ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalc24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507049.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.36-2 mRNA Length = 1298 Score = 311 bits (157), Expect = 1e-81 Identities = 376/449 (83%) Strand = Plus / Plus Query: 56 agctttggagtggtgggatggccaccaataagaacattcaggatgaacagcctgttcggc 115 |||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 444 agctttggagtggtgggatggccaccgatccgacagttcaggatgaacagcctgttcaat 503 Query: 116 caggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctggc 175 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 504 caggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctgat 563 Query: 176 tcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggtg 235 |||||| ||||||||||||||||| ||||| || ||||| | || |||||||||||| Sbjct: 564 gtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggtg 623 Query: 236 aacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaag 295 ||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| |||||| Sbjct: 624 aacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaag 683 Query: 296 acccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttct 355 |||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 684 acccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttct 743 Query: 356 aatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatgaa 415 || ||| || || |||| || ||||||||||| | ||||||||| | || || || Sbjct: 744 cataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacgag 803 Query: 416 gacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttggctcc 475 ||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||| Sbjct: 804 gacagggatggtgactggatgctcgttggagatgttccttgggaaatgtttgtcagctct 863 Query: 476 gtgaagaggctaaggatcatgaggacatc 504 ||||||||| | ||||||||||||||||| Sbjct: 864 gtgaagaggttgaggatcatgaggacatc 892
>ref|XM_468410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1175 Score = 311 bits (157), Expect = 1e-81 Identities = 376/449 (83%) Strand = Plus / Plus Query: 56 agctttggagtggtgggatggccaccaataagaacattcaggatgaacagcctgttcggc 115 |||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 405 agctttggagtggtgggatggccaccgatccgacagttcaggatgaacagcctgttcaat 464 Query: 116 caggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctggc 175 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 465 caggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctgat 524 Query: 176 tcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggtg 235 |||||| ||||||||||||||||| ||||| || ||||| | || |||||||||||| Sbjct: 525 gtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggtg 584 Query: 236 aacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaag 295 ||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| |||||| Sbjct: 585 aacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaag 644 Query: 296 acccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttct 355 |||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 645 acccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttct 704 Query: 356 aatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatgaa 415 || ||| || || |||| || ||||||||||| | ||||||||| | || || || Sbjct: 705 cataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacgag 764 Query: 416 gacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttggctcc 475 ||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||| Sbjct: 765 gacagggatggtgactggatgctcgttggagatgttccttgggaaatgtttgtcagctct 824 Query: 476 gtgaagaggctaaggatcatgaggacatc 504 ||||||||| | ||||||||||||||||| Sbjct: 825 gtgaagaggttgaggatcatgaggacatc 853
>ref|XM_468411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1180 Score = 311 bits (157), Expect = 1e-81 Identities = 376/449 (83%) Strand = Plus / Plus Query: 56 agctttggagtggtgggatggccaccaataagaacattcaggatgaacagcctgttcggc 115 |||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 410 agctttggagtggtgggatggccaccgatccgacagttcaggatgaacagcctgttcaat 469 Query: 116 caggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctggc 175 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 470 caggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctgat 529 Query: 176 tcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggtg 235 |||||| ||||||||||||||||| ||||| || ||||| | || |||||||||||| Sbjct: 530 gtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggtg 589 Query: 236 aacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaag 295 ||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| |||||| Sbjct: 590 aacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaag 649 Query: 296 acccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttct 355 |||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 650 acccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttct 709 Query: 356 aatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatgaa 415 || ||| || || |||| || ||||||||||| | ||||||||| | || || || Sbjct: 710 cataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacgag 769 Query: 416 gacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttggctcc 475 ||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||| Sbjct: 770 gacagggatggtgactggatgctcgttggagatgttccttgggaaatgtttgtcagctct 829 Query: 476 gtgaagaggctaaggatcatgaggacatc 504 ||||||||| | ||||||||||||||||| Sbjct: 830 gtgaagaggttgaggatcatgaggacatc 858
>dbj|AK104802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C05, full insert sequence Length = 1175 Score = 311 bits (157), Expect = 1e-81 Identities = 376/449 (83%) Strand = Plus / Plus Query: 56 agctttggagtggtgggatggccaccaataagaacattcaggatgaacagcctgttcggc 115 |||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 405 agctttggagtggtgggatggccaccgatccgacagttcaggatgaacagcctgttcaat 464 Query: 116 caggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctggc 175 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 465 caggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctgat 524 Query: 176 tcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggtg 235 |||||| ||||||||||||||||| ||||| || ||||| | || |||||||||||| Sbjct: 525 gtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggtg 584 Query: 236 aacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaag 295 ||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| |||||| Sbjct: 585 aacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaag 644 Query: 296 acccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttct 355 |||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 645 acccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttct 704 Query: 356 aatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatgaa 415 || ||| || || |||| || ||||||||||| | ||||||||| | || || || Sbjct: 705 cataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacgag 764 Query: 416 gacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttggctcc 475 ||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||| Sbjct: 765 gacagggatggtgactggatgctcgttggagatgttccttgggaaatgtttgtcagctct 824 Query: 476 gtgaagaggctaaggatcatgaggacatc 504 ||||||||| | ||||||||||||||||| Sbjct: 825 gtgaagaggttgaggatcatgaggacatc 853
>dbj|AK104501.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E07, full insert sequence Length = 1180 Score = 311 bits (157), Expect = 1e-81 Identities = 376/449 (83%) Strand = Plus / Plus Query: 56 agctttggagtggtgggatggccaccaataagaacattcaggatgaacagcctgttcggc 115 |||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 410 agctttggagtggtgggatggccaccgatccgacagttcaggatgaacagcctgttcaat 469 Query: 116 caggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctggc 175 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 470 caggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctgat 529 Query: 176 tcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggtg 235 |||||| ||||||||||||||||| ||||| || ||||| | || |||||||||||| Sbjct: 530 gtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggtg 589 Query: 236 aacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaag 295 ||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| |||||| Sbjct: 590 aacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaag 649 Query: 296 acccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttct 355 |||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 650 acccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttct 709 Query: 356 aatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatgaa 415 || ||| || || |||| || ||||||||||| | ||||||||| | || || || Sbjct: 710 cataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacgag 769 Query: 416 gacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttggctcc 475 ||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||| Sbjct: 770 gacagggatggtgactggatgctcgttggagatgttccttgggaaatgtttgtcagctct 829 Query: 476 gtgaagaggctaaggatcatgaggacatc 504 ||||||||| | ||||||||||||||||| Sbjct: 830 gtgaagaggttgaggatcatgaggacatc 858
