ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalb10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 137 bits (69), Expect = 4e-29 Identities = 129/149 (86%) Strand = Plus / Minus Query: 55 aagctcgggaaaggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccg 114 ||||||||||||||||||||||| ||||| ||||||||||||||||| || | || ||| Sbjct: 4971331 aagctcgggaaaggcgactggcgcggcatttcccggcacttcgtcacgacaagaacaccg 4971272 Query: 115 acgcaggtggccagccacgcccaaaagtacttcctccggcaggccggcctcgcgcagaag 174 ||||||||||||||||| ||||| ||||| |||||| ||||| | ||||| |||||||| Sbjct: 4971271 acgcaggtggccagccatgcccagaagtatttcctcaggcagagcagcctcacgcagaag 4971212 Query: 175 aagcggcgctccagcctcttcgacgtggt 203 ||| | | ||||||||||| |||||||| Sbjct: 4971211 aagagaagatccagcctctttgacgtggt 4971183 Score = 105 bits (53), Expect = 2e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 67 ggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggcc 126 |||||||||||||||||||||||| || |||||| ||| | || ||||| ||||| ||| Sbjct: 23757592 ggcgactggcgaggcatctcccggagctacgtcacgacgaggaccccgacccaggtcgcc 23757651 Query: 127 agccacgcccaaaagtacttcctccggcaggccggcctcgcgcagaagaagcggcgctcc 186 ||||||||||| |||| ||||||| ||||| | || ||| |||||||||| |||||| Sbjct: 23757652 agccacgcccagaagttcttcctcaggcagagcagcatcggcaagaagaagcgccgctcc 23757711 Query: 187 agcctcttcgacgtggt 203 |||||||||||| |||| Sbjct: 23757712 agcctcttcgacatggt 23757728 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 103 acgcgcacgccgacgcaggtggccagccacgcccaaaagtacttcctccggcaggcc 159 ||||| ||||||||||||||||| |||||||| || ||||||||| ||||||||||| Sbjct: 37352311 acgcggacgccgacgcaggtggcgagccacgcgcagaagtacttcatccggcaggcc 37352367 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 109 acgccgacgcaggtggccagccacgcccaaaagtacttcctccg 152 |||||||||||||||||||||||||| || ||||||||| |||| Sbjct: 36757847 acgccgacgcaggtggccagccacgcgcagaagtacttcatccg 36757804 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 70 gactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagc 129 |||||||| ||||||| || ||||||||| | |||| ||||| ||||||||||| ||| Sbjct: 18752119 gactggcggagcatctcgcgcaacttcgtcatctcgcggacgccaacgcaggtggcgagc 18752178 Query: 130 cacgcccaaaagtacttcctccg 152 ||||| || ||||||||| |||| Sbjct: 18752179 cacgcgcagaagtacttcatccg 18752201
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 137 bits (69), Expect = 4e-29 Identities = 129/149 (86%) Strand = Plus / Minus Query: 55 aagctcgggaaaggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccg 114 ||||||||||||||||||||||| ||||| ||||||||||||||||| || | || ||| Sbjct: 71784 aagctcgggaaaggcgactggcgcggcatttcccggcacttcgtcacgacaagaacaccg 71725 Query: 115 acgcaggtggccagccacgcccaaaagtacttcctccggcaggccggcctcgcgcagaag 174 ||||||||||||||||| ||||| ||||| |||||| ||||| | ||||| |||||||| Sbjct: 71724 acgcaggtggccagccatgcccagaagtatttcctcaggcagagcagcctcacgcagaag 71665 Query: 175 aagcggcgctccagcctcttcgacgtggt 203 ||| | | ||||||||||| |||||||| Sbjct: 71664 aagagaagatccagcctctttgacgtggt 71636
>dbj|AK102403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092K06, full insert sequence Length = 1907 Score = 137 bits (69), Expect = 4e-29 Identities = 129/149 (86%) Strand = Plus / Plus Query: 55 aagctcgggaaaggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccg 114 ||||||||||||||||||||||| ||||| ||||||||||||||||| || | || ||| Sbjct: 1042 aagctcgggaaaggcgactggcgcggcatttcccggcacttcgtcacgacaagaacaccg 1101 Query: 115 acgcaggtggccagccacgcccaaaagtacttcctccggcaggccggcctcgcgcagaag 174 ||||||||||||||||| ||||| ||||| |||||| ||||| | ||||| |||||||| Sbjct: 1102 acgcaggtggccagccatgcccagaagtatttcctcaggcagagcagcctcacgcagaag 1161 Query: 175 aagcggcgctccagcctcttcgacgtggt 203 ||| | | ||||||||||| |||||||| Sbjct: 1162 aagagaagatccagcctctttgacgtggt 1190
>ref|NM_189680.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 732 Score = 133 bits (67), Expect = 7e-28 Identities = 127/147 (86%) Strand = Plus / Plus Query: 55 aagctcgggaaaggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccg 114 ||||||||||||||||||||||| ||||| ||||||||||||||||| || | || ||| Sbjct: 418 aagctcgggaaaggcgactggcgcggcatttcccggcacttcgtcacgacaagaacaccg 477 Query: 115 acgcaggtggccagccacgcccaaaagtacttcctccggcaggccggcctcgcgcagaag 174 ||||||||||||||||| ||||| ||||| |||||| ||||| | ||||| |||||||| Sbjct: 478 acgcaggtggccagccatgcccagaagtatttcctcaggcagagcagcctcacgcagaag 537 Query: 175 aagcggcgctccagcctcttcgacgtg 201 ||| | | ||||||||||| |||||| Sbjct: 538 aagagaagatccagcctctttgacgtg 564
>dbj|AK062109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B07, full insert sequence Length = 1476 Score = 133 bits (67), Expect = 7e-28 Identities = 127/147 (86%) Strand = Plus / Plus Query: 55 aagctcgggaaaggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccg 114 ||||||||||||||||||||||| ||||| ||||||||||||||||| || | || ||| Sbjct: 742 aagctcgggaaaggcgactggcgcggcatttcccggcacttcgtcacgacaagaacaccg 801 Query: 115 acgcaggtggccagccacgcccaaaagtacttcctccggcaggccggcctcgcgcagaag 174 ||||||||||||||||| ||||| ||||| |||||| ||||| | ||||| |||||||| Sbjct: 802 acgcaggtggccagccatgcccagaagtatttcctcaggcagagcagcctcacgcagaag 861 Query: 175 aagcggcgctccagcctcttcgacgtg 201 ||| | | ||||||||||| |||||| Sbjct: 862 aagagaagatccagcctctttgacgtg 888
>ref|NM_192660.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 906 Score = 105 bits (53), Expect = 2e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 67 ggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggcc 126 |||||||||||||||||||||||| || |||||| ||| | || ||||| ||||| ||| Sbjct: 457 ggcgactggcgaggcatctcccggagctacgtcacgacgaggaccccgacccaggtcgcc 516 Query: 127 agccacgcccaaaagtacttcctccggcaggccggcctcgcgcagaagaagcggcgctcc 186 ||||||||||| |||| ||||||| ||||| | || ||| |||||||||| |||||| Sbjct: 517 agccacgcccagaagttcttcctcaggcagagcagcatcggcaagaagaagcgccgctcc 576 Query: 187 agcctcttcgacgtggt 203 |||||||||||| |||| Sbjct: 577 agcctcttcgacatggt 593
