ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalc23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119893.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-B08, full insert sequence Length = 3219 Score = 468 bits (236), Expect = e-128 Identities = 384/431 (89%), Gaps = 8/431 (1%) Strand = Plus / Plus Query: 1 ccacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtct 60 ||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||| Sbjct: 1495 ccacgacgttcgcatcccgtaccagcag-aagcgcatgttcggcttcgtcaccttcgtct 1553 Query: 61 acccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcg 120 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1554 acccgg-agacggtgaagctgatcctcgccaagggcaacccgcacttcatctgcgacgcc 1612 Query: 121 cgcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcaggaagcag 180 || |||||||||||||| |||||||||||||| |||||||||||||||| |||||||||| Sbjct: 1613 cgtgtgctcgtcaagccatacaaggagaagggcaaggtccccgacaagtacaggaagcag 1672 Query: 181 ca------gggcgagagagtggacttctccagctgcgggtctccaaccgggctggacgcc 234 || ||||||||| |||||||||||||||||| ||||||| || || || ||| Sbjct: 1673 caccagccgggcgagagggtggacttctccagctgcactactccaactggactcgatgcc 1732 Query: 235 agagaccccttcgatctccaccagattggtgcgaggatgctgcagcactccaacagcgcc 294 |||||||||||||| | |||||| | |||||||| ||||||||||||||||||||||| Sbjct: 1733 agagaccccttcgacatgcaccagctcggtgcgagaatgctgcagcactccaacagcgcg 1792 Query: 295 aacgagatgctgctgaggaggaagctggaggagcagcagcaggcggtggagctgcagcag 354 || ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 1793 aatgagatgctgctgaggaggaagctggaggagcagcagcaggccgccgagctgcagcag 1852 Query: 355 gcgatcgagcttcagagccggcgcctcatggggctgcagatgctcgacctcaagacacgc 414 ||||||||||| || ||||| |||||||||||||||||| |||| ||| ||||| | ||| Sbjct: 1853 gcgatcgagctccacagccgccgcctcatggggctgcagctgctagacttcaagtcgcgc 1912 Query: 415 tcggccgcggc 425 | |||||||| Sbjct: 1913 gccgccgcggc 1923 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 504 cgagtcgccgcccgattccggggagc 529 ||||||||| |||||||||||||||| Sbjct: 1981 cgagtcgcctcccgattccggggagc 2006
>dbj|AK111556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056L03, full insert sequence Length = 2521 Score = 468 bits (236), Expect = e-128 Identities = 384/431 (89%), Gaps = 8/431 (1%) Strand = Plus / Plus Query: 1 ccacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtct 60 ||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||| Sbjct: 1438 ccacgacgttcgcatcccgtaccagcag-aagcgcatgttcggcttcgtcaccttcgtct 1496 Query: 61 acccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcg 120 |||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1497 acccgg-agacggtgaagctgattctcgccaagggcaacccgcacttcatctgcgacgcc 1555 Query: 121 cgcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcaggaagcag 180 ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||| Sbjct: 1556 cgcgtgctcgtcaagccatacaaggagaagggcaaggtccccgacaagtacaggaagcag 1615 Query: 181 ca------gggcgagagagtggacttctccagctgcgggtctccaaccgggctggacgcc 234 || ||||||||| |||||||||||||||||| ||||||| || || || ||| Sbjct: 1616 caccagccgggcgagagggtggacttctccagctgcactactccaactggactcgatgcc 1675 Query: 235 agagaccccttcgatctccaccagattggtgcgaggatgctgcagcactccaacagcgcc 294 |||||||||||||| | |||||| | |||||||| ||||||||||||||||||||||| Sbjct: 1676 agagaccccttcgacatgcaccagctcggtgcgagaatgctgcagcactccaacagcgcg 1735 Query: 295 aacgagatgctgctgaggaggaagctggaggagcagcagcaggcggtggagctgcagcag 354 || ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 1736 aatgagatgctgctgaggaggaagctggaggagcagcagcaggccgccgagctgcagcag 1795 Query: 355 gcgatcgagcttcagagccggcgcctcatggggctgcagatgctcgacctcaagacacgc 414 ||||||||||| || ||||| |||||||||||||||||| |||| ||| ||||| | ||| Sbjct: 1796 gcgatcgagctccacagccgccgcctcatggggctgcagctgctagacttcaagtcgcgc 1855 Query: 415 tcggccgcggc 425 | |||||||| Sbjct: 1856 gccgccgcggc 1866 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 504 cgagtcgccgcccgattccggggagc 529 ||||||||| |||||||||||||||| Sbjct: 1924 cgagtcgcctcccgattccggggagc 1949
>dbj|AK111514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B05, full insert sequence Length = 3134 Score = 468 bits (236), Expect = e-128 Identities = 384/431 (89%), Gaps = 8/431 (1%) Strand = Plus / Plus Query: 1 ccacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtct 60 ||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||| Sbjct: 1410 ccacgacgttcgcatcccgtaccagcag-aagcgcatgttcggcttcgtcaccttcgtct 1468 Query: 61 acccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcg 120 |||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1469 acccgg-agacggtgaagctgattctcgccaagggcaacccgcacttcatctgcgacgcc 1527 Query: 121 cgcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcaggaagcag 180 ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||| Sbjct: 1528 cgcgtgctcgtcaagccatacaaggagaagggcaaggtccccgacaagtacaggaagcag 1587 Query: 181 ca------gggcgagagagtggacttctccagctgcgggtctccaaccgggctggacgcc 234 || ||||||||| |||||||||||||||||| ||||||| || || || ||| Sbjct: 1588 caccagccgggcgagagggtggacttctccagctgcactactccaactggactcgatgcc 1647 Query: 235 agagaccccttcgatctccaccagattggtgcgaggatgctgcagcactccaacagcgcc 294 |||||||||||||| | |||||| | |||||||| ||||||||||||||||||||||| Sbjct: 1648 agagaccccttcgacatgcaccagctcggtgcgagaatgctgcagcactccaacagcgcg 1707 Query: 295 aacgagatgctgctgaggaggaagctggaggagcagcagcaggcggtggagctgcagcag 354 || ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 1708 aatgagatgctgctgaggaggaagctggaggagcagcagcaggccgccgagctgcagcag 1767 Query: 355 gcgatcgagcttcagagccggcgcctcatggggctgcagatgctcgacctcaagacacgc 414 ||||||||||| || ||||| |||||||||||||||||| |||| ||| ||||| | ||| Sbjct: 1768 gcgatcgagctccacagccgccgcctcatggggctgcagctgctagacttcaagtcgcgc 1827 Query: 415 tcggccgcggc 425 | |||||||| Sbjct: 1828 gccgccgcggc 1838 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 504 cgagtcgccgcccgattccggggagc 529 ||||||||| |||||||||||||||| Sbjct: 1896 cgagtcgcctcccgattccggggagc 1921
>ref|XM_479561.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2049 Score = 446 bits (225), Expect = e-122 Identities = 377/425 (88%), Gaps = 2/425 (0%) Strand = Plus / Plus Query: 1 ccacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtct 60 ||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||| Sbjct: 1164 ccacgacgttcgcatcccgtaccagcag-aagcgcatgttcggcttcgtcaccttcgtct 1222 Query: 61 acccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcg 120 |||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1223 acccgg-agacggtgaagctgattctcgccaagggcaacccgcacttcatctgcgacgcc 1281 Query: 121 cgcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcaggaagcag 180 ||||||||||||||||| |||||||||||||| ||||||||||||||| | | ||| Sbjct: 1282 cgcgtgctcgtcaagccatacaaggagaagggcaaggtccccgacaagaagcagcaccag 1341 Query: 181 cagggcgagagagtggacttctccagctgcgggtctccaaccgggctggacgccagagac 240 | ||||||||| |||||||||||||||||| ||||||| || || || ||||||||| Sbjct: 1342 ccgggcgagagggtggacttctccagctgcactactccaactggactcgatgccagagac 1401 Query: 241 cccttcgatctccaccagattggtgcgaggatgctgcagcactccaacagcgccaacgag 300 |||||||| | |||||| | |||||||| ||||||||||||||||||||||| || ||| Sbjct: 1402 cccttcgacatgcaccagctcggtgcgagaatgctgcagcactccaacagcgcgaatgag 1461 Query: 301 atgctgctgaggaggaagctggaggagcagcagcaggcggtggagctgcagcaggcgatc 360 |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 1462 atgctgctgaggaggaagctggaggagcagcagcaggccgccgagctgcagcaggcgatc 1521 Query: 361 gagcttcagagccggcgcctcatggggctgcagatgctcgacctcaagacacgctcggcc 420 ||||| || ||||| |||||||||||||||||| |||| ||| ||||| | ||| | ||| Sbjct: 1522 gagctccacagccgccgcctcatggggctgcagctgctagacttcaagtcgcgcgccgcc 1581 Query: 421 gcggc 425 ||||| Sbjct: 1582 gcggc 1586 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 504 cgagtcgccgcccgattccggggagc 529 ||||||||| |||||||||||||||| Sbjct: 1644 cgagtcgcctcccgattccggggagc 1669
>emb|AJ234748.1|HVU234748 Hordeum vulgare genomic DNA fragment; clone MWG2067.uni Length = 351 Score = 307 bits (155), Expect = 2e-80 Identities = 171/174 (98%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 1 ccacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtct 60 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 262 ccacgacgtgcgnatcccctaccagcag-aagcgcatgttcgggttcgtcaccttcgtct 204 Query: 61 acccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcg 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 acccgg-agacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcg 145 Query: 121 cgcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 cgcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 91
>dbj|AK102918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114B10, full insert sequence Length = 2381 Score = 281 bits (142), Expect = 1e-72 Identities = 174/182 (95%), Gaps = 2/182 (1%) Strand = Plus / Plus Query: 2 cacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtcta 61 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || Sbjct: 1491 cacgacgtgcgcatcccgtaccagcag-aagcgcatgttcgggttcgtcaccttcgttta 1549 Query: 62 cccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgc 121 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 1550 cccgg-agacggtgaagctgatcttggccaagggcaacccgcacttcatctgcgacgccc 1608 Query: 122 gcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcaggaagcagc 181 ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 1609 gcgtgctcgtcaagccctacaaggagaagggcaaggtccccgacaagtacaggaagcagc 1668 Query: 182 ag 183 || Sbjct: 1669 ag 1670 Score = 151 bits (76), Expect = 3e-33 Identities = 154/180 (85%) Strand = Plus / Plus Query: 229 gacgccagagaccccttcgatctccaccagattggtgcgaggatgctgcagcactccaac 288 |||||||| |||||||| ||| | |||||| | ||||| ||||||||||||||||||||| Sbjct: 1707 gacgccagggacccctttgattttcaccagctcggtgcaaggatgctgcagcactccaac 1766 Query: 289 agcgccaacgagatgctgctgaggaggaagctggaggagcagcagcaggcggtggagctg 348 ||||| |||||| | ||||| || ||||||| ||||||||||| ||||||| ||||||| Sbjct: 1767 agcgcgaacgagctaatgctgcggcggaagctcgaggagcagcaacaggcggcggagctg 1826 Query: 349 cagcaggcgatcgagcttcagagccggcgcctcatggggctgcagatgctcgacctcaag 408 |||||||| || || || || ||||| |||||||| || || ||| |||||||||||||| Sbjct: 1827 cagcaggctattgatctccatagccgccgcctcattggcctccagctgctcgacctcaag 1886
>gb|AY109693.1| Zea mays CL17071_1 mRNA sequence Length = 851 Score = 274 bits (138), Expect = 3e-70 Identities = 173/182 (95%), Gaps = 2/182 (1%) Strand = Plus / Plus Query: 2 cacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtcta 61 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105 cacgacgtgcgcatcccctaccagcag-aagcgcatgttcgggttcgtcaccttcgtcta 163 Query: 62 cccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgc 121 ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 164 cccag-agacggtgaagctcatcctggccaagggcaacccgcacttcatctgcgacgcac 222 Query: 122 gcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcaggaagcagc 181 |||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 223 gcgtgctcgtcaagccgtataaggagaagggcaaggtccccgacaagtacaggaagcagc 282 Query: 182 ag 183 || Sbjct: 283 ag 284 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 222 cgggctggacgccagagaccccttcgatctccaccagattggtgcgaggatgctgcagca 281 ||||||||||||| |||| ||||| ||||| ||||| | || |||||||||||||||| Sbjct: 320 cgggctggacgcccgagatccctttgatctgcaccaactcggctcgaggatgctgcagca 379 Query: 282 ctccaacagcgccaacg 298 || ||||||||||||| Sbjct: 380 ttcgaacagcgccaacg 396 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 361 gagcttcagagccggcgcctcatggggctgcagatgctcgacctcaag 408 ||||| |||||||| ||||||||||| || ||| |||||||||||||| Sbjct: 459 gagctccagagccgccgcctcatgggtctccagctgctcgacctcaag 506