>dbj|AK069892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039N11, full insert sequence Length = 1298 Score = 311 bits (157), Expect = 1e-81 Identities = 376/449 (83%) Strand = Plus / Plus Query: 56 agctttggagtggtgggatggccaccaataagaacattcaggatgaacagcctgttcggc 115 |||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 444 agctttggagtggtgggatggccaccgatccgacagttcaggatgaacagcctgttcaat 503 Query: 116 caggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctggc 175 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 504 caggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctgat 563 Query: 176 tcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggtg 235 |||||| ||||||||||||||||| ||||| || ||||| | || |||||||||||| Sbjct: 564 gtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggtg 623 Query: 236 aacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaag 295 ||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| |||||| Sbjct: 624 aacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaag 683 Query: 296 acccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttct 355 |||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 684 acccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttct 743 Query: 356 aatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatgaa 415 || ||| || || |||| || ||||||||||| | ||||||||| | || || || Sbjct: 744 cataatacaaactcgctgaaactactagacaactctgccgaataccagctcacctacgag 803 Query: 416 gacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttggctcc 475 ||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||| Sbjct: 804 gacagggatggtgactggatgctcgttggagatgttccttgggaaatgtttgtcagctct 863 Query: 476 gtgaagaggctaaggatcatgaggacatc 504 ||||||||| | ||||||||||||||||| Sbjct: 864 gtgaagaggttgaggatcatgaggacatc 892
>emb|AJ748648.1| Oryza sativa (indica cultivar-group) mRNA for indoleacetic acid-inducible protein homologue Length = 882 Score = 264 bits (133), Expect = 3e-67 Identities = 369/449 (82%), Gaps = 9/449 (2%) Strand = Plus / Plus Query: 56 agctttggagtggtgggatggccaccaataagaacattcaggatgaacagcctgttcggc 115 |||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 320 agctttggagtggtgggatggccaccgatccgacagttcaggatgaacagcctgttcaat 379 Query: 116 caggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctggc 175 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 380 caggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctgat 439 Query: 176 tcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggtg 235 |||||| ||||||||||||||||| ||||| || ||||| | || |||||||||||| Sbjct: 440 gtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggtg 499 Query: 236 aacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaag 295 ||||||||||| ||||||||||| ||||| ||| || |||||||| |||||| Sbjct: 500 aacatggatggagaggtcattggaaggaa---------caatgcgcaccgctcatacaag 550 Query: 296 acccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttct 355 |||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 551 acccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttct 610 Query: 356 aatggtacgaagtccttgaagctgttagacaactcttctgaataccagatgacatatgaa 415 || ||| ||||| |||| || ||||||||||| | ||||||||| | || || || Sbjct: 611 cataatacaaagtcgctgaaactactagacaactctgccgaataccagctcacctacgag 670 Query: 416 gacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttggctcc 475 ||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||| Sbjct: 671 gacagggatggtgactggatgctcgttggagatgttccttgggaaatgtttgtcagctct 730 Query: 476 gtgaagaggctaaggatcatgaggacatc 504 ||||||||| | ||||||||||||||||| Sbjct: 731 gtgaagaggttgaggatcatgaggacatc 759
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 214 bits (108), Expect = 2e-52 Identities = 252/300 (84%) Strand = Plus / Minus Query: 56 agctttggagtggtgggatggccaccaataagaacattcaggatgaacagcctgttcggc 115 |||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 35093314 agctttggagtggtgggatggccaccgatccgacagttcaggatgaacagcctgttcaat 35093255 Query: 116 caggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctggc 175 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 35093254 caggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctgat 35093195 Query: 176 tcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggtg 235 |||||| ||||||||||||||||| ||||| || ||||| | || |||||||||||| Sbjct: 35093194 gtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggtg 35093135 Query: 236 aacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaag 295 ||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| |||||| Sbjct: 35093134 aacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaag 35093075 Query: 296 acccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttct 355 |||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 35093074 acccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttct 35093015 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 381 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 440 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 35092740 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 35092681 Query: 441 ttggagacgtcccttggga 459 ||||||| || |||||||| Sbjct: 35092680 ttggagatgttccttggga 35092662 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 460 aatgtttgttggctccgtgaagaggctaaggatcatgaggacatc 504 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 35092531 aatgtttgtcagctctgtgaagaggttgaggatcatgaggacatc 35092487
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 214 bits (108), Expect = 2e-52 Identities = 252/300 (84%) Strand = Plus / Minus Query: 56 agctttggagtggtgggatggccaccaataagaacattcaggatgaacagcctgttcggc 115 |||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 153655 agctttggagtggtgggatggccaccgatccgacagttcaggatgaacagcctgttcaat 153596 Query: 116 caggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctggc 175 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 153595 caggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctgat 153536 Query: 176 tcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggtg 235 |||||| ||||||||||||||||| ||||| || ||||| | || |||||||||||| Sbjct: 153535 gtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggtg 153476 Query: 236 aacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaag 295 ||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| |||||| Sbjct: 153475 aacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaag 153416 Query: 296 acccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttct 355 |||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 153415 acccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttct 153356 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 381 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 440 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 153081 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 153022 Query: 441 ttggagacgtcccttggga 459 ||||||| || |||||||| Sbjct: 153021 ttggagatgttccttggga 153003 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 460 aatgtttgttggctccgtgaagaggctaaggatcatgaggacatc 504 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 152872 aatgtttgtcagctctgtgaagaggttgaggatcatgaggacatc 152828
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 214 bits (108), Expect = 2e-52 Identities = 252/300 (84%) Strand = Plus / Minus Query: 56 agctttggagtggtgggatggccaccaataagaacattcaggatgaacagcctgttcggc 115 |||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 66477 agctttggagtggtgggatggccaccgatccgacagttcaggatgaacagcctgttcaat 66418 Query: 116 caggccaaagacaatgcctcggaggccgaaaccaagaaggccgccgccgatgactctggc 175 ||||| ||||| || | || || |||| ||||||||| ||||| || |||| |||| Sbjct: 66417 caggctaaagaaaacacatctgaaaccgacaccaagaagaccgccaccaatgaatctgat 66358 Query: 176 tcgcagaaagacaaggaggagggcgagaagaagggccgggtgccagggtgggtgaaggtg 235 |||||| ||||||||||||||||| ||||| || ||||| | || |||||||||||| Sbjct: 66357 gtgcagaaggacaaggaggagggcgaaaagaaaggacgggttgctggatgggtgaaggtg 66298 Query: 236 aacatggatggggaggtcattgggaggaaggtggacctcaacgcccaccgctcgtacaag 295 ||||||||||| ||||||||||| ||||||||||| ||||| || |||||||| |||||| Sbjct: 66297 aacatggatggagaggtcattggaaggaaggtggatctcaatgcgcaccgctcatacaag 66238 Query: 296 acccttgccttggcccttgagatcatgttcaccaagccgtccgccggcctttgcgcttct 355 |||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct: 66237 acccttgcattagcccttgaactcatgttcacgaagccgtccattggcctttgcgcttct 66178 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 381 tagacaactcttctgaataccagatgacatatgaagacagggatggtgactggatgcttg 440 ||||||||||| | ||||||||| | || || || ||||||||||||||||||||||| | Sbjct: 65903 tagacaactctgccgaataccagctcacctacgaggacagggatggtgactggatgctcg 65844 Query: 441 ttggagacgtcccttggga 459 ||||||| || |||||||| Sbjct: 65843 ttggagatgttccttggga 65825 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 460 aatgtttgttggctccgtgaagaggctaaggatcatgaggacatc 504 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 65694 aatgtttgtcagctctgtgaagaggttgaggatcatgaggacatc 65650
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 |||||||| | |||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 688 tatgaagataaggatggtgactggatgcttgttggtgacgtcccatgggagatgtttgtt 747 Query: 470 gg 471 || Sbjct: 748 gg 749
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 413 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttg 470 ||||||| |||||| |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 632 gaagacaaggatggagactggatgcttgttggagacgtcccatgggagatgtttgttg 689
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 |||||||||| ||||||||||||||||||||||||||| ||||| ||| | |||||||| Sbjct: 662 tatgaagacaaggatggtgactggatgcttgttggagatgtcccgtggcagatgtttgt 720
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 |||||||||| ||||||||||||||||||||||||||| ||||| ||| | |||||||| Sbjct: 714 tatgaagacaaggatggtgactggatgcttgttggagatgtcccgtggcagatgtttgt 772
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 |||||||||| ||||||||||||||||||||||||||| ||||| ||| | |||||||| Sbjct: 724 tatgaagacaaggatggtgactggatgcttgttggagatgtcccgtggcagatgtttgt 782
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 |||||||||| ||||||||||||||||||||||||||| ||||| ||| | |||||||| Sbjct: 719 tatgaagacaaggatggtgactggatgcttgttggagatgtcccgtggcagatgtttgt 777
>dbj|D14413.1|VIRAUX22B Vigna radiata auxin-regulated mRNA Length = 1165 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||| |||||||||||||||||| |||||||| || || ||||| |||||| Sbjct: 521 acatatgaagacaaggatggtgactggatgctagttggagatgtaccatgggacatgttt 580 Query: 467 gt 468 || Sbjct: 581 gt 582