>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F01 Length = 163671 Score = 105 bits (53), Expect = 2e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 67 ggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggcc 126 |||||||||||||||||||||||| || |||||| ||| | || ||||| ||||| ||| Sbjct: 135296 ggcgactggcgaggcatctcccggagctacgtcacgacgaggaccccgacccaggtcgcc 135355 Query: 127 agccacgcccaaaagtacttcctccggcaggccggcctcgcgcagaagaagcggcgctcc 186 ||||||||||| |||| ||||||| ||||| | || ||| |||||||||| |||||| Sbjct: 135356 agccacgcccagaagttcttcctcaggcagagcagcatcggcaagaagaagcgccgctcc 135415 Query: 187 agcctcttcgacgtggt 203 |||||||||||| |||| Sbjct: 135416 agcctcttcgacatggt 135432
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 105 bits (53), Expect = 2e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 67 ggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggcc 126 |||||||||||||||||||||||| || |||||| ||| | || ||||| ||||| ||| Sbjct: 38177 ggcgactggcgaggcatctcccggagctacgtcacgacgaggaccccgacccaggtcgcc 38236 Query: 127 agccacgcccaaaagtacttcctccggcaggccggcctcgcgcagaagaagcggcgctcc 186 ||||||||||| |||| ||||||| ||||| | || ||| |||||||||| |||||| Sbjct: 38237 agccacgcccagaagttcttcctcaggcagagcagcatcggcaagaagaagcgccgctcc 38296 Query: 187 agcctcttcgacgtggt 203 |||||||||||| |||| Sbjct: 38297 agcctcttcgacatggt 38313
>dbj|AK103432.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128P13, full insert sequence Length = 1490 Score = 105 bits (53), Expect = 2e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 67 ggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggcc 126 |||||||||||||||||||||||| || |||||| ||| | || ||||| ||||| ||| Sbjct: 682 ggcgactggcgaggcatctcccggagctacgtcacgacgaggaccccgacccaggtcgcc 741 Query: 127 agccacgcccaaaagtacttcctccggcaggccggcctcgcgcagaagaagcggcgctcc 186 ||||||||||| |||| ||||||| ||||| | || ||| |||||||||| |||||| Sbjct: 742 agccacgcccagaagttcttcctcaggcagagcagcatcggcaagaagaagcgccgctcc 801 Query: 187 agcctcttcgacgtggt 203 |||||||||||| |||| Sbjct: 802 agcctcttcgacatggt 818
>dbj|AK061500.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D10, full insert sequence Length = 1162 Score = 105 bits (53), Expect = 2e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 67 ggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggcc 126 |||||||||||||||||||||||| || |||||| ||| | || ||||| ||||| ||| Sbjct: 448 ggcgactggcgaggcatctcccggagctacgtcacgacgaggaccccgacccaggtcgcc 507 Query: 127 agccacgcccaaaagtacttcctccggcaggccggcctcgcgcagaagaagcggcgctcc 186 ||||||||||| |||| ||||||| ||||| | || ||| |||||||||| |||||| Sbjct: 508 agccacgcccagaagttcttcctcaggcagagcagcatcggcaagaagaagcgccgctcc 567 Query: 187 agcctcttcgacgtggt 203 |||||||||||| |||| Sbjct: 568 agcctcttcgacatggt 584
>emb|AJ303354.1|HVU303354 Hordeum vulgare cv. Haisa mRNA for MCB1 protein Length = 1115 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 70 gactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagc 129 |||||| ||||||||||| | ||||||||||||| | ||| | ||||||||||||||| Sbjct: 378 gactggagaggcatctccaagaacttcgtcaccaccaggacggccacgcaggtggccagc 437 Query: 130 cacgcccaaaagtacttcctccggcaggccggcctcgcgcagaagaagcggcgctccagc 189 |||||||| |||||||||||||||||| || || || |||||||||| || ||||| Sbjct: 438 cacgcccagaagtacttcctccggcagaccaaccccggcaagaagaagcgccgggccagc 497 Query: 190 ctcttcgacgt 200 ||||||||||| Sbjct: 498 ctcttcgacgt 508
>emb|AJ965495.1| Hordeum vulgare mcb1 gene, exons 1-5 Length = 1515 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 70 gactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagc 129 |||||| ||||||||||| | ||||||||||||| | ||| | ||||||||||||||| Sbjct: 733 gactggagaggcatctccaagaacttcgtcaccaccaggacggccacgcaggtggccagc 792 Query: 130 cacgcccaaaagtacttcctccggcaggccggcctcgcgcagaagaagcggcgctccagc 189 |||||||| |||||||||||||||||| || || || |||||||||| || ||||| Sbjct: 793 cacgcccagaagtacttcctccggcagaccaaccccggcaagaagaagcgccgggccagc 852 Query: 190 ctcttcgacgt 200 ||||||||||| Sbjct: 853 ctcttcgacgt 863
>ref|XM_476082.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 864 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 35 gttcctggccggcctggnanaagctcgggaaaggcgactggcgaggcatctcccggcact 94 |||||| |||||||| | | |||||||| |||||||||||||| ||||| || ||||||| Sbjct: 396 gttcctcgccggccttg-acaagctcggaaaaggcgactggcggggcatttctcggcact 454 Query: 95 tcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagtacttcct 149 ||||||| || || || || |||||||| |||||||| ||||| ||||||||||| Sbjct: 455 tcgtcactacccggactccaacgcaggtcgccagccatgcccagaagtacttcct 509
>gb|AC132486.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0473H02, complete sequence Length = 141027 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 35 gttcctggccggcctggnanaagctcgggaaaggcgactggcgaggcatctcccggcact 94 |||||| |||||||| | | |||||||| |||||||||||||| ||||| || ||||||| Sbjct: 111792 gttcctcgccggccttg-acaagctcggaaaaggcgactggcggggcatttctcggcact 111734 Query: 95 tcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagtacttcct 149 ||||||| || || || || |||||||| |||||||| ||||| ||||||||||| Sbjct: 111733 tcgtcactacccggactccaacgcaggtcgccagccatgcccagaagtacttcct 111679
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 35 gttcctggccggcctggnanaagctcgggaaaggcgactggcgaggcatctcccggcact 94 |||||| |||||||| | | |||||||| |||||||||||||| ||||| || ||||||| Sbjct: 5789418 gttcctcgccggccttg-acaagctcggaaaaggcgactggcggggcatttctcggcact 5789360 Query: 95 tcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagtacttcct 149 ||||||| || || || || |||||||| |||||||| ||||| ||||||||||| Sbjct: 5789359 tcgtcactacccggactccaacgcaggtcgccagccatgcccagaagtacttcct 5789305 Score = 87.7 bits (44), Expect = 4e-14 Identities = 108/129 (83%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 24 gagcaccggnngttcctggccggcctggnanaagctcgggaaaggcgactggcgaggcat 83 |||||| || ||||||||| || |||| | ||||| || || ||||||||||||||||| Sbjct: 29127704 gagcacaggctgttcctggcggggctgg-agaagctgggcaagggcgactggcgaggcat 29127646 Query: 84 ctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagta 143 ||||||| |||||||||||| | ||||| || ||||| |||||||| ||||| |||| Sbjct: 29127645 ctcccggagcttcgtcaccaccaggacgcccacccaggtcgccagccatgcccagaagtt 29127586 Query: 144 cttcctccg 152 ||||||||| Sbjct: 29127585 cttcctccg 29127577 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 109 acgccgacgcaggtggccagccacgcccaaaagtacttcctccggc 154 |||||||||||||||||||||||||| || ||||||||| |||||| Sbjct: 21937270 acgccgacgcaggtggccagccacgcgcagaagtacttcatccggc 21937225 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 103 acgcgcacgccgacgcaggtggccagccacgcccaaaagtacttc 147 ||||| || |||||||||||||| |||||||| ||||||| |||| Sbjct: 21505080 acgcggaccccgacgcaggtggcgagccacgcacaaaagttcttc 21505036 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 aagcggcgctccagcctcttcgacgtggt 203 ||||| |||||||||||||||||| |||| Sbjct: 29127545 aagcgccgctccagcctcttcgacatggt 29127517
