ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalb12 |
|---|---|
| Clone Library Name | barley_pub |
>Y112B_HAEIN (O86233) Hypothetical protein HI1126.1| Length = 371 Score = 35.0 bits (79), Expect = 0.14 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 13/103 (12%) Frame = +1 Query: 247 MLWIFYALVKTGEGLLITINAAGCVIETVYII-------MYLV-----YAPR-KAKIFTA 387 MLW F+ + L+I G +IE +++I Y V Y P K KI+ Sbjct: 6 MLWFFFCVTV----LIIGYFIYGKIIEKIFVINPKRQTPAYQVNDGVDYMPMSKTKIW-- 59 Query: 388 KIVLLLNIAGFGLIFVLTLFAFHGETRVVSLGWICVGFSVCVF 516 ++ LLNIAG G IF L A +G V++ WI +G C+F Sbjct: 60 -LIQLLNIAGTGPIFGPILGALYGP---VAMLWIVIG---CIF 95
>CYB_TAXTA (O78937) Cytochrome b| Length = 379 Score = 33.1 bits (74), Expect = 0.54 Identities = 17/45 (37%), Positives = 28/45 (62%) Frame = +1 Query: 37 FFASISLLYIFVTMGGLSMEHPWAFTFGLLGNVISFSSLLAPIPT 171 F+ ++ L I +GG +EHP+ T G L +++ F+ LLA +PT Sbjct: 325 FWLLVADLLILTWIGGQPVEHPY-ITIGQLASILYFTILLALMPT 368
>COX1_RHILE (Q08855) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) (Cytochrome aa3 subunit 1) Length = 538 Score = 32.3 bits (72), Expect = 0.92 Identities = 44/203 (21%), Positives = 75/203 (36%), Gaps = 43/203 (21%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWAFTFGLLGNVISF------SSLLAPIPTFYRIFKSKST 201 F I ++Y +GGL WA ++G + ++++ +PT +IF +T Sbjct: 292 FGYIGMVYAMAAIGGLGFV-VWAHHMYIVGMDLDTEAYFVSATMIIAVPTGIKIFSWIAT 350 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 S+ + + A+ +IF V G+++ + V+ +T Y++ + Y I Sbjct: 351 MWGGSIEFATPMLWALAFIFLFTVGGVTGVVLANASLDRVLHDTYYVVAHFHYVLSLGAI 410 Query: 379 FT---------------------AKIVLLLNIAGFGLIFVLTLF---------------A 450 F A+ L G LIF F A Sbjct: 411 FAIFAGWYYWFPKMSGYMYNETLAEAHFWLIFIGVNLIFFPEHFLGISGMPRRYIDYPDA 470 Query: 451 FHGETRVVSLGWICVGFSVCVFV 519 F G V S+G GFSV +F+ Sbjct: 471 FAGWNLVSSIGSYISGFSVLLFI 493
>COX1_RICPR (O54069) Probable cytochrome c oxidase subunit 1 (EC 1.9.3.1)| (Cytochrome c oxidase polypeptide I) (Cytochrome aa3 subunit 1) Length = 534 Score = 31.6 bits (70), Expect = 1.6 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 7/102 (6%) Frame = +1 Query: 103 WA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLWIFY 264 WA FT GL N + + +++ +PT +IF +T S+ + + A+ +I Sbjct: 307 WAHHMFTVGLSYNALIYFTAGTMIIAVPTGIKIFSWIATMWGGSITFPTPMLFAIGFIIL 366 Query: 265 ALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKIFTA 387 + G++++ +A V+ +T Y++ + Y +FTA Sbjct: 367 FTIGGVTGIILSNSALDRVLHDTYYVVAHFHYTMSLGALFTA 408
>FTSW_CYAPA (P48280) Cell division protein ftsW homolog| Length = 397 Score = 31.6 bits (70), Expect = 1.6 Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 8/157 (5%) Frame = +1 Query: 43 ASISLLYIFVTMGGLSMEHPWAFTFG--LLGNVISFSSL------LAPIPTFYRIFKSKS 198 ++ SLL I + + GL PW + G +G ++ +S+ L+ I +F +K Sbjct: 194 STASLLGITLWLMGLCANFPWKYLLGTVFVGLSMAITSISLKPYQLSRITSFLDPWKDPR 253 Query: 199 TEGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVIETVYIIMYLVYAPRKAKI 378 +G+Q V ++ + S ++ G G I++ G + ++ VY I Sbjct: 254 GKGYQLVQSLITIGSGGIF--------GTGYGISLQKTGYLPIHYTDFIFAVYIEEFGFI 305 Query: 379 FTAKIVLLLNIAGFGLIFVLTLFAFHGETRVVSLGWI 489 ++LL+ I F L+ + L H R+V G I Sbjct: 306 GAVSLLLLI-IFYFLLVITVILKTNHPVLRLVGCGAI 341