>gb|J03920.1|SOYAUX22 Soybean auxin-regulated protein (Aux22) mRNA, complete cds Length = 1945 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 1320 gatggtgattggatgcttgttggagatgtcccttgggaaatgttt 1364
>ref|XM_469685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtccc 453 |||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 717 tatgaagacaaggatggtgactggatgcttgttggagatgtccc 760
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtccc 453 |||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 30188911 tatgaagacaaggatggtgactggatgcttgttggagatgtccc 30188868
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtccc 453 |||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 34984 tatgaagacaaggatggtgactggatgcttgttggagatgtccc 35027
>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein, exons 1-5 Length = 4539 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtccc 453 |||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 3909 tatgaagacaaggatggtgactggatgcttgttggagatgtccc 3952
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtccc 453 |||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 30280333 tatgaagacaaggatggtgactggatgcttgttggagatgtccc 30280290
>dbj|AP006634.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT15O18, TM0086, complete sequence Length = 133572 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 |||||||||| |||||||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 27148 tatgaagacaaggatggtgactggatgctagttggagatgttccatgggagatgtttgt 27206
>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds Length = 943 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 413 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttg 470 ||||||| |||||| ||||||||||||||||| || || |||||||| |||||||||| Sbjct: 637 gaagacaaggatggagactggatgcttgttggtgatgtaccttgggagatgtttgttg 694
>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds Length = 478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 ||||| |||| ||||||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 238 tatgaggacaaggatggtgactggatgcttgtcggtgatgtcccatgggagatgtttgtt 297 Query: 470 g 470 | Sbjct: 298 g 298
>gb|AY137964.1| Mirabilis jalapa clone MSR-193 Aux/IAA4 mRNA, partial cds Length = 157 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgt 464 |||| ||||| |||| |||||| |||||||||||||||||||| ||||| ||||| |||| Sbjct: 8 tgacctatgaggacaaggatggcgactggatgcttgttggagatgtcccctgggagatgt 67 Query: 465 t 465 | Sbjct: 68 t 68
>gb|AY289600.1| Pinus taeda auxin-induced protein 1 (IAA1) mRNA, complete cds Length = 1209 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 |||||||||| |||||| |||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 610 tatgaagacaaggatggagactggatgcttgtaggcgatgtcccctgggatatgtttgtt 669 Query: 470 g 470 | Sbjct: 670 g 670
>gb|AY962829.1| Prunus armeniaca auxin-induced protein mRNA, partial cds Length = 364 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 |||||||||| ||||| ||||||||||| || ||||||||||||||||| |||||| Sbjct: 91 tatgaagacaaagatggagactggatgctagtgggagacgtcccttgggagatgttt 147
>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds Length = 1784 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 ||||| |||| ||||||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 1088 tatgaggacaaggatggtgactggatgcttgtcggtgatgtcccatgggagatgtttgtt 1147 Query: 470 g 470 | Sbjct: 1148 g 1148
>dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds Length = 1187 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 |||||||||| |||||||| ||||||||||||||||| || || ||||| ||||||||| Sbjct: 675 tatgaagacaaagatggtgattggatgcttgttggagatgttccgtgggagatgtttgtt 734 Query: 470 g 470 | Sbjct: 735 g 735
>ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription factor AT3G04730 (IAA16) mRNA, complete cds Length = 1279 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 746 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 805 Query: 467 gttg 470 |||| Sbjct: 806 gttg 809
>ref|NM_119052.2| Arabidopsis thaliana PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor AT4G29080 (PAP2) mRNA, complete cds Length = 1227 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 64 agtggtgggatggccaccaataagaacattcaggatgaac 103 ||||||||||||||||||||||||| ||||||||| |||| Sbjct: 434 agtggtgggatggccaccaataagatcattcaggaagaac 473 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 426 gtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 790 gtgactggatgctggtcggagatgtcccttgggaaatgttt 830
>ref|NM_123736.2| Arabidopsis thaliana ATAUX2-11; transcription factor AT5G43700 (ATAUX2-11) mRNA, complete cds Length = 1168 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 |||||||||| |||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 665 tatgaagacaaagatggtgattggatgcttgttggtgatgttccttgggagatgtttgtt 724
>gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, complete cds Length = 711 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 559 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 618 Query: 467 gttg 470 |||| Sbjct: 619 gttg 622
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 64 agtggtgggatggccaccaataagaacattcaggatgaac 103 ||||||||||||||||||||||||| ||||||||| |||| Sbjct: 52761 agtggtgggatggccaccaataagatcattcaggaagaac 52722 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 426 gtgactggatgcttgttggagacgtcccttggga 459 ||||||||||||| || ||||| ||||||||||| Sbjct: 52325 gtgactggatgctggtcggagatgtcccttggga 52292
>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project) Length = 97714 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 64 agtggtgggatggccaccaataagaacattcaggatgaac 103 ||||||||||||||||||||||||| ||||||||| |||| Sbjct: 77792 agtggtgggatggccaccaataagatcattcaggaagaac 77753 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 426 gtgactggatgcttgttggagacgtcccttggga 459 ||||||||||||| || ||||| ||||||||||| Sbjct: 77356 gtgactggatgctggtcggagatgtcccttggga 77323
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 64 agtggtgggatggccaccaataagaacattcaggatgaac 103 ||||||||||||||||||||||||| ||||||||| |||| Sbjct: 36288 agtggtgggatggccaccaataagatcattcaggaagaac 36249 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 426 gtgactggatgcttgttggagacgtcccttggga 459 ||||||||||||| || ||||| ||||||||||| Sbjct: 35852 gtgactggatgctggtcggagatgtcccttggga 35819
>gb|AY133516.1| Arabidopsis thaliana At4g29080/F19B15_110 mRNA, complete cds Length = 918 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 64 agtggtgggatggccaccaataagaacattcaggatgaac 103 ||||||||||||||||||||||||| ||||||||| |||| Sbjct: 429 agtggtgggatggccaccaataagatcattcaggaagaac 468 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 426 gtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 785 gtgactggatgctggtcggagatgtcccttgggaaatgttt 825
>gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, complete cds Length = 1261 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 742 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 801 Query: 467 gttg 470 |||| Sbjct: 802 gttg 805
>dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced protein, complete cds, clone: RAFL22-51-M14 Length = 519 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 99 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 158 Query: 467 gttg 470 |||| Sbjct: 159 gttg 162
>gb|AY053404.1| Arabidopsis thaliana AT4g29080/F19B15_110 mRNA, complete cds Length = 1189 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 64 agtggtgggatggccaccaataagaacattcaggatgaac 103 ||||||||||||||||||||||||| ||||||||| |||| Sbjct: 434 agtggtgggatggccaccaataagatcattcaggaagaac 473 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 426 gtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 790 gtgactggatgctggtcggagatgtcccttgggaaatgttt 830
>gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induced protein IAA16 (At3g04730) mRNA, complete cds Length = 711 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 559 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 618 Query: 467 gttg 470 |||| Sbjct: 619 gttg 622
>gb|AF332402.1| Arabidopsis thaliana clone C00024 (f) putative phytochrome-associated protein 2 (At4g29080) mRNA, complete cds Length = 918 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 64 agtggtgggatggccaccaataagaacattcaggatgaac 103 ||||||||||||||||||||||||| ||||||||| |||| Sbjct: 429 agtggtgggatggccaccaataagatcattcaggaagaac 468 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 426 gtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 785 gtgactggatgctggtcggagatgtcccttgggaaatgttt 825
>emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZF01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 701 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 760 Query: 467 gttg 470 |||| Sbjct: 761 gttg 764
>emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1234 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 730 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 789 Query: 467 gttg 470 |||| Sbjct: 790 gttg 793
>gb|BT005853.1| Arabidopsis thaliana At5g43700 gene, complete cds Length = 561 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 |||||||||| |||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 433 tatgaagacaaagatggtgattggatgcttgttggtgatgttccttgggagatgtttgtt 492
>gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete sequence Length = 1140 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 746 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 805 Query: 467 gttg 470 |||| Sbjct: 806 gttg 809
>emb|AJ458326.1|ATH458326 Arabidopsis thaliana mRNA for putative auxin-induced protein 27 (iaa27 gene) Length = 918 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 64 agtggtgggatggccaccaataagaacattcaggatgaac 103 ||||||||||||||||||||||||| ||||||||| |||| Sbjct: 429 agtggtgggatggccaccaataagatcattcaggaagaac 468 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 426 gtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 785 gtgactggatgctggtcggagatgtcccttgggaaatgttt 825