>dbj|AK065594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029P13, full insert sequence Length = 3358 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 35 gttcctggccggcctggnanaagctcgggaaaggcgactggcgaggcatctcccggcact 94 |||||| |||||||| | | |||||||| |||||||||||||| ||||| || ||||||| Sbjct: 2309 gttcctcgccggccttg-acaagctcggaaaaggcgactggcggggcatttctcggcact 2367 Query: 95 tcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagtacttcct 149 ||||||| || || || || |||||||| |||||||| ||||| ||||||||||| Sbjct: 2368 tcgtcactacccggactccaacgcaggtcgccagccatgcccagaagtacttcct 2422
>dbj|AK061427.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H01, full insert sequence Length = 1149 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 35 gttcctggccggcctggnanaagctcgggaaaggcgactggcgaggcatctcccggcact 94 |||||| |||||||| | | |||||||| |||||||||||||| ||||| || ||||||| Sbjct: 511 gttcctcgccggccttg-acaagctcggaaaaggcgactggcggggcatttctcggcact 569 Query: 95 tcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagtacttcct 149 ||||||| || || || || |||||||| |||||||| ||||| ||||||||||| Sbjct: 570 tcgtcactacccggactccaacgcaggtcgccagccatgcccagaagtacttcct 624
>ref|XM_475998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 87.7 bits (44), Expect = 4e-14 Identities = 108/129 (83%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 24 gagcaccggnngttcctggccggcctggnanaagctcgggaaaggcgactggcgaggcat 83 |||||| || ||||||||| || |||| | ||||| || || ||||||||||||||||| Sbjct: 361 gagcacaggctgttcctggcggggctgg-agaagctgggcaagggcgactggcgaggcat 419 Query: 84 ctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagta 143 ||||||| |||||||||||| | ||||| || ||||| |||||||| ||||| |||| Sbjct: 420 ctcccggagcttcgtcaccaccaggacgcccacccaggtcgccagccatgcccagaagtt 479 Query: 144 cttcctccg 152 ||||||||| Sbjct: 480 cttcctccg 488 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 175 aagcggcgctccagcctcttcgacgtggt 203 ||||| |||||||||||||||||| |||| Sbjct: 520 aagcgccgctccagcctcttcgacatggt 548
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 87.7 bits (44), Expect = 4e-14 Identities = 108/129 (83%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 24 gagcaccggnngttcctggccggcctggnanaagctcgggaaaggcgactggcgaggcat 83 |||||| || ||||||||| || |||| | ||||| || || ||||||||||||||||| Sbjct: 11163 gagcacaggctgttcctggcggggctgg-agaagctgggcaagggcgactggcgaggcat 11105 Query: 84 ctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagta 143 ||||||| |||||||||||| | ||||| || ||||| |||||||| ||||| |||| Sbjct: 11104 ctcccggagcttcgtcaccaccaggacgcccacccaggtcgccagccatgcccagaagtt 11045 Query: 144 cttcctccg 152 ||||||||| Sbjct: 11044 cttcctccg 11036 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 aagcggcgctccagcctcttcgacgtggt 203 ||||| |||||||||||||||||| |||| Sbjct: 11004 aagcgccgctccagcctcttcgacatggt 10976
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 87.7 bits (44), Expect = 4e-14 Identities = 108/129 (83%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 24 gagcaccggnngttcctggccggcctggnanaagctcgggaaaggcgactggcgaggcat 83 |||||| || ||||||||| || |||| | ||||| || || ||||||||||||||||| Sbjct: 53928 gagcacaggctgttcctggcggggctgg-agaagctgggcaagggcgactggcgaggcat 53870 Query: 84 ctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagta 143 ||||||| |||||||||||| | ||||| || ||||| |||||||| ||||| |||| Sbjct: 53869 ctcccggagcttcgtcaccaccaggacgcccacccaggtcgccagccatgcccagaagtt 53810 Query: 144 cttcctccg 152 ||||||||| Sbjct: 53809 cttcctccg 53801 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 aagcggcgctccagcctcttcgacgtggt 203 ||||| |||||||||||||||||| |||| Sbjct: 53769 aagcgccgctccagcctcttcgacatggt 53741
>dbj|AK068595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154K05, full insert sequence Length = 1104 Score = 87.7 bits (44), Expect = 4e-14 Identities = 108/129 (83%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 24 gagcaccggnngttcctggccggcctggnanaagctcgggaaaggcgactggcgaggcat 83 |||||| || ||||||||| || |||| | ||||| || || ||||||||||||||||| Sbjct: 403 gagcacaggctgttcctggcggggctgg-agaagctgggcaagggcgactggcgaggcat 461 Query: 84 ctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagta 143 ||||||| |||||||||||| | ||||| || ||||| |||||||| ||||| |||| Sbjct: 462 ctcccggagcttcgtcaccaccaggacgcccacccaggtcgccagccatgcccagaagtt 521 Query: 144 cttcctccg 152 ||||||||| Sbjct: 522 cttcctccg 530 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 175 aagcggcgctccagcctcttcgacgtggt 203 ||||| |||||||||||||||||| |||| Sbjct: 562 aagcgccgctccagcctcttcgacatggt 590
>dbj|AK059813.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B05, full insert sequence Length = 1128 Score = 87.7 bits (44), Expect = 4e-14 Identities = 108/129 (83%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 24 gagcaccggnngttcctggccggcctggnanaagctcgggaaaggcgactggcgaggcat 83 |||||| || ||||||||| || |||| | ||||| || || ||||||||||||||||| Sbjct: 464 gagcacaggctgttcctggcggggctgg-agaagctgggcaagggcgactggcgaggcat 522 Query: 84 ctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagta 143 ||||||| |||||||||||| | ||||| || ||||| |||||||| ||||| |||| Sbjct: 523 ctcccggagcttcgtcaccaccaggacgcccacccaggtcgccagccatgcccagaagtt 582 Query: 144 cttcctccg 152 ||||||||| Sbjct: 583 cttcctccg 591 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 175 aagcggcgctccagcctcttcgacgtggt 203 ||||| |||||||||||||||||| |||| Sbjct: 623 aagcgccgctccagcctcttcgacatggt 651