>COX1_DROSI (Q34388) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) (Fragments) Length = 511 Score = 30.8 bits (68), Expect = 2.7 Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F S+ ++Y + +G L WA FT G+ + ++ ++++ +PT +IF +T Sbjct: 267 FGSLGMIYAMLAIGLLGFI-VWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLAT 325 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 + Y A+ A+ ++F V G+++ ++ ++ +T Y++ + Y + Sbjct: 326 LHGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAV 385 Query: 379 F 381 F Sbjct: 386 F 386
>COX1_DROSE (Q34391) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) (Fragment) Length = 499 Score = 30.8 bits (68), Expect = 2.7 Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F S+ ++Y + +G L WA FT G+ + ++ ++++ +PT +IF +T Sbjct: 267 FGSLGMIYAMLAIGLLGFI-VWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLAT 325 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 + Y A+ A+ ++F V G+++ ++ ++ +T Y++ + Y + Sbjct: 326 LHGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAV 385 Query: 379 F 381 F Sbjct: 386 F 386
>COX1_DROMA (Q34345) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) (Fragment) Length = 499 Score = 30.8 bits (68), Expect = 2.7 Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F S+ ++Y + +G L WA FT G+ + ++ ++++ +PT +IF +T Sbjct: 267 FGSLGMIYAMLAIGLLGFI-VWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLAT 325 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 + Y A+ A+ ++F V G+++ ++ ++ +T Y++ + Y + Sbjct: 326 LHGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAV 385 Query: 379 F 381 F Sbjct: 386 F 386
>CYB_CHECR (Q539Z1) Cytochrome b| Length = 379 Score = 30.8 bits (68), Expect = 2.7 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = +1 Query: 37 FFASISLLYIFVTMGGLSMEHPWAFTFGLLGNVISFSSLLAPIPT 171 F+ + L+I +GG +EHP+ T G + +++ FS +L +PT Sbjct: 325 FWVLTADLFILTWIGGQPVEHPF-ITIGQMASILYFSLILIIMPT 368
>COX1_DROYA (P00400) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 512 Score = 30.8 bits (68), Expect = 2.7 Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F S+ ++Y + +G L WA FT G+ + ++ ++++ +PT +IF +T Sbjct: 267 FGSLGMIYAMLAIGLLGFI-VWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLAT 325 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 + Y A+ A+ ++F V G+++ ++ ++ +T Y++ + Y + Sbjct: 326 LHGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAV 385 Query: 379 F 381 F Sbjct: 386 F 386
>COX1_DROME (P00399) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 512 Score = 30.8 bits (68), Expect = 2.7 Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F S+ ++Y + +G L WA FT G+ + ++ ++++ +PT +IF +T Sbjct: 267 FGSLGMIYAMLAIGLLGFI-VWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLAT 325 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 + Y A+ A+ ++F V G+++ ++ ++ +T Y++ + Y + Sbjct: 326 LHGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAV 385 Query: 379 F 381 F Sbjct: 386 F 386
>COX1_MARPO (P26856) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 522 Score = 30.4 bits (67), Expect = 3.5 Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F + ++Y +++G L WA FT GL + ++ ++++ +PT +IF +T Sbjct: 271 FGYLGMVYAMISIGVLGFI-VWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIAT 329 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 S+ Y + A+ +IF V G+++ + + +T Y++ + Y + Sbjct: 330 MWGGSIQYKTPMLFAVGFIFLFTVGGLTGIVLANSGVDIALHDTYYVVAHFHYVLSMGAV 389 Query: 379 F 381 F Sbjct: 390 F 390