>gb|AF087936.1|AF087936 Arabidopsis thaliana phytochrome-associated protein 2 (PAP2) mRNA, complete cds Length = 1090 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 64 agtggtgggatggccaccaataagaacattcaggatgaac 103 ||||||||||||||||||||||||| ||||||||| |||| Sbjct: 429 agtggtgggatggccaccaataagatcattcaggaagaac 468 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 426 gtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 785 gtgactggatgctggtcggagatgtcccttgggaaatgttt 825
>gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (IAA16) mRNA, complete cds Length = 1169 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 725 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtgggagatgttt 784 Query: 467 gttg 470 |||| Sbjct: 785 gttg 788
>dbj|D14412.1|VIRAUX22A Vigna radiata auxin-regulated mRNA Length = 838 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 |||||||||||||||||||||||||| || || ||||||||||| Sbjct: 497 gatggtgactggatgcttgttggagatgtgccatgggaaatgtt 540
>gb|L15450.1|ATHIAA4A Arabidopsis thaliana auxin-responsive protein (IAA4) mRNA, 5' partial cds Length = 558 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 |||||||||| |||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 433 tatgaagacaaagatggtgattggatgcttgttggtgatgttccttgggagatgtttgtt 492
>ref|NM_113205.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2); transcription factor AT3G23050 (IAA7) transcript variant AT3G23050.1 mRNA, complete cds Length = 1196 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 649 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 695
>gb|BT012096.1| Arabidopsis thaliana At3g23050 mRNA sequence Length = 732 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 592 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 638
>gb|AY072461.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 782 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 592 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 638
>gb|AY054651.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 935 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 647 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 693
>gb|AF332395.1| Arabidopsis thaliana clone C00014 (o) indoleacetic acid-inducible protein IAA7 (At3g23050) mRNA, complete cds Length = 732 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 592 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 638
>emb|BX825560.1|CNS0A534 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 590 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 636
>gb|AY087765.1| Arabidopsis thaliana clone 38286 mRNA, complete sequence Length = 1195 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 649 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 695
>gb|AF123507.1| Nicotiana tabacum Nt-iaa4.5 deduced protein mRNA, complete cds Length = 993 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 ||||||||||||| ||||||||| |||||||| |||||||| || || ||||| ||||| Sbjct: 553 acatatgaagacaaggatggtgattggatgctagttggagatgtaccatgggatatgtt 611
>emb|AJ306828.1|PTR306828 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA5 gene) Length = 1251 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 ||||| |||| |||||| || ||||||||||| ||||| || ||||||| |||||| || Sbjct: 780 tatgaggacaaggatggggattggatgcttgtcggagatgttccttgggggatgtttatt 839 Query: 470 ggctccgtgaagaggctaaggatcatgagga 500 |||| |||||||| || || |||||||||| Sbjct: 840 agctctgtgaagagactcagaatcatgagga 870
>dbj|AK106192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E03, full insert sequence Length = 1249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgt 464 |||| |||||||||| |||||| ||||||||||||||||| || || || ||||| |||| Sbjct: 725 tgacttatgaagacaaggatggagactggatgcttgttggcgatgttccatgggagatgt 784 Query: 465 ttg 467 ||| Sbjct: 785 ttg 787
>dbj|AK105936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B07, full insert sequence Length = 1240 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgt 464 |||| |||||||||| |||||| ||||||||||||||||| || || || ||||| |||| Sbjct: 716 tgacttatgaagacaaggatggagactggatgcttgttggcgatgttccatgggagatgt 775 Query: 465 ttg 467 ||| Sbjct: 776 ttg 778
>dbj|AK102762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D08, full insert sequence Length = 1150 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgt 464 |||| |||||||||| |||||| ||||||||||||||||| || || || ||||| |||| Sbjct: 696 tgacttatgaagacaaggatggagactggatgcttgttggcgatgttccatgggagatgt 755 Query: 465 ttg 467 ||| Sbjct: 756 ttg 758
>dbj|AK069902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034K17, full insert sequence Length = 1306 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgt 464 |||| |||||||||| |||||| ||||||||||||||||| || || || ||||| |||| Sbjct: 782 tgacttatgaagacaaggatggagactggatgcttgttggcgatgttccatgggagatgt 841 Query: 465 ttg 467 ||| Sbjct: 842 ttg 844
>gb|U18409.1|ATU18409 Arabidopsis thaliana IAA7 (IAA7) gene, complete cds Length = 899 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 ||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 614 gatggtgactggatgctcgttggcgatgtcccatgggaaatgtttgt 660
>ref|NM_125965.2| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.2 mRNA, complete cds Length = 1531 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||||||||||||||||| || || ||||| |||||| Sbjct: 1146 ggatggtgactggatgcttgttggagatgttccgtgggagatgttt 1191
>ref|NM_180944.1| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.1 mRNA, complete cds Length = 1537 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||||||||||||||||| || || ||||| |||||| Sbjct: 1146 ggatggtgactggatgcttgttggagatgttccgtgggagatgttt 1191
>gb|AY070451.1| Arabidopsis thaliana At5g65670 mRNA sequence Length = 1449 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||||||||||||||||| || || ||||| |||||| Sbjct: 1118 ggatggtgactggatgcttgttggagatgttccgtgggagatgttt 1163
>gb|AF334715.1| Arabidopsis thaliana clone C00016 (e) auxin-induced protein IAA9 (At5g65670) mRNA, complete cds Length = 1017 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||||||||||||||||| || || ||||| |||||| Sbjct: 873 ggatggtgactggatgcttgttggagatgttccgtgggagatgttt 918
>gb|AY087089.1| Arabidopsis thaliana clone 31563 mRNA, complete sequence Length = 1456 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||||||||||||||||| || || ||||| |||||| Sbjct: 1150 ggatggtgactggatgcttgttggagatgttccgtgggagatgttt 1195
>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds Length = 884 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 413 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttg 470 ||||||| ||||| ||||||||||||||||| || || |||||||| |||||||||| Sbjct: 595 gaagacaaagatggagactggatgcttgttggtgatgtaccttgggagatgtttgttg 652
>gb|U18411.1|ATU18411 Arabidopsis thaliana IAA9 (IAA9) gene, complete cds Length = 1425 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 ||||||||||||||||||||||||||| || || ||||| |||||| Sbjct: 1106 ggatggtgactggatgcttgttggagatgttccgtgggagatgttt 1151
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttggga 459 ||||||||||||||||| |||||||| ||||||||||| Sbjct: 57544 gatggtgactggatgctggttggagatgtcccttggga 57581
>dbj|AB004933.1| Vigna radiata mRNA for Aux22e, complete cds Length = 1006 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggaga 447 |||||||||| |||||||||||||||||| |||||||| Sbjct: 564 tatgaagacaaggatggtgactggatgctggttggaga 601
>ref|NM_101427.2| Arabidopsis thaliana IAA5; transcription factor AT1G15580 (IAA5) mRNA, complete cds Length = 591 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 409 atatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 ||||||||||| ||||| || |||||||||| |||||| || |||||||||||||| Sbjct: 381 atatgaagacaaagatggagattggatgcttgctggagatgttccttgggaaatgtt 437
>gb|AY150496.1| Arabidopsis thaliana putative auxin-induced protein IAA5 (At1g15580) mRNA, complete cds Length = 492 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 409 atatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 ||||||||||| ||||| || |||||||||| |||||| || |||||||||||||| Sbjct: 381 atatgaagacaaagatggagattggatgcttgctggagatgttccttgggaaatgtt 437
>gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regulated protein (IAA1) mRNA, complete cds Length = 1313 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 |||||||||| |||||| || ||||||||||| ||||| || || |||| |||||||||| Sbjct: 733 tatgaagacaaggatggagattggatgcttgtaggagatgttccatggggaatgtttgtt 792 Query: 470 g 470 | Sbjct: 793 g 793
>emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (clone pIAA6) Length = 702 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 |||||||| |||||||| |||||||| ||||||||||| |||||| Sbjct: 335 gatggtgattggatgctggttggagatgtcccttgggagatgttt 379
>dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A04, full insert sequence Length = 430 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 424 tggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 |||||||||||||||||||||||| ||||| ||| | |||||||| Sbjct: 1 tggtgactggatgcttgttggagatgtcccgtggcagatgtttgt 45
>gb|U18407.1|ATU18407 Arabidopsis thaliana IAA5 (IAA5) gene, partial cds Length = 577 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 409 atatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 ||||||||||| ||||| || |||||||||| |||||| || |||||||||||||| Sbjct: 367 atatgaagacaaagatggagattggatgcttgctggagatgttccttgggaaatgtt 423
>gb|DQ252491.1| Solanum tuberosum clone 060E03 Aux/IAA protein-like mRNA, complete cds Length = 1590 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 |||||||| | |||||| ||||||||||||||||| || || |||||||| |||||| Sbjct: 1038 tatgaagataaggatggggactggatgcttgttggtgatgtaccttgggagatgttt 1094