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 264 bits (133), Expect = 3e-67 Identities = 165/173 (95%), Gaps = 2/173 (1%) Strand = Plus / Plus Query: 2 cacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtcta 61 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || Sbjct: 12042961 cacgacgtgcgcatcccgtaccagcag-aagcgcatgttcgggttcgtcaccttcgttta 12043019 Query: 62 cccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgc 121 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 12043020 cccgg-agacggtgaagctgatcttggccaagggcaacccgcacttcatctgcgacgccc 12043078 Query: 122 gcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 ||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 12043079 gcgtgctcgtcaagccctacaaggagaagggcaaggtccccgacaagtacagg 12043131 Score = 232 bits (117), Expect = 1e-57 Identities = 161/173 (93%), Gaps = 2/173 (1%) Strand = Plus / Plus Query: 2 cacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtcta 61 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || Sbjct: 12021674 cacgacgtgcgcatcccgtaccagcag-aagcgcatgttcgggttcgtcaccttcgtgta 12021732 Query: 62 cccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgc 121 ||| | ||||||||||||||||| ||||||||||||| ||||| |||||||||||||| | Sbjct: 12021733 ccctg-agacggtgaagctgatcttggccaagggcaatccgcatttcatctgcgacgccc 12021791 Query: 122 gcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 |||||||||||||||| |||||||||||||| |||||||||||||||| |||| Sbjct: 12021792 gcgtgctcgtcaagccttacaaggagaagggcaaggtccccgacaagtacagg 12021844 Score = 133 bits (67), Expect = 7e-28 Identities = 127/147 (86%) Strand = Plus / Plus Query: 262 ggtgcgaggatgctgcagcactccaacagcgccaacgagatgctgctgaggaggaagctg 321 ||||| |||||||||||||||||||||||||| |||||| | ||||| || ||||||| Sbjct: 12043478 ggtgcaaggatgctgcagcactccaacagcgcgaacgagctaatgctgcggcggaagctc 12043537 Query: 322 gaggagcagcagcaggcggtggagctgcagcaggcgatcgagcttcagagccggcgcctc 381 ||||||||||| ||||||| ||||||||||||||| || || || || ||||| |||||| Sbjct: 12043538 gaggagcagcaacaggcggcggagctgcagcaggctattgatctccatagccgccgcctc 12043597 Query: 382 atggggctgcagatgctcgacctcaag 408 || || || ||| |||||||||||||| Sbjct: 12043598 attggcctccagctgctcgacctcaag 12043624 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 262 ggtgcgaggatgctgcagcactccaacagcgccaacgagatgctgctgaggaggaagctg 321 |||||||||||||||||||||||||| ||| | ||||||||| |||| | ||||| ||| Sbjct: 12022235 ggtgcgaggatgctgcagcactccaatagcacaaacgagatgatgcttcgtaggaaactg 12022294 Query: 322 gaggagcagcagcaggcggtggagctgcagcaggcgatcgagcttcagagccggcgcctc 381 ||||||||||||||||| | |||||||| ||||| ||||| || || || || || ||| Sbjct: 12022295 gaggagcagcagcaggctgccgagctgcaacaggccatcgaactccacagtcgccgtctc 12022354 Query: 382 atggggctgcagatgctcgacctcaaga 409 |||| || ||| ||||||||||||||| Sbjct: 12022355 atggacctccagctgctcgacctcaaga 12022382 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccacc 441 ||||| |||||||||||||||||| Sbjct: 33769595 gccgccgctgccgccgccgccacc 33769618 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 gcggctgccgccgccgccaccgcg 444 |||||||||||||||||| ||||| Sbjct: 22100412 gcggctgccgccgccgccgccgcg 22100389 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 gcggctgccgccgccgccaccgcg 444 |||||||| ||||||||||||||| Sbjct: 7084473 gcggctgcggccgccgccaccgcg 7084450 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgcgccgac 449 ||||||| ||||||||||||||| ||||||| Sbjct: 1207244 gccgcggtggccgccgccgccaccacgccgac 1207213
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 264 bits (133), Expect = 3e-67 Identities = 165/173 (95%), Gaps = 2/173 (1%) Strand = Plus / Plus Query: 2 cacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtcta 61 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || Sbjct: 12039724 cacgacgtgcgcatcccgtaccagcag-aagcgcatgttcgggttcgtcaccttcgttta 12039782 Query: 62 cccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgc 121 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 12039783 cccgg-agacggtgaagctgatcttggccaagggcaacccgcacttcatctgcgacgccc 12039841 Query: 122 gcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 ||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 12039842 gcgtgctcgtcaagccctacaaggagaagggcaaggtccccgacaagtacagg 12039894 Score = 232 bits (117), Expect = 1e-57 Identities = 161/173 (93%), Gaps = 2/173 (1%) Strand = Plus / Plus Query: 2 cacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtcta 61 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || Sbjct: 12018437 cacgacgtgcgcatcccgtaccagcag-aagcgcatgttcgggttcgtcaccttcgtgta 12018495 Query: 62 cccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgc 121 ||| | ||||||||||||||||| ||||||||||||| ||||| |||||||||||||| | Sbjct: 12018496 ccctg-agacggtgaagctgatcttggccaagggcaatccgcatttcatctgcgacgccc 12018554 Query: 122 gcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 |||||||||||||||| |||||||||||||| |||||||||||||||| |||| Sbjct: 12018555 gcgtgctcgtcaagccttacaaggagaagggcaaggtccccgacaagtacagg 12018607 Score = 133 bits (67), Expect = 7e-28 Identities = 127/147 (86%) Strand = Plus / Plus Query: 262 ggtgcgaggatgctgcagcactccaacagcgccaacgagatgctgctgaggaggaagctg 321 ||||| |||||||||||||||||||||||||| |||||| | ||||| || ||||||| Sbjct: 12040241 ggtgcaaggatgctgcagcactccaacagcgcgaacgagctaatgctgcggcggaagctc 12040300 Query: 322 gaggagcagcagcaggcggtggagctgcagcaggcgatcgagcttcagagccggcgcctc 381 ||||||||||| ||||||| ||||||||||||||| || || || || ||||| |||||| Sbjct: 12040301 gaggagcagcaacaggcggcggagctgcagcaggctattgatctccatagccgccgcctc 12040360 Query: 382 atggggctgcagatgctcgacctcaag 408 || || || ||| |||||||||||||| Sbjct: 12040361 attggcctccagctgctcgacctcaag 12040387 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 262 ggtgcgaggatgctgcagcactccaacagcgccaacgagatgctgctgaggaggaagctg 321 |||||||||||||||||||||||||| ||| | ||||||||| |||| | ||||| ||| Sbjct: 12018998 ggtgcgaggatgctgcagcactccaatagcacaaacgagatgatgcttcgtaggaaactg 12019057 Query: 322 gaggagcagcagcaggcggtggagctgcagcaggcgatcgagcttcagagccggcgcctc 381 ||||||||||||||||| | |||||||| ||||| ||||| || || || || || ||| Sbjct: 12019058 gaggagcagcagcaggctgccgagctgcaacaggccatcgaactccacagtcgccgtctc 12019117 Query: 382 atggggctgcagatgctcgacctcaaga 409 |||| || ||| ||||||||||||||| Sbjct: 12019118 atggacctccagctgctcgacctcaaga 12019145 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccacc 441 ||||| |||||||||||||||||| Sbjct: 33860067 gccgccgctgccgccgccgccacc 33860090 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 gcggctgccgccgccgccaccgcg 444 |||||||||||||||||| ||||| Sbjct: 22093441 gcggctgccgccgccgccgccgcg 22093418 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 gcggctgccgccgccgccaccgcg 444 |||||||| ||||||||||||||| Sbjct: 7082368 gcggctgcggccgccgccaccgcg 7082345 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgcgccgac 449 ||||||| ||||||||||||||| ||||||| Sbjct: 1207242 gccgcggtggccgccgccgccaccacgccgac 1207211
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 264 bits (133), Expect = 3e-67 Identities = 165/173 (95%), Gaps = 2/173 (1%) Strand = Plus / Plus Query: 2 cacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtcta 61 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || Sbjct: 63541 cacgacgtgcgcatcccgtaccagcag-aagcgcatgttcgggttcgtcaccttcgttta 63599 Query: 62 cccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgc 121 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 63600 cccgg-agacggtgaagctgatcttggccaagggcaacccgcacttcatctgcgacgccc 63658 Query: 122 gcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 ||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 63659 gcgtgctcgtcaagccctacaaggagaagggcaaggtccccgacaagtacagg 63711 Score = 232 bits (117), Expect = 1e-57 Identities = 161/173 (93%), Gaps = 2/173 (1%) Strand = Plus / Plus Query: 2 cacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtcta 61 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || Sbjct: 42254 cacgacgtgcgcatcccgtaccagcag-aagcgcatgttcgggttcgtcaccttcgtgta 42312 Query: 62 cccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgc 121 ||| | ||||||||||||||||| ||||||||||||| ||||| |||||||||||||| | Sbjct: 42313 ccctg-agacggtgaagctgatcttggccaagggcaatccgcatttcatctgcgacgccc 42371 Query: 122 gcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 |||||||||||||||| |||||||||||||| |||||||||||||||| |||| Sbjct: 42372 gcgtgctcgtcaagccttacaaggagaagggcaaggtccccgacaagtacagg 42424 Score = 133 bits (67), Expect = 7e-28 Identities = 127/147 (86%) Strand = Plus / Plus Query: 262 ggtgcgaggatgctgcagcactccaacagcgccaacgagatgctgctgaggaggaagctg 321 ||||| |||||||||||||||||||||||||| |||||| | ||||| || ||||||| Sbjct: 64058 ggtgcaaggatgctgcagcactccaacagcgcgaacgagctaatgctgcggcggaagctc 64117 Query: 322 gaggagcagcagcaggcggtggagctgcagcaggcgatcgagcttcagagccggcgcctc 381 ||||||||||| ||||||| ||||||||||||||| || || || || ||||| |||||| Sbjct: 64118 gaggagcagcaacaggcggcggagctgcagcaggctattgatctccatagccgccgcctc 64177 Query: 382 atggggctgcagatgctcgacctcaag 408 || || || ||| |||||||||||||| Sbjct: 64178 attggcctccagctgctcgacctcaag 64204 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Plus Query: 262 ggtgcgaggatgctgcagcactccaacagcgccaacgagatgctgctgaggaggaagctg 321 |||||||||||||||||||||||||| ||| | ||||||||| |||| | ||||| ||| Sbjct: 42815 ggtgcgaggatgctgcagcactccaatagcacaaacgagatgatgcttcgtaggaaactg 42874 Query: 322 gaggagcagcagcaggcggtggagctgcagcaggcgatcgagcttcagagccggcgcctc 381 ||||||||||||||||| | |||||||| ||||| ||||| || || || || || ||| Sbjct: 42875 gaggagcagcagcaggctgccgagctgcaacaggccatcgaactccacagtcgccgtctc 42934 Query: 382 atggggctgcagatgctcgacctcaaga 409 |||| || ||| ||||||||||||||| Sbjct: 42935 atggacctccagctgctcgacctcaaga 42962
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 242 bits (122), Expect = 1e-60 Identities = 163/174 (93%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 1 ccacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtct 60 ||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||| Sbjct: 28877570 ccacgacgttcgcatcccgtaccagcag-aagcgcatgttcggcttcgtcaccttcgtct 28877512 Query: 61 acccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcg 120 |||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 28877511 acccgg-agacggtgaagctgattctcgccaagggcaacccgcacttcatctgcgacgcc 28877453 Query: 121 cgcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 ||||||||||||||||| |||||||||||||| |||||||||||||||| |||| Sbjct: 28877452 cgcgtgctcgtcaagccatacaaggagaagggcaaggtccccgacaagtacagg 28877399 Score = 198 bits (100), Expect = 1e-47 Identities = 148/164 (90%) Strand = Plus / Minus Query: 262 ggtgcgaggatgctgcagcactccaacagcgccaacgagatgctgctgaggaggaagctg 321 |||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 28877137 ggtgcgagaatgctgcagcactccaacagcgcgaatgagatgctgctgaggaggaagctg 28877078 Query: 322 gaggagcagcagcaggcggtggagctgcagcaggcgatcgagcttcagagccggcgcctc 381 ||||||||||||||||| | ||||||||||||||||||||||| || ||||| |||||| Sbjct: 28877077 gaggagcagcagcaggccgccgagctgcagcaggcgatcgagctccacagccgccgcctc 28877018 Query: 382 atggggctgcagatgctcgacctcaagacacgctcggccgcggc 425 |||||||||||| |||| ||| ||||| | ||| | |||||||| Sbjct: 28877017 atggggctgcagctgctagacttcaagtcgcgcgccgccgcggc 28876974 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 178 cagcagggcgagagagtggacttctccagctgcgggtctccaaccgggctggacgccaga 237 |||| ||||||||| |||||||||||||||||| ||||||| || || || |||||| Sbjct: 28877306 cagccgggcgagagggtggacttctccagctgcactactccaactggactcgatgccaga 28877247 Query: 238 gaccccttcga 248 ||||||||||| Sbjct: 28877246 gaccccttcga 28877236 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 gaggaggaagctggaggagcag 330 |||||||||||||||||||||| Sbjct: 3066673 gaggaggaagctggaggagcag 3066694
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 242 bits (122), Expect = 1e-60 Identities = 163/174 (93%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 1 ccacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtct 60 ||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||| Sbjct: 135256 ccacgacgttcgcatcccgtaccagcag-aagcgcatgttcggcttcgtcaccttcgtct 135198 Query: 61 acccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcg 120 |||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 135197 acccgg-agacggtgaagctgattctcgccaagggcaacccgcacttcatctgcgacgcc 135139 Query: 121 cgcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 ||||||||||||||||| |||||||||||||| |||||||||||||||| |||| Sbjct: 135138 cgcgtgctcgtcaagccatacaaggagaagggcaaggtccccgacaagtacagg 135085 Score = 198 bits (100), Expect = 1e-47 Identities = 148/164 (90%) Strand = Plus / Minus Query: 262 ggtgcgaggatgctgcagcactccaacagcgccaacgagatgctgctgaggaggaagctg 321 |||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 134823 ggtgcgagaatgctgcagcactccaacagcgcgaatgagatgctgctgaggaggaagctg 134764 Query: 322 gaggagcagcagcaggcggtggagctgcagcaggcgatcgagcttcagagccggcgcctc 381 ||||||||||||||||| | ||||||||||||||||||||||| || ||||| |||||| Sbjct: 134763 gaggagcagcagcaggccgccgagctgcagcaggcgatcgagctccacagccgccgcctc 134704 Query: 382 atggggctgcagatgctcgacctcaagacacgctcggccgcggc 425 |||||||||||| |||| ||| ||||| | ||| | |||||||| Sbjct: 134703 atggggctgcagctgctagacttcaagtcgcgcgccgccgcggc 134660 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 178 cagcagggcgagagagtggacttctccagctgcgggtctccaaccgggctggacgccaga 237 |||| ||||||||| |||||||||||||||||| ||||||| || || || |||||| Sbjct: 134992 cagccgggcgagagggtggacttctccagctgcactactccaactggactcgatgccaga 134933 Query: 238 gaccccttcga 248 ||||||||||| Sbjct: 134932 gaccccttcga 134922