>CYB_IGUIG (Q956S6) Cytochrome b| Length = 379 Score = 30.4 bits (67), Expect = 3.5 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +1 Query: 19 PHCYTKFFASISLLYIFVTMGGLSMEHPWAFTFGLLGNVISFSSLLAPIPT 171 P T F+ IS + I +GG +EHP+ G L +V F+ L +PT Sbjct: 319 PFSQTLFWLLISNVLILTWIGGQPVEHPF-IIIGQLASVTYFTLFLVVMPT 368
>COX1_RICCN (Q92I67) Probable cytochrome c oxidase subunit 1 (EC 1.9.3.1)| (Cytochrome c oxidase polypeptide I) (Cytochrome aa3 subunit 1) Length = 532 Score = 30.4 bits (67), Expect = 3.5 Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 7/102 (6%) Frame = +1 Query: 103 WA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLWIFY 264 WA FT GL N + + +++ +PT +IF +T S+ + + ++ +I Sbjct: 305 WAHHMFTVGLSYNALIYFTAGTMIIAVPTGIKIFSWIATMWGGSITFPTPMLFSIGFIIL 364 Query: 265 ALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKIFTA 387 + G++++ +A V+ +T Y++ + Y +FTA Sbjct: 365 FTIGGVTGIILSNSALDRVLHDTYYVVAHFHYTMSLGALFTA 406
>CYB_PLABI (Q94S78) Cytochrome b| Length = 380 Score = 30.0 bits (66), Expect = 4.5 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = +1 Query: 37 FFASISLLYIFVTMGGLSMEHPWAFTFGLLGNVISFSSLLAPIPT 171 F++ ++ + I +GG+ +EHP+ G + ++I FS L IPT Sbjct: 325 FWSLVADVMILTWIGGMPVEHPFVI-IGQVASLIYFSLFLVLIPT 368
>COX1_BETVU (P24794) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 524 Score = 30.0 bits (66), Expect = 4.5 Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F + ++Y +++G L WA FT GL + ++ ++++ +PT +IF +T Sbjct: 270 FGYLGMVYAMISIGVLGFL-VWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIAT 328 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 S+ Y + A+ +IF V G+++ + + +T Y++ + Y + Sbjct: 329 MWGGSIQYKTPMLFAVGFIFLFTVGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAV 388 Query: 379 F 381 F Sbjct: 389 F 389
>CYB_PRODD (Q5VJ61) Cytochrome b| Length = 379 Score = 30.0 bits (66), Expect = 4.5 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +1 Query: 37 FFASISLLYIFVTMGGLSMEHPWAFTFGLLGNVISFSSLLAPIPT 171 F+ ++ LY +GG +EHP+ T G +++ F+ +L +PT Sbjct: 325 FWILVADLYTLTWIGGQPVEHPF-ITIGQTASILYFTLILIAMPT 368
>CYB_BOVIN (P00157) Cytochrome b| Length = 379 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = +1 Query: 37 FFASISLLYIFVTMGGLSMEHPWAFTFGLLGNVISFSSLLAPIPT 171 F+A ++ L +GG +EHP+ T G L +V+ F +L +PT Sbjct: 325 FWALVADLLTLTWIGGQPVEHPY-ITIGQLASVLYFLLILVLMPT 368
>YMP0_YEAST (Q03687) Hypothetical 46.9 kDa protein in PLB1-HXT2 intergenic| region Length = 405 Score = 30.0 bits (66), Expect = 4.5 Identities = 24/91 (26%), Positives = 39/91 (42%) Frame = +1 Query: 103 WAFTFGLLGNVISFSSLLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLWIFYALVKTG 282 W + N+ISF+ L + T I K K+ GF L +++L I Y L+ Sbjct: 46 WLTMQFIANNLISFTPLFSYGTTIISIEKCKTALGFSIDICATMLIASILRISYYLITPY 105 Query: 283 EGLLITINAAGCVIETVYIIMYLVYAPRKAK 375 E L+ + I+ + + L Y P + K Sbjct: 106 EITLLRQSLVMIFIQLILLRTSLKYRPDEYK 136
>COX1_WHEAT (P68539) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 524 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F + ++Y +++G L WA FT GL + ++ ++++ +PT +IF +T Sbjct: 270 FGYLGMVYAMISIGVLGFL-VWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIAT 328 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 S+ Y + A+ +IF + G+++ + + +T Y++ + Y + Sbjct: 329 MWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAV 388 Query: 379 F 381 F Sbjct: 389 F 389
>COX1_ORYSA (P14578) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 524 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F + ++Y +++G L WA FT GL + ++ ++++ +PT +IF +T Sbjct: 270 FGYLGMVYAMISIGVLGFL-VWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIAT 328 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 S+ Y + A+ +IF + G+++ + + +T Y++ + Y + Sbjct: 329 MWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAV 388 Query: 379 F 381 F Sbjct: 389 F 389
>COX1_AEGCO (P68540) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 524 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F + ++Y +++G L WA FT GL + ++ ++++ +PT +IF +T Sbjct: 270 FGYLGMVYAMISIGVLGFL-VWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIAT 328 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 S+ Y + A+ +IF + G+++ + + +T Y++ + Y + Sbjct: 329 MWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAV 388 Query: 379 F 381 F Sbjct: 389 F 389
>COX1_SORBI (P05502) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 530 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F + ++Y +++G L WA FT GL + ++ ++++ +PT +IF +T Sbjct: 270 FGYLGMVYAMISIGVLGFL-VWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIAT 328 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 S+ Y + A+ +IF + G+++ + + +T Y++ + Y + Sbjct: 329 MWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAV 388 Query: 379 F 381 F Sbjct: 389 F 389
>COX1_SOYBN (P07506) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 527 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F + ++Y +++G L WA FT GL + ++ ++++ +PT +IF +T Sbjct: 270 FGYLGMVYAMISIGVLGFL-VWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIAT 328 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 S+ Y + A+ +IF + G+++ + + +T Y++ + Y + Sbjct: 329 MWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAV 388 Query: 379 F 381 F Sbjct: 389 F 389
>COX1_RAPSA (P60621) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 527 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F + ++Y +++G L WA FT GL + ++ ++++ +PT +IF +T Sbjct: 270 FGYLGMVYAMISIGVLGFL-VWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIAT 328 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 S+ Y + A+ +IF + G+++ + + +T Y++ + Y + Sbjct: 329 MWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAV 388 Query: 379 F 381 F Sbjct: 389 F 389
>COX1_ARATH (P60620) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 527 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F + ++Y +++G L WA FT GL + ++ ++++ +PT +IF +T Sbjct: 270 FGYLGMVYAMISIGVLGFL-VWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIAT 328 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 S+ Y + A+ +IF + G+++ + + +T Y++ + Y + Sbjct: 329 MWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAV 388 Query: 379 F 381 F Sbjct: 389 F 389
>AROC_BORPE (Q7VY92) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 353 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Frame = +3 Query: 69 CNNGWPIHGAPLGIHL---RPARQRHLFLEPPGPDTNILPDLQEQIHGGVPVGALCR 230 C G P+ A + L RP RH+ IL + E + G P+G L R Sbjct: 30 CPPGLPLEAADIQAELDRRRPGTSRHVTQRQEADQVEILSGVYEGVTTGTPIGLLIR 86
>AROC_BORPA (Q7W950) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 353 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Frame = +3 Query: 69 CNNGWPIHGAPLGIHL---RPARQRHLFLEPPGPDTNILPDLQEQIHGGVPVGALCR 230 C G P+ A + L RP RH+ IL + E + G P+G L R Sbjct: 30 CPPGLPLEAADIQAELDRRRPGTSRHVTQRQEADQVEILSGVYEGVTTGTPIGLLIR 86
>AROC_BORBR (Q7WKJ5) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 353 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Frame = +3 Query: 69 CNNGWPIHGAPLGIHL---RPARQRHLFLEPPGPDTNILPDLQEQIHGGVPVGALCR 230 C G P+ A + L RP RH+ IL + E + G P+G L R Sbjct: 30 CPPGLPLEAADIQAELDRRRPGTSRHVTQRQEADQVEILSGVYEGVTTGTPIGLLIR 86
>COX1_MAIZE (P08742) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 528 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F + ++Y +++G L WA FT GL + ++ ++++ +PT +IF +T Sbjct: 270 FGYLGMVYAMISIGVLGFL-VWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIAT 328 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 S+ Y + A+ +IF + G+++ + + +T Y++ + Y + Sbjct: 329 MWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAV 388 Query: 379 F 381 F Sbjct: 389 F 389
>COX1_BRAJA (P31833) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) (Cytochrome aa3 subunit 1) Length = 541 Score = 29.6 bits (65), Expect = 5.9 Identities = 42/203 (20%), Positives = 75/203 (36%), Gaps = 43/203 (21%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F + + Y V +GG+ WA +T G+ ++ ++++ +PT +IF +T Sbjct: 295 FGYLGMAYAMVAIGGIGFV-VWAHHMYTVGMSSATQAYFVAATMVIAVPTGVKIFSWIAT 353 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 S+ + + A+ +IF V G+++ V+ ET Y++ + Y + Sbjct: 354 MWGGSIEFRAPMIWAVGFIFLFTVGGVTGVVLANAGVDRVLQETYYVVAHFHYVLSLGAV 413 Query: 379 FT---------------------AKIVLLLNIAGFGLIFVLTLF---------------A 450 F AK + G L+F F A Sbjct: 414 FAIFAGWYYWFPKMTGYMYNETLAKAHFWVTFIGVNLVFFPQHFLGLSGMPRRYVDYPDA 473 Query: 451 FHGETRVVSLGWICVGFSVCVFV 519 F G V S+G GF V +F+ Sbjct: 474 FAGWNLVSSVGSYISGFGVLIFL 496
>Y225_MYCGE (P47467) Hypothetical protein MG225| Length = 489 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 19/100 (19%) Frame = +1 Query: 118 GLLGNVISFSSLLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLWI---------FYAL 270 G+ GN+++ L+A +FY + ST+G ++ALF+++ WI Y + Sbjct: 122 GIRGNLVNTWILIAIGFSFYVLLAFISTKGTSLNKKLIALFASVKWIVILSALIVAIYVI 181 Query: 271 VKTGEGLLITINAAG----------CVIETVYIIMYLVYA 360 + G G N I TV+I + YA Sbjct: 182 ARDGNGYSQNNNLESGFFGRREISFAQIATVFITFFYSYA 221
>QACH_STASA (O87868) Quaternary ammonium compound-resistance protein qacH| (Quarternary ammonium determinant H) Length = 107 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%) Frame = +1 Query: 193 KSTEGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAA-----GCVIETVYIIMYLVY 357 KS++GF + + + L FY L KT + L + I A G V+ T I+ L++ Sbjct: 21 KSSDGFSKLYPTITTIISFLICFYFLSKTMQHLPLNITYASWAGLGLVLTT--IVSVLIF 78 Query: 358 APRKAKIFTAKIVLLLNIAGFGLIFVLTLFAFH 456 + I I+L++ FG++ + T + H Sbjct: 79 KEQINLISIISIILII----FGVVLLNTFGSSH 107
>KCNB2_CANFA (Q95167) Potassium voltage-gated channel subfamily B member 2| (Voltage-gated potassium channel subunit Kv2.2) (Fragment) Length = 809 Score = 29.3 bits (64), Expect = 7.8 Identities = 46/172 (26%), Positives = 66/172 (38%), Gaps = 21/172 (12%) Frame = +1 Query: 85 LSMEHPWAFTFGLLGNVISFSSLLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLWI-- 258 LS + W F G L NVI ++L T + +KS FQ+V VV +F M + Sbjct: 253 LSSPNKWKFFKGPL-NVIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRI 311 Query: 259 ------FYALVKTGEGLLITINAAGCVI----ETVYIIMYLVYAPRK---AKIFTA---- 387 L G L + N G +I + I LV+ K A FT+ Sbjct: 312 LKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEKDADATKFTSIPAS 371 Query: 388 --KIVLLLNIAGFGLIFVLTLFAFHGETRVVSLGWICVGFSVCVFVAPLSII 537 + + G+G I+ TL S+G +C V V P+ II Sbjct: 372 FWWATITMTTVGYGDIYPKTLLG-------KSVGGLCCIAGVLVIALPIPII 416
