaaatttatgttgatgacgaggctaaactgacccttcatggtctagttcagcactat 473 |||||||| ||||| ||||| || || || |||| |||||||| || || ||||||||| Sbjct: 372 atggaaatatatgtcgatgatgaagccaagttgactcttcatgggcttgtccagcactat 431 Query: 474 attaaactaagtgaggcggagaagaatcgaaaattgaatgatctcttagatgcgctcgac 533 || ||||| || ||| |||||| || || || |||||||| || | |||||| | ||| Sbjct: 432 atcaaactgagcgagatggagaaaaaccggaagttgaatgaccttcttgatgcgttggac 491 Query: 534 ttcaaccaaattgtgatatttgt 556 ||||| ||| |||| || ||||| Sbjct: 492 ttcaatcaagttgtcatttttgt 514
>dbj|AK088867.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430029G07 product:HLA-B-associated transcript 1A, full insert sequence Length = 1626 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 267 tgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 744 tgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 790
>dbj|AK051034.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030057O22 product:HLA-B ASSOCIATED TRANSCRIPT-1 homolog [Homo sapiens], full insert sequence Length = 1645 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 267 tgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 759 tgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 805
>dbj|AK011285.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610002F14 product:nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1422 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 587 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 645
>dbj|AK217230.1| Mus musculus cDNA, clone:Y2G0141C02, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000068056, based on BLAT search Length = 228 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 267 tgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 113 tgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 159
>dbj|AK194985.1| Mus musculus cDNA, clone:Y1G0117A13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000068056, based on BLAT search Length = 258 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 267 tgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 143 tgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 189
>gb|BC020134.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, mRNA (cDNA clone MGC:28113 IMAGE:3969048), complete cds Length = 1497 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 636 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 694
>gb|BC011067.1| Mus musculus HLA-B-associated transcript 1A, mRNA (cDNA clone MGC:19235 IMAGE:3498520), complete cds Length = 1634 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 267 tgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 734 tgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 780
>gb|AF118128.1|AF118128 Mus musculus nuclear RNA helicase Bat1 mRNA, complete cds Length = 1297 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 267 tgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 592 tgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 638
>gb|AF063447.1|AF063447 Rattus norvegicus nuclear RNA helicase mRNA, complete cds Length = 1511 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatctt 319 |||||||||||||||||||| || || |||||||| || ||||| ||||||||||| Sbjct: 682 gatgaatgtgacaagatgctggaacagctggacatgcgccgggatgtacaggagatctt 740
>ref|NM_019693.2| Mus musculus HLA-B-associated transcript 1A (Bat1a), mRNA Length = 2863 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 267 tgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 ||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 1962 tgtgacaagatgcttgaacagctcgacatgcgtcgggatgtccagga 2008
>ref|NM_001034752.1| Bos taurus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 isoform 1 (DDX39), mRNA Length = 1516 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 agcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatgga 418 ||||||||||| || || || |||| ||| || ||||||||||||||||| Sbjct: 791 agcaaggagatccgacctgtgtgcaggaagttcatgcaagatcccatgga 840
>gb|BC104616.1| Bos taurus cDNA clone IMAGE:8120500 Length = 1564 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 agcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatgga 418 ||||||||||| || || || |||| ||| || ||||||||||||||||| Sbjct: 805 agcaaggagatccgacctgtgtgcaggaagttcatgcaagatcccatgga 854