>dbj|AK109592.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-C05, full insert sequence Length = 2719 Score = 242 bits (122), Expect = 1e-60 Identities = 163/174 (93%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 1 ccacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtct 60 ||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||| Sbjct: 937 ccacgacgttcgcatcccgtaccagcag-aagcgcatgttcggcttcgtcaccttcgtct 879 Query: 61 acccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcg 120 |||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 878 acccgg-agacggtgaagctgattctcgccaagggcaacccgcacttcatctgcgacgcc 820 Query: 121 cgcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 ||||||||||||||||| |||||||||||||| |||||||||||||||| |||| Sbjct: 819 cgcgtgctcgtcaagccatacaaggagaagggcaaggtccccgacaagtacagg 766 Score = 198 bits (100), Expect = 1e-47 Identities = 148/164 (90%) Strand = Plus / Minus Query: 262 ggtgcgaggatgctgcagcactccaacagcgccaacgagatgctgctgaggaggaagctg 321 |||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 504 ggtgcgagaatgctgcagcactccaacagcgcgaatgagatgctgctgaggaggaagctg 445 Query: 322 gaggagcagcagcaggcggtggagctgcagcaggcgatcgagcttcagagccggcgcctc 381 ||||||||||||||||| | ||||||||||||||||||||||| || ||||| |||||| Sbjct: 444 gaggagcagcagcaggccgccgagctgcagcaggcgatcgagctccacagccgccgcctc 385 Query: 382 atggggctgcagatgctcgacctcaagacacgctcggccgcggc 425 |||||||||||| |||| ||| ||||| | ||| | |||||||| Sbjct: 384 atggggctgcagctgctagacttcaagtcgcgcgccgccgcggc 341 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 178 cagcagggcgagagagtggacttctccagctgcgggtctccaaccgggctggacgccaga 237 |||| ||||||||| |||||||||||||||||| ||||||| || || || |||||| Sbjct: 673 cagccgggcgagagggtggacttctccagctgcactactccaactggactcgatgccaga 614 Query: 238 gaccccttcga 248 ||||||||||| Sbjct: 613 gaccccttcga 603
>dbj|AK102616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099F01, full insert sequence Length = 2556 Score = 236 bits (119), Expect = 6e-59 Identities = 163/175 (93%), Gaps = 2/175 (1%) Strand = Plus / Plus Query: 2 cacgacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtcta 61 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || Sbjct: 1348 cacgacgtgcgcatcccgtaccagcag-aagcgcatgttcgggttcgtcaccttcgtgta 1406 Query: 62 cccggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgc 121 ||| | ||||||||||||||||| ||||||||||||| ||||| |||||||||||||| | Sbjct: 1407 ccctg-agacggtgaagctgatcttggccaagggcaatccgcatttcatctgcgacgccc 1465 Query: 122 gcgtgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcaggaa 176 |||||||||||||||| |||||||||||||| |||||||||||||||| |||||| Sbjct: 1466 gcgtgctcgtcaagccttacaaggagaagggcaaggtccccgacaagtacaggaa 1520 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Plus Query: 226 ctggacgccagagaccccttcgatctccaccagattggtgcgaggatgctgcagcactcc 285 ||||||| ||||||||| |||||||| || ||| | |||||||||||||||||||||||| Sbjct: 1561 ctggacggcagagacccattcgatctgcatcagctcggtgcgaggatgctgcagcactcc 1620 Query: 286 aacagcgccaacgagatgctgctgaggaggaagctggaggagcagcagcaggcggtggag 345 || ||| | ||||||||| |||| | ||||| |||||||||||||||||||| | ||| Sbjct: 1621 aatagcacaaacgagatgatgcttcgtaggaaactggaggagcagcagcaggctgccgag 1680 Query: 346 ctgcagcaggcgatcgagcttcagagccggcgcctcatggggctgcagatgctcgacctc 405 ||||| ||||| ||||| || || || || || ||||||| || ||| ||||||||||| Sbjct: 1681 ctgcaacaggccatcgaactccacagtcgccgtctcatggacctccagctgctcgacctc 1740 Query: 406 aaga 409 |||| Sbjct: 1741 aaga 1744
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 186 bits (94), Expect = 5e-44 Identities = 153/170 (90%), Gaps = 2/170 (1%) Strand = Plus / Plus Query: 5 gacgtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtctaccc 64 |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| | Sbjct: 52101 gacgtgcgcatcccgtaccagcag-aagcgcatgttcggcttcgtcaccttcgtctacgc 52159 Query: 65 ggnagacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgcgcg 124 | ||||||||||| | ||||| ||||||||||||||||||| | ||||||||||||| Sbjct: 52160 cg-agacggtgaagatcatcctcagcaagggcaacccgcacttcgtgtgcgacgcgcgcg 52218 Query: 125 tgctcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 | ||||||||||| |||||||||||||| ||||||||||||| ||||||| Sbjct: 52219 tcctcgtcaagccttacaaggagaagggcaaggtccccgacaggttcagg 52268 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggagcagcagcaggcggtggagctgcagcaggcgatcgagctt 366 |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| Sbjct: 52672 ctgaggaggaagctggaggagcagcaccaggcggcggagctgcagcaggccatcgagctg 52731 Query: 367 cagagccggcgcctcatggggctgcagatgctcgacctcaaga 409 || | || ||| ||||||||||||| | ||||||||||||| Sbjct: 52732 gaggggcgccgcttcatggggctgcacctcctcgacctcaaga 52774
>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18, complete sequence Length = 150279 Score = 87.7 bits (44), Expect = 4e-14 Identities = 138/167 (82%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 8 gtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtctacccggn 67 ||||| ||||| |||||| || ||||||||||| || || |||||||||| ||||| Sbjct: 66745 gtgcgtatcccataccaggag-aagcgcatgtttggttttgtcaccttcgcctaccaa-a 66688 Query: 68 agacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgcgcgtgc 127 |||| |||||||| || || |||||||||||||| || | |||||| || || || || | Sbjct: 66687 agacagtgaagctaattcttgccaagggcaacccacattacatctgtgatgcacgtgttc 66628 Query: 128 tcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 | |||||||| ||||||||||||| ||||||||| ||||||||||| Sbjct: 66627 ttgtcaagccatacaaggagaaggacaaggtccccaacaagttcagg 66581
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 87.7 bits (44), Expect = 4e-14 Identities = 138/167 (82%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 8 gtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtctacccggn 67 ||||| ||||| |||||| || ||| ||||||| || ||||||||||||| ||||| Sbjct: 1099528 gtgcgtatcccataccaggag-aagtgcatgtttggtttcgtcaccttcgcctaccaa-a 1099471 Query: 68 agacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgcgcgtgc 127 |||| |||||||| || || |||||||||||||| || | |||||| || || || || | Sbjct: 1099470 agacagtgaagctaattcttgccaagggcaacccacattacatctgtgatgcacgtgttc 1099411 Query: 128 tcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 | |||||||| ||||||||||||| ||||||||| ||||||||||| Sbjct: 1099410 ttgtcaagccatacaaggagaaggacaaggtccccaacaagttcagg 1099364 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccg 442 |||||||||||||||||||| Sbjct: 18930252 ggctgccgccgccgccaccg 18930271
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 87.7 bits (44), Expect = 4e-14 Identities = 138/167 (82%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 8 gtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtctacccggn 67 ||||| ||||| |||||| || ||||||||||| || || |||||||||| ||||| Sbjct: 1170939 gtgcgtatcccataccaggag-aagcgcatgtttggttttgtcaccttcgcctaccaa-a 1170882 Query: 68 agacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgcgcgtgc 127 |||| |||||||| || || |||||||||||||| || | |||||| || || || || | Sbjct: 1170881 agacagtgaagctaattcttgccaagggcaacccacattacatctgtgatgcacgtgttc 1170822 Query: 128 tcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 | |||||||| ||||||||||||| ||||||||| ||||||||||| Sbjct: 1170821 ttgtcaagccatacaaggagaaggacaaggtccccaacaagttcagg 1170775 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccg 442 |||||||| |||||||||||||||| Sbjct: 24396817 gccgcggccgccgccgccgccaccg 24396841 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gctgctgaggaggaagctgg 322 |||||||||||||||||||| Sbjct: 24606907 gctgctgaggaggaagctgg 24606926 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 ggggagcaaggcactggctgcggc 546 ||||||||||||| |||||||||| Sbjct: 16590029 ggggagcaaggcagtggctgcggc 16590006 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ccgcggctgccgccgccgcc 438 |||||||||||||||||||| Sbjct: 13473388 ccgcggctgccgccgccgcc 13473369 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggaggagcagcagcaggcgg 340 |||||||||||||||||||| Sbjct: 2821686 ggaggagcagcagcaggcgg 2821667
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 87.7 bits (44), Expect = 4e-14 Identities = 138/167 (82%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 8 gtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtctacccggn 67 ||||| ||||| |||||| || ||||||||||| || || |||||||||| ||||| Sbjct: 1168660 gtgcgtatcccataccaggag-aagcgcatgtttggttttgtcaccttcgcctaccaa-a 1168603 Query: 68 agacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgcgcgtgc 127 |||| |||||||| || || |||||||||||||| || | |||||| || || || || | Sbjct: 1168602 agacagtgaagctaattcttgccaagggcaacccacattacatctgtgatgcacgtgttc 1168543 Query: 128 tcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 | |||||||| ||||||||||||| ||||||||| ||||||||||| Sbjct: 1168542 ttgtcaagccatacaaggagaaggacaaggtccccaacaagttcagg 1168496 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccg 442 |||||||| |||||||||||||||| Sbjct: 24708486 gccgcggccgccgccgccgccaccg 24708510 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gctgctgaggaggaagctgg 322 |||||||||||||||||||| Sbjct: 24918577 gctgctgaggaggaagctgg 24918596 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 ggggagcaaggcactggctgcggc 546 ||||||||||||| |||||||||| Sbjct: 16680297 ggggagcaaggcagtggctgcggc 16680274 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ccgcggctgccgccgccgcc 438 |||||||||||||||||||| Sbjct: 13553567 ccgcggctgccgccgccgcc 13553548 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggaggagcagcagcaggcgg 340 |||||||||||||||||||| Sbjct: 2830717 ggaggagcagcagcaggcgg 2830698
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 87.7 bits (44), Expect = 4e-14 Identities = 138/167 (82%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 8 gtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtctacccggn 67 ||||| ||||| |||||| || ||| ||||||| || ||||||||||||| ||||| Sbjct: 1099528 gtgcgtatcccataccaggag-aagtgcatgtttggtttcgtcaccttcgcctaccaa-a 1099471 Query: 68 agacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgcgcgtgc 127 |||| |||||||| || || |||||||||||||| || | |||||| || || || || | Sbjct: 1099470 agacagtgaagctaattcttgccaagggcaacccacattacatctgtgatgcacgtgttc 1099411 Query: 128 tcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 | |||||||| ||||||||||||| ||||||||| ||||||||||| Sbjct: 1099410 ttgtcaagccatacaaggagaaggacaaggtccccaacaagttcagg 1099364 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccg 442 |||||||||||||||||||| Sbjct: 18856479 ggctgccgccgccgccaccg 18856498
>emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311_G04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 97056 Score = 87.7 bits (44), Expect = 4e-14 Identities = 138/167 (82%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 8 gtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtctacccggn 67 ||||| ||||| |||||| || ||| ||||||| || ||||||||||||| ||||| Sbjct: 94800 gtgcgtatcccataccaggag-aagtgcatgtttggtttcgtcaccttcgcctaccaa-a 94743 Query: 68 agacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgcgcgtgc 127 |||| |||||||| || || |||||||||||||| || | |||||| || || || || | Sbjct: 94742 agacagtgaagctaattcttgccaagggcaacccacattacatctgtgatgcacgtgttc 94683 Query: 128 tcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 | |||||||| ||||||||||||| ||||||||| ||||||||||| Sbjct: 94682 ttgtcaagccatacaaggagaaggacaaggtccccaacaagttcagg 94636
>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126974 Score = 87.7 bits (44), Expect = 4e-14 Identities = 138/167 (82%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 8 gtgcgcatcccctaccagcagnaagcgcatgttcgggttcgtcaccttcgtctacccggn 67 ||||| ||||| |||||| || ||| ||||||| || ||||||||||||| ||||| Sbjct: 38511 gtgcgtatcccataccaggag-aagtgcatgtttggtttcgtcaccttcgcctaccaa-a 38454 Query: 68 agacggtgaagctgatcctggccaagggcaacccgcacttcatctgcgacgcgcgcgtgc 127 |||| |||||||| || || |||||||||||||| || | |||||| || || || || | Sbjct: 38453 agacagtgaagctaattcttgccaagggcaacccacattacatctgtgatgcacgtgttc 38394 Query: 128 tcgtcaagccctacaaggagaagggaaaggtccccgacaagttcagg 174 | |||||||| ||||||||||||| ||||||||| ||||||||||| Sbjct: 38393 ttgtcaagccatacaaggagaaggacaaggtccccaacaagttcagg 38347