>gb|AY106692.1| Zea mays PCO074228 mRNA sequence Length = 1178 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 93 cttcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagtacttcctccg 152 |||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 463 cttcgtcaccaccaggacggcgacgcaggtggccagccacgcccagaagtacttcctccg 522 Query: 153 gcag 156 |||| Sbjct: 523 gcag 526
>dbj|AK105542.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-H11, full insert sequence Length = 1340 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/118 (84%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 35 gttcctggccggcctggnanaagctcgggaaaggcgactggcgaggcatctcccggcact 94 ||||||||| || |||| | ||||| || || |||||||||||||||||||||||| || Sbjct: 741 gttcctggcggggctgg-agaagctgggcaagggcgactggcgaggcatctcccggagct 683 Query: 95 tcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagtacttcctccg 152 |||||||||| | ||||| || ||||| |||||||| ||||| |||| ||||||||| Sbjct: 682 tcgtcaccaccaggacgcccacccaggtcgccagccatgcccagaagttcttcctccg 625 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 aagcggcgctccagcctcttcgacgtggt 203 ||||| |||||||||||||||||| |||| Sbjct: 593 aagcgccgctccagcctcttcgacatggt 565
>ref|NM_197754.1| Oryza sativa (japonica cultivar-group) putative Myb-related protein (OSJNBb0089A17.5), mRNA Length = 1207 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 56 agctcgggaaaggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccga 115 |||| |||||||| |||||| ||||||||||| | |||| || |||| | ||| ||| Sbjct: 452 agctggggaaaggggactggagaggcatctccaagaactttgtgaccagcaggacggcga 511 Query: 116 cgcaggtggccagccacgcccaaaagtacttcctccggcag 156 | |||||||||||||||||||| |||||||||||||||||| Sbjct: 512 ctcaggtggccagccacgcccagaagtacttcctccggcag 552
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 56 agctcgggaaaggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccga 115 |||| |||||||| |||||| ||||||||||| | |||| || |||| | ||| ||| Sbjct: 88145 agctggggaaaggggactggagaggcatctccaagaactttgtgaccagcaggacggcga 88086 Query: 116 cgcaggtggccagccacgcccaaaagtacttcctccggcag 156 | |||||||||||||||||||| |||||||||||||||||| Sbjct: 88085 ctcaggtggccagccacgcccagaagtacttcctccggcag 88045
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 56 agctcgggaaaggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccga 115 |||| |||||||| |||||| ||||||||||| | |||| || |||| | ||| ||| Sbjct: 21656241 agctggggaaaggggactggagaggcatctccaagaactttgtgaccagcaggacggcga 21656182 Query: 116 cgcaggtggccagccacgcccaaaagtacttcctccggcag 156 | |||||||||||||||||||| |||||||||||||||||| Sbjct: 21656181 ctcaggtggccagccacgcccagaagtacttcctccggcag 21656141
>dbj|AK121235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093N04, full insert sequence Length = 1142 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 56 agctcgggaaaggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccga 115 |||| |||||||| |||||| ||||||||||| | |||| || |||| | ||| ||| Sbjct: 471 agctggggaaaggggactggagaggcatctccaagaactttgtgaccagcaggacggcga 530 Query: 116 cgcaggtggccagccacgcccaaaagtacttcctccggcag 156 | |||||||||||||||||||| |||||||||||||||||| Sbjct: 531 ctcaggtggccagccacgcccagaagtacttcctccggcag 571
>emb|AJ303355.1|HVU303355 Hordeum vulgare cv. Haisa mRNA for MCB2 protein Length = 1208 Score = 81.8 bits (41), Expect = 2e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 55 aagctcgggaaaggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccg 114 |||||||| || |||||||||||||| ||||||||| || |||||| || || || ||| Sbjct: 417 aagctcggcaagggcgactggcgaggtatctcccggagctacgtcacgactcgaaccccg 476 Query: 115 acgcaggtggccagccacgcccaaaagtacttcctccggcaggccggcctcgcgcagaag 174 || ||||| ||||||||||| || |||| ||||||| ||||| | || | | | ||||| Sbjct: 477 acacaggttgccagccacgcgcagaagttcttcctcaggcagagcagcatggggaagaag 536 Query: 175 aagcggcgctccagcctcttcgacgtggt 203 ||||| || ||||||||||| ||| |||| Sbjct: 537 aagcgccgatccagcctctttgacatggt 565
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 56 agctcgggaaaggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccga 115 |||| |||||||| |||||| ||||||||||| | |||| || |||| | ||| ||| Sbjct: 21667904 agctggggaaaggggactggagaggcatctccaagaactttgtgaccagcaggacggcga 21667845 Query: 116 cgcaggtggccagccacgcccaaaagtacttcctccggcag 156 | |||||||||||||||||||| |||||||||||||||||| Sbjct: 21667844 ctcaggtggccagccacgcccagaagtacttcctccggcag 21667804
>gb|AY151043.1| Oryza sativa (japonica cultivar-group) transcription factor MYBS2 mRNA, complete cds Length = 985 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 56 agctcgggaaaggcgactggcgaggcatctcccggcacttcgtcaccacgcgcacgccga 115 |||| |||||||| |||||| ||||||||||| | |||| || |||| | ||| ||| Sbjct: 249 agctggggaaaggggactggagaggcatctccaagaactttgtgaccagcaggacggcga 308 Query: 116 cgcaggtggccagccacgcccaaaagtacttcctccggcag 156 | |||||||||||||||||||| |||||||||||||||||| Sbjct: 309 ctcaggtggccagccacgcccagaagtacttcctccggcag 349
>ref|NM_190722.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 522 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 103 acgcgcacgccgacgcaggtggccagccacgcccaaaagtacttcctccggcaggcc 159 ||||| ||||||||||||||||| |||||||| || ||||||||| ||||||||||| Sbjct: 409 acgcggacgccgacgcaggtggcgagccacgcgcagaagtacttcatccggcaggcc 465
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 103 acgcgcacgccgacgcaggtggccagccacgcccaaaagtacttcctccggcaggcc 159 ||||| ||||||||||||||||| |||||||| || ||||||||| ||||||||||| Sbjct: 64345 acgcggacgccgacgcaggtggcgagccacgcgcagaagtacttcatccggcaggcc 64401
>dbj|AK111571.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071A13, full insert sequence Length = 1030 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 103 acgcgcacgccgacgcaggtggccagccacgcccaaaagtacttcctccggcaggcc 159 ||||| ||||||||||||||||| |||||||| || ||||||||| ||||||||||| Sbjct: 524 acgcggacgccgacgcaggtggcgagccacgcgcagaagtacttcatccggcaggcc 580
