ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalc21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476545.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
3dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
4gb|AY113455.1| Drosophila melanogaster RE36155 full insert cDNA 48 0.031
5ref|NM_164830.3| Drosophila melanogaster Sema-1a CG18405-RA (Sem... 48 0.031
6gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, r... 48 0.031
7gb|AC008330.3|AC008330 Drosophila melanogaster, chromosome 2L, r... 48 0.031
8gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30... 48 0.031
9gb|AY794670.1| Adenocline pauciflora tRNA-Leu (trnL) gene and tr... 44 0.49
10ref|XM_720487.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 44 0.49
11gb|AC156645.2| Mus musculus BAC clone RP23-59I22 from chromosome... 44 0.49
12gb|AC109782.7| Homo sapiens 3 BAC RP11-346M10 (Roswell Park Canc... 44 0.49
13gb|AC108714.3| Homo sapiens 3p BAC RP11-146G16 (Roswell Park Can... 44 0.49
14gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 44 0.49
15emb|CR388067.9| Zebrafish DNA sequence from clone CH211-169K21 i... 42 1.9
16emb|AL353590.14| Human DNA sequence from clone RP11-420P23 on ch... 42 1.9
17gb|AC092952.4| Homo sapiens 3 BAC RP11-332P22 (Roswell Park Canc... 42 1.9
18gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 1.9
19gb|AC013751.6|AC013751 Homo sapiens chromosome , clone RP11-298P... 42 1.9
20emb|Z78415.1|CEC17G1 Caenorhabditis elegans Cosmid C17G1, comple... 42 1.9
21gb|AF222890.1| Trichophyton rubrum strain 97-12332 ribosomal DNA... 40 7.6
22gb|AF222887.1| Trichophyton rubrum strain NCPF 295 putative 25S ... 40 7.6
23gb|AC004646.1| Homo sapiens chromosome 16, cosmid clone 441H9 (L... 40 7.6
24gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome... 40 7.6
25gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, comp... 40 7.6
26gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, c... 40 7.6
27gb|AC120397.7| Mus musculus chromosome 18, clone RP24-332E21, co... 40 7.6
28gb|AC125379.4| Mus musculus BAC clone RP23-53B19 from chromosome... 40 7.6
29ref|NM_152457.1| Homo sapiens zinc finger protein 597 (ZNF597), ... 40 7.6
30gb|AC108838.20| Mus musculus chromosome 18, clone RP23-326N14, c... 40 7.6
31ref|XM_673261.1| Plasmodium berghei strain ANKA hypothetical pro... 40 7.6
32emb|BX546468.1| Human DNA sequence from clone RP5-1111N9 on chro... 40 7.6
33emb|AL607077.4| Human DNA sequence from clone RP11-374I15 on chr... 40 7.6
34emb|AL354810.8| Human DNA sequence from clone RP11-527N12 on chr... 40 7.6
35gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence 40 7.6
36gb|AC063948.44| Homo sapiens 12 BAC RP11-321F8 (Roswell Park Can... 40 7.6
37gb|BC029899.1| Homo sapiens zinc finger protein 597, mRNA (cDNA ... 40 7.6
38emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen... 40 7.6
39emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, c... 40 7.6
40emb|AL080237.1|ATF3I3 Arabidopsis thaliana DNA chromosome 4, BAC... 40 7.6
41emb|AL031907.1|SPCC18 S.pombe chromosome III cosmid c18 40 7.6
42gb|AC025283.6| Homo sapiens chromosome 16 clone RP11-433P17, com... 40 7.6
43emb|CR352324.11| Zebrafish DNA sequence from clone CH211-218L14 ... 40 7.6
44gb|AF512431.1| Saccharothrix mutabilis subsp. capreolus nonribos... 40 7.6
45dbj|AK057633.1| Homo sapiens cDNA FLJ33071 fis, clone TRACH20002... 40 7.6
46gb|AC007434.8| Homo sapiens, clone RP11-17A8, complete sequence 40 7.6
47emb|BX649593.5| Zebrafish DNA sequence from clone CH211-12G4 in ... 40 7.6
48emb|BX901941.5| Mouse DNA sequence from clone RP23-344H22 on chr... 40 7.6
49dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
50dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
51emb|BX572076.4| Zebrafish DNA sequence from clone DKEY-69N5 in l... 40 7.6
52gb|AF222889.1|AF222889 Trichophyton rubrum strain T2/2248 riboso... 40 7.6
53gb|AC090358.16| Homo sapiens chromosome 18, clone RP11-775G23, c... 40 7.6
54dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
55dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
56dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
57emb|AL808134.17| Mouse DNA sequence from clone RP23-135E1 on chr... 40 7.6
58emb|AL138976.5|CNS01DWY Human chromosome 14 DNA sequence BAC R-4... 40 7.6
59gb|AC110160.10| Mus musculus chromosome 1, clone RP23-66A20, com... 40 7.6
60emb|CT010503.10| Mouse DNA sequence from clone RP23-461N23 on ch... 40 7.6
61emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9... 40 7.6 
>ref|XM_476545.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2319