>ref|XM_479898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2471 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 95 gcaacccgcacttcatctgcgacgcgcgcgtgctcgtcaagccctacaaggagaa 149 |||||||||| |||||||||| |||| || |||||||||||||||| |||||| Sbjct: 1305 gcaacccgcatttcatctgcggatcgcgggttctcgtcaagccctacagggagaa 1359 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 gcgcatgttcgggttcgtcaccttc 56 |||||||||||||||||||| |||| Sbjct: 1243 gcgcatgttcgggttcgtcagcttc 1267
>ref|XM_507108.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1163_G08.18 mRNA Length = 2651 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 95 gcaacccgcacttcatctgcgacgcgcgcgtgctcgtcaagccctacaaggagaa 149 |||||||||| |||||||||| |||| || |||||||||||||||| |||||| Sbjct: 1397 gcaacccgcatttcatctgcggatcgcgggttctcgtcaagccctacagggagaa 1451 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 gcgcatgttcgggttcgtcaccttc 56 |||||||||||||||||||| |||| Sbjct: 1335 gcgcatgttcgggttcgtcagcttc 1359
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 95 gcaacccgcacttcatctgcgacgcgcgcgtgctcgtcaagccctacaaggagaa 149 |||||||||| |||||||||| |||| || |||||||||||||||| |||||| Sbjct: 1532105 gcaacccgcatttcatctgcggatcgcgggttctcgtcaagccctacagggagaa 1532159 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 417 ggccgcggctgccgccgccgcc 438 |||||||||||||||||||||| Sbjct: 26880183 ggccgcggctgccgccgccgcc 26880204 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 gcgcatgttcgggttcgtcaccttc 56 |||||||||||||||||||| |||| Sbjct: 1532043 gcgcatgttcgggttcgtcagcttc 1532067 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccacc 441 |||||||| ||||||||||||||| Sbjct: 27390928 gccgcggcggccgccgccgccacc 27390905 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccacc 441 |||||||| ||||||||||||||| Sbjct: 23347036 gccgcggcggccgccgccgccacc 23347013 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 gccgccgccgccaccgcgcc 446 |||||||||||||||||||| Sbjct: 4279566 gccgccgccgccaccgcgcc 4279585
>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1163_G08 Length = 150676 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 95 gcaacccgcacttcatctgcgacgcgcgcgtgctcgtcaagccctacaaggagaa 149 |||||||||| |||||||||| |||| || |||||||||||||||| |||||| Sbjct: 59593 gcaacccgcatttcatctgcggatcgcgggttctcgtcaagccctacagggagaa 59647 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 gcgcatgttcgggttcgtcaccttc 56 |||||||||||||||||||| |||| Sbjct: 59531 gcgcatgttcgggttcgtcagcttc 59555
>dbj|AK111902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082B02, full insert sequence Length = 2650 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 95 gcaacccgcacttcatctgcgacgcgcgcgtgctcgtcaagccctacaaggagaa 149 |||||||||| |||||||||| |||| || |||||||||||||||| |||||| Sbjct: 1397 gcaacccgcatttcatctgcggatcgcgggttctcgtcaagccctacagggagaa 1451 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 gcgcatgttcgggttcgtcaccttc 56 |||||||||||||||||||| |||| Sbjct: 1335 gcgcatgttcgggttcgtcagcttc 1359
>dbj|AK111805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094C18, full insert sequence Length = 2471 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 95 gcaacccgcacttcatctgcgacgcgcgcgtgctcgtcaagccctacaaggagaa 149 |||||||||| |||||||||| |||| || |||||||||||||||| |||||| Sbjct: 1305 gcaacccgcatttcatctgcggatcgcgggttctcgtcaagccctacagggagaa 1359 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 gcgcatgttcgggttcgtcaccttc 56 |||||||||||||||||||| |||| Sbjct: 1243 gcgcatgttcgggttcgtcagcttc 1267
>ref|XM_509640.1| PREDICTED: Pan troglodytes similar to Forkhead box protein O1A (Forkhead in rhabdomyosarcoma) (LOC452551), mRNA Length = 1365 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgc 443 |||||||||| ||||||||||||||||| Sbjct: 937 cggccgcggcggccgccgccgccaccgc 910
>gb|AC119947.14| Mus musculus chromosome 19, clone RP24-446G1, complete sequence Length = 142066 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgc 443 ||||||| |||||||||||||||||||| Sbjct: 28609 cggccgccgctgccgccgccgccaccgc 28582
>emb|CR732082.2|CNS0GRTJ Tetraodon nigroviridis full-length cDNA Length = 1040 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 321 ggaggagcagcagcaggcggtggagctgcagcaggc 356 |||| |||||||||||||| ||| |||||||||||| Sbjct: 136 ggagcagcagcagcaggcgctggcgctgcagcaggc 171
>ref|NM_002015.2| Homo sapiens forkhead box O1A (rhabdomyosarcoma) (FOXO1A), mRNA Length = 5723 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgc 443 |||||||||| ||||||||||||||||| Sbjct: 689 cggccgcggcggccgccgccgccaccgc 662
>emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on chromosome 13 Contains a ring finger protein 12 (RNF12) pseudogene, the 5' end of the FOXO1A gene for forkhead box O1A (rhabdomyosarcoma), the 3' end of the MRPS31 gene for mitochondrial ribosomal protein S31 and a CpG island, complete sequence Length = 151261 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 416 cggccgcggctgccgccgccgccaccgc 443 |||||||||| ||||||||||||||||| Sbjct: 60586 cggccgcggcggccgccgccgccaccgc 60613
>gb|BT007455.1| Homo sapiens forkhead box O1A (rhabdomyosarcoma) mRNA, complete cds Length = 1968 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgc 443 |||||||||| ||||||||||||||||| Sbjct: 304 cggccgcggcggccgccgccgccaccgc 277
>gb|BC070065.1| Homo sapiens forkhead box O1A (rhabdomyosarcoma), mRNA (cDNA clone IMAGE:30345006), partial cds Length = 2482 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgc 443 |||||||||| ||||||||||||||||| Sbjct: 680 cggccgcggcggccgccgccgccaccgc 653
>gb|BC021981.2| Homo sapiens forkhead box O1A (rhabdomyosarcoma), mRNA (cDNA clone MGC:1750 IMAGE:2959021), complete cds Length = 2413 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgc 443 |||||||||| ||||||||||||||||| Sbjct: 617 cggccgcggcggccgccgccgccaccgc 590
>dbj|AK142777.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930008M11 product:RIKEN cDNA A630025O09 gene, full insert sequence Length = 4585 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 416 cggccgcggctgccgccgccgccaccgc 443 ||||||| |||||||||||||||||||| Sbjct: 92 cggccgccgctgccgccgccgccaccgc 119
>dbj|AK041629.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630025O09 product:hypothetical protein, full insert sequence Length = 4492 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 416 cggccgcggctgccgccgccgccaccgc 443 ||||||| |||||||||||||||||||| Sbjct: 63 cggccgccgctgccgccgccgccaccgc 90
>dbj|AK043646.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830015D01 product:hypothetical protein, full insert sequence Length = 1116 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 416 cggccgcggctgccgccgccgccaccgc 443 ||||||| |||||||||||||||||||| Sbjct: 53 cggccgccgctgccgccgccgccaccgc 80
>gb|AY890174.1| Synthetic construct Homo sapiens clone FLH015809.01X forkhead box O1A (FOXO1A) mRNA, complete cds Length = 1968 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgc 443 |||||||||| ||||||||||||||||| Sbjct: 304 cggccgcggcggccgccgccgccaccgc 277
>gb|AY890173.1| Synthetic construct Homo sapiens clone FLH015808.01X forkhead box O1A (FOXO1A) mRNA, complete cds Length = 1968 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgc 443 |||||||||| ||||||||||||||||| Sbjct: 304 cggccgcggcggccgccgccgccaccgc 277
>gb|AF032885.1|AF032885 Homo sapiens forkhead protein (FKHR) mRNA, complete cds Length = 5723 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgc 443 |||||||||| ||||||||||||||||| Sbjct: 689 cggccgcggcggccgccgccgccaccgc 662
>gb|U02310.1|HSU02310 Human fork head domain protein (FKHR) mRNA, complete cds Length = 3421 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgc 443 |||||||||| ||||||||||||||||| Sbjct: 310 cggccgcggcggccgccgccgccaccgc 283
>ref|NM_005994.3| Homo sapiens T-box 2 (TBX2), mRNA Length = 3396 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgcg 444 ||||||||| ||||||||||||||| ||||| Sbjct: 497 ctcggccgctgctgccgccgccgccgccgcg 467
>gb|BC052566.1| Homo sapiens T-box 2, mRNA (cDNA clone MGC:59687 IMAGE:6339405), complete cds Length = 3059 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgcg 444 ||||||||| ||||||||||||||| ||||| Sbjct: 497 ctcggccgctgctgccgccgccgccgccgcg 467
>ref|XM_613036.2| PREDICTED: Bos taurus similar to Transcription factor Sp3 (SPR-2) (LOC540766), mRNA Length = 4926 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 417 ggccgcggctgccgccgccgccaccgcgccg 447 |||||| || ||||||||||||||||||||| Sbjct: 279 ggccgccgccgccgccgccgccaccgcgccg 249
>ref|NM_026988.1| Mus musculus RIKEN cDNA 2610009E16 gene (2610009E16Rik), mRNA Length = 1184 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 424 gctgccgccgccgccaccgcgcc 446 ||||||||||||||||||||||| Sbjct: 215 gctgccgccgccgccaccgcgcc 237
>gb|AC137901.7| Mus musculus chromosome 6, clone RP23-81E17, complete sequence Length = 158419 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 424 gctgccgccgccgccaccgcgcc 446 ||||||||||||||||||||||| Sbjct: 32448 gctgccgccgccgccaccgcgcc 32470
>emb|CR692238.1|CNS0FX2Y Tetraodon nigroviridis full-length cDNA Length = 1817 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 ggaggagcagcagcaggcggtgg 343 ||||||||||||||||||||||| Sbjct: 535 ggaggagcagcagcaggcggtgg 513
>gb|AC164563.4| Mus musculus BAC clone RP23-130D15 from chromosome 6, complete sequence Length = 202948 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 424 gctgccgccgccgccaccgcgcc 446 ||||||||||||||||||||||| Sbjct: 93980 gctgccgccgccgccaccgcgcc 93958
>gb|BC070054.1| Homo sapiens T-box 2, mRNA (cDNA clone IMAGE:30347457) Length = 3360 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgcg 444 ||||||||| ||||||||||||||| ||||| Sbjct: 484 ctcggccgctgctgccgccgccgccgccgcg 454
>emb|AL832900.1|HSM804211 Homo sapiens mRNA; cDNA DKFZp762H2012 (from clone DKFZp762H2012) Length = 2590 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgcg 444 ||||||||| ||||||||||||||| ||||| Sbjct: 37 ctcggccgctgctgccgccgccgccgccgcg 7
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 415 tcggccgcggctgccgccgccgccacc 441 |||||||| |||||||||||||||||| Sbjct: 45525 tcggccgccgctgccgccgccgccacc 45499
>gb|U28049.1|HSU28049 Human TBX2 (TXB2) mRNA, complete cds Length = 2279 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgcg 444 ||||||||| ||||||||||||||| ||||| Sbjct: 233 ctcggccgctgctgccgccgccgccgccgcg 203
>dbj|AK011360.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610009E16 product:PARATHYMOSIN (ZINC-BINDING 11.5 KDA PROTEIN) homolog [Rattus norvegicus], full insert sequence Length = 1148 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 424 gctgccgccgccgccaccgcgcc 446 ||||||||||||||||||||||| Sbjct: 230 gctgccgccgccgccaccgcgcc 252
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 415 tcggccgcggctgccgccgccgccacc 441 |||||||| |||||||||||||||||| Sbjct: 3612684 tcggccgccgctgccgccgccgccacc 3612658 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgc 437 |||||||||||||||||||| Sbjct: 19456000 gccgcggctgccgccgccgc 19455981 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 ccgcggctgccgccgccgccaccg 442 |||| ||||||||||||||||||| Sbjct: 14596294 ccgccgctgccgccgccgccaccg 14596317 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 gctgccgccgccgccaccgc 443 |||||||||||||||||||| Sbjct: 2251813 gctgccgccgccgccaccgc 2251794
>gb|BC052699.1| Mus musculus RIKEN cDNA 2610009E16 gene, mRNA (cDNA clone MGC:64697 IMAGE:5715702), complete cds Length = 1184 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 424 gctgccgccgccgccaccgcgcc 446 ||||||||||||||||||||||| Sbjct: 215 gctgccgccgccgccaccgcgcc 237
>emb|AJ339418.1|HSA339418 Homo sapiens genomic sequence surrounding NotI site, clone NL4-AA23C Length = 626 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgcg 444 ||||||||| ||||||||||||||| ||||| Sbjct: 36 ctcggccgctgctgccgccgccgccgccgcg 6
>emb|AJ339370.1|HSA339370 Homo sapiens genomic sequence surrounding NotI site, clone NL4-AN6C Length = 564 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgcg 444 ||||||||| ||||||||||||||| ||||| Sbjct: 36 ctcggccgctgctgccgccgccgccgccgcg 6