>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01, complete sequence Length = 126532 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 109 acgccgacgcaggtggccagccacgcccaaaagtacttcctccggc 154 |||||||||||||||||||||||||| || ||||||||| |||||| Sbjct: 56484 acgccgacgcaggtggccagccacgcgcagaagtacttcatccggc 56439
>dbj|AK068138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135D01, full insert sequence Length = 1988 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 109 acgccgacgcaggtggccagccacgcccaaaagtacttcctccggc 154 |||||||||||||||||||||||||| || ||||||||| |||||| Sbjct: 948 acgccgacgcaggtggccagccacgcgcagaagtacttcatccggc 993
>ref|NM_190651.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 109 acgccgacgcaggtggccagccacgcccaaaagtacttcctccg 152 |||||||||||||||||||||||||| || ||||||||| |||| Sbjct: 511 acgccgacgcaggtggccagccacgcgcagaagtacttcatccg 554
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 92 acttcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagtacttc 147 ||||||||| | |||| ||||||||||||||||| |||||||| || ||||||||| Sbjct: 16212961 acttcgtcatctcgcggacgccgacgcaggtggcgagccacgcgcagaagtacttc 16212906 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cctccggcaggccggcctcg 166 |||||||||||||||||||| Sbjct: 26188585 cctccggcaggccggcctcg 26188604
>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529E05 Length = 134982 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 109 acgccgacgcaggtggccagccacgcccaaaagtacttcctccg 152 |||||||||||||||||||||||||| || ||||||||| |||| Sbjct: 84162 acgccgacgcaggtggccagccacgcgcagaagtacttcatccg 84119
>dbj|AK111988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C10, full insert sequence Length = 1502 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 109 acgccgacgcaggtggccagccacgcccaaaagtacttcctccg 152 |||||||||||||||||||||||||| || ||||||||| |||| Sbjct: 591 acgccgacgcaggtggccagccacgcgcagaagtacttcatccg 634
>emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062B06, complete sequence Length = 187154 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 92 acttcgtcaccacgcgcacgccgacgcaggtggccagccacgcccaaaagtacttc 147 ||||||||| | |||| ||||||||||||||||| |||||||| || ||||||||| Sbjct: 57876 acttcgtcatctcgcggacgccgacgcaggtggcgagccacgcgcagaagtacttc 57821
>ref|NM_193688.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 921 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 70 gactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagc 129 |||||||| ||||||| || ||||||||| | |||| ||||| ||||||||||| ||| Sbjct: 487 gactggcggagcatctcgcgcaacttcgtcatctcgcggacgccaacgcaggtggcgagc 546 Query: 130 cacgcccaaaagtacttcctccg 152 ||||| || ||||||||| |||| Sbjct: 547 cacgcgcagaagtacttcatccg 569
>dbj|AP004611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1005_B10 Length = 142680 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 70 gactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagc 129 |||||||| ||||||| || ||||||||| | |||| ||||| ||||||||||| ||| Sbjct: 139565 gactggcggagcatctcgcgcaacttcgtcatctcgcggacgccaacgcaggtggcgagc 139624 Query: 130 cacgcccaaaagtacttcctccg 152 ||||| || ||||||||| |||| Sbjct: 139625 cacgcgcagaagtacttcatccg 139647
>dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1249E06 Length = 126534 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 70 gactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagc 129 |||||||| ||||||| || ||||||||| | |||| ||||| ||||||||||| ||| Sbjct: 73636 gactggcggagcatctcgcgcaacttcgtcatctcgcggacgccaacgcaggtggcgagc 73695 Query: 130 cacgcccaaaagtacttcctccg 152 ||||| || ||||||||| |||| Sbjct: 73696 cacgcgcagaagtacttcatccg 73718
>dbj|AK068565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154G12, full insert sequence Length = 1329 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 70 gactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagc 129 |||||||| ||||||| || ||||||||| | |||| ||||| ||||||||||| ||| Sbjct: 521 gactggcggagcatctcgcgcaacttcgtcatctcgcggacgccaacgcaggtggcgagc 580 Query: 130 cacgcccaaaagtacttcctccg 152 ||||| || ||||||||| |||| Sbjct: 581 cacgcgcagaagtacttcatccg 603
>gb|AY151042.1| Oryza sativa (japonica cultivar-group) transcription factor MYBS1 mRNA, complete cds Length = 1330 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 70 gactggcgaggcatctcccggcacttcgtcaccacgcgcacgccgacgcaggtggccagc 129 |||||||| ||||||| || ||||||||| | |||| ||||| ||||||||||| ||| Sbjct: 506 gactggcggagcatctcgcgcaacttcgtcatctcgcggacgccaacgcaggtggcgagc 565 Query: 130 cacgcccaaaagtacttcctccg 152 ||||| || ||||||||| |||| Sbjct: 566 cacgcgcagaagtacttcatccg 588
>ref|NM_125280.3| Arabidopsis thaliana DNA binding / transcription factor AT5G58900 mRNA, complete cds Length = 1686 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 agccacgcccaaaagtacttcctccggca 155 ||||||||||||||||||||| ||||||| Sbjct: 1208 agccacgcccaaaagtacttcatccggca 1236
>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14, complete sequence Length = 185623 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 103 acgcgcacgccgacgcaggtggccagccacgcccaaaagtacttc 147 ||||| || |||||||||||||| |||||||| ||||||| |||| Sbjct: 58936 acgcggaccccgacgcaggtggcgagccacgcacaaaagttcttc 58892
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 103 acgcgcacgccgacgcaggtggccagccacgcccaaaagtacttc 147 ||||| || |||||||||||||| |||||||| ||||||| |||| Sbjct: 98163 acgcggaccccgacgcaggtggcgagccacgcacaaaagttcttc 98119
>gb|AY519533.1| Arabidopsis thaliana MYB transcription factor (At5g58900) mRNA, complete cds Length = 867 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 agccacgcccaaaagtacttcctccggca 155 ||||||||||||||||||||| ||||||| Sbjct: 541 agccacgcccaaaagtacttcatccggca 569
>emb|BX831142.1|CNS0A296 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1667 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 agccacgcccaaaagtacttcctccggca 155 ||||||||||||||||||||| ||||||| Sbjct: 1208 agccacgcccaaaagtacttcatccggca 1236
>gb|BT005473.1| Arabidopsis thaliana clone U51211 putative I-box binding factor (At5g58900) mRNA, complete cds Length = 898 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 agccacgcccaaaagtacttcctccggca 155 ||||||||||||||||||||| ||||||| Sbjct: 541 agccacgcccaaaagtacttcatccggca 569
>dbj|AK118891.1| Arabidopsis thaliana At5g58900 mRNA for putative I-box binding factor, complete cds, clone: RAFL21-22-M07 Length = 1640 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 agccacgcccaaaagtacttcctccggca 155 ||||||||||||||||||||| ||||||| Sbjct: 1162 agccacgcccaaaagtacttcatccggca 1190
>dbj|AB016885.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19M22 Length = 77758 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 127 agccacgcccaaaagtacttcctccggca 155 ||||||||||||||||||||| ||||||| Sbjct: 36527 agccacgcccaaaagtacttcatccggca 36499
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 117 gcaggtggccagccacgcccaaaagtacttcc 148 ||||||| ||||||||||||| |||||||||| Sbjct: 3706703 gcaggtgtccagccacgcccagaagtacttcc 3706672 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 117 gcaggtggccagccacgcccaaaagtacttcc 148 ||||||| ||||||||||||| |||||||||| Sbjct: 3701673 gcaggtgtccagccacgcccagaagtacttcc 3701642
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 117 gcaggtggccagccacgcccaaaagtacttcc 148 ||||||| ||||||||||||| |||||||||| Sbjct: 100931 gcaggtgtccagccacgcccagaagtacttcc 100900 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 117 gcaggtggccagccacgcccaaaagtacttcc 148 ||||||| ||||||||||||| |||||||||| Sbjct: 95901 gcaggtgtccagccacgcccagaagtacttcc 95870
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 ccggcaggccggcctcgcgcagaa 173 |||||||||||||||||||||||| Sbjct: 1170660 ccggcaggccggcctcgcgcagaa 1170637
>ref|NM_180227.1| Arabidopsis thaliana DNA binding / transcription factor AT3G11280 transcript variant AT3G11280.2 mRNA, complete cds Length = 1117 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 109 acgccgacgcaggtggccagccacgcccaaaagta 143 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 584 acgccaacgcaagtggcgagccacgcccaaaagta 618
>ref|NM_111963.2| Arabidopsis thaliana DNA binding / transcription factor AT3G11280 transcript variant AT3G11280.1 mRNA, complete cds Length = 1242 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 109 acgccgacgcaggtggccagccacgcccaaaagta 143 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 709 acgccaacgcaagtggcgagccacgcccaaaagta 743
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 297 tgctctttccctcggcgccagcc 319 ||||||||||||||||||||||| Sbjct: 2225120 tgctctttccctcggcgccagcc 2225098
>gb|AY550308.1| Arabidopsis thaliana MYB transcription factor (At3g11280) mRNA, complete cds Length = 792 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 109 acgccgacgcaggtggccagccacgcccaaaagta 143 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 481 acgccaacgcaagtggcgagccacgcccaaaagta 515
>gb|AY091265.1| Arabidopsis thaliana putative MYB-family transcription factor (At3g11280) mRNA, complete cds Length = 823 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 109 acgccgacgcaggtggccagccacgcccaaaagta 143 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 481 acgccaacgcaagtggcgagccacgcccaaaagta 515
>gb|AY056180.1| Arabidopsis thaliana putative MYB-family transcription factor (At3g11280) mRNA, complete cds Length = 1071 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 109 acgccgacgcaggtggccagccacgcccaaaagta 143 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 584 acgccaacgcaagtggcgagccacgcccaaaagta 618
>emb|BX824021.1|CNS0A6TB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH15ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1466 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 109 acgccgacgcaggtggccagccacgcccaaaagta 143 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 966 acgccaacgcaagtggcgagccacgcccaaaagta 1000
>emb|BX824225.1|CNS0A6OY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZH04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1409 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 109 acgccgacgcaggtggccagccacgcccaaaagta 143 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 1010 acgccaacgcaagtggcgagccacgcccaaaagta 1044
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 109 acgccgacgcaggtggccagccacgcccaaaagta 143 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 70954 acgccaacgcaagtggcgagccacgcccaaaagta 70920
>gb|AY084487.1| Arabidopsis thaliana clone 109398 mRNA, complete sequence Length = 1169 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 109 acgccgacgcaggtggccagccacgcccaaaagta 143 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 671 acgccaacgcaagtggcgagccacgcccaaaagta 705
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 149 tccggcaggccggcctcgcgcag 171 ||||||||||||||||||||||| Sbjct: 3059296 tccggcaggccggcctcgcgcag 3059274
>emb|Z70269.1|CEZK1086 Caenorhabditis elegans Cosmid ZK1086, complete sequence Length = 17664 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 522 cgccggttcgtcgccgtcgccg 543 |||||||||||||||||||||| Sbjct: 2416 cgccggttcgtcgccgtcgccg 2437
>emb|AL160057.11| Human DNA sequence from clone RP11-25C18 on chromosome 1q31.1-31.3, complete sequence Length = 107328 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 gcccaaaagtacttcctccggc 154 |||||||||||||||||||||| Sbjct: 57786 gcccaaaagtacttcctccggc 57807
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ccagccggccgaggccggacgc 335 |||||||||||||||||||||| Sbjct: 1194193 ccagccggccgaggccggacgc 1194172
>gb|AF040654.3| Caenorhabditis elegans cosmid R06B10, complete sequence Length = 40468 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 522 cgccggttcgtcgccgtcgccg 543 |||||||||||||||||||||| Sbjct: 5238 cgccggttcgtcgccgtcgccg 5259
>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002A19, complete sequence Length = 139052 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 187 agcctcttcgacgtggtcgagaaga 211 |||||||||||||||||||| |||| Sbjct: 58196 agcctcttcgacgtggtcgacaaga 58172