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                       
Query: 182 cccgctccccggcgaggtgcctgcgtggttcatccgcggtctcctgccgccactcgccgt 241
           ||||||||| || ||| |||| |||||||||   ||||| |||| |||||| ||||||||
Sbjct: 345 cccgctcccgggggagatgccggcgtggttcgggcgcggcctcccgccgccgctcgccgt 404

                                                               
Query: 242 ggtcgagctccgctaggtcgcagtcaatggcacgctcccgcccaatctcggc 293
           | |||| |||||||  | ||| ||||||||||||||||||||| ||||||||
Sbjct: 405 gctcgacctccgctccgccgcggtcaatggcacgctcccgcccgatctcggc 456
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                           
Query: 182     cccgctccccggcgaggtgcctgcgtggttcatccgcggtctcctgccgccactcgccgt 241
               ||||||||| || ||| |||| |||||||||   ||||| |||| |||||| ||||||||
Sbjct: 1884053 cccgctcccgggggagatgccggcgtggttcgggcgcggcctcccgccgccgctcgccgt 1884112

                                                                   
Query: 242     ggtcgagctccgctaggtcgcagtcaatggcacgctcccgcccaatctcggc 293
               | |||| |||||||  | ||| ||||||||||||||||||||| ||||||||
Sbjct: 1884113 gctcgacctccgctccgccgcggtcaatggcacgctcccgcccgatctcggc 1884164
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>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0507H12
          Length = 143030

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                         
Query: 182   cccgctccccggcgaggtgcctgcgtggttcatccgcggtctcctgccgccactcgccgt 241
             ||||||||| || ||| |||| |||||||||   ||||| |||| |||||| ||||||||
Sbjct: 88632 cccgctcccgggggagatgccggcgtggttcgggcgcggcctcccgccgccgctcgccgt 88691

                                                                 
Query: 242   ggtcgagctccgctaggtcgcagtcaatggcacgctcccgcccaatctcggc 293
             | |||| |||||||  | ||| ||||||||||||||||||||| ||||||||
Sbjct: 88692 gctcgacctccgctccgccgcggtcaatggcacgctcccgcccgatctcggc 88743
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>gb|AY113455.1| Drosophila melanogaster RE36155 full insert cDNA
          Length = 4215

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 390 aaatttgttatatttactttatac 413
           ||||||||||||||||||||||||
Sbjct: 778 aaatttgttatatttactttatac 755
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>ref|NM_164830.3| Drosophila melanogaster Sema-1a CG18405-RA (Sema-1a), mRNA
          Length = 5310

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 390 aaatttgttatatttactttatac 413
           ||||||||||||||||||||||||
Sbjct: 778 aaatttgttatatttactttatac 755
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>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone
              BACR02I15, complete sequence
          Length = 186490

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 390    aaatttgttatatttactttatac 413
              ||||||||||||||||||||||||
Sbjct: 167109 aaatttgttatatttactttatac 167086
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>gb|AC008330.3|AC008330 Drosophila melanogaster, chromosome 2L, region 29D-29E, BAC clone
             BACR23B08, complete sequence
          Length = 161927

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 390   aaatttgttatatttactttatac 413
             ||||||||||||||||||||||||
Sbjct: 79857 aaatttgttatatttactttatac 79834
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>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete
              sequence
          Length = 308031

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 390    aaatttgttatatttactttatac 413
              ||||||||||||||||||||||||
Sbjct: 183271 aaatttgttatatttactttatac 183248
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>gb|AY794670.1| Adenocline pauciflora tRNA-Leu (trnL) gene and trnL-trnF intergenic
           spacer, partial sequence; chloroplast
          Length = 752

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 402 tttactttatactttctggggt 423
           ||||||||||||||||||||||
Sbjct: 269 tttactttatactttctggggt 248
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>ref|XM_720487.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05161)
            partial mRNA
          Length = 3492

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 388  ataaatttgttatatttacttt 409
            ||||||||||||||||||||||
Sbjct: 3136 ataaatttgttatatttacttt 3115
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>gb|AC156645.2| Mus musculus BAC clone RP23-59I22 from chromosome 12, complete sequence
          Length = 247201