>emb|AJ334959.1|HSA334959 Homo sapiens genomic sequence surrounding NotI site, clone NB1-087C Length = 810 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgcg 444 ||||||||| ||||||||||||||| ||||| Sbjct: 36 ctcggccgctgctgccgccgccgccgccgcg 6
>emb|AJ341965.1|HSA341965 Homo sapiens genomic sequence surrounding NotI site, clone NL4-CB9R Length = 729 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgcg 444 ||||||||| ||||||||||||||| ||||| Sbjct: 36 ctcggccgctgctgccgccgccgccgccgcg 6
>emb|X64053.1|RNZNBPA R.norvegicus ZnBP gene for zinc binding protein Length = 6301 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 424 gctgccgccgccgccaccgcgcc 446 ||||||||||||||||||||||| Sbjct: 1870 gctgccgccgccgccaccgcgcc 1892
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 415 tcggccgcggctgccgccgccgc 437 ||||||||||||||||||||||| Sbjct: 357077 tcggccgcggctgccgccgccgc 357099
>gb|AC005746.1|AC005746 Homo sapiens chromosome 17, clone hRPK.332_H_18, complete sequence Length = 189356 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 ctcggccgcggctgccgccgccgccaccgcg 444 ||||||||| ||||||||||||||| ||||| Sbjct: 14540 ctcggccgctgctgccgccgccgccgccgcg 14570
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 415 tcggccgcggctgccgccgccgccacc 441 |||||||| |||||||||||||||||| Sbjct: 3612605 tcggccgccgctgccgccgccgccacc 3612579 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgc 437 |||||||||||||||||||| Sbjct: 19467276 gccgcggctgccgccgccgc 19467257 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 ccgcggctgccgccgccgccaccg 442 |||| ||||||||||||||||||| Sbjct: 14604535 ccgccgctgccgccgccgccaccg 14604558 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 gctgccgccgccgccaccgc 443 |||||||||||||||||||| Sbjct: 2251764 gctgccgccgccgccaccgc 2251745
>gb|AC142254.4| Mus musculus BAC clone RP24-545G7 from 6, complete sequence Length = 159818 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 424 gctgccgccgccgccaccgcgcc 446 ||||||||||||||||||||||| Sbjct: 16327 gctgccgccgccgccaccgcgcc 16349
>gb|AY740084.1| Ostreococcus tauri CRY DASH-like protein gene, complete cds Length = 1641 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgcgcc 446 |||||||||| |||||||||||| ||||||| Sbjct: 1562 cggccgcggccgccgccgccgccgccgcgcc 1532
>emb|AJ342204.1|HSA342204 Homo sapiens genomic sequence surrounding NotI site, clone NL4-DA20C Length = 685 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgcg 444 ||||||||| ||||||||||||||| ||||| Sbjct: 36 ctcggccgctgctgccgccgccgccgccgcg 6
>gb|AC113538.14| Mus musculus chromosome 8, clone RP23-118F24, complete sequence Length = 206380 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 |||||||||||||| ||||||||||| Sbjct: 110770 gccgcggctgccgctgccgccaccgc 110745
>gb|AC102525.8| Mus musculus chromosome 8, clone RP24-133K20, complete sequence Length = 162463 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 |||||||||||||| ||||||||||| Sbjct: 154743 gccgcggctgccgctgccgccaccgc 154718
>ref|NM_192852.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 427 gccgccgccgccaccgcgccga 448 |||||||||||||||||||||| Sbjct: 588 gccgccgccgccaccgcgccga 567
>ref|XM_516180.1| PREDICTED: Pan troglodytes similar to MLPH protein (LOC460048), mRNA Length = 2490 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggagc 328 |||||||||||||||||||||| Sbjct: 1454 ctgaggaggaagctggaggagc 1475
>ref|NM_024101.4| Homo sapiens melanophilin (MLPH), mRNA Length = 2403 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggagc 328 |||||||||||||||||||||| Sbjct: 1328 ctgaggaggaagctggaggagc 1349
>ref|XM_525905.1| PREDICTED: Pan troglodytes similar to Inhibin beta B chain precursor (Activin beta-B chain) (LOC470524), mRNA Length = 2520 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 422 cggctgccgccgccgccaccgc 443 |||||||||||||||||||||| Sbjct: 1364 cggctgccgccgccgccaccgc 1385
>gb|AC134411.7| Mus musculus chromosome 5, clone RP24-369N6, complete sequence Length = 150310 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 59871 gccgctgctgccgccgccgccaccgc 59846
>ref|NM_009233.1| Mus musculus SRY-box containing gene 1 (Sox1), mRNA Length = 1176 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 |||||||||||||| ||||||||||| Sbjct: 911 gccgcggctgccgctgccgccaccgc 886
>gb|BC001653.2| Homo sapiens melanophilin, mRNA (cDNA clone MGC:2771 IMAGE:2958853), complete cds Length = 2403 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggagc 328 |||||||||||||||||||||| Sbjct: 1328 ctgaggaggaagctggaggagc 1349
>gb|BC054533.1| Mus musculus protein kinase, cAMP dependent, catalytic, beta, mRNA (cDNA clone MGC:62278 IMAGE:5704796), complete cds Length = 4348 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 7 gccgccgctgccgccgccgccaccgc 32
>ref|NM_011141.1| Mus musculus POU domain, class 3, transcription factor 1 (Pou3f1), mRNA Length = 1517 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 412 cgctcggccgcggctgccgccgccgc 437 ||||||||||| |||||||||||||| Sbjct: 164 cgctcggccgccgctgccgccgccgc 139
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccgc 443 |||||||||||||| ||||||||||| Sbjct: 137169 gccgcggctgccgctgccgccaccgc 137194
>gb|AC109151.9| Mus musculus chromosome 1, clone RP24-530O9, complete sequence Length = 130025 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 321 ggaggagcagcagcaggcggtggagctgcagcag 354 |||| |||||||||||| || ||||||||||||| Sbjct: 92822 ggagcagcagcagcaggaggaggagctgcagcag 92855
>gb|BC066111.1| Mus musculus carbonic anhydrase 10, mRNA (cDNA clone MGC:90026 IMAGE:30360743), complete cds Length = 2767 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccgcg 444 |||||||||||||||||||||| Sbjct: 552 ggctgccgccgccgccaccgcg 573
>ref|XM_862325.1| PREDICTED: Canis familiaris similar to Rho-GTPase-activating protein 4 (Rho-GAP hematopoietic protein C1) (p115), transcript variant 2 (LOC492245), mRNA Length = 3090 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 553 gccgccgctgccgccgccgccaccgc 578
>ref|XM_549365.2| PREDICTED: Canis familiaris similar to Rho-GTPase-activating protein 4 (Rho-GAP hematopoietic protein C1) (p115), transcript variant 1 (LOC492245), mRNA Length = 3066 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 553 gccgccgctgccgccgccgccaccgc 578
>gb|BT025212.1| Drosophila melanogaster FI01101 full insert cDNA Length = 5253 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 326 agcagcagcaggcggtggagctgcagcagg 355 ||||||| |||||||||| ||||||||||| Sbjct: 2851 agcagcaacaggcggtggtgctgcagcagg 2880
>ref|XM_852941.1| PREDICTED: Canis familiaris similar to coated vesicle membrane protein, transcript variant 4 (LOC486246), mRNA Length = 2894 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 54 gccgccgctgccgccgccgccaccgc 29
>ref|XM_852900.1| PREDICTED: Canis familiaris similar to coated vesicle membrane protein, transcript variant 3 (LOC486246), mRNA Length = 2107 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 54 gccgccgctgccgccgccgccaccgc 29
>ref|XM_852856.1| PREDICTED: Canis familiaris similar to coated vesicle membrane protein, transcript variant 2 (LOC486246), mRNA Length = 2086 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 54 gccgccgctgccgccgccgccaccgc 29
>emb|CR955008.2| Medicago truncatula chromosome 5 clone mte1-51b2, COMPLETE SEQUENCE Length = 110446 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 136 ccctacaaggagaagggaaaggtccccgacaagt 169 |||||||||||||||||||| || || ||||||| Sbjct: 105289 ccctacaaggagaagggaaaagttcctgacaagt 105256
>gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, complete sequence Length = 219825 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 412 cgctcggccgcggctgccgccgccgc 437 ||||||||||| |||||||||||||| Sbjct: 113842 cgctcggccgccgctgccgccgccgc 113867
>gb|BC051269.1| Homo sapiens melanophilin, mRNA (cDNA clone MGC:59733 IMAGE:4862487), complete cds Length = 2331 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggagc 328 |||||||||||||||||||||| Sbjct: 1254 ctgaggaggaagctggaggagc 1275
>gb|AY358857.1| Homo sapiens clone DNA179659 DRLV8200 (UNQ8200) mRNA, complete cds Length = 2201 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggagc 328 |||||||||||||||||||||| Sbjct: 1134 ctgaggaggaagctggaggagc 1155
>gb|AC012085.4| Homo sapiens 12 BAC RP11-887P2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170269 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgc 443 |||||||||||| |||||||||||| |||| Sbjct: 12147 ctcggccgcggccgccgccgccgcctccgc 12118
>gb|AF539748.1| Mus musculus protein inhibitor of activated STAT X (Piasx) gene, promoter region and partial cds Length = 4388 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgcgccgac 449 ||||||| || |||||||||||| |||||||||| Sbjct: 4251 cggccgccgccgccgccgccgccgccgcgccgac 4218
>emb|AL353719.10| Human DNA sequence from clone RP11-85A1 on chromosome 10 Contains the NKX2-3 gene for NK2 transcription factor related, locus 3 (Drosophila), the gene for putative mitochondrial solute carrier (MRS3/4) and five CpG islands, complete sequence Length = 123160 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 414 ctcggccgcggctgccgccgccgccaccgc 443 |||||||||||| |||||||||||| |||| Sbjct: 7055 ctcggccgcggccgccgccgccgccgccgc 7084
>gb|AC158931.4| Mus musculus chromosome 1, clone RP23-3H19, complete sequence Length = 212994 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 321 ggaggagcagcagcaggcggtggagctgcagcag 354 |||| |||||||||||| || ||||||||||||| Sbjct: 199494 ggagcagcagcagcaggaggaggagctgcagcag 199527
>gb|AY150500.1| Arabidopsis thaliana unknown protein (At3g51950) mRNA, complete cds Length = 1654 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 130 gtcaagccctacaaggagaagggaaaggtccccgacaa 167 |||||||||||||||||||| || || ||||| ||||| Sbjct: 982 gtcaagccctacaaggagaaaggcaaagtccctgacaa 1019
>emb|X94126.1|MMSOX1 M.musculus SOX1 gene Length = 2376 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 |||||||||||||| ||||||||||| Sbjct: 1346 gccgcggctgccgctgccgccaccgc 1321
>emb|X57482.1|MMOCT6R M.musculus Oct-6 mRNA for octamer binding protein Length = 1504 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 412 cgctcggccgcggctgccgccgccgc 437 ||||||||||| |||||||||||||| Sbjct: 129 cgctcggccgccgctgccgccgccgc 104
>emb|X56959.1|MDSCIP Mouse SCIP mRNA for a POU-domain transcription factor Length = 1516 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 412 cgctcggccgcggctgccgccgccgc 437 ||||||||||| |||||||||||||| Sbjct: 145 cgctcggccgccgctgccgccgccgc 120
>emb|X54628.1|MMOCT6GR M. musculus oct6 gene for the octamer binding factor oct6 Length = 1517 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 412 cgctcggccgcggctgccgccgccgc 437 ||||||||||| |||||||||||||| Sbjct: 164 cgctcggccgccgctgccgccgccgc 139
>gb|BC070039.1| Homo sapiens suppressor of cytokine signaling 2, mRNA (cDNA clone IMAGE:30346134) Length = 3741 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgc 443 |||||||||||| |||||||||||| |||| Sbjct: 205 ctcggccgcggccgccgccgccgcctccgc 176
>emb|AL713960.17| Mouse DNA sequence from clone RP23-448I9 on chromosome 11 Contains the 5' end of the Car10 gene for carbonic anhydrase 10 and one CpG island, complete sequence Length = 203449 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccgcg 444 |||||||||||||||||||||| Sbjct: 153529 ggctgccgccgccgccaccgcg 153550
>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06, complete sequence Length = 160129 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||||||| |||||||||||||||| Sbjct: 84237 gccgcggctaccgccgccgccaccgc 84262
>emb|CR857875.1| Pongo pygmaeus mRNA; cDNA DKFZp459A1838 (from clone DKFZp459A1838) Length = 2142 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 301 gccgctgctgccgccgccgccaccgc 326
>gb|AC115889.13| Mus musculus chromosome 3, clone RP24-409N2, complete sequence Length = 166218 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 58969 gccgccgctgccgccgccgccaccgc 58944
>gb|AC010066.9| Drosophila melanogaster 3L BAC RPCI98-25O1 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 176056 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 ggaggagcagcagcaggcggtg 342 |||||||||||||||||||||| Sbjct: 125197 ggaggagcagcagcaggcggtg 125176
