ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baala21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 315 1e-82
2dbj|AK071487.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
4dbj|AP004030.2| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
5gb|AF369888.1| Pisum sativum UOS1 mRNA, complete cds 62 2e-06
6ref|NM_117997.4| Arabidopsis thaliana unknown protein AT4G18810 ... 52 0.002
7emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, ... 52 0.002
8emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, B... 52 0.002
9gb|BT008364.1| Arabidopsis thaliana At4g18810 gene, complete cds 52 0.002
10gb|AY072319.1| Arabidopsis thaliana putative protein (At4g18810;... 52 0.002
11emb|BX827549.1|CNS0A4CE Arabidopsis thaliana Full-length cDNA Co... 52 0.002
12gb|AC093904.3| Homo sapiens BAC clone RP11-734K21 from 2, comple... 44 0.56
13ref|XM_421583.1| PREDICTED: Gallus gallus similar to procollagen... 42 2.2
14gb|AC026992.12| Homo sapiens chromosome 15, clone RP11-352D13, c... 42 2.2
15emb|CR406473.1| Gallus gallus finished cDNA, clone ChEST960o12 42 2.2
16gb|M26217.1|CHKP4HA Chicken prolyl 4-hydroxylase alpha subunit g... 42 2.2
17gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 40 8.8
18ref|XM_586236.2| PREDICTED: Bos taurus similar to DnaJ homology ... 40 8.8
19gb|AE006282.1| Lactococcus lactis subsp. lactis IL1403 section 4... 40 8.8
20gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's H... 40 8.8
21gb|AC124421.4| Mus musculus BAC clone RP24-323H7 from chromosome... 40 8.8
22gb|AC005532.2| Homo sapiens PAC clone RP4-733B9 from 7, complete... 40 8.8
23gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Ho... 40 8.8
24emb|AL121835.18|HSJ570O12 Human DNA sequence from clone RP4-570O... 40 8.8
25emb|Z99109.2|BSUB0006 Bacillus subtilis complete genome (section... 40 8.8
26emb|Y14084.1|BSY14084 Bacillus subtilis chromosomal DNA, region ... 40 8.8
27gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.8
28dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 8.8
29gb|AC101922.12| Mus musculus chromosome 3, clone RP24-182A8, com... 40 8.8
30dbj|AK015804.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 8.8
31gb|AC156616.5| Mus musculus chromosome 3, clone RP24-158L2, comp... 40 8.8
32gb|AC157364.6| Mus musculus chromosome 3, clone RP23-324P1, comp... 40 8.8
33gb|AC013356.8|AC013356 Homo sapiens chromosome 15 clone RP11-64K... 40 8.8
34gb|AF323670.1|AF323670 Bacteriophage bIL309, complete genome 40 8.8
35gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 8.8
36gb|AC102854.12| Mus musculus chromosome 3, clone RP24-493E20, co... 40 8.8
37gb|AC099584.8| Mus musculus chromosome 3, clone RP23-1A12, compl... 40 8.8
38emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chro... 40 8.8 
>dbj|AK068001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128H21, full
           insert sequence
          Length = 2281

 Score =  315 bits (159), Expect = 1e-82
 Identities = 369/439 (84%)
 Strand = Plus / Plus

                                                                       
Query: 200 agcagtcttgggatatcggcaggttcgccaagactctatttttcttcaacgggcctccga 259
           |||| ||||||||||||||||| || | || ||| || | ||||||||||||||| ||||
Sbjct: 305 agcaatcttgggatatcggcagatttgtcaggacgctgtatttcttcaacgggccaccga 364

                                                                       
Query: 260 atcctctcaagattgtggagtccataatgagcagcatcacagcctctgctcccactgagg 319
           |||||||||||||||| ||||||||  | |||||  |||||| |||||||||   |||||
Sbjct: 365 atcctctcaagattgtagagtccattcttagcagtttcacaggctctgctcctggtgagg 424

                                                                       
Query: 320 cgccgaagaaagcagagacttctgatgtggtgcttgtcactggagccaccggcggtgtcg 379
            ||| ||||||   ||  |||||||||||||||| ||||||||||| ||||| || || |
Sbjct: 425 tgccaaagaaaatggaatcttctgatgtggtgctggtcactggagctaccggtggcgttg 484

                                                                       
Query: 380 gacggagagtcgtcgatgtcctgcggaagaagggggtgcctgtccgagtattggttagaa 439
           |||| ||||| || ||| |||||||||| |||||  | || || |||||||||| |||||
Sbjct: 485 gacgaagagtggttgatatcctgcggaataagggaatacccgttcgagtattggctagaa 544

                                                                       
Query: 440 atgcagagaaggcgaggacaatgttggggccagatgtggacttgattataggcgatgtta 499
           ||| ||||||||||||||  ||| ||||||| ||||| |||||||| ||||| ||||| |
Sbjct: 545 atgaagagaaggcgaggagcatgctggggcccgatgtagacttgatcataggagatgtca 604

                                                                       
Query: 500 caaagggagacacactcgatcctaagtacttcaaagggatcaagaaagtaatcaatgcag 559
           |||||| | |  |||| ||||| ||||||||||||||||| ||||||||  | |||||||
Sbjct: 605 caaaggaaaattcacttgatcccaagtacttcaaagggattaagaaagtggtaaatgcag 664

                                                                       
Query: 560 tttcagtcatagtaggtccaaaggaaggtgatacaccggacaggcagaagtattcacaag 619
           | ||||| ||||| || ||||||||||| |||||||| |||||||||||||||  ||| |
Sbjct: 665 tgtcagttatagttgggccaaaggaaggcgatacaccagacaggcagaagtataaacagg 724

                              
Query: 620 gcatcaagttttttgaacc 638
           |||||||||||||||||||
Sbjct: 725 gcatcaagttttttgaacc 743
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>dbj|AK071487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099F01, full
           insert sequence
          Length = 2191

 Score =  248 bits (125), Expect = 2e-62
 Identities = 257/301 (85%)
 Strand = Plus / Plus

                                                                       
Query: 338 cttctgatgtggtgcttgtcactggagccaccggcggtgtcggacggagagtcgtcgatg 397
           |||||||||||||||| ||||||||||| ||||| || || ||||| ||||| || ||| 
Sbjct: 91  cttctgatgtggtgctggtcactggagctaccggtggcgttggacgaagagtggttgata 150

                                                                       
Query: 398 tcctgcggaagaagggggtgcctgtccgagtattggttagaaatgcagagaaggcgagga 457
           |||||||||| |||||  | || || |||||||||| |||||||| ||||||||||||||
Sbjct: 151 tcctgcggaataagggaatacccgttcgagtattggctagaaatgaagagaaggcgagga 210

                                                                       
Query: 458 caatgttggggccagatgtggacttgattataggcgatgttacaaagggagacacactcg 517
             ||| ||||||| ||||| |||||||| ||||| ||||| ||||||| | |  |||| |
Sbjct: 211 gcatgctggggcccgatgtagacttgatcataggagatgtcacaaaggaaaattcacttg 270

                                                                       
Query: 518 atcctaagtacttcaaagggatcaagaaagtaatcaatgcagtttcagtcatagtaggtc 577
           |||| ||||||||||||||||| ||||||||  | |||||||| ||||| ||||| || |
Sbjct: 271 atcccaagtacttcaaagggattaagaaagtggtaaatgcagtgtcagttatagttgggc 330

                                                                       
Query: 578 caaaggaaggtgatacaccggacaggcagaagtattcacaaggcatcaagttttttgaac 637
           |||||||||| |||||||| |||||||||||||||  ||| |||||||||||||||||||
Sbjct: 331 caaaggaaggcgatacaccagacaggcagaagtataaacagggcatcaagttttttgaac 390

            
Query: 638 c 638
           |
Sbjct: 391 c 391
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  107 bits (54), Expect = 4e-20
 Identities = 108/126 (85%)
 Strand = Plus / Plus

                                                                           
Query: 487     ataggcgatgttacaaagggagacacactcgatcctaagtacttcaaagggatcaagaaa 546
               ||||| ||||| ||||||| | |  |||| ||||| ||||||||||||||||| ||||||
Sbjct: 7622939 ataggagatgtcacaaaggaaaattcacttgatcccaagtacttcaaagggattaagaaa 7622998

                                                                           
Query: 547     gtaatcaatgcagtttcagtcatagtaggtccaaaggaaggtgatacaccggacaggcag 606
               ||  | |||||||| ||||| ||||| || ||||||||||| |||||||| |||||||||
Sbjct: 7622999 gtggtaaatgcagtgtcagttatagttgggccaaaggaaggcgatacaccagacaggcag 7623058

                     
Query: 607     aagtat 612
               ||||||
Sbjct: 7623059 aagtat 7623064



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                           
Query: 338     cttctgatgtggtgcttgtcactggagccaccggcggtgtcggacggagagtcgtcgatg 397
               |||||||||||||||| ||||||||||| ||||| || || ||||| ||||| || ||| 
Sbjct: 7622234 cttctgatgtggtgctggtcactggagctaccggtggcgttggacgaagagtggttgata 7622293

                                                    
Query: 398     tcctgcggaagaagggggtgcctgtccgagtattggt 434
               |||||||||| |||||  | || || |||||||||||
Sbjct: 7622294 tcctgcggaataagggaatacccgttcgagtattggt 7622330



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                           
Query: 200     agcagtcttgggatatcggcaggttcgccaagactctatttttcttcaacgggcctccga 259
               |||| ||||||||||||||||| || | || ||| || | ||||||||||||||| ||||
Sbjct: 7622001 agcaatcttgggatatcggcagatttgtcaggacgctgtatttcttcaacgggccaccga 7622060

                          
Query: 260     atcctctcaag 270
               |||||||||||
Sbjct: 7622061 atcctctcaag 7622071



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                
Query: 435     tagaaatgcagagaaggcgaggacaatgttggggccagatgtggacttg 483
               |||||||| ||||||||||||||  ||| ||||||| ||||| ||||||
Sbjct: 7622468 tagaaatgaagagaaggcgaggagcatgctggggcccgatgtagacttg 7622516



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 619     ggcatcaagttttttgaacc 638
               ||||||||||||||||||||
Sbjct: 7623161 ggcatcaagttttttgaacc 7623180
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>dbj|AP004030.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1145_E05
          Length = 101333

 Score =  107 bits (54), Expect = 4e-20
 Identities = 108/126 (85%)
 Strand = Plus / Plus

                                                                         
Query: 487   ataggcgatgttacaaagggagacacactcgatcctaagtacttcaaagggatcaagaaa 546
             ||||| ||||| ||||||| | |  |||| ||||| ||||||||||||||||| ||||||
Sbjct: 39699 ataggagatgtcacaaaggaaaattcacttgatcccaagtacttcaaagggattaagaaa 39758

                                                                         
Query: 547   gtaatcaatgcagtttcagtcatagtaggtccaaaggaaggtgatacaccggacaggcag 606
             ||  | |||||||| ||||| ||||| || ||||||||||| |||||||| |||||||||
Sbjct: 39759 gtggtaaatgcagtgtcagttatagttgggccaaaggaaggcgatacaccagacaggcag 39818

                   
Query: 607   aagtat 612
             ||||||
Sbjct: 39819 aagtat 39824



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                         
Query: 338   cttctgatgtggtgcttgtcactggagccaccggcggtgtcggacggagagtcgtcgatg 397
             |||||||||||||||| ||||||||||| ||||| || || ||||| ||||| || ||| 
Sbjct: 38994 cttctgatgtggtgctggtcactggagctaccggtggcgttggacgaagagtggttgata 39053

                                                  
Query: 398   tcctgcggaagaagggggtgcctgtccgagtattggt 434
             |||||||||| |||||  | || || |||||||||||
Sbjct: 39054 tcctgcggaataagggaatacccgttcgagtattggt 39090



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 200   agcagtcttgggatatcggcaggttcgccaagactctatttttcttcaacgggcctccga 259
             |||| ||||||||||||||||| || | || ||| || | ||||||||||||||| ||||
Sbjct: 38761 agcaatcttgggatatcggcagatttgtcaggacgctgtatttcttcaacgggccaccga 38820

                        
Query: 260   atcctctcaag 270
             |||||||||||
Sbjct: 38821 atcctctcaag 38831



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 435   tagaaatgcagagaaggcgaggacaatgttggggccagatgtggacttg 483
             |||||||| ||||||||||||||  ||| ||||||| ||||| ||||||
Sbjct: 39228 tagaaatgaagagaaggcgaggagcatgctggggcccgatgtagacttg 39276



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 619   ggcatcaagttttttgaacc 638
             ||||||||||||||||||||
Sbjct: 39921 ggcatcaagttttttgaacc 39940
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>gb|AF369888.1| Pisum sativum UOS1 mRNA, complete cds
          Length = 2173

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                       
Query: 359 ctggagccaccggcggtgtcggacggagagtcgtcgatgtcctgcggaagaagggggtgc 418
           ||||||| ||||| ||||| || || ||||| || |||||  | |||||||| ||  | |
Sbjct: 466 ctggagctaccggtggtgttggtcgaagagtggttgatgtgttacggaagaaaggaattc 525

                                          
Query: 419 ctgtccgagtattggttagaaatgcagagaa 449
           |||||||||||||||||||||||| ||||||
Sbjct: 526 ctgtccgagtattggttagaaatgaagagaa 556
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>ref|NM_117997.4| Arabidopsis thaliana unknown protein AT4G18810 mRNA, complete cds
          Length = 2010

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 543 gaaagtaatcaatgcagtttcagtcatagtaggtccaaaggaaggtgatacacc 596
           |||||| |||||||| ||||| || || || |||||||||||||| ||||||||
Sbjct: 602 gaaagtgatcaatgctgtttctgttattgttggtccaaaggaaggagatacacc 655



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 429 attggttagaaatgcagagaaggc 452
           |||||||||||||| |||||||||
Sbjct: 488 attggttagaaatgaagagaaggc 511
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>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
          Length = 199075

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                    
Query: 543    gaaagtaatcaatgcagtttcagtcatagtaggtccaaaggaaggtgatacacc 596
              |||||| |||||||| ||||| || || || |||||||||||||| ||||||||
Sbjct: 102930 gaaagtgatcaatgctgtttctgttattgttggtccaaaggaaggagatacacc 102877
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>emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A21 (ESSA project)
          Length = 94301

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                   
Query: 543   gaaagtaatcaatgcagtttcagtcatagtaggtccaaaggaaggtgatacacc 596
             |||||| |||||||| ||||| || || || |||||||||||||| ||||||||
Sbjct: 83649 gaaagtgatcaatgctgtttctgttattgttggtccaaaggaaggagatacacc 83596
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>gb|BT008364.1| Arabidopsis thaliana At4g18810 gene, complete cds
          Length = 1791

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 543 gaaagtaatcaatgcagtttcagtcatagtaggtccaaaggaaggtgatacacc 596
           |||||| |||||||| ||||| || || || |||||||||||||| ||||||||
Sbjct: 567 gaaagtgatcaatgctgtttctgttattgttggtccaaaggaaggagatacacc 620



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 429 attggttagaaatgcagagaaggc 452
           |||||||||||||| |||||||||
Sbjct: 453 attggttagaaatgaagagaaggc 476
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>gb|AY072319.1| Arabidopsis thaliana putative protein (At4g18810; F28A21.220) mRNA,
           complete cds
          Length = 2007

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 543 gaaagtaatcaatgcagtttcagtcatagtaggtccaaaggaaggtgatacacc 596
           |||||| |||||||| ||||| || || || |||||||||||||| ||||||||
Sbjct: 602 gaaagtgatcaatgctgtttctgttattgttggtccaaaggaaggagatacacc 655



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 429 attggttagaaatgcagagaaggc 452
           |||||||||||||| |||||||||
Sbjct: 488 attggttagaaatgaagagaaggc 511
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>emb|BX827549.1|CNS0A4CE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS72ZB07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1925

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 543 gaaagtaatcaatgcagtttcagtcatagtaggtccaaaggaaggtgatacacc 596
           |||||| |||||||| ||||| || || || |||||||||||||| ||||||||
Sbjct: 581 gaaagtgatcaatgctgtttctgttattgttggtccaaaggaaggagatacacc 634
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>gb|AC093904.3| Homo sapiens BAC clone RP11-734K21 from 2, complete sequence
          Length = 191827

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 298    acagcctctgctcccactgagg 319
              ||||||||||||||||||||||
Sbjct: 152355 acagcctctgctcccactgagg 152376
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>ref|XM_421583.1| PREDICTED: Gallus gallus similar to procollagen-proline dioxygenase
            (EC 1.14.11.2) alpha chain - chicken (LOC423704), mRNA
          Length = 3304

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 287  tgagcagcatcacagcctctgctcc 311
            ||||||||| |||||||||||||||
Sbjct: 2819 tgagcagcaccacagcctctgctcc 2795
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>gb|AC026992.12| Homo sapiens chromosome 15, clone RP11-352D13, complete sequence
          Length = 177902

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 326    agaaagcagagacttctgatg 346
              |||||||||||||||||||||
Sbjct: 156316 agaaagcagagacttctgatg 156296
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>emb|CR406473.1| Gallus gallus finished cDNA, clone ChEST960o12
          Length = 875

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 287 tgagcagcatcacagcctctgctcc 311
           ||||||||| |||||||||||||||
Sbjct: 365 tgagcagcaccacagcctctgctcc 341
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>gb|M26217.1|CHKP4HA Chicken prolyl 4-hydroxylase alpha subunit gene, 3' end
          Length = 3149

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 287  tgagcagcatcacagcctctgctcc 311
            ||||||||| |||||||||||||||
Sbjct: 2656 tgagcagcaccacagcctctgctcc 2632
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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    aagactctatttttcttcaa 248
              ||||||||||||||||||||
Sbjct: 878794 aagactctatttttcttcaa 878813
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>ref|XM_586236.2| PREDICTED: Bos taurus similar to DnaJ homology subfamily A member 5
           isoform 2 (LOC509302), mRNA
          Length = 1876

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 438 aaatgcagagaaggcgagga 457
           ||||||||||||||||||||
Sbjct: 639 aaatgcagagaaggcgagga 658
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>gb|AE006282.1| Lactococcus lactis subsp. lactis IL1403 section 44 of 218 of the
             complete genome
          Length = 12280

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   tcaatgcagtttcagtcata 570
             ||||||||||||||||||||
Sbjct: 11577 tcaatgcagtttcagtcata 11558
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>gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 256354

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   cacagcctctgctcccactg 316
             ||||||||||||||||||||
Sbjct: 63266 cacagcctctgctcccactg 63247
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>gb|AC124421.4| Mus musculus BAC clone RP24-323H7 from chromosome 10, complete sequence
          Length = 187081

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 434    ttagaaatgcagagaaggcg 453
              ||||||||||||||||||||
Sbjct: 106068 ttagaaatgcagagaaggcg 106049
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>gb|AC005532.2| Homo sapiens PAC clone RP4-733B9 from 7, complete sequence
          Length = 115954

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    gaatcctctcaagattgtgg 277
              ||||||||||||||||||||
Sbjct: 106196 gaatcctctcaagattgtgg 106177
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>gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 237247

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   cacagcctctgctcccactg 316
             ||||||||||||||||||||
Sbjct: 50500 cacagcctctgctcccactg 50519
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>emb|AL121835.18|HSJ570O12 Human DNA sequence from clone RP4-570O12 on chromosome 6q15-16.2
             Contains the 5' end of the CNR1 gene for cannabinoid
             receptor 1 (brain), a ribsomal protein S14 (RPS14)
             pseudogene and a CpG island, complete sequence
          Length = 116691

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   aatgttggggccagatgtgg 478
             ||||||||||||||||||||
Sbjct: 65165 aatgttggggccagatgtgg 65146
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>emb|Z99109.2|BSUB0006 Bacillus subtilis complete genome (section 6 of 21): from 1011039 to
             1209781
          Length = 198743

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 349   gtgcttgtcactggagccaccggcggtgtcgg 380
             ||||| ||||| ||||| ||||||||||||||
Sbjct: 95249 gtgctagtcacaggagcaaccggcggtgtcgg 95280
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>emb|Y14084.1|BSY14084 Bacillus subtilis chromosomal DNA, region 78-80 degrees: aprE to comK
          Length = 12556

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 349  gtgcttgtcactggagccaccggcggtgtcgg 380
            ||||| ||||| ||||| ||||||||||||||
Sbjct: 1383 gtgctagtcacaggagcaaccggcggtgtcgg 1414
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>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
               sequence
          Length = 1632307

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 323     cgaagaaagcagagacttctgatg 346
               ||||||||||| ||||||||||||
Sbjct: 1360159 cgaagaaagcatagacttctgatg 1360136
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   ggagtccataatgagcagca 295
             ||||||||||||||||||||
Sbjct: 67044 ggagtccataatgagcagca 67063
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>gb|AC101922.12| Mus musculus chromosome 3, clone RP24-182A8, complete sequence
          Length = 173400

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    ccaagactctatttttcttc 246
              ||||||||||||||||||||
Sbjct: 115338 ccaagactctatttttcttc 115357
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>dbj|AK015804.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930516E23 product:unclassifiable, full
           insert sequence
          Length = 978

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 434 ttagaaatgcagagaaggcg 453
           ||||||||||||||||||||
Sbjct: 279 ttagaaatgcagagaaggcg 298
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>gb|AC156616.5| Mus musculus chromosome 3, clone RP24-158L2, complete sequence
          Length = 127112

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 493   gatgttacaaagggagacac 512
             ||||||||||||||||||||
Sbjct: 27498 gatgttacaaagggagacac 27517
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>gb|AC157364.6| Mus musculus chromosome 3, clone RP23-324P1, complete sequence
          Length = 198706

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 493   gatgttacaaagggagacac 512
             ||||||||||||||||||||
Sbjct: 23123 gatgttacaaagggagacac 23104
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>gb|AC013356.8|AC013356 Homo sapiens chromosome 15 clone RP11-64K12 map 15q14, complete
             sequence
          Length = 176910

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 522   taagtacttcaaagggatcaagaa 545
             |||||| |||||||||||||||||
Sbjct: 27032 taagtaattcaaagggatcaagaa 27055
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>gb|AF323670.1|AF323670 Bacteriophage bIL309, complete genome
          Length = 36949

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   tcaatgcagtttcagtcata 570
             ||||||||||||||||||||
Sbjct: 24240 tcaatgcagtttcagtcata 24221
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 389     tcgtcgatgtcctgcggaag 408
               ||||||||||||||||||||
Sbjct: 1310715 tcgtcgatgtcctgcggaag 1310696
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>gb|AC102854.12| Mus musculus chromosome 3, clone RP24-493E20, complete sequence
          Length = 133271

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 493   gatgttacaaagggagacac 512
             ||||||||||||||||||||
Sbjct: 92821 gatgttacaaagggagacac 92840
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>gb|AC099584.8| Mus musculus chromosome 3, clone RP23-1A12, complete sequence
          Length = 217366

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    ccaagactctatttttcttc 246
              ||||||||||||||||||||
Sbjct: 200020 ccaagactctatttttcttc 200001
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>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete
              sequence
          Length = 191255

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 395    atgtcctgcggaagaagggg 414
              ||||||||||||||||||||
Sbjct: 173208 atgtcctgcggaagaagggg 173189


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,608,711
Number of Sequences: 3902068
Number of extensions: 4608711
Number of successful extensions: 86958
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86798
Number of HSP's gapped (non-prelim): 159
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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