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatgcttgttgg 444 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 130307 tgacttatgaagacaaggatggagactggatgcttgttgg 130346
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatgcttgttgg 444 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 37496 tgacttatgaagacaaggatggagactggatgcttgttgg 37535
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatgcttgttgg 444 |||| |||||||||| |||||| ||||||||||||||||| Sbjct: 7852721 tgacttatgaagacaaggatggagactggatgcttgttgg 7852760 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 410 tatgaagacagggatggtgactggatgcttgttgg 444 |||||||||| ||||| |||||||||||||||||| Sbjct: 27627784 tatgaagacaaggatgctgactggatgcttgttgg 27627750
>gb|AF154652.1| Nicotiana tabacum clone PR39 mRNA sequence Length = 824 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 |||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 696 gatggtgactggatgcttgtcggtgatgtcccttgggagatgtt 739
>dbj|AB026822.1| Cucumis sativus CsIAA2 mRNA for Aux/IAA protein, complete cds Length = 1646 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 ||||||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 1163 gatggtgactggatgctcgttggtgatgtcccttgggagatgtt 1206
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 410 tatgaagacagggatggtgactggatgcttgttgg 444 |||||||||| ||||| |||||||||||||||||| Sbjct: 95060 tatgaagacaaggatgctgactggatgcttgttgg 95026
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 421 ggatggtgactggatgcttgttggaga 447 ||||||||||||||||||||||||||| Sbjct: 111881 ggatggtgactggatgcttgttggaga 111855
>emb|BX822145.1|CNS0A5ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1329 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 |||||| |||||||||| ||||| || ||||| |||||||||||||| Sbjct: 893 gatggtaactggatgctcgttggcgatgtcccatgggaaatgtttgt 939
>dbj|AK109363.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E12, full insert sequence Length = 1220 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttgg 444 |||||||||| ||||| |||||||||||||||||| Sbjct: 780 tatgaagacaaggatgctgactggatgcttgttgg 814
>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24 Length = 84440 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggaga 447 ||||||||||||||||||||||||||| Sbjct: 7924 ggatggtgactggatgcttgttggaga 7950
>dbj|AK106181.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D03, full insert sequence Length = 1261 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttgg 444 |||||||||| ||||| |||||||||||||||||| Sbjct: 821 tatgaagacaaggatgctgactggatgcttgttgg 855
>dbj|AK104018.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H11, full insert sequence Length = 1221 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttgg 444 |||||||||| ||||| |||||||||||||||||| Sbjct: 774 tatgaagacaaggatgctgactggatgcttgttgg 808
>dbj|AK099253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168H04, full insert sequence Length = 1209 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttgg 444 |||||||||| ||||| |||||||||||||||||| Sbjct: 769 tatgaagacaaggatgctgactggatgcttgttgg 803
>dbj|AK061439.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B11, full insert sequence Length = 1222 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttgg 444 |||||||||| ||||| |||||||||||||||||| Sbjct: 782 tatgaagacaaggatgctgactggatgcttgttgg 816
>ref|NM_192002.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 816 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttgg 444 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 664 acatatgaagataaggatgctgactggatgcttgttgg 701
>emb|AJ566558.1|TCA566558 Theobroma cacao microsatellite, clone mTcCIR237 Length = 208 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggaga 447 |||||||||| |||||| ||||||||||| |||||||| Sbjct: 45 tatgaagacaaggatggagactggatgctagttggaga 82
>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA, complete cds Length = 1228 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 |||||| ||||||||||||||||| || || |||||||| |||||| Sbjct: 780 ggatggagactggatgcttgttggggatgttccttgggagatgttt 825
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttgg 444 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 27772040 acatatgaagataaggatgctgactggatgcttgttgg 27772077 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 413 gaagacagggatggtgactggatgcttgttgg 444 ||||||| |||||||||||||||||| ||||| Sbjct: 7251178 gaagacaaggatggtgactggatgctggttgg 7251209 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gtggtgggatggccaccaat 84 |||||||||||||||||||| Sbjct: 7250049 gtggtgggatggccaccaat 7250068
>emb|BX826607.1|CNS0A46L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB46ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 501 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 429 actggatgcttgttggagacgtcccttgggaaatgttt 466 |||||||||| || ||||| |||||||||||||||||| Sbjct: 166 actggatgctggtcggagatgtcccttgggaaatgttt 203
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttgg 444 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 64095 acatatgaagataaggatgctgactggatgcttgttgg 64132
>dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD19 Length = 87286 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttggga 459 |||||||||| |||||||| |||||||||||||| || || |||||||| Sbjct: 5880 tatgaagacaaagatggtgattggatgcttgttggtgatgttccttggga 5929
>emb|X53435.1|ATAUX211 A.thaliana auxin-inducible gene Aux2-11 Length = 1776 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttggga 459 |||||||||| |||||||| |||||||||||||| || || |||||||| Sbjct: 1209 tatgaagacaaagatggtgattggatgcttgttggtgatgttccttggga 1258
>emb|X68218.1|PSIAA6D P.sativum gene for PS-IAA6 Length = 5923 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttggga 459 |||||||| |||||||| |||||||| ||||||||||| Sbjct: 4383 gatggtgattggatgctggttggagatgtcccttggga 4420
>dbj|AK106121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E11, full insert sequence Length = 1231 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttgg 444 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 751 acatatgaagataaggatgctgactggatgcttgttgg 788
>dbj|AK102396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092H03, full insert sequence Length = 971 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttgg 444 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 666 acatatgaagataaggatgctgactggatgcttgttgg 703
>dbj|AK061495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C06, full insert sequence Length = 1140 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttgg 444 ||||||||||| | ||||| |||||||||||||||||| Sbjct: 677 acatatgaagataaggatgctgactggatgcttgttgg 714
>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071, complete sequence Length = 69786 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttggga 459 |||||||| | |||||||||||||||||| || ||||| ||||| ||||| Sbjct: 23027 tatgaagataaggatggtgactggatgctcgtgggagatgtcccatggga 23076
>dbj|AB004932.1| Vigna radiata mRNA for Aux22d, complete cds Length = 936 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggaga 447 |||||||||| ||||||||||||||||| |||||||| Sbjct: 549 tatgaagacaaagatggtgactggatgctggttggaga 586
>dbj|AB004931.1| Vigna radiata mRNA for Aux22c, complete cds Length = 899 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 409 atatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 |||||| |||| ||||| ||||||||||| |||||||| || |||||||| |||||| Sbjct: 418 atatgaggacaaagatggcgactggatgctggttggagatgttccttgggagatgttt 475
>ref|NM_188615.1| Oryza sativa (japonica cultivar-group), Ozsa8218 predicted mRNA Length = 846 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 413 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 ||||||| |||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 700 gaagacaaggatggtgactggatgctggttggtgatgttccatgggagatgtt 752 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gtggtgggatggccaccaat 84 |||||||||||||||||||| Sbjct: 424 gtggtgggatggccaccaat 443
>gb|BT014412.1| Lycopersicon esculentum clone 133719R, mRNA sequence Length = 977 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgttg 470 ||||| |||||||||||||| ||||| || || ||| |||||||||||| Sbjct: 557 gatggagactggatgcttgtaggagatgttccatggaaaatgtttgttg 605
>gb|AC011437.6|ATAC011437 Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence Length = 95310 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttggga 459 ||||||||||| | ||||| |||||||||||||| |||||||| || ||||| Sbjct: 67674 acatatgaagataaagatggcgactggatgcttgtaggagacgtaccgtggga 67622
>gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, partial cds Length = 301 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 413 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 |||||||| || || || |||||||||||||| ||||| |||||||| ||||| Sbjct: 1 gaagacagagacggagattggatgcttgttggcgacgttccttgggagatgtt 53
>gb|AY289604.1| Pinus taeda auxin-induced protein 5 (IAA5) mRNA, complete cds Length = 1289 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 |||||||||| |||||| |||||||||||||| || || || || ||| | ||||||||| Sbjct: 730 tatgaagacaaggatggagactggatgcttgtaggcgatgttccatggcagatgtttgtt 789 Query: 470 g 470 | Sbjct: 790 g 790
>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA, complete cds Length = 1126 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 |||||||||| |||||| || ||||||||||| || || || ||||||| ||||||||| Sbjct: 598 tatgaagacaaggatggagattggatgcttgtcggtgatgttccttgggggatgtttgtt 657 Query: 470 g 470 | Sbjct: 658 g 658
>gb|AY090553.1| Zinnia elegans auxin-regulated protein (IAA8) mRNA, complete cds Length = 1499 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 ||||||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 1115 ggatggtgattggatgcttgttggagatgtaccatgggatatgtt 1159
>emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA7 gene) Length = 1178 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 |||||||| | ||| |||||||||||||| || || || ||||| ||||| ||||||||| Sbjct: 613 tatgaagataaggacggtgactggatgctcgtcggtgatgtcccatgggacatgtttgtt 672 Query: 470 g 470 | Sbjct: 673 g 673
>emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA6 gene) Length = 1206 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 410 tatgaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtttgtt 469 |||||||||| |||||| || ||||||||||| || || || || ||||| ||||||||| Sbjct: 889 tatgaagacaaggatggcgattggatgcttgtgggtgatgttccatgggagatgtttgtt 948 Query: 470 g 470 | Sbjct: 949 g 949
>emb|AJ417876.1|NTA417876 Nicotiana tabacum mRNA for IAA9 protein Length = 1675 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 |||||||||||||||||||| || || ||||| ||||| |||||| Sbjct: 1110 gatggtgactggatgcttgtcggtgatgtcccctgggagatgttt 1154
>dbj|AK104654.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C04, full insert sequence Length = 1209 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 413 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 ||||||| |||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 684 gaagacaaggatggtgactggatgctggttggtgatgttccatgggagatgtt 736 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gtggtgggatggccaccaat 84 |||||||||||||||||||| Sbjct: 408 gtggtgggatggccaccaat 427
>dbj|AK100080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001M24, full insert sequence Length = 1204 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 428 gactggatgcttgttggagacgtcccttgggaaatgtttgt 468 ||||||||||| || ||||||||||| ||| |||||||||| Sbjct: 655 gactggatgctcgtcggagacgtcccctggaaaatgtttgt 695
>dbj|AK072001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094L17, full insert sequence Length = 1291 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 413 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 ||||||| |||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 781 gaagacaaggatggtgactggatgctggttggtgatgttccatgggagatgtt 833 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gtggtgggatggccaccaat 84 |||||||||||||||||||| Sbjct: 507 gtggtgggatggccaccaat 526
>dbj|AK066156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054L16, full insert sequence Length = 1194 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 413 gaagacagggatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 ||||||| |||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 732 gaagacaaggatggtgactggatgctggttggtgatgttccatgggagatgtt 784 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gtggtgggatggccaccaat 84 |||||||||||||||||||| Sbjct: 456 gtggtgggatggccaccaat 475
>dbj|AK061796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G05, full insert sequence Length = 1201 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 428 gactggatgcttgttggagacgtcccttgggaaatgtttgt 468 ||||||||||| || ||||||||||| ||| |||||||||| Sbjct: 652 gactggatgctcgtcggagacgtcccctggaaaatgtttgt 692
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 413 gaagacagggatggtgactggatgcttgttgg 444 ||||||| |||||||||||||||||| ||||| Sbjct: 145826 gaagacaaggatggtgactggatgctggttgg 145857 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gtggtgggatggccaccaat 84 |||||||||||||||||||| Sbjct: 144697 gtggtgggatggccaccaat 144716
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 413 gaagacagggatggtgactggatgcttgttgg 444 ||||||| |||||||||||||||||| ||||| Sbjct: 52608 gaagacaaggatggtgactggatgctggttgg 52639 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gtggtgggatggccaccaat 84 |||||||||||||||||||| Sbjct: 51479 gtggtgggatggccaccaat 51498
>gb|AF123504.1|AF123504 Nicotiana tabacum Nt-iaa2.3 deduced protein mRNA, complete cds Length = 756 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 |||||||||| |||||||||||| || || |||||||| ||||| Sbjct: 476 gatggtgacttgatgcttgttggtgatgttccttgggatatgtt 519
>dbj|AB051384.1| Cucumis sativus mRNA, putative member of Aux/IAA gene family, partial cds Length = 375 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 ||||| || |||||||||||||| || ||||||||||| ||||| Sbjct: 20 gatggagattggatgcttgttggtgatgtcccttgggagatgtt 63
>gb|AC013453.1|AC013453 Arabidopsis thaliana chromosome I BAC T16N11 genomic sequence, complete sequence Length = 91001 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 409 atatgaagacagggatggtgactggatgcttgttggagacgtcccttggga 459 ||||||||||| ||||| || |||||||||| |||||| || |||||||| Sbjct: 69337 atatgaagacaaagatggagattggatgcttgctggagatgttccttggga 69287
>emb|X53436.1|ATAUX227 A.thaliana auxin-inducible Aux2-27 gene Length = 1815 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 409 atatgaagacagggatggtgactggatgcttgttggagacgtcccttggga 459 ||||||||||| ||||| || |||||||||| |||||| || |||||||| Sbjct: 921 atatgaagacaaagatggagattggatgcttgctggagatgttccttggga 971
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 428 gactggatgcttgttggagacgtcccttgggaaatgtttgttg 470 ||||||||||| || || |||||||| ||||| |||||||||| Sbjct: 955 gactggatgctcgtcggcgacgtcccatgggagatgtttgttg 997
>gb|AF169830.1|AF169830 Glycine max auxin-induced protein ali50 mRNA, partial cds Length = 731 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtttgt 468 ||||||||||||||||| || || || ||||| ||||| |||||||| Sbjct: 359 gatggtgactggatgctcgtgggtgatgtcccatgggagatgtttgt 405
>ref|NM_119006.3| Arabidopsis thaliana IAA11; transcription factor AT4G28640 (IAA11) mRNA, complete cds Length = 1108 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 gtgggatggccaccaataagaacattcaggatgaacag 105 |||||||||||||||||||| || | ||| |||||||| Sbjct: 421 gtgggatggccaccaataaggacttacagaatgaacag 458
>ref|NM_202626.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2) AT3G23050 (IAA7) transcript variant AT3G23050.2 mRNA, complete cds Length = 990 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttggga 459 ||||||||||||||||| ||||| || ||||| ||||| Sbjct: 649 gatggtgactggatgctcgttggcgatgtcccatggga 686
>gb|AC142103.3| Mus musculus BAC clone RP24-287E15 from chromosome 17, complete sequence Length = 175787 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 185 gacaaggaggagggcgagaagaaggg 210 |||||||||||||| ||||||||||| Sbjct: 123838 gacaaggaggagggagagaagaaggg 123813
>gb|BT013567.1| Lycopersicon esculentum clone 132305F, mRNA sequence Length = 1626 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 |||||| |||||||||||||| || || ||||| ||||| |||||| Sbjct: 1147 ggatggggactggatgcttgtcggtgatgtcccctgggagatgttt 1192
>gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete sequence Length = 207268 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 364 gaagtccttgaagctgttagacaact 389 ||||||||||||||||| |||||||| Sbjct: 151821 gaagtccttgaagctgtaagacaact 151796
>emb|AJ937282.1| Lycopersicon esculentum partial mRNA for Aux/IAA protein (iaa9 gene) Length = 1752 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 |||||| |||||||||||||| || || ||||| ||||| |||||| Sbjct: 1146 ggatggggactggatgcttgtcggtgatgtcccctgggagatgttt 1191
>gb|AY098938.1| Solanum tuberosum Aux/IAA protein mRNA, complete cds Length = 1589 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 |||||| |||||||||||||| || || || |||||||| |||||| Sbjct: 1112 ggatggggactggatgcttgtcggtgatgtaccttgggagatgttt 1157
>gb|BT000261.1| Arabidopsis thaliana early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 887 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 gtgggatggccaccaataagaacattcaggatgaacag 105 |||||||||||||||||||| || | ||| |||||||| Sbjct: 268 gtgggatggccaccaataaggacttacagaatgaacag 305
>emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 69 Length = 197655 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 gtgggatggccaccaataagaacattcaggatgaacag 105 |||||||||||||||||||| || | ||| |||||||| Sbjct: 63743 gtgggatggccaccaataaggacttacagaatgaacag 63780
>emb|AJ627256.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA8 auxin regulated transcriptional repressor (IAA8 gene) Length = 803 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttgg 444 |||||||| || | ||||| |||||||||||||||||| Sbjct: 654 acatatgaggataaggatgctgactggatgcttgttgg 691
>gb|DQ115325.1| Lycopersicon esculentum AUX/IAA protein (IAA4) mRNA, complete cds Length = 1707 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgttggagacgtcccttgggaaatgttt 466 |||||| |||||||||||||| || || ||||| ||||| |||||| Sbjct: 1147 ggatggggactggatgcttgtcggtgatgtcccctgggagatgttt 1192
>gb|AY099670.1| Arabidopsis thaliana early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 1091 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 gtgggatggccaccaataagaacattcaggatgaacag 105 |||||||||||||||||||| || | ||| |||||||| Sbjct: 407 gtgggatggccaccaataaggacttacagaatgaacag 444
>gb|AF332397.1| Arabidopsis thaliana clone C00018 (e) early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 741 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 gtgggatggccaccaataagaacattcaggatgaacag 105 |||||||||||||||||||| || | ||| |||||||| Sbjct: 268 gtgggatggccaccaataaggacttacagaatgaacag 305
>emb|BX828040.1|CNS0A2WQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH47ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1089 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 gtgggatggccaccaataagaacattcaggatgaacag 105 |||||||||||||||||||| || | ||| |||||||| Sbjct: 421 gtgggatggccaccaataaggacttacagaatgaacag 458
>gb|AY087635.1| Arabidopsis thaliana clone 37274 mRNA, complete sequence Length = 1403 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttggga 459 |||||||| |||||||||||||| || ||||| ||||| Sbjct: 1052 gatggtgattggatgcttgttggcgatgtcccatggga 1089
>dbj|AK118377.1| Arabidopsis thaliana At4g28640 mRNA for putative early auxin-inducible protein 11 (IAA11), complete cds, clone: RAFL19-64-E04 Length = 1093 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 gtgggatggccaccaataagaacattcaggatgaacag 105 |||||||||||||||||||| || | ||| |||||||| Sbjct: 407 gtgggatggccaccaataaggacttacagaatgaacag 444
>dbj|AB026655.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXC7 Length = 79284 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttggga 459 ||||||||||||||||| ||||| || ||||| ||||| Sbjct: 36787 gatggtgactggatgctcgttggcgatgtcccatggga 36824
>gb|U18413.1|ATU18413 Arabidopsis thaliana IAA11 (IAA11) gene, complete cds Length = 998 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 gtgggatggccaccaataagaacattcaggatgaacag 105 |||||||||||||||||||| || | ||| |||||||| Sbjct: 311 gtgggatggccaccaataaggacttacagaatgaacag 348
>gb|U24023.1|AEU24023 Aspidistra elatior 5.8S-26S rDNA internal transcribed spacer 2 (ITS2) Length = 223 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 ccgcgcccgccgcctccccggg 25 |||||||||||||||||||||| Sbjct: 53 ccgcgcccgccgcctccccggg 32
>ref|NM_116075.2| Arabidopsis thaliana IAA30; transcription factor AT3G62100 (IAA30) mRNA, complete cds Length = 731 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 425 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 474 ggtgactggatgatggttggagatgttccttgggagatgtt 514
>ref|NM_130267.3| Arabidopsis thaliana IAA20; transcription factor AT2G46990 (IAA20) mRNA, complete cds Length = 652 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 425 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 442 ggtgactggatgatggttggagatgttccttgggagatgtt 482
>ref|XM_450541.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1260 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctccc 21 ||||||||||||||||||||| Sbjct: 822 gccccgcgcccgccgcctccc 802
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 ccgcgcccgccgcctccccgg 24 ||||||||||||||||||||| Sbjct: 122981 ccgcgcccgccgcctccccgg 122961
>ref|XM_756140.1| Ustilago maydis 521 hypothetical protein (UM05086.1) partial mRNA Length = 5505 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 aggccgccgccgatgactctg 173 ||||||||||||||||||||| Sbjct: 890 aggccgccgccgatgactctg 910
>gb|AC121909.3| Mus musculus BAC clone RP24-179L9 from chromosome 5, complete sequence Length = 155771 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 cccgcgcccgccgcctccccg 23 ||||||||||||||||||||| Sbjct: 30948 cccgcgcccgccgcctccccg 30968
>gb|BC096526.1| Mus musculus cDNA clone IMAGE:30534447, **** WARNING: chimeric clone **** Length = 4332 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 cccgcgcccgccgcctccccg 23 ||||||||||||||||||||| Sbjct: 288 cccgcgcccgccgcctccccg 268
>ref|XM_776402.1| PREDICTED: Strongylocentrotus purpuratus similar to dentin sialophosphoprotein preproprotein (LOC576056), mRNA Length = 2850 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 aggaggagggcgagaagaagg 209 ||||||||||||||||||||| Sbjct: 1049 aggaggagggcgagaagaagg 1069
>dbj|AK140674.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930082J09 product:unclassifiable, full insert sequence Length = 2808 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 cccgcgcccgccgcctccccg 23 ||||||||||||||||||||| Sbjct: 402 cccgcgcccgccgcctccccg 382
>gb|AF348576.1| Arabidopsis thaliana clone C00049 (f) auxin-induced protein IAA20 (At2g46990) mRNA, complete cds Length = 528 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 425 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 436 ggtgactggatgatggttggagatgttccttgggagatgtt 476
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctccc 21 ||||||||||||||||||||| Sbjct: 9566865 gccccgcgcccgccgcctccc 9566845
>gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds Length = 1481 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 ggatggtgactggatgcttgt 441 ||||||||||||||||||||| Sbjct: 942 ggatggtgactggatgcttgt 962
>emb|BX822779.1|CNS0A64T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 732 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 425 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 474 ggtgactggatgatggttggagatgttccttgggagatgtt 514
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctccc 21 ||||||||||||||||||||| Sbjct: 6962 gccccgcgcccgccgcctccc 6942
>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0692F07 Length = 141544 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctccc 21 ||||||||||||||||||||| Sbjct: 130501 gccccgcgcccgccgcctccc 130481
>dbj|AK117233.1| Arabidopsis thaliana At2g46990 mRNA for putative auxin-induced protein, complete cds, clone: RAFL16-78-L02 Length = 644 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 425 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 442 ggtgactggatgatggttggagatgttccttgggagatgtt 482
>gb|U49076.1|ATU49076 Arabidopsis thaliana early auxin-induced (IAA20) mRNA, partial cds Length = 624 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 425 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 410 ggtgactggatgatggttggagatgttccttgggagatgtt 450
>gb|AY669801.1| Arabidopsis thaliana clone C105339 IAA30 (At3g62100) mRNA, complete cds Length = 550 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 425 ggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 |||||||||||| | |||||||| || |||||||| ||||| Sbjct: 430 ggtgactggatgatggttggagatgttccttgggagatgtt 470
>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b, complete sequence Length = 68747 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 414 aagacagggatggtgactggatgct 438 |||||| |||||||||||||||||| Sbjct: 4715 aagacaaggatggtgactggatgct 4691
>ref|NM_112640.2| Arabidopsis thaliana IAA31; transcription factor AT3G17600 (IAA31) mRNA, complete cds Length = 830 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatg 436 ||||||||||||||| |||||| || |||||| Sbjct: 470 tgacatatgaagacaaggatggagattggatg 501
>ref|NM_117535.4| Arabidopsis thaliana IAA14 (SOLITARY ROOT); transcription factor AT4G14550 (IAA14) mRNA, complete cds Length = 1482 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtccc 453 ||||||||||||||||| ||||| || ||||| Sbjct: 646 gatggtgactggatgctcgttggtgatgtccc 677
>ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2481 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 433 gatgcttgttggagacgtcccttgggaa 460 ||||||||||||||||| ||| |||||| Sbjct: 2238 gatgcttgttggagacgacccatgggaa 2265
>ref|XM_476878.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1164 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 434 atgcttgttggagacgtcccttgggaaatgtt 465 |||||||||||||| || || ||||||||||| Sbjct: 664 atgcttgttggagatgtgccctgggaaatgtt 695
>gb|AF334718.1| Arabidopsis thaliana IAA14 (At4g14550) mRNA, complete cds Length = 687 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtccc 453 ||||||||||||||||| ||||| || ||||| Sbjct: 550 gatggtgactggatgctcgttggtgatgtccc 581
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 ccagtcacagaaccgcagcc 556 |||||||||||||||||||| Sbjct: 26963 ccagtcacagaaccgcagcc 26944
>ref|XM_597378.2| PREDICTED: Bos taurus similar to H2.0-like homeo box 1 (LOC519165), mRNA Length = 1867 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 aaagacaaggaggagggcgagaag 205 ||||||||||||| |||||||||| Sbjct: 1433 aaagacaaggaggcgggcgagaag 1456
>gb|BC072412.1| Homo sapiens nasal embryonic LHRH factor, mRNA (cDNA clone MGC:90342 IMAGE:6165009), complete cds Length = 2988 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctcc 20 |||||||||||||||||||| Sbjct: 179 gccccgcgcccgccgcctcc 160
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 agaaggccgccgccgatgac 169 |||||||||||||||||||| Sbjct: 804788 agaaggccgccgccgatgac 804769
>ref|XM_386138.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05962.1) partial mRNA Length = 1236 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 acaaggaggagggcgagaag 205 |||||||||||||||||||| Sbjct: 1106 acaaggaggagggcgagaag 1125
>ref|XM_843316.1| PREDICTED: Canis familiaris similar to nasal embryonic LHRH factor, transcript variant 1 (LOC606797), mRNA Length = 2004 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctcc 20 |||||||||||||||||||| Sbjct: 145 gccccgcgcccgccgcctcc 126
>gb|AC148405.5| Medicago truncatula clone mth2-37m7, complete sequence Length = 115984 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 tgggtgaaggtgaacatggatggg 247 ||||||||||||||||| |||||| Sbjct: 46588 tgggtgaaggtgaacattgatggg 46565
>gb|AC138130.9| Medicago truncatula clone mth2-31d24, complete sequence Length = 146386 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 407 acatatgaagacagggatggtgactggatgcttgttggagacgtcccttggg 458 ||||||||||| | ||||| || ||||||||||| || ||||| ||||||| Sbjct: 34681 acatatgaagataaagatggagattggatgcttgtaggcgacgttccttggg 34732
>emb|AL031005.2|HS329E20 Human DNA sequence from clone RP3-329E20 on chromosome 1p34.4-36.13 Contains the 5' UTR of the EIF4G3 gene for eukaryotic translation initiation factor 4 gamma, 3, the 3' end of the ECE1 gene for endothelin converting enzyme 1, a novel gene and a CpG island, complete sequence Length = 109906 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ccccgcgcccgccgcctccccggg 25 |||||| ||||||||||||||||| Sbjct: 4499 ccccgctcccgccgcctccccggg 4476
>emb|AL365502.57| Human DNA sequence from clone RP11-48C7 on chromosome 9q34.2-34.3 Contains the gene for nasal embryonic luteinizing hormone-releasing hormone factor (DKFZP586J1624), a novel gene (FLJ31318), the MRPL41 gene for mitochondrial ribosomal protein L41 (RPML27, MRP-L270), a novel gene (LOC9271), the gene for melanin-concentrating hormone receptor 1 interacting zinc-finger protein (ZMYND17) (MIZIP), a novel gene (MGC40555), a novel protein and eleven CpG islands, complete sequence Length = 174995 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gccccgcgcccgccgcctcc 20 |||||||||||||||||||| Sbjct: 13842 gccccgcgcccgccgcctcc 13861