>gb|AC093454.3| Drosophila melanogaster 3L BAC RP98-23K2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168479 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 ggaggagcagcagcaggcggtg 342 |||||||||||||||||||||| Sbjct: 145146 ggaggagcagcagcaggcggtg 145167
>gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182635 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 326 agcagcagcaggcggtggagctgcagcagg 355 ||||||| |||||||||| ||||||||||| Sbjct: 130725 agcagcaacaggcggtggtgctgcagcagg 130754
>ref|NM_011100.3| Mus musculus protein kinase, cAMP dependent, catalytic, beta (Prkacb), mRNA Length = 4348 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 7 gccgccgctgccgccgccgccaccgc 32
>dbj|AK094168.1| Homo sapiens cDNA FLJ36849 fis, clone ASTRO2014135, weakly similar to Mus musculus mRNA for granuphilin-b Length = 2171 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggagc 328 |||||||||||||||||||||| Sbjct: 1117 ctgaggaggaagctggaggagc 1138
>dbj|AK056867.1| Homo sapiens cDNA FLJ32305 fis, clone PROST2002682 Length = 2341 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggagc 328 |||||||||||||||||||||| Sbjct: 1446 ctgaggaggaagctggaggagc 1467
>emb|CR597608.1| full-length cDNA clone CS0DN003YG22 of Adult brain of Homo sapiens (human) Length = 1447 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggagc 328 |||||||||||||||||||||| Sbjct: 433 ctgaggaggaagctggaggagc 454
>dbj|AK022207.1| Homo sapiens cDNA FLJ12145 fis, clone MAMMA1000395 Length = 2323 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggagc 328 |||||||||||||||||||||| Sbjct: 1280 ctgaggaggaagctggaggagc 1301
>ref|NM_206382.1| Drosophila melanogaster CG5151-RB, transcript variant B (CG5151), mRNA Length = 3066 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 ggaggagcagcagcaggcggtg 342 |||||||||||||||||||||| Sbjct: 922 ggaggagcagcagcaggcggtg 943
>ref|NM_143765.2| Drosophila melanogaster mei-P26 CG12218-RA (mei-P26), mRNA Length = 5253 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 326 agcagcagcaggcggtggagctgcagcagg 355 ||||||| |||||||||| ||||||||||| Sbjct: 2851 agcagcaacaggcggtggtgctgcagcagg 2880
>ref|NM_140587.1| Drosophila melanogaster CG5151-RA, transcript variant A (CG5151), mRNA Length = 2787 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 ggaggagcagcagcaggcggtg 342 |||||||||||||||||||||| Sbjct: 643 ggaggagcagcagcaggcggtg 664
>dbj|AK132222.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:3526402I11 product:carbonic anhydrase 10, full insert sequence Length = 3132 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccgcg 444 |||||||||||||||||||||| Sbjct: 437 ggctgccgccgccgccaccgcg 458
>ref|XM_688457.1| PREDICTED: Danio rerio similar to CDNA sequence BC019977 (LOC565172), mRNA Length = 2781 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 aggaggaagctggaggagcagc 331 |||||||||||||||||||||| Sbjct: 421 aggaggaagctggaggagcagc 442
>gb|AY061165.1| Drosophila melanogaster LD13176 full length cDNA Length = 2787 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 ggaggagcagcagcaggcggtg 342 |||||||||||||||||||||| Sbjct: 643 ggaggagcagcagcaggcggtg 664
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 417 ggccgcggctgccgccgccgcc 438 |||||||||||||||||||||| Sbjct: 1127849 ggccgcggctgccgccgccgcc 1127828
>dbj|AK036003.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630026C21 product:carbonic anhydrase 10, full insert sequence Length = 1650 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccgcg 444 |||||||||||||||||||||| Sbjct: 597 ggctgccgccgccgccaccgcg 618
>dbj|AK039620.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330074E19 product:unclassifiable, full insert sequence Length = 2476 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 321 ggaggagcagcagcaggcggtggagctgcagcag 354 |||| |||||||||||| || ||||||||||||| Sbjct: 4 ggagcagcagcagcaggaggaggagctgcagcag 37
>dbj|AK038695.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230055O04 product:CARBONIC ANHYDRASE-RELATED PROTEIN 10 homolog [Mus musculus], full insert sequence Length = 1982 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccgcg 444 |||||||||||||||||||||| Sbjct: 476 ggctgccgccgccgccaccgcg 497
>dbj|AK038512.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230021I02 product:hypothetical protein, full insert sequence Length = 1329 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccgcg 444 |||||||||||||||||||||| Sbjct: 40 ggctgccgccgccgccaccgcg 61
>dbj|AK031441.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030432E13 product:protein kinase, cAMP dependent, catalytic, beta, full insert sequence Length = 3476 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 68 gccgccgctgccgccgccgccaccgc 93
>dbj|AK012302.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700029L05 product:hypothetical Carbonic anhydrase structure containing protein, full insert sequence Length = 1738 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccgcg 444 |||||||||||||||||||||| Sbjct: 559 ggctgccgccgccgccaccgcg 580
>dbj|AK048319.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130049B02 product:protein kinase, cAMP dependent, catalytic, beta, full insert sequence Length = 4070 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 15 gccgccgctgccgccgccgccaccgc 40
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||||||| |||||||||||||||| Sbjct: 6663281 gccgcggctaccgccgccgccaccgc 6663306 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 416 cggccgcggctgccgccgccgccaccgcgccg 447 ||||||| || |||||| |||||||||||||| Sbjct: 20782665 cggccgccgccgccgccaccgccaccgcgccg 20782696 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 gctgccgccgccgccaccgc 443 |||||||||||||||||||| Sbjct: 2120575 gctgccgccgccgccaccgc 2120556
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 427 gccgccgccgccaccgcgccga 448 |||||||||||||||||||||| Sbjct: 24785261 gccgccgccgccaccgcgccga 24785282 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 gctgccgccgccgccaccgc 443 |||||||||||||||||||| Sbjct: 26302049 gctgccgccgccgccaccgc 26302030 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gctgccgccgccgccaccgc 443 |||||||||||||||||||| Sbjct: 25143242 gctgccgccgccgccaccgc 25143261 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gctgccgccgccgccaccgc 443 |||||||||||||||||||| Sbjct: 25143224 gctgccgccgccgccaccgc 25143243 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccacc 441 |||||||||||||| ||||||||| Sbjct: 23898266 gccgcggctgccgcagccgccacc 23898243 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gctgccgccgccgccaccgc 443 |||||||||||||||||||| Sbjct: 10271852 gctgccgccgccgccaccgc 10271871
>dbj|AB221691.1| Mus musculus adult male liver DNA, clone:V02Y028A13 Length = 1350 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 412 cgctcggccgcggctgccgccgccgc 437 ||||||||||| |||||||||||||| Sbjct: 110 cgctcggccgccgctgccgccgccgc 85
>gb|AC104667.5| Homo sapiens BAC clone RP11-810D14 from 2, complete sequence Length = 95682 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggagc 328 |||||||||||||||||||||| Sbjct: 12713 ctgaggaggaagctggaggagc 12734
>gb|AC007608.7| Homo sapiens chromosome 16 clone RP11-401P9, complete sequence Length = 169773 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||||||||||||||||||| |||| Sbjct: 163042 gccgcggctgccgccgccgccgccgc 163017
>gb|AC007334.8| Homo sapiens chromosome 16 clone RP11-147B17, complete sequence Length = 170791 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||||||||||||||||||| |||| Sbjct: 112566 gccgcggctgccgccgccgccgccgc 112541
>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0501G01 Length = 154561 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 427 gccgccgccgccaccgcgccga 448 |||||||||||||||||||||| Sbjct: 8381 gccgccgccgccaccgcgccga 8402
>dbj|AB108672.1| Mus musculus Sox1 mRNA for transcriptional factor SOX1, complete cds Length = 1220 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 |||||||||||||| ||||||||||| Sbjct: 950 gccgcggctgccgctgccgccaccgc 925
>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0024L18 Length = 150128 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 gaggaggaagctggaggagcag 330 |||||||||||||||||||||| Sbjct: 112728 gaggaggaagctggaggagcag 112749
>gb|BC080800.1| Mus musculus RIKEN cDNA 2610009E16 gene, mRNA (cDNA clone MGC:91196 IMAGE:4945458), complete cds Length = 1265 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 425 ctgccgccgccgccaccgcgcc 446 |||||||||||||||||||||| Sbjct: 330 ctgccgccgccgccaccgcgcc 351
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 417 ggccgcggctgccgccgccgcc 438 |||||||||||||||||||||| Sbjct: 142973 ggccgcggctgccgccgccgcc 142994
>ref|XM_311947.2| Anopheles gambiae str. PEST ENSANGP00000011102 (ENSANGG00000008613), partial mRNA Length = 2937 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 279 gccgccgctgccgccgccgccaccgc 254
>gb|AF083097.1|AF083097 Monodelphis domestica transcription factor HOXA13 (HOXA13) gene, partial cds Length = 640 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||||||||||||||||||| |||| Sbjct: 544 gccgcggctgccgccgccgccgccgc 569
>emb|AL773558.14| Zebrafish DNA sequence from clone CH211-207M11 in linkage group 16, complete sequence Length = 196875 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 310 aggaggaagctggaggagcagc 331 |||||||||||||||||||||| Sbjct: 130433 aggaggaagctggaggagcagc 130412
>gb|AF145661.1|AF145661 Drosophila melanogaster clone GH10646 BcDNA.GH10646 (BcDNA.GH10646) mRNA, complete cds Length = 5254 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 326 agcagcagcaggcggtggagctgcagcagg 355 ||||||| |||||||||| ||||||||||| Sbjct: 2851 agcagcaacaggcggtggtgctgcagcagg 2880
>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete sequence Length = 102515 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 427 gccgccgccgccaccgcgccga 448 |||||||||||||||||||||| Sbjct: 5625 gccgccgccgccaccgcgccga 5604
>gb|AE003528.3| Drosophila melanogaster chromosome 3L, section 57 of 83 of the complete sequence Length = 283815 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 ggaggagcagcagcaggcggtg 342 |||||||||||||||||||||| Sbjct: 121245 ggaggagcagcagcaggcggtg 121224
>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete sequence Length = 290970 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 326 agcagcagcaggcggtggagctgcagcagg 355 ||||||| |||||||||| ||||||||||| Sbjct: 119666 agcagcaacaggcggtggtgctgcagcagg 119695
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 419 ccgcggctgccgccgccgccaccgcg 444 ||||||| |||||||||||||||||| Sbjct: 3877366 ccgcggcggccgccgccgccaccgcg 3877391
>gb|AC153915.5| Mus musculus 10 BAC RP23-329D23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207169 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 60631 gccgccgctgccgccgccgccaccgc 60606
>gb|AF037989.1|AF037989 Homo sapiens STAT-induced STAT inhibitor-2 mRNA, complete cds Length = 1947 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 414 ctcggccgcggctgccgccgccgccaccgc 443 |||||||||||| |||||||||||| |||| Sbjct: 98 ctcggccgcggccgccgccgccgcctccgc 69
>dbj|AB080741.1| Mus musculus Car10 mRNA for carbonic anhydrase-related protein X, complete cds Length = 2827 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccgcg 444 |||||||||||||||||||||| Sbjct: 552 ggctgccgccgccgccaccgcg 573
>ref|NM_028296.1| Mus musculus carbonic anhydrase 10 (Car10), mRNA Length = 2827 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccgcg 444 |||||||||||||||||||||| Sbjct: 552 ggctgccgccgccgccaccgcg 573
>gb|AC133192.3| Mus musculus BAC clone RP23-396C4 from 9, complete sequence Length = 197959 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 477 ccacacgactgccaccacccct 498 |||||||||||||||||||||| Sbjct: 132343 ccacacgactgccaccacccct 132322
>gb|AC153022.1| Mus musculus 6 BAC RP23-115M13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201949 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 163813 gccgccgctgccgccgccgccaccgc 163788
>dbj|AP004485.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08D14, TM0018, complete sequence Length = 86539 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 130 gtcaagccctacaaggagaagggaaa 155 ||||| |||||||||||||||||||| Sbjct: 7809 gtcaaaccctacaaggagaagggaaa 7834
>emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chromosome 4, complete sequence Length = 208265 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 412 cgctcggccgcggctgccgccgccgc 437 ||||||||||| |||||||||||||| Sbjct: 102285 cgctcggccgccgctgccgccgccgc 102310
>gb|M88302.1|MUSPOUDOMD Mouse scip POU-domain protein, complete cds Length = 2766 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 412 cgctcggccgcggctgccgccgccgc 437 ||||||||||| |||||||||||||| Sbjct: 810 cgctcggccgccgctgccgccgccgc 785
>gb|M21096.1|MUSPKCDB Mouse cAMP-dependent protein kinase beta subunit gene, exon 1 Length = 452 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgccaccgc 443 ||||| |||||||||||||||||||| Sbjct: 160 gccgccgctgccgccgccgccaccgc 185
>gb|M62945.1|STMGLAAJ S.glaucescens S fragment deletion/rearrangement sequence, partial sequence Length = 162 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 cggccgcggctgccgccgccgccacc 441 ||||||||||| |||||||||||||| Sbjct: 54 cggccgcggctcccgccgccgccacc 79
>ref|XM_475415.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1419 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 419 ccgcggctgccgccgccgccaccgc 443 |||| |||||||||||||||||||| Sbjct: 514 ccgccgctgccgccgccgccaccgc 538
>ref|XM_464779.1| Oryza sativa (japonica cultivar-group), mRNA Length = 573 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 321 ggaggagcagcagcaggcggtggag 345 ||||||||||||||||| ||||||| Sbjct: 180 ggaggagcagcagcaggtggtggag 204
>ref|XM_450184.1| Oryza sativa (japonica cultivar-group), mRNA Length = 765 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 421 gcggctgccgccgccgccaccgcgc 445 |||||||||||||||||| |||||| Sbjct: 228 gcggctgccgccgccgccgccgcgc 204
>gb|DQ022605.1| Zea diploperennis cultivar CIMMYT_9476a Opaque-2 (O2) gene, partial cds Length = 2022 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 602 ctgaggaggaagctggaggag 622
>gb|DQ022604.1| Zea mays subsp. huehuetenangensis cultivar CIMMYT_9479a Opaque-2 (O2) gene, partial cds Length = 2055 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 625 ctgaggaggaagctggaggag 645
>gb|DQ022603.1| Zea mays subsp. mexicana cultivar CIMMYT_11396 Opaque-2 (O2) gene, partial cds Length = 2051 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 617 ctgaggaggaagctggaggag 637
>gb|DQ022602.1| Zea mays subsp. mexicana cultivar CIMMYT_11394 Opaque-2 (O2) gene, partial cds Length = 2027 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 621 ctgaggaggaagctggaggag 641
>gb|DQ022601.1| Zea mays subsp. mexicana cultivar CIMMYT_11397 Opaque-2 (O2) gene, partial cds Length = 1947 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 553 ctgaggaggaagctggaggag 573
>gb|DQ022600.1| Zea mays subsp. mexicana cultivar CIMMYT_8771 Opaque-2 (O2) gene, partial cds Length = 2008 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 608 ctgaggaggaagctggaggag 628
>gb|DQ022599.1| Zea mays subsp. mexicana cultivar CIMMYT_12823 Opaque-2 (O2) gene, partial cds Length = 2020 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 591 ctgaggaggaagctggaggag 611
>gb|DQ022598.1| Zea mays subsp. parviglumis cultivar CIMMYT_11403 Opaque-2 (O2) gene, partial cds Length = 2006 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 597 ctgaggaggaagctggaggag 617
>gb|DQ022597.1| Zea mays subsp. parviglumis cultivar El Rodeo Opaque-2 (O2) gene, partial cds Length = 2017 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 594 ctgaggaggaagctggaggag 614
>gb|DQ022596.1| Zea mays subsp. parviglumis cultivar CIMMYT_9477 Opaque-2 (O2) gene, partial cds Length = 2017 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 594 ctgaggaggaagctggaggag 614
>gb|DQ022595.1| Zea mays cultivar Tuxpeno Opaque-2 (O2) gene, partial cds Length = 2021 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 591 ctgaggaggaagctggaggag 611
>gb|DQ022594.1| Zea mays cultivar Chapalote Opaque-2 (O2) gene, partial cds Length = 1947 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 553 ctgaggaggaagctggaggag 573
>gb|DQ022593.1| Zea mays cultivar Confite Morocho Opaque-2 (O2) gene, partial cds Length = 2020 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 591 ctgaggaggaagctggaggag 611
>gb|DQ022592.1| Zea mays cultivar Jala Opaque-2 (O2) gene, partial cds Length = 2038 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 591 ctgaggaggaagctggaggag 611
>gb|DQ022591.1| Zea mays cultivar Coroico Opaque-2 (O2) gene, partial cds Length = 2038 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 591 ctgaggaggaagctggaggag 611
>gb|DQ022590.1| Zea mays cultivar Altiplano Opaque-2 (O2) gene, partial cds Length = 2023 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 594 ctgaggaggaagctggaggag 614
>gb|DQ022589.1| Zea mays cultivar mays Coest6 Opaque-2 (O2) gene, partial cds Length = 2071 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 615 ctgaggaggaagctggaggag 635
>gb|DQ022588.1| Zea mays cultivar Co158 Opaque-2 (O2) gene, partial cds Length = 2035 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 603 ctgaggaggaagctggaggag 623
>gb|DQ022587.1| Zea mays cultivar LH82 Opaque-2 (O2) gene, partial cds Length = 2015 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 579 ctgaggaggaagctggaggag 599
>gb|DQ022586.1| Zea mays cultivar LH74 Opaque-2 (O2) gene, partial cds Length = 2012 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 591 ctgaggaggaagctggaggag 611
>gb|DQ022585.1| Zea mays cultivar LH52 Opaque-2 (O2) gene, partial cds Length = 2015 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 579 ctgaggaggaagctggaggag 599
>gb|DQ022584.1| Zea mays cultivar LH146 Opaque-2 (O2) gene, partial cds Length = 2011 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 579 ctgaggaggaagctggaggag 599
>gb|DQ022583.1| Zea mays cultivar F7001 Opaque-2 (O2) gene, partial cds Length = 2023 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 591 ctgaggaggaagctggaggag 611
>gb|DQ022582.1| Zea mays cultivar F584 Opaque-2 (O2) gene, partial cds Length = 2035 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 603 ctgaggaggaagctggaggag 623
>gb|DQ022581.1| Zea mays cultivar F476 Opaque-2 (O2) gene, partial cds Length = 2035 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 603 ctgaggaggaagctggaggag 623
>gb|DQ022580.1| Zea mays cultivar F292 Opaque-2 (O2) gene, partial cds Length = 2050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 603 ctgaggaggaagctggaggag 623
>gb|DQ022579.1| Zea mays cultivar F284 Opaque-2 (O2) gene, partial cds Length = 2047 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 591 ctgaggaggaagctggaggag 611
>gb|DQ022578.1| Zea mays cultivar F283 Opaque-2 (O2) gene, partial cds Length = 2035 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 582 ctgaggaggaagctggaggag 602
>gb|DQ022577.1| Zea mays cultivar F252 Opaque-2 (O2) gene, partial cds Length = 2049 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 602 ctgaggaggaagctggaggag 622
>gb|DQ022576.1| Zea mays cultivar F2 Opaque-2 (O2) gene, partial cds Length = 2011 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 579 ctgaggaggaagctggaggag 599
>gb|DQ022575.1| Zea mays cultivar F1852 Opaque-2 (O2) gene, partial cds Length = 2023 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 591 ctgaggaggaagctggaggag 611
>gb|DQ022574.1| Zea mays cultivar F113 Opaque-2 (O2) gene, partial cds Length = 1936 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 591 ctgaggaggaagctggaggag 611
>gb|DQ022573.1| Zea mays cultivar CO255 Opaque-2 (O2) gene, partial cds Length = 2011 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 579 ctgaggaggaagctggaggag 599
>ref|NM_214014.1| Sus scrofa forkhead/winged helix transcription factor FOXO1a (FOXO1A), mRNA Length = 2162 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 419 ccgcggctgccgccgccgccaccgc 443 |||||||||||||||||||| |||| Sbjct: 330 ccgcggctgccgccgccgccgccgc 306 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 gcggctgccgccgccgccaccgcg 444 ||||| |||||||||||||||||| Sbjct: 349 gcggcggccgccgccgccaccgcg 326
>ref|NM_024572.2| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) (GALNT14), mRNA Length = 2762 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 419 ccgcggctgccgccgccgccaccgc 443 |||||||||||||||||||| |||| Sbjct: 320 ccgcggctgccgccgccgccgccgc 296
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccgc 443 ||||||||||||||||||||| Sbjct: 297083 ggctgccgccgccgccaccgc 297103
>gb|BT016530.1| Zea mays clone Contig363 mRNA sequence Length = 1677 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 1112 ctgaggaggaagctggaggag 1092
>ref|XM_871438.1| PREDICTED: Bos taurus similar to Forkhead box protein B2 (Transcription factor FKH-4) (LOC619119), partial mRNA Length = 416 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 ggccgcggctgccgccgccgc 437 ||||||||||||||||||||| Sbjct: 140 ggccgcggctgccgccgccgc 160
>gb|AY731549.1| Arachis hypogaea clone PM734 microsatellite sequence Length = 350 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgcgcc 446 ||||| || |||||||||||||||||||| Sbjct: 196 gccgccgccgccgccgccgccaccgcgcc 168
>gb|AC121362.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009N21, complete sequence Length = 164925 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccg 442 ||||| ||||||||||||||||||| Sbjct: 42715 gccgccgctgccgccgccgccaccg 42691
>ref|XM_363150.1| Magnaporthe grisea 70-15 predicted protein (MG08734.4) partial cds Length = 1116 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 419 ccgcggctgccgccgccgccaccgcgccg 447 |||| |||||| ||||||||||||||||| Sbjct: 20 ccgctgctgccaccgccgccaccgcgccg 48
>ref|XM_582079.2| PREDICTED: Bos taurus similar to kelch-like 11 (LOC538695), mRNA Length = 2437 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccac 440 ||||||| ||||||||||||||||| Sbjct: 96 cggccgccgctgccgccgccgccac 72
>ref|XM_585174.2| PREDICTED: Bos taurus similar to ankyrin repeat domain protein 17 isoform a (LOC508405), mRNA Length = 6948 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 419 ccgcggctgccgccgccgccaccgc 443 |||||||||||||||||||| |||| Sbjct: 130 ccgcggctgccgccgccgccgccgc 106
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 419 ccgcggctgccgccgccgccaccgc 443 |||| |||||||||||||||||||| Sbjct: 19341 ccgccgctgccgccgccgccaccgc 19365
>gb|AC165142.3| Mus musculus BAC clone RP24-484I1 from chromosome 7, complete sequence Length = 165049 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 aggaggaagctggaggagcag 330 ||||||||||||||||||||| Sbjct: 56309 aggaggaagctggaggagcag 56329
>gb|AC004890.2| Homo sapiens PAC clone RP4-800G7 from 7, complete sequence Length = 164028 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgcgcc 446 ||||| ||||||||||| ||||||||||| Sbjct: 13143 gccgccgctgccgccgctgccaccgcgcc 13115
>gb|AY358758.1| Homo sapiens clone DNA96986 RRLT2434 (UNQ2434) mRNA, complete cds Length = 2476 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 419 ccgcggctgccgccgccgccaccgc 443 |||||||||||||||||||| |||| Sbjct: 34 ccgcggctgccgccgccgccgccgc 10
>emb|CR653995.2|CNS0F3LD Tetraodon nigroviridis full-length cDNA Length = 1832 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 aggagcagcagcaggcggtgg 343 ||||||||||||||||||||| Sbjct: 532 aggagcagcagcaggcggtgg 512
>gb|BC052801.1| Homo sapiens cDNA clone IMAGE:6455389, **** WARNING: chimeric clone **** Length = 2816 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 417 ggccgcggctgccgccgccgccaccgcgc 445 |||||| ||||||||||||||| |||||| Sbjct: 33 ggccgccgctgccgccgccgccgccgcgc 5
>ref|NM_009109.1| Mus musculus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA Length = 15358 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 aggaggaagctggaggagcag 330 ||||||||||||||||||||| Sbjct: 13716 aggaggaagctggaggagcag 13736
>emb|AL034417.14|HS215D11 Human DNA sequence from clone CTA-215D11 on chromosome 1p36.12-36.33 Contains the PARK7 gene for Parkinson disease (autosomal recessive, early onset) 7, a novel gene, gene 33/Mig-6 (MIG-6), a ribosomal protein L7a (RPL7A) pseudogene, the 5' end of a novel gene (FLJ26758) and two CpG islands, complete sequence Length = 122279 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 gccgcggctgccgccgccgcc 438 ||||||||||||||||||||| Sbjct: 75154 gccgcggctgccgccgccgcc 75174