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 397    ttatatttactttatactttct 418
              ||||||||||||||||||||||
Sbjct: 119018 ttatatttactttatactttct 118997
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>gb|AC109782.7| Homo sapiens 3 BAC RP11-346M10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163591

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 398   tatatttactttatactttctg 419
             ||||||||||||||||||||||
Sbjct: 18124 tatatttactttatactttctg 18103
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>gb|AC108714.3| Homo sapiens 3p BAC RP11-146G16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 151143

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 398    tatatttactttatactttctg 419
              ||||||||||||||||||||||
Sbjct: 121162 tatatttactttatactttctg 121141
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 28      gcccgctggccgccgtcgccgc 49
               ||||||||||||||||||||||
Sbjct: 3245943 gcccgctggccgccgtcgccgc 3245964



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 30      ccgctggccgccgtcgccgc 49
               ||||||||||||||||||||
Sbjct: 3505912 ccgctggccgccgtcgccgc 3505931
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>emb|CR388067.9| Zebrafish DNA sequence from clone CH211-169K21 in linkage group 25,
              complete sequence
          Length = 163519

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 507    ataaaaattatatatgtgaaa 527
              |||||||||||||||||||||
Sbjct: 101948 ataaaaattatatatgtgaaa 101928
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>emb|AL353590.14| Human DNA sequence from clone RP11-420P23 on chromosome 9, complete
             sequence
          Length = 159927

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 392   atttgttatatttactttatacttt 416
             |||||||||||||| ||||||||||
Sbjct: 75218 atttgttatatttattttatacttt 75194
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>gb|AC092952.4| Homo sapiens 3 BAC RP11-332P22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168234

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 503   agacataaaaattatatatgt 523
             |||||||||||||||||||||
Sbjct: 18220 agacataaaaattatatatgt 18240
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   gcccgctccccggcgaggtgc 201
             |||||||||||||||||||||
Sbjct: 72744 gcccgctccccggcgaggtgc 72724



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    ggcccgctccccggcgaggt 199
              ||||||||||||||||||||
Sbjct: 768365 ggcccgctccccggcgaggt 768384
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>gb|AC013751.6|AC013751 Homo sapiens chromosome , clone RP11-298P6, complete sequence
          Length = 205816

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 500    aagagacataaaaattatata 520
              |||||||||||||||||||||
Sbjct: 157636 aagagacataaaaattatata 157616
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>emb|Z78415.1|CEC17G1 Caenorhabditis elegans Cosmid C17G1, complete sequence
          Length = 37990

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 306   ctgactaggcttctcctcttc 326
             |||||||||||||||||||||
Sbjct: 25309 ctgactaggcttctcctcttc 25289
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>gb|AF222890.1| Trichophyton rubrum strain 97-12332 ribosomal DNA non-transcribed
           spacer region
          Length = 1538

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  cgccgtcgccgcatctctgc 57
           ||||||||||||||||||||
Sbjct: 588 cgccgtcgccgcatctctgc 607
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>gb|AF222887.1| Trichophyton rubrum strain NCPF 295 putative 25S ribosomal RNA and
            putative 18S ribosomal RNA genes, partial sequence
          Length = 2948

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   cgccgtcgccgcatctctgc 57
            ||||||||||||||||||||
Sbjct: 1517 cgccgtcgccgcatctctgc 1536
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>gb|AC004646.1| Homo sapiens chromosome 16, cosmid clone 441H9 (LANL), complete
             sequence
          Length = 36767

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   aatttgttatatttacttta 410
             ||||||||||||||||||||
Sbjct: 26862 aatttgttatatttacttta 26881
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>gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome 9, complete sequence
          Length = 194427

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 505    acataaaaattatatatgtg 524
              ||||||||||||||||||||
Sbjct: 135447 acataaaaattatatatgtg 135466
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>gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, complete sequence
          Length = 165714

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 388    ataaatttgttatatttactttat 411
              ||||||||||| ||||||||||||
Sbjct: 132618 ataaatttgttttatttactttat 132595
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>gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, complete sequence
          Length = 213736

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   aagagacataaaaattatat 519
             ||||||||||||||||||||
Sbjct: 27826 aagagacataaaaattatat 27845
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>gb|AC120397.7| Mus musculus chromosome 18, clone RP24-332E21, complete sequence
          Length = 178502

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 380   tctatcgtataaatttgttatatttactttat 411
             ||||| ||||||||||| ||||||| ||||||
Sbjct: 19031 tctattgtataaatttgctatattttctttat 19062
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>gb|AC125379.4| Mus musculus BAC clone RP23-53B19 from chromosome 12, complete sequence
          Length = 225930

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    gttatatttactttatactt 415
              ||||||||||||||||||||
Sbjct: 211931 gttatatttactttatactt 211950
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>ref|NM_152457.1| Homo sapiens zinc finger protein 597 (ZNF597), mRNA
          Length = 1838

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 391  aatttgttatatttacttta 410
            ||||||||||||||||||||
Sbjct: 1476 aatttgttatatttacttta 1457
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>gb|AC108838.20| Mus musculus chromosome 18, clone RP23-326N14, complete sequence
          Length = 173862

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 380    tctatcgtataaatttgttatatttactttat 411
              ||||| ||||||||||| ||||||| ||||||
Sbjct: 145318 tctattgtataaatttgctatattttctttat 145349
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>ref|XM_673261.1| Plasmodium berghei strain ANKA hypothetical protein (PB000162.02.0)
           partial mRNA
          Length = 3261

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 392 atttgttatatttactttat 411
           ||||||||||||||||||||
Sbjct: 687 atttgttatatttactttat 668
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>emb|BX546468.1| Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3,
             complete sequence
          Length = 61422

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 388   ataaatttgttatatttactttat 411
             |||||||||||||||||| |||||
Sbjct: 44615 ataaatttgttatatttattttat 44592
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>emb|AL607077.4| Human DNA sequence from clone RP11-374I15 on chromosome 6 Contains a
             pseudogene similar to part of acalsia, adrenocortical
             insufficiency, alacrimia (Allgrove, triple-A) (AAAS),
             complete sequence
          Length = 175466

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 501   agagacataaaaattatata 520
             ||||||||||||||||||||
Sbjct: 20403 agagacataaaaattatata 20384
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>emb|AL354810.8| Human DNA sequence from clone RP11-527N12 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 178323

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 513    attatatatgtgaaactttt 532
              ||||||||||||||||||||
Sbjct: 103566 attatatatgtgaaactttt 103547
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>gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence
          Length = 147908

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   agtggcgattgtgcttttga 449
             ||||||||||||||||||||
Sbjct: 12044 agtggcgattgtgcttttga 12025
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>gb|AC063948.44| Homo sapiens 12 BAC RP11-321F8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 146502

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 397    ttatatttactttatacttt 416
              ||||||||||||||||||||
Sbjct: 142989 ttatatttactttatacttt 142970
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>gb|BC029899.1| Homo sapiens zinc finger protein 597, mRNA (cDNA clone MGC:35280
            IMAGE:5175734), complete cds
          Length = 1838

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 391  aatttgttatatttacttta 410
            ||||||||||||||||||||
Sbjct: 1476 aatttgttatatttacttta 1457
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>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7
          Length = 349122

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    acagcaatgacattcatatt 480
              ||||||||||||||||||||
Sbjct: 244174 acagcaatgacattcatatt 244193
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>emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 3
          Length = 196149

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   ataaatttgttatatttact 407
             ||||||||||||||||||||
Sbjct: 47868 ataaatttgttatatttact 47887
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>emb|AL080237.1|ATF3I3 Arabidopsis thaliana DNA chromosome 4, BAC clone F3I3, partial
            sequence (ESSA project)
          Length = 22145

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 388  ataaatttgttatatttact 407
            ||||||||||||||||||||
Sbjct: 6408 ataaatttgttatatttact 6427
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>emb|AL031907.1|SPCC18 S.pombe chromosome III cosmid c18
          Length = 40305

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   aaatttgttatatttacttt 409
             ||||||||||||||||||||
Sbjct: 19566 aaatttgttatatttacttt 19585
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>gb|AC025283.6| Homo sapiens chromosome 16 clone RP11-433P17, complete sequence
          Length = 179511

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 391    aatttgttatatttacttta 410
              ||||||||||||||||||||
Sbjct: 133976 aatttgttatatttacttta 133995
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>emb|CR352324.11| Zebrafish DNA sequence from clone CH211-218L14 in linkage group 12,
              complete sequence
          Length = 206894

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 510    aaaattatatatgtgaaact 529
              ||||||||||||||||||||
Sbjct: 144932 aaaattatatatgtgaaact 144913
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>gb|AF512431.1| Saccharothrix mutabilis subsp. capreolus nonribosomal peptide
             synthetase gene cluster, partial sequence
          Length = 28890

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   ctcctgccgccactcgccgt 241
             ||||||||||||||||||||
Sbjct: 18760 ctcctgccgccactcgccgt 18741
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>dbj|AK057633.1| Homo sapiens cDNA FLJ33071 fis, clone TRACH2000237, weakly similar to
            ZINC FINGER PROTEIN 184
          Length = 1789

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 391  aatttgttatatttacttta 410
            ||||||||||||||||||||
Sbjct: 1488 aatttgttatatttacttta 1469
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>gb|AC007434.8| Homo sapiens, clone RP11-17A8, complete sequence
          Length = 148359

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 513    attatatatgtgaaactttt 532
              ||||||||||||||||||||
Sbjct: 124399 attatatatgtgaaactttt 124380
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>emb|BX649593.5| Zebrafish DNA sequence from clone CH211-12G4 in linkage group 18,
             complete sequence
          Length = 71293

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   tgttatatttactttatact 414
             ||||||||||||||||||||
Sbjct: 58562 tgttatatttactttatact 58581
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>emb|BX901941.5| Mouse DNA sequence from clone RP23-344H22 on chromosome X, complete
             sequence
          Length = 138091

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   acataaaaattatatatgtg 524
             ||||||||||||||||||||
Sbjct: 58470 acataaaaattatatatgtg 58451
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 37       ccgccgtcgccgcatctctg 56
                ||||||||||||||||||||
Sbjct: 26599304 ccgccgtcgccgcatctctg 26599323
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 393     tttgttatatttactttata 412
               ||||||||||||||||||||
Sbjct: 4217595 tttgttatatttactttata 4217614
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>emb|BX572076.4| Zebrafish DNA sequence from clone DKEY-69N5 in linkage group 12, complete
              sequence
          Length = 183510

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 510    aaaattatatatgtgaaact 529
              ||||||||||||||||||||
Sbjct: 156534 aaaattatatatgtgaaact 156515
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>gb|AF222889.1|AF222889 Trichophyton rubrum strain T2/2248 ribosomal DNA non-transcribed
           spacer region
          Length = 612

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  cgccgtcgccgcatctctgc 57
           ||||||||||||||||||||
Sbjct: 502 cgccgtcgccgcatctctgc 521
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>gb|AC090358.16| Homo sapiens chromosome 18, clone RP11-775G23, complete sequence
          Length = 176680

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    aaatttgttatatttacttt 409
              ||||||||||||||||||||
Sbjct: 107981 aaatttgttatatttacttt 107962
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>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   tttgttatatttactttata 412
             ||||||||||||||||||||
Sbjct: 55562 tttgttatatttactttata 55581
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>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0460H04
          Length = 166490

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     ccgccgtcgccgcatctctg 56
              ||||||||||||||||||||
Sbjct: 132957 ccgccgtcgccgcatctctg 132976
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>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0677B10
          Length = 134423

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    ccgccgtcgccgcatctctg 56
             ||||||||||||||||||||
Sbjct: 15734 ccgccgtcgccgcatctctg 15753
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>emb|AL808134.17| Mouse DNA sequence from clone RP23-135E1 on chromosome X, complete
              sequence
          Length = 195763

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 505    acataaaaattatatatgtg 524
              ||||||||||||||||||||
Sbjct: 116142 acataaaaattatatatgtg 116123
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>emb|AL138976.5|CNS01DWY Human chromosome 14 DNA sequence BAC R-45P15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167357

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   aagagacataaaaattatat 519
             ||||||||||||||||||||
Sbjct: 82072 aagagacataaaaattatat 82091
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>gb|AC110160.10| Mus musculus chromosome 1, clone RP23-66A20, complete sequence
          Length = 179096

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    aaatttgttatatttacttt 409
              ||||||||||||||||||||
Sbjct: 141083 aaatttgttatatttacttt 141064
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>emb|CT010503.10| Mouse DNA sequence from clone RP23-461N23 on chromosome 13, complete
             sequence
          Length = 195702

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   aagagacataaaaattatat 519
             ||||||||||||||||||||
Sbjct: 55119 aagagacataaaaattatat 55100
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>emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3,
             complete sequence
          Length = 148521

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 388   ataaatttgttatatttactttat 411
             |||||||||||||||||| |||||
Sbjct: 44615 ataaatttgttatatttattttat 44592


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,063,012
Number of Sequences: 3902068
Number of extensions: 5063012
Number of successful extensions: 120532
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120038
Number of HSP's gapped (non-prelim): 494
length of query: 560
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 537
effective length of database: 17,143,297,704
effective search space: 9205950867048
effective search space used: 9205950867048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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