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 cgatcagcaggccggtgccgc 521 ||||||||||||||||||||| Sbjct: 1893189 cgatcagcaggccggtgccgc 1893169
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 gcgccagccggccgaggccgg 331 ||||||||||||||||||||| Sbjct: 1707320 gcgccagccggccgaggccgg 1707300
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 cgatcagcaggccggtgccgc 521 ||||||||||||||||||||| Sbjct: 1536696 cgatcagcaggccggtgccgc 1536716
>emb|Z98050.1|HS451B15 Human DNA sequence from clone RP3-451B15 on chromosome 6p24 Contains the 3' end of the HIVEP1 gene for human immunodeficiency virus type I enhancer-binding protein 1, the EDN1 gene for endothelin 1 (ET1) and a SMT3 suppressor of mif two 3 homolog 1 (yeast) (SMT3H1) pseudogene, complete sequence Length = 186510 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 gttccctgctctttccctcgg 311 ||||||||||||||||||||| Sbjct: 87594 gttccctgctctttccctcgg 87614
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 gcgccagccggccgaggccgg 331 ||||||||||||||||||||| Sbjct: 3042172 gcgccagccggccgaggccgg 3042152
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 cgatcagcaggccggtgccgc 521 ||||||||||||||||||||| Sbjct: 1423784 cgatcagcaggccggtgccgc 1423804
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 atcagcaggccggtgccgccg 523 ||||||||||||||||||||| Sbjct: 882351 atcagcaggccggtgccgccg 882371
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 cctccggcaggccggcctcgcgcag 171 |||||||||| |||||||||||||| Sbjct: 177395 cctccggcagcccggcctcgcgcag 177371
>gb|AE012518.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 426 of 460 of the complete genome Length = 10619 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cggcaggccggcctcgcgcag 171 ||||||||||||||||||||| Sbjct: 3561 cggcaggccggcctcgcgcag 3581
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cggcaggccggcctcgcgcag 171 ||||||||||||||||||||| Sbjct: 4786065 cggcaggccggcctcgcgcag 4786085
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 gcgccagccggccgaggccgg 331 ||||||||||||||||||||| Sbjct: 2190829 gcgccagccggccgaggccgg 2190809
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 187 agcctcttcgacgtggtcgagaaga 211 |||||||||||||||||||| |||| Sbjct: 17897911 agcctcttcgacgtggtcgacaaga 17897887 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 517 gccgccgccggttcgtcgccgtcg 540 ||||||||||| |||||||||||| Sbjct: 17237268 gccgccgccggatcgtcgccgtcg 17237291 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 agcctcttcgacgtggtcga 206 |||||||||||||||||||| Sbjct: 15785310 agcctcttcgacgtggtcga 15785329
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 528 ttcgtcgccgtcgccgaggac 548 ||||||||||||||||||||| Sbjct: 1453304 ttcgtcgccgtcgccgaggac 1453324 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gcctcttcgacgtggtcgag 207 |||||||||||||||||||| Sbjct: 7345698 gcctcttcgacgtggtcgag 7345717 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ttcgtcgccgtcgccgagga 547 |||||||||||||||||||| Sbjct: 6208964 ttcgtcgccgtcgccgagga 6208983 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tctcccggcacttcgtcacc 102 |||||||||||||||||||| Sbjct: 3981735 tctcccggcacttcgtcacc 3981716 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 ttcgtcgccgtcgccgagga 547 |||||||||||||||||||| Sbjct: 1667613 ttcgtcgccgtcgccgagga 1667594
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 gccgccggttcgtcgccgtcgccga 544 ||||||| ||||||||||||||||| Sbjct: 5809973 gccgccgcttcgtcgccgtcgccga 5809997
>gb|AY108042.1| Zea mays PCO071771 mRNA sequence Length = 1197 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 cgtcgccgtcgccgaggacgc 550 ||||||||||||||||||||| Sbjct: 143 cgtcgccgtcgccgaggacgc 163
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 187 agcctcttcgacgtggtcgagaaga 211 |||||||||||||||||||| |||| Sbjct: 17991321 agcctcttcgacgtggtcgacaaga 17991297 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 517 gccgccgccggttcgtcgccgtcg 540 ||||||||||| |||||||||||| Sbjct: 17332454 gccgccgccggatcgtcgccgtcg 17332477 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 agcctcttcgacgtggtcga 206 |||||||||||||||||||| Sbjct: 15872687 agcctcttcgacgtggtcga 15872706
>emb|CT009684.7| Mouse DNA sequence from clone RP23-127L21 on chromosome 13, complete sequence Length = 205067 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 ccttccctgggcctggtggca 429 ||||||||||||||||||||| Sbjct: 72078 ccttccctgggcctggtggca 72058
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gtacttcctccggcaggccg 160 |||||||||||||||||||| Sbjct: 26363 gtacttcctccggcaggccg 26382
>ref|XM_450862.1| Oryza sativa (japonica cultivar-group), mRNA Length = 282 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 515 gtgccgccgccggtt--cgtcgccgtcgccg 543 ||||||||||||||| |||||||||||||| Sbjct: 22 gtgccgccgccggttgccgtcgccgtcgccg 52
>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0019E05, complete sequence Length = 129021 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 517 gccgccgccggttcgtcgccgtcg 540 ||||||||||| |||||||||||| Sbjct: 112070 gccgccgccggatcgtcgccgtcg 112093
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 ttcgtcgccgtcgccgagga 547 |||||||||||||||||||| Sbjct: 4003196 ttcgtcgccgtcgccgagga 4003215
>gb|AC005606.3| Homo sapiens chromosome 16, P1 clone 109-8C (LANL), complete sequence Length = 80662 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tcgcgtcgacggccgcccgg 495 |||||||||||||||||||| Sbjct: 78987 tcgcgtcgacggccgcccgg 78968
>gb|AC131592.10| Mus musculus chromosome 1, clone RP24-547I3, complete sequence Length = 154667 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 cgaatcctcctcctcggcag 453 |||||||||||||||||||| Sbjct: 40869 cgaatcctcctcctcggcag 40888
>ref|XM_425785.1| PREDICTED: Gallus gallus similar to Regulating synaptic membrane exocytosis protein 3 (Nim3) (Rab-3 interacting molecule 3) (RIM 3) (RIM3 gamma) (LOC428226), mRNA Length = 639 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 aagaagcggcgctccagcct 191 |||||||||||||||||||| Sbjct: 130 aagaagcggcgctccagcct 149