>emb|AL118509.9|HSJ770C23 Human DNA sequence from clone RP4-770C23 on chromosome 20 Contains part of the C20orf23 gene for a novel protein similar to KIF1 type and other kinesin-like proteins, complete sequence Length = 81487 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 cccttgggaaatgtttgttg 470 |||||||||||||||||||| Sbjct: 69682 cccttgggaaatgtttgttg 69663
>gb|BT000543.1| Arabidopsis thaliana putative auxin-induced protein (At3g17600/MKP6_15) mRNA, complete cds Length = 477 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatg 436 ||||||||||||||| |||||| || |||||| Sbjct: 368 tgacatatgaagacaaggatggagattggatg 399
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 422 gatggtgactggatgcttgttggagacgtccc 453 ||||||||||||||||| ||||| || ||||| Sbjct: 107047 gatggtgactggatgctcgttggtgatgtccc 107016
>emb|BX294148.1| Pirellula sp. strain 1 complete genome; segment 16/24 Length = 294850 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 aaaccaagaaggccgccgccgatg 167 ||||||||||||| |||||||||| Sbjct: 1632 aaaccaagaaggcggccgccgatg 1609
>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39 Length = 197976 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 422 gatggtgactggatgcttgttggagacgtccc 453 ||||||||||||||||| ||||| || ||||| Sbjct: 52543 gatggtgactggatgctcgttggtgatgtccc 52512
>gb|AY255132.1| Homo sapiens nasal embryonic LHRH factor variant 4 mRNA, complete cds, alternatively spliced Length = 3223 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctcc 20 |||||||||||||||||||| Sbjct: 194 gccccgcgcccgccgcctcc 175
>gb|AY255131.1| Homo sapiens nasal embryonic LHRH factor variant 3 mRNA, complete cds, alternatively spliced Length = 2897 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctcc 20 |||||||||||||||||||| Sbjct: 194 gccccgcgcccgccgcctcc 175
>gb|AY255130.1| Homo sapiens nasal embryonic LHRH factor variant 2 mRNA, complete cds, alternatively spliced Length = 2918 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctcc 20 |||||||||||||||||||| Sbjct: 194 gccccgcgcccgccgcctcc 175
>gb|AY255129.1| Homo sapiens nasal embryonic LHRH factor variant 1 mRNA, complete cds, alternatively spliced Length = 2981 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctcc 20 |||||||||||||||||||| Sbjct: 194 gccccgcgcccgccgcctcc 175
>gb|AY255128.1| Homo sapiens nasal embryonic LHRH factor mRNA, complete cds, alternatively spliced Length = 2987 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctcc 20 |||||||||||||||||||| Sbjct: 194 gccccgcgcccgccgcctcc 175
>gb|AC159242.2| Mus musculus BAC clone RP24-325A23 from chromosome 13, complete sequence Length = 193570 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gtgaacatggatggggaggt 252 |||||||||||||||||||| Sbjct: 72374 gtgaacatggatggggaggt 72393
>gb|AC025586.4| Genomic sequence for Mus musculus, clone RP23-320C8, complete sequence Length = 185386 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 180 agaaagacaaggaggagggcgagaagaa 207 ||||||| ||||||||||| |||||||| Sbjct: 27861 agaaagagaaggaggagggagagaagaa 27888
>gb|AE005737.1| Caulobacter crescentus CB15 section 63 of 359 of the complete genome Length = 11321 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 agaaggccgccgccgatgac 169 |||||||||||||||||||| Sbjct: 3046 agaaggccgccgccgatgac 3027
>dbj|AK074602.1| Homo sapiens cDNA FLJ90121 fis, clone HEMBA1007057 Length = 1852 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctcc 20 |||||||||||||||||||| Sbjct: 162 gccccgcgcccgccgcctcc 143
>gb|AC106038.3| Homo sapiens chromosome 8, clone RP11-68L18, complete sequence Length = 159024 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 tctgaataccagatgacatatgaa 415 |||||||||| ||||||||||||| Sbjct: 111525 tctgaatacccgatgacatatgaa 111548
>gb|AY054274.1| Arabidopsis thaliana AT3g17600/MKP6_15 mRNA, complete cds Length = 806 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatg 436 ||||||||||||||| |||||| || |||||| Sbjct: 446 tgacatatgaagacaaggatggagattggatg 477
>ref|NM_015537.3| Homo sapiens nasal embryonic LHRH factor (NELF), mRNA Length = 2972 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctcc 20 |||||||||||||||||||| Sbjct: 162 gccccgcgcccgccgcctcc 143
>gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome 14, complete sequence Length = 167114 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 gagacgagggtgatgaagag 595 |||||||||||||||||||| Sbjct: 52382 gagacgagggtgatgaagag 52363
>emb|BX825540.1|CNS0A6DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZA08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 579 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatg 436 ||||||||||||||| |||||| || |||||| Sbjct: 218 tgacatatgaagacaaggatggagattggatg 249
>emb|BX827786.1|CNS0A3TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH21ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1476 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtccc 453 ||||||||||||||||| ||||| || ||||| Sbjct: 639 gatggtgactggatgctcgttggtgatgtccc 670
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 aggctaaggatcatgaggac 501 |||||||||||||||||||| Sbjct: 1195135 aggctaaggatcatgaggac 1195116
>gb|AC167668.1| Mus musculus BAC clone RP24-241I19 from chromosome 14, complete sequence Length = 173679 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 gagacgagggtgatgaagag 595 |||||||||||||||||||| Sbjct: 5987 gagacgagggtgatgaagag 6006
>dbj|AB022219.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MKP6 Length = 83233 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 405 tgacatatgaagacagggatggtgactggatg 436 ||||||||||||||| |||||| || |||||| Sbjct: 41459 tgacatatgaagacaaggatggagattggatg 41428
>dbj|AB054127.1| Pseudobagrus tokiensis mitochondrial DNA, complete genome Length = 16529 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 529 gtttcaagccagtcacagaaccgc 552 ||||||||||||||||| |||||| Sbjct: 7057 gtttcaagccagtcacataaccgc 7080
>dbj|AK103483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130J12, full insert sequence Length = 1164 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 434 atgcttgttggagacgtcccttgggaaatgtt 465 |||||||||||||| || || ||||||||||| Sbjct: 664 atgcttgttggagatgtgccctgggaaatgtt 695
>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full insert sequence Length = 3151 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 433 gatgcttgttggagacgtcccttgggaa 460 ||||||||||||||||| ||| |||||| Sbjct: 2460 gatgcttgttggagacgacccatgggaa 2487
>dbj|AB026823.1| Cucumis sativus CsIAA3 mRNA for Aux/IAA protein, complete cds Length = 540 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtcccttgggaaatgtt 465 ||||||||||||||||| || || || || || ||||||||||| Sbjct: 445 gatggtgactggatgctcgtcggcgatgttccatgggaaatgtt 488
>gb|U18416.1|ATU18416 Arabidopsis thaliana IAA14 (IAA14) gene, partial cds Length = 732 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 422 gatggtgactggatgcttgttggagacgtccc 453 ||||||||||||||||| ||||| || ||||| Sbjct: 358 gatggtgactggatgctcgttggtgatgtccc 389
>gb|BC110498.1| Homo sapiens nasal embryonic LHRH factor, mRNA (cDNA clone MGC:125369 IMAGE:40007676), complete cds Length = 2324 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gccccgcgcccgccgcctcc 20 |||||||||||||||||||| Sbjct: 61 gccccgcgcccgccgcctcc 42
>emb|AL807747.10| Mouse DNA sequence from clone RP23-300N21 on chromosome 4, complete sequence Length = 228003 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 ccccgcgcccgccgcctccccggg 25 |||||| ||||||||||||||||| Sbjct: 20284 ccccgctcccgccgcctccccggg 20307
>gb|AY669802.1| Arabidopsis thaliana clone C00606 IAA31 (At3g17600) mRNA, complete cds Length = 477 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 405 tgacatatgaagacagggatggtgactggatg 436 ||||||||||||||| |||||| || |||||| Sbjct: 368 tgacatatgaagacaaggatggagattggatg 399
>gb|U24040.1|LMU24040 Liriope muscari 5.8S-26S rDNA internal transcribed spacer 2 (ITS2) Length = 223 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gcgcccgccgcctccccggg 25 |||||||||||||||||||| Sbjct: 51 gcgcccgccgcctccccggg 32
>emb|Z22382.1|HSDNASFAP H.sapiens DNA sequence Length = 351 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cgcccgccgcctccccgggg 26 |||||||||||||||||||| Sbjct: 34 cgcccgccgcctccccgggg 15
>emb|AL592422.11| Mouse DNA sequence from clone RP23-218O16 on chromosome 11, complete sequence Length = 205668 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 180 agaaagacaaggaggagggcgagaagaa 207 ||||||| ||||||||||| |||||||| Sbjct: 113220 agaaagagaaggaggagggagagaagaa 113247
>dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC clone 521F14, complete sequence Length = 116160 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 tctgaataccagatgacatatgaa 415 |||||||||| ||||||||||||| Sbjct: 86282 tctgaatacccgatgacatatgaa 86259
>dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response factor 2, partial cds Length = 2376 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 433 gatgcttgttggagacgtcccttgggaa 460 ||||||||||||||||| ||| |||||| Sbjct: 2202 gatgcttgttggagacgacccatgggaa 2229 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,846,229 Number of Sequences: 3902068 Number of extensions: 4846229 Number of successful extensions: 102597 Number of sequences better than 10.0: 224 Number of HSP's better than 10.0 without gapping: 226 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101763 Number of HSP's gapped (non-prelim): 818 length of query: 595 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 572 effective length of database: 17,143,297,704 effective search space: 9805966286688 effective search space used: 9805966286688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