>gb|AC103018.7| Rattus norvegicus 1 CH230-196F22 (Children's Hospital Oakland Research Institute) complete sequence Length = 212568 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 ggctgccgccgccgccaccgc 443 ||||||||||||||||||||| Sbjct: 184153 ggctgccgccgccgccaccgc 184173
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccg 442 |||||||| |||||||||||||||| Sbjct: 12172 gccgcggccgccgccgccgccaccg 12148
>ref|XM_781090.1| PREDICTED: Strongylocentrotus purpuratus similar to arylacetamide deacetylase (esterase) (LOC581067), mRNA Length = 912 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 388 ctgcagatgctcgacctcaagacac 412 ||||||||||| ||||||||||||| Sbjct: 340 ctgcagatgctggacctcaagacac 364
>gb|BC051248.1| Mus musculus ryanodine receptor 1, skeletal muscle, mRNA (cDNA clone IMAGE:5011473), partial cds Length = 1759 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 aggaggaagctggaggagcag 330 ||||||||||||||||||||| Sbjct: 85 aggaggaagctggaggagcag 105
>gb|BC021465.1| Mus musculus, clone IMAGE:5068657, mRNA, partial cds Length = 476 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 426 tgccgccgccgccaccgcgcc 446 ||||||||||||||||||||| Sbjct: 24 tgccgccgccgccaccgcgcc 44
>emb|X15544.1|ZMOPA2 Zea mays opaque-2 gene Length = 4761 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 1927 ctgaggaggaagctggaggag 1947
>emb|X16618.1|ZMO2 Maize Opaque (O2) mRNA for regulation of zein deposition Length = 1751 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 686 ctgaggaggaagctggaggag 706
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 114 cgacgcgcgcgtgctcgtcaagccc 138 ||||||||||||||||||| ||||| Sbjct: 839839 cgacgcgcgcgtgctcgtcgagccc 839863
>gb|BC043295.2| Homo sapiens zinc finger protein 398, transcript variant 1, mRNA (cDNA clone MGC:44469 IMAGE:5298104), complete cds Length = 2878 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccgcgcc 446 ||||| ||||||||||| ||||||||||| Sbjct: 233 gccgccgctgccgccgctgccaccgcgcc 205
>gb|BC010659.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14), mRNA (cDNA clone MGC:16841 IMAGE:3874588), complete cds Length = 2741 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 419 ccgcggctgccgccgccgccaccgc 443 |||||||||||||||||||| |||| Sbjct: 341 ccgcggctgccgccgccgccgccgc 317
>emb|AJ491300.1|ZMA491300 Zea mays mRNA for Opaque-2 protein (o2 gene), o2-52 allele Length = 1330 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 391 ctgaggaggaagctggaggag 411
>emb|AJ491297.1|ZMA491297 Zea mays mRNA for Opaque-2 protein (o2 gene) Length = 1459 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 492 ctgaggaggaagctggaggag 512
>emb|AJ720200.1| Gallus gallus mRNA for hypothetical protein, clone 12g8 Length = 1535 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 cacgctcggccgcggctgccgccgc 434 ||||||||||||| ||||||||||| Sbjct: 34 cacgctcggccgccgctgccgccgc 10
>emb|CR859209.1| Pongo pygmaeus mRNA; cDNA DKFZp459E1731 (from clone DKFZp459E1731) Length = 3719 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 gccgccgccgccaccgcgccg 447 ||||||||||||||||||||| Sbjct: 122 gccgccgccgccaccgcgccg 102
>ref|NM_001006539.1| Gallus gallus aldo-keto reductase family 1, member A1 (aldehyde reductase) (AKR1A1), mRNA Length = 1535 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 cacgctcggccgcggctgccgccgc 434 ||||||||||||| ||||||||||| Sbjct: 34 cacgctcggccgccgctgccgccgc 10
>dbj|AK024039.1| Homo sapiens cDNA FLJ13977 fis, clone Y79AA1001603, weakly similar to POLYPEPTIDE N-ACETYLGALACTOSAMINYLTRANSFERASE (EC 2.4.1.41) Length = 2224 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 419 ccgcggctgccgccgccgccaccgc 443 |||||||||||||||||||| |||| Sbjct: 119 ccgcggctgccgccgccgccgccgc 95
>gb|AY094061.1| Sus scrofa forkhead/winged helix transcription factor FOXO1a (foxo1a) mRNA, complete cds Length = 2162 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 419 ccgcggctgccgccgccgccaccgc 443 |||||||||||||||||||| |||| Sbjct: 330 ccgcggctgccgccgccgccgccgc 306 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 gcggctgccgccgccgccaccgcg 444 ||||| |||||||||||||||||| Sbjct: 349 gcggcggccgccgccgccaccgcg 326
>gb|AF064868.1| Rattus norvegicus brain-enriched guanylate kinase-associated protein 2 mRNA, complete cds Length = 2640 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 ggctgccgccgccgccaccgc 443 ||||||||||||||||||||| Sbjct: 1521 ggctgccgccgccgccaccgc 1501
>gb|AF064869.1| Rattus norvegicus brain-enriched guanylate kinase-associated protein 1 mRNA, complete cds Length = 2259 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 ggctgccgccgccgccaccgc 443 ||||||||||||||||||||| Sbjct: 1479 ggctgccgccgccgccaccgc 1459
>ref|XM_678667.1| PREDICTED: Danio rerio similar to myosin, heavy polypeptide 7B, cardiac muscle, beta (LOC555976), mRNA Length = 2055 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 gctggaggagcagcagcaggcggtg 342 |||||||||||||| |||||||||| Sbjct: 1248 gctggaggagcagctgcaggcggtg 1272
>gb|AY268935.1| Mus musculus ryanodine receptor (Ryr1) mRNA, complete cds Length = 15358 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 aggaggaagctggaggagcag 330 ||||||||||||||||||||| Sbjct: 13716 aggaggaagctggaggagcag 13736
>emb|AJ491299.1|ZMA491299 Zea mays mRNA for Opaque-2 protein (o2 gene), o2It allele Length = 1479 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 514 ctgaggaggaagctggaggag 534
>emb|AJ491298.1|ZMA491298 Zea mays mRNA for Opaque-2 protein (o2 gene), o2T allele Length = 1434 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctgaggaggaagctggaggag 327 ||||||||||||||||||||| Sbjct: 492 ctgaggaggaagctggaggag 512
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 422 cggctgccgccgccgccaccgcgcc 446 |||||||||||||||| |||||||| Sbjct: 1617373 cggctgccgccgccgcaaccgcgcc 1617349 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 gccgccgccaccgcgccgac 449 |||||||||||||||||||| Sbjct: 1243636 gccgccgccaccgcgccgac 1243617
>ref|NM_072553.2| Caenorhabditis elegans F19F10.10 (F19F10.10) mRNA, complete cds Length = 2717 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 actccaacagcgccaacgaga 301 ||||||||||||||||||||| Sbjct: 2061 actccaacagcgccaacgaga 2081
>emb|BX933180.2| Gallus gallus finished cDNA, clone ChEST380m23 Length = 1006 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 ggctgccgccgccgccaccgc 443 ||||||||||||||||||||| Sbjct: 54 ggctgccgccgccgccaccgc 34
>emb|BX930947.2| Gallus gallus finished cDNA, clone ChEST66h19 Length = 1086 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 ggctgccgccgccgccaccgc 443 ||||||||||||||||||||| Sbjct: 44 ggctgccgccgccgccaccgc 24
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 421 gcggctgccgccgccgccaccgcgc 445 |||||||||||||||||| |||||| Sbjct: 21084900 gcggctgccgccgccgccgccgcgc 21084876 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 425 ctgccgccgccgccaccgcgc 445 ||||||||||||||||||||| Sbjct: 11342953 ctgccgccgccgccaccgcgc 11342933 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 416 cggccgcggctgccgccgccgccaccgc 443 |||| ||||| ||||||||||||||||| Sbjct: 19802848 cggcggcggcggccgccgccgccaccgc 19802875 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ccgcggctgccgccgccgcc 438 |||||||||||||||||||| Sbjct: 16681776 ccgcggctgccgccgccgcc 16681757
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 424 gctgccgccgccgccaccgcgccga 448 ||||||||||||||| ||||||||| Sbjct: 7659120 gctgccgccgccgcctccgcgccga 7659144 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 cggctgccgccgccgccacc 441 |||||||||||||||||||| Sbjct: 30585123 cggctgccgccgccgccacc 30585142 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 gctgccgccgccgccaccgcgccg 447 ||||| |||||||||||||||||| Sbjct: 16954777 gctgctgccgccgccaccgcgccg 16954754 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 416 cggccgcggctgccgccgccgccaccgc 443 |||| |||||||||||||||||| |||| Sbjct: 10112969 cggcagcggctgccgccgccgccgccgc 10112996 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 gccgccgccgccaccgcgcc 446 |||||||||||||||||||| Sbjct: 3660320 gccgccgccgccaccgcgcc 3660339
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 419 ccgcggctgccgccgccgccaccgc 443 |||| |||||||||||||||||||| Sbjct: 23333805 ccgccgctgccgccgccgccaccgc 23333829 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccg 442 ||||| ||||||||||||||||||| Sbjct: 9166060 gccgccgctgccgccgccgccaccg 9166036 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gctgccgccgccgccaccgc 443 |||||||||||||||||||| Sbjct: 20535280 gctgccgccgccgccaccgc 20535299 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 gctgccgccgccgccaccgc 443 |||||||||||||||||||| Sbjct: 20146164 gctgccgccgccgccaccgc 20146145 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ccgcggctgccgccgccgcc 438 |||||||||||||||||||| Sbjct: 6465867 ccgcggctgccgccgccgcc 6465848 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 cggctgccgccgccgccaccgcgc 445 |||| ||||||||||||||||||| Sbjct: 2289223 cggccgccgccgccgccaccgcgc 2289200
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 321 ggaggagcagcagcaggcggtggag 345 ||||||||||||||||| ||||||| Sbjct: 7309699 ggaggagcagcagcaggtggtggag 7309723 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cagcagggcgagagagtgga 197 |||||||||||||||||||| Sbjct: 31434399 cagcagggcgagagagtgga 31434380 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 gctgccgccgccgccaccgc 443 |||||||||||||||||||| Sbjct: 25637451 gctgccgccgccgccaccgc 25637432 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 gccgccgccgccaccgcgcc 446 |||||||||||||||||||| Sbjct: 14207279 gccgccgccgccaccgcgcc 14207260 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgccgccaccgc 443 ||||||| || ||||||||||||||||| Sbjct: 12816338 cggccgccgccgccgccgccgccaccgc 12816311 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 cggccgcggctgccgccgcc 435 |||||||||||||||||||| Sbjct: 5941828 cggccgcggctgccgccgcc 5941809
>gb|AC015980.4| Homo sapiens BAC clone RP11-541A15 from 2, complete sequence Length = 97846 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 419 ccgcggctgccgccgccgccaccgc 443 |||||||||||||||||||| |||| Sbjct: 5620 ccgcggctgccgccgccgccgccgc 5644
>ref|NM_024163.1| Rattus norvegicus brain-enriched guanylate kinase-associated (Begain), mRNA Length = 2640 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 ggctgccgccgccgccaccgc 443 ||||||||||||||||||||| Sbjct: 1521 ggctgccgccgccgccaccgc 1501
>gb|AC138474.2| Homo sapiens chromosome 19 clone CTC-239J10, complete sequence Length = 63799 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 417 ggccgcggctgccgccgccgccaccgcgc 445 |||||| ||||||||||||||| |||||| Sbjct: 51656 ggccgccgctgccgccgccgccgccgcgc 51684
>ref|XM_218939.3| PREDICTED: Rattus norvegicus hepatitis B virus x associated protein (predicted) (Hbxap_predicted), mRNA Length = 5158 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 418 gccgcggctgccgccgccgccaccg 442 ||||| ||||||||||||||||||| Sbjct: 152 gccgccgctgccgccgccgccaccg 128
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 tggagctgcagcaggcgatcgagct 365 ||||||||| ||||||||||||||| Sbjct: 2684042 tggagctgccgcaggcgatcgagct 2684018
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 424 gctgccgccgccgccaccgcgccga 448 ||||||||||||||| ||||||||| Sbjct: 82375 gctgccgccgccgcctccgcgccga 82399
>dbj|AP007202.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa054B01 Length = 36624 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 425 ctgccgccgccgccaccgcgc 445 ||||||||||||||||||||| Sbjct: 13365 ctgccgccgccgccaccgcgc 13345 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,432,836 Number of Sequences: 3902068 Number of extensions: 5432836 Number of successful extensions: 188603 Number of sequences better than 10.0: 737 Number of HSP's better than 10.0 without gapping: 775 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 174374 Number of HSP's gapped (non-prelim): 14149 length of query: 559 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 536 effective length of database: 17,143,297,704 effective search space: 9188807569344 effective search space used: 9188807569344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