>ref|XM_593413.2| PREDICTED: Bos taurus similar to zyg-11 homolog B (C. elegans)-like (LOC540351), mRNA Length = 4040 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tccctccttccctgggcctg 423 |||||||||||||||||||| Sbjct: 3728 tccctccttccctgggcctg 3747
>gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete sequence Length = 385816 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 aagaagcggcgctccagcct 191 |||||||||||||||||||| Sbjct: 39723 aagaagcggcgctccagcct 39704
>gb|AC135398.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079N13, complete sequence Length = 140946 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 agcctcttcgacgtggtcga 206 |||||||||||||||||||| Sbjct: 37004 agcctcttcgacgtggtcga 37023
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 agcctcttcgacgtggtcga 206 |||||||||||||||||||| Sbjct: 11211033 agcctcttcgacgtggtcga 11211052
>gb|AC134459.4| Mus musculus BAC clone RP23-360L15 from chromosome 8, complete sequence Length = 211773 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ctgggcctggtggcaaatgc 434 |||||||||||||||||||| Sbjct: 173542 ctgggcctggtggcaaatgc 173523
>gb|AC115073.9| Mus musculus chromosome 8, clone RP24-417J18, complete sequence Length = 161625 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ctgggcctggtggcaaatgc 434 |||||||||||||||||||| Sbjct: 33218 ctgggcctggtggcaaatgc 33199
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 ccgatcagcaggccggtgccgccg 523 ||||||||||||||| |||||||| Sbjct: 648834 ccgatcagcaggccgatgccgccg 648811
>gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, complete sequence Length = 72483 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 tcgcgtcgacggccgcccgg 495 |||||||||||||||||||| Sbjct: 71204 tcgcgtcgacggccgcccgg 71223
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 gcacgccgacgcaggtggccagcc 130 |||||||| ||||||||||||||| Sbjct: 472686 gcacgccggcgcaggtggccagcc 472709
>ref|XM_501889.1| Yarrowia lipolytica CLIB122, YALI0C16027g predicted mRNA Length = 648 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 atcctcctcctcggcaggcacctg 460 |||||||||||| ||||||||||| Sbjct: 600 atcctcctcctcagcaggcacctg 577
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 gtacttcctccggcaggccg 160 |||||||||||||||||||| Sbjct: 91319 gtacttcctccggcaggccg 91300
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 ccggtgccgccgccggttcg 531 |||||||||||||||||||| Sbjct: 1938864 ccggtgccgccgccggttcg 1938845
>emb|X61084.1|CGRHOD C.griseus rhodopsin gene for opsin protein Length = 11931 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 ctgacctggagctcaagatc 477 |||||||||||||||||||| Sbjct: 9996 ctgacctggagctcaagatc 9977
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 ccgatcagcaggccggtgccgccg 523 ||||||||||||||| |||||||| Sbjct: 297763 ccgatcagcaggccgatgccgccg 297740
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 ccgatcagcaggccggtgccgccg 523 ||||||||||||||| |||||||| Sbjct: 266272 ccgatcagcaggccgatgccgccg 266249
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 ccgatcagcaggccggtgccgccg 523 ||||||||||||||| |||||||| Sbjct: 263907 ccgatcagcaggccgatgccgccg 263930
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccacgcgcacgccgacgcag 120 |||||||||||||||||||| Sbjct: 285498 ccacgcgcacgccgacgcag 285479
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 528 ttcgtcgccgtcgccgaggacgcc 551 |||||||||| ||||||||||||| Sbjct: 53619 ttcgtcgccgccgccgaggacgcc 53642
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 ttcgtcgccgtcgccgagga 547 |||||||||||||||||||| Sbjct: 190563 ttcgtcgccgtcgccgagga 190544
>emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065J09, complete sequence Length = 117443 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cctccggcaggccggcctcg 166 |||||||||||||||||||| Sbjct: 75770 cctccggcaggccggcctcg 75789
>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0011G21, from chromosome 3, complete sequence Length = 142401 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 agcctcttcgacgtggtcga 206 |||||||||||||||||||| Sbjct: 124390 agcctcttcgacgtggtcga 124409
>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0085H08, from chromosome 3, complete sequence Length = 126708 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 agcctcttcgacgtggtcga 206 |||||||||||||||||||| Sbjct: 70015 agcctcttcgacgtggtcga 69996
>ref|XM_939689.1| PREDICTED: Homo sapiens neuropeptide W (NPW), mRNA Length = 823 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tcgcgtcgacggccgcccgg 495 |||||||||||||||||||| Sbjct: 190 tcgcgtcgacggccgcccgg 171
>ref|XM_496111.2| PREDICTED: Homo sapiens neuropeptide W (NPW), mRNA Length = 823 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tcgcgtcgacggccgcccgg 495 |||||||||||||||||||| Sbjct: 190 tcgcgtcgacggccgcccgg 171
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 104 cgcgcacgccgacgcaggtggccagccacgcc 135 |||||||||||||| ||||||||| ||||||| Sbjct: 5052821 cgcgcacgccgacg-aggtggccacccacgcc 5052791 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ccgccggttcgtcgccgtcg 540 |||||||||||||||||||| Sbjct: 1597413 ccgccggttcgtcgccgtcg 1597432
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gccgaggccggacgcggcgc 340 |||||||||||||||||||| Sbjct: 2607849 gccgaggccggacgcggcgc 2607868
>gb|DQ067263.1| Kocuria rosea maltooligosyl trehalose synthase (treY) gene, partial cds Length = 2100 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 gccgtcgccgaggacgccct 553 |||||||||||||||||||| Sbjct: 808 gccgtcgccgaggacgccct 827
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 517 gccgccgccggttcgtcgccgtcg 540 ||||||||||| |||||||||||| Sbjct: 6121764 gccgccgccggatcgtcgccgtcg 6121741
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 515 gtgccgccgccggtt--cgtcgccgtcgccg 543 ||||||||||||||| |||||||||||||| Sbjct: 13315124 gtgccgccgccggttgccgtcgccgtcgccg 13315154
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 agcctcttcgacgtggtcga 206 |||||||||||||||||||| Sbjct: 5770066 agcctcttcgacgtggtcga 5770047
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 agcctcttcgacgtggