ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baald15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YL122_MIMIV (Q5UPJ9) Putative ankyrin repeat protein L122 30 4.0
2SID2_USTMA (O43103) Ferrichrome siderophore peptide synthetase (... 29 8.8

>YL122_MIMIV (Q5UPJ9) Putative ankyrin repeat protein L122|
          Length = 627

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 11/53 (20%), Positives = 29/53 (54%)
 Frame = +2

Query: 341 LNMLGSIIFLLVIPILPTVVAYSSTISHSNLWNISSMQSIVPMARNSSALVIL 499
           +N+ G+  F  ++P++  ++ Y + I+  N  N++ +   V  A+N   + ++
Sbjct: 306 MNIFGNNYFDYIVPVIQIMLDYGADINDKNNNNVTVLMMAVKFAKNDKNMTVI 358



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>SID2_USTMA (O43103) Ferrichrome siderophore peptide synthetase (EC 6.-.-.-)|
          Length = 3947

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 525  SWYEALPLSRMTRALEFRAIGTMLCILDM 439
            SW   LP +R +R L+  +IG  +C+++M
Sbjct: 2666 SWERILPFTRTSRFLQLASIGFDVCLIEM 2694


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,218,012
Number of Sequences: 219361
Number of extensions: 1629983
Number of successful extensions: 3722
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3722
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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