>DAPA_SYMTH (Q67P59) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)| Length = 293 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +3 Query: 156 GPDTNILPDLQEQIHGGVPVGALCRGPIQRDAVDLLRAGQDRR 284 G D N+LP L +G + V + GP R+ +D AG R Sbjct: 188 GDDANLLPYLTVGAYGIISVASHVVGPQMRELIDAFLAGDTAR 230
>MA2A2_HUMAN (P49641) Alpha-mannosidase IIx (EC 3.2.1.114)| (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase) (MAN IIx) (Mannosidase alpha class 2A member 2) Length = 1139 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/50 (30%), Positives = 21/50 (42%) Frame = +2 Query: 77 WVAYPWSTLGHSPSAC*ATSSLSRASWPRYQHSTGSSRANPRRGSSRCPM 226 W +PW T G + S SWP T ++R PRR + P+ Sbjct: 868 WTYHPWWTSG----------TTSTRSWPCTSIQTSTARVQPRRYLKKLPL 907
>PDXT_CLOAB (Q97LG6) Glutamine amidotransferase subunit pdxT (EC 2.6.-.-)| (Glutamine amidotransferase glutaminase subunit pdxT) Length = 186 Score = 29.3 bits (64), Expect = 7.8 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +3 Query: 165 TNILPDLQEQIHGGVPVGALCRGPI 239 +N+L L+E+I+GG+PV C G I Sbjct: 58 SNMLQPLREKIYGGMPVWGTCAGMI 82
>CYB_HAPGR (Q34724) Cytochrome b| Length = 379 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = +1 Query: 19 PHCYTKFFASISLLYIFVTMGGLSMEHPWAFTFGLLGNVISFSSLLAPIP 168 P + F+ + L+I +GG +EHP+ T G + +++ FS +L +P Sbjct: 319 PLSQSVFWVLTADLFILTWIGGQPVEHPF-ITIGQMASILYFSLILIIMP 367
>COX1_ANOQU (P33504) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 514 Score = 29.3 bits (64), Expect = 7.8 Identities = 25/121 (20%), Positives = 57/121 (47%), Gaps = 7/121 (5%) Frame = +1 Query: 40 FASISLLYIFVTMGGLSMEHPWA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKST 201 F ++ ++Y + +G L WA FT G+ + ++ ++++ +PT +IF +T Sbjct: 267 FGNLGMIYAMLAIGLLGFI-VWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLAT 325 Query: 202 EGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKI 378 + Y A+ A ++F V G+++ ++ V+ +T Y++ + Y + Sbjct: 326 MHGTQLTYSPAMLWAFGFVFLFTVGGLTGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAV 385 Query: 379 F 381 F Sbjct: 386 F 386
>PUS3_YEAST (P31115) tRNA pseudouridine synthase 3 (EC 5.4.99.-) (tRNA-uridine| isomerase 3) (tRNA pseudouridylate synthase 3) (Depressed growth-rate protein DEG1) Length = 442 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -1 Query: 551 LITRPMMLRGATKTHTEKPTQIQPSETTRVSPWKAKRVRTKMSPK 417 LI R L A K H+EK I+ ++ ++S + R + K +PK Sbjct: 38 LIRRITELENANKPHSEKFQHIEDNKKRKISQEEVTRSKAKKAPK 82
>FUR4_YEAST (P05316) Uracil permease| Length = 633 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 6/64 (9%) Frame = +1 Query: 70 VTMGGLSMEHP------WAFTFGLLGNVISFSSLLAPIPTFYRIFKSKSTEGFQSVPYVV 231 + +G L+ P WAF L+G + +FS+++ P F R K+ ++ + + + Sbjct: 295 IALGSLTDVQPHGSAFSWAFLRSLMGCMANFSTMVINAPDFSRFSKNPNSALWSQLVCIP 354 Query: 232 ALFS 243 LFS Sbjct: 355 FLFS 358 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,080,540 Number of Sequences: 219361 Number of extensions: 1346908 Number of successful extensions: 4964 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 4836 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4962 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