>gb|BT021050.1| Bos taurus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 (DDX39), mRNA, complete cds Length = 1516 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 agcaaggagattcgcccggtttgcaagaaatttatgcaagatcccatgga 418 ||||||||||| || || || |||| ||| || ||||||||||||||||| Sbjct: 791 agcaaggagatccgacctgtgtgcaggaagttcatgcaagatcccatgga 840
>gb|BC071505.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 39a, mRNA (cDNA clone MGC:86865 IMAGE:6903439), complete cds Length = 1638 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 396 aaatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacccttcat 455 ||||| ||||||||||| ||||| | | |||||||||||| |||| || ||||| ||| Sbjct: 800 aaattcatgcaagatccaatggaggtatttgttgatgacgaaactaagcttaccctgcat 859 Query: 456 ggtct 460 ||||| Sbjct: 860 ggtct 864
>gb|BC042330.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 39a, mRNA (cDNA clone MGC:55881 IMAGE:3818646), complete cds Length = 1539 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 396 aaatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacccttcat 455 ||||| ||||||||||| ||||| | | |||||||||||| |||| || ||||| ||| Sbjct: 712 aaattcatgcaagatccaatggaggtatttgttgatgacgaaactaagcttaccctgcat 771 Query: 456 ggtct 460 ||||| Sbjct: 772 ggtct 776
>gb|AY692907.1| Saccharomyces cerevisiae clone FLH112723.01X YDL084W gene, complete cds Length = 1341 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 339 aaacaagtgatgatgttttcagcaacact 367 |||||||| |||||||||||||| ||||| Sbjct: 721 aaacaagtcatgatgttttcagccacact 749
>ref|NM_199721.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 39a (ddx39a), mRNA Length = 1539 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 396 aaatttatgcaagatcccatggaaatttatgttgatgacgaggctaaactgacccttcat 455 ||||| ||||||||||| ||||| | | |||||||||||| |||| || ||||| ||| Sbjct: 712 aaattcatgcaagatccaatggaggtatttgttgatgacgaaactaagcttaccctgcat 771 Query: 456 ggtct 460 ||||| Sbjct: 772 ggtct 776
>ref|XM_651877.1| Entamoeba histolytica HM-1:IMSS protein kinase (6.t00088) partial mRNA Length = 5265 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 accaaattgtgatatttgtta 558 ||||||||||||||||||||| Sbjct: 3510 accaaattgtgatatttgtta 3530
>emb|AL590669.11| Human DNA sequence from clone RP11-76K24 on chromosome 1 Contains the gene for a novel protein (FLJ35728) and a CpG island, complete sequence Length = 169226 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aagatgacaccccatgataaa 341 ||||||||||||||||||||| Sbjct: 142034 aagatgacaccccatgataaa 142014
>emb|Z74132.1|SCYDL084W S.cerevisiae chromosome IV reading frame ORF YDL084w Length = 2077 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 339 aaacaagtgatgatgttttcagcaacact 367 |||||||| |||||||||||||| ||||| Sbjct: 1109 aaacaagtcatgatgttttcagccacact 1137
>emb|AL772227.5| Mouse DNA sequence from clone RP23-1O16 on chromosome 11 Contains two novel genes, the 5' end of the gene for a novel protein similar to human Class V ATPase type 10B (ATP10B) (9030605H24Rik) and the 3' end of a novel gene, complete sequence Length = 178001 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cagcaacactcagcaaggaga 378 ||||||||||||||||||||| Sbjct: 164367 cagcaacactcagcaaggaga 164387
>gb|BC102131.1| Bos taurus similar to HLA-B associated transcript 1, mRNA (cDNA clone MGC:127051 IMAGE:7942842), complete cds Length = 1673 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 |||||||| || ||||||||||| || ||||||||||| ||||||||||| Sbjct: 753 gatgaatgcgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 805
>emb|BX511233.10| Zebrafish DNA sequence from clone CH211-152P11 in linkage group 19, complete sequence Length = 193921 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 252 ttcattcttgatgaatgtgacaagatgct 280 |||||||| ||||||||||| |||||||| Sbjct: 184295 ttcattctggatgaatgtgataagatgct 184267
>emb|CR925799.3| Wallaby DNA sequence from clone GRWB-66O5, complete sequence Length = 165490 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 291 gacatgcgtcgagatgtccaggagatcttcaagatgacaccccatgataaacaagtgatg 350 ||||||||||| ||||||||||| || ||| ||||| |||||||| || || || ||| Sbjct: 52869 gacatgcgtcgggatgtccaggaaattttccgcatgaccccccatgagaagcaggtcatg 52810 Query: 351 atgtt 355 ||||| Sbjct: 52809 atgtt 52805
>ref|NM_001033629.1| Bos taurus similar to HLA-B associated transcript 1 (BAT1), mRNA Length = 1673 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccagga 313 |||||||| || ||||||||||| || ||||||||||| ||||||||||| Sbjct: 753 gatgaatgcgataagatgcttgaacagctcgacatgcgtcgggatgtccagga 805
>gb|AF539999.1| Mamestra configurata nucleopolyhedrovirus A 90/4, complete genome Length = 153656 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ttcattgaagaatgtgaggc 249 |||||||||||||||||||| Sbjct: 72403 ttcattgaagaatgtgaggc 72384
>ref|XM_641323.1| Dictyostelium discoideum hypothetical protein (DDB0190682), partial mRNA Length = 1287 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ttcattcttgatgaatgtga 271 |||||||||||||||||||| Sbjct: 586 ttcattcttgatgaatgtga 605
>gb|BC106294.1| Xenopus laevis similar to nuclear RNA helicase, mRNA (cDNA clone MGC:130793 IMAGE:7974282), complete cds Length = 1679 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgct 280 |||||||||||||||||||| Sbjct: 755 gatgaatgtgacaagatgct 774
>ref|XM_366730.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02806.4) partial mRNA Length = 1353 Score = 40.1 bits (20), Expect = 8.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgattcacttgacatgcgtcgagatgtccaggagatcttc 320 ||||| |||||||||||||| ||| |||||||||| || || || |||||||||||| Sbjct: 655 gatgagtgtgacaagatgctcgatcagattgacatgcgccgtgacgtgcaggagatcttc 714
>gb|BC055242.1| Danio rerio zgc:63783, mRNA (cDNA clone MGC:63783 IMAGE:2643605), complete cds Length = 1842 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cacattgtggttggcacacc 193 |||||||||||||||||||| Sbjct: 506 cacattgtggttggcacacc 525
>gb|BC072526.1| Rattus norvegicus cDNA clone IMAGE:7097268, containing frame-shift errors Length = 1925 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgct 280 |||||||||||||||||||| Sbjct: 622 gatgaatgtgacaagatgct 641
>gb|AC166290.7| Mus musculus BAC RP23-14P17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 242055 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 agtacctgtcagaaactaaa 107 |||||||||||||||||||| Sbjct: 9156 agtacctgtcagaaactaaa 9175
>gb|U59461.2|MBU59461 Mamestra configurata NPV-A strain 90/2, complete genome Length = 155060 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ttcattgaagaatgtgaggc 249 |||||||||||||||||||| Sbjct: 73804 ttcattgaagaatgtgaggc 73785
>ref|XM_742721.1| Aspergillus fumigatus Af293 ATP dependent RNA helicase (Afu6g02630) partial mRNA Length = 1347 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgcttgat 284 ||||||||||| |||||||||||| Sbjct: 631 gatgaatgtgataagatgcttgat 654
>gb|AC002394.1|HUAC002394 Human Chromosome 16 BAC clone CIT987SK-A-211C6, complete sequence Length = 107910 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 aggcatttcattcttgatga 265 |||||||||||||||||||| Sbjct: 77808 aggcatttcattcttgatga 77789
>gb|AC110789.6| Homo sapiens BAC clone RP11-516D7 from 4, complete sequence Length = 181262 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gcaacactcagcaaggagat 379 |||||||||||||||||||| Sbjct: 16887 gcaacactcagcaaggagat 16906
>gb|BC045239.1| Xenopus laevis similar to nuclear RNA helicase, mRNA (cDNA clone MGC:53693 IMAGE:4889168), complete cds Length = 1518 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgct 280 |||||||||||||||||||| Sbjct: 623 gatgaatgtgacaagatgct 642
>gb|AC144726.6| Medicago truncatula clone mth2-7k13, complete sequence Length = 138586 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 agtgatgatgttttcagcaa 363 |||||||||||||||||||| Sbjct: 55123 agtgatgatgttttcagcaa 55142
>gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete sequence Length = 129053 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 aattgtgatatttgttaaaagtgt 565 ||||||||||||||||||| |||| Sbjct: 117644 aattgtgatatttgttaaatgtgt 117667
>gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete sequence Length = 117666 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 aattgtgatatttgttaaaagtgt 565 ||||||||||||||||||| |||| Sbjct: 34015 aattgtgatatttgttaaatgtgt 33992
>ref|XM_499973.1| Yarrowia lipolytica CLIB122, YALI0A18139g predicted mRNA Length = 1134 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 ttgacatgcgtcgagatgtccaggagat 316 |||| ||||| ||||||||||||||||| Sbjct: 464 ttgatatgcgacgagatgtccaggagat 491
>emb|AL390834.24| Human DNA sequence from clone RP11-468L18 on chromosome 10 Contains an unactive progesterone receptor, 23 kD (TEBP) pseudogene, complete sequence Length = 124557 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 aaacaagtgatgatgttttc 358 |||||||||||||||||||| Sbjct: 28895 aaacaagtgatgatgttttc 28876
>emb|AL356968.41| Human DNA sequence from clone RP11-329A14 on chromosome 1 Contains the 5' end of the SPATA6 gene for spermatogenesis associated 6, an amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 2 (ALS2CR2) pseudogene, a ribosomal protein L21 (RPL21) pseudogene and a CpG island, complete sequence Length = 173373 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ttcattcttgatgaatgtga 271 |||||||||||||||||||| Sbjct: 168909 ttcattcttgatgaatgtga 168928
>emb|AL136122.6| Human DNA sequence from clone RP3-413L20 on chromosome 6, complete sequence Length = 54475 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 tgatatttgttaaaagtgtt 566 |||||||||||||||||||| Sbjct: 27694 tgatatttgttaaaagtgtt 27713
>gb|AY298950.1| Xenopus laevis DECD-box RNA helicase (DDX39) mRNA, complete cds Length = 1653 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgct 280 |||||||||||||||||||| Sbjct: 740 gatgaatgtgacaagatgct 759
>ref|XM_782329.1| PREDICTED: Strongylocentrotus purpuratus similar to mitochondrial ribosomal protein L28 (LOC582377), mRNA Length = 927 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 aagatcccatggaaatttat 425 |||||||||||||||||||| Sbjct: 107 aagatcccatggaaatttat 126
>gb|AC138781.4| Homo sapiens BAC clone RP11-366H4 from 4, complete sequence Length = 162771 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gcaacactcagcaaggagat 379 |||||||||||||||||||| Sbjct: 59240 gcaacactcagcaaggagat 59259
>emb|BX883046.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 5/11 Length = 349047 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gaatgtgacaagatgcttga 283 |||||||||||||||||||| Sbjct: 95370 gaatgtgacaagatgcttga 95389
>gb|AC164432.3| Mus musculus BAC clone RP23-394G23 from chromosome 8, complete sequence Length = 220224 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gatgaatgtgacaagatgct 280 |||||||||||||||||||| Sbjct: 47419 gatgaatgtgacaagatgct 47400
>emb|AJ314857.1|RNO314857 Rattus norvegicus Nfkbil1 gene (partial), Atp6G, Bat1, RT1-C/E1, RT1-C/E2, RT1-C/E3, RT1-C/E4, RT1-C/E5, RT1-C/E7 genes and RT1-C/E6, RT1-C/E8, RT1-C/E9 pseudogenes Length = 198911 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gaatgtgacaagatgcttga 283 |||||||||||||||||||| Sbjct: 13186 gaatgtgacaagatgcttga 13205
>emb|BX901917.9| Zebrafish DNA sequence from clone DKEY-32E10 in linkage group 5, complete sequence Length = 238589 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 attgaagaatgaatgccctcacat 178 ||||||||||||||||||| |||| Sbjct: 155606 attgaagaatgaatgccctgacat 155583
>gb|AC107025.3| Homo sapiens 3 BAC RP11-474M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178033 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 acaggctgctctgtgaatgc 605 |||||||||||||||||||| Sbjct: 29631 acaggctgctctgtgaatgc 29612
>ref|NM_213451.1| Danio rerio zgc:63783 (zgc:63783), mRNA Length = 1842 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cacattgtggttggcacacc 193 |||||||||||||||||||| Sbjct: 506 cacattgtggttggcacacc 525
>emb|CR385064.7| Zebrafish DNA sequence from clone CH211-236H18 in linkage group 5, complete sequence Length = 185245 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 attgaagaatgaatgccctcacat 178 ||||||||||||||||||| |||| Sbjct: 67148 attgaagaatgaatgccctgacat 67171
>gb|AC007518.32| Mus musculus chromosome , clone CT7-345D4, complete sequence Length = 193714 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 agtacctgtcagaaactaaa 107 |||||||||||||||||||| Sbjct: 87442 agtacctgtcagaaactaaa 87461
>gb|AF387339.1| Rattus norvegicus IkBL, vacuolar ATPase NG38, Bat1, and MHC class I antigen (RT1.46) genes, complete cds Length = 36516 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gaatgtgacaagatgcttga 283 |||||||||||||||||||| Sbjct: 12080 gaatgtgacaagatgcttga 12099
>gb|AC092185.3| Homo sapiens 3q BAC RP11-148O7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165962 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 atcccatggaaatttatgtt 428 |||||||||||||||||||| Sbjct: 89205 atcccatggaaatttatgtt 89224
>dbj|AK149475.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730023D16 product:similar to Nuclear RNA helicase, DECD variant of DEAD box family [Mus musculus], full insert sequence Length = 1924 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgct 280 |||||||||||||||||||| Sbjct: 654 gatgaatgtgacaagatgct 673
>gb|AC105410.1| Homo sapiens chromosome 16 clone CTD-2348G11, complete sequence Length = 133838 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 aggcatttcattcttgatga 265 |||||||||||||||||||| Sbjct: 26634 aggcatttcattcttgatga 26615
>dbj|AK151395.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830028P17 product:Nuclear RNA helicase, DECD variant of DEAD box family homolog [Mus musculus], full insert sequence Length = 1552 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgct 280 |||||||||||||||||||| Sbjct: 658 gatgaatgtgacaagatgct 677
>ref|XM_697557.1| PREDICTED: Danio rerio hypothetical protein LOC554540 (LOC554540), mRNA Length = 1823 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cacattgtggttggcacacc 193 |||||||||||||||||||| Sbjct: 504 cacattgtggttggcacacc 523
>gb|AC010590.7|AC010590 Homo sapiens chromosome 5 clone CTC-441F14, complete sequence Length = 92602 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 tatttgttaaaagtgttggt 569 |||||||||||||||||||| Sbjct: 74739 tatttgttaaaagtgttggt 74720
>dbj|AK012002.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610307C23 product:nuclear RNA helicase, DECD variant of DEAD box family, full insert sequence Length = 1563 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gatgaatgtgacaagatgct 280 |||||||||||||||||||| Sbjct: 655 gatgaatgtgacaagatgct 674
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ttttcagcaacactcagcaa 373 |||||||||||||||||||| Sbjct: 24335327 ttttcagcaacactcagcaa 24335308
>gb|AC011361.4|AC011361 Homo sapiens chromosome 5 clone CTC-482N19, complete sequence Length = 189893 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 tatttgttaaaagtgttggt 569 |||||||||||||||||||| Sbjct: 20242 tatttgttaaaagtgttggt 20223
>gb|AC133529.3| Homo sapiens BAC clone RP11-458M1 from 4, complete sequence Length = 179257 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gcaacactcagcaaggagat 379 |||||||||||||||||||| Sbjct: 13158 gcaacactcagcaaggagat 13177
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406G08 Length = 144233 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 tgtccaggagatcttcaagatgac 328 ||||||||||| |||||||||||| Sbjct: 98868 tgtccaggagagcttcaagatgac 98845
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1579_C03 Length = 122851 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ttttcagcaacactcagcaa 373 |||||||||||||||||||| Sbjct: 68520 ttttcagcaacactcagcaa 68501
>dbj|AK027211.1| Homo sapiens cDNA: FLJ23558 fis, clone LNG09703 Length = 2365 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 aggcatttcattcttgatga 265 |||||||||||||||||||| Sbjct: 2276 aggcatttcattcttgatga 2295
>gb|AC153619.5| Mus musculus 6 BAC RP23-365G1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 116250 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 agtacctgtcagaaactaaa 107 |||||||||||||||||||| Sbjct: 101404 agtacctgtcagaaactaaa 101423
>gb|AE000511.1| Helicobacter pylori 26695, complete genome Length = 1667867 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aaatttatgcaagatcccat 415 |||||||||||||||||||| Sbjct: 738351 aaatttatgcaagatcccat 738370
>gb|AC134525.5| Mus musculus BAC clone RP24-496F7 from 8, complete sequence Length = 215900 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gatgaatgtgacaagatgct 280 |||||||||||||||||||| Sbjct: 151507 gatgaatgtgacaagatgct 151488
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 ttgacatgcgtcgagatgtccaggagat 316 |||| ||||| ||||||||||||||||| Sbjct: 1167573 ttgatatgcgacgagatgtccaggagat 1167600
>emb|AL808105.15| Mouse DNA sequence from clone RP23-22G24 on chromosome 4, complete sequence Length = 252003 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gaatgcaattttcctgcaat 619 |||||||||||||||||||| Sbjct: 96114 gaatgcaattttcctgcaat 96133 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,855,019 Number of Sequences: 3902068 Number of extensions: 5855019 Number of successful extensions: 113355 Number of sequences better than 10.0: 218 Number of HSP's better than 10.0 without gapping: 171 Number of HSP's successfully gapped in prelim test: 48 Number of HSP's that attempted gapping in prelim test: 112752 Number of HSP's gapped (non-prelim): 553 length of query: 644 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 621 effective length of database: 17,143,297,704 effective search space: 10645987874184 effective search space used: 10645987874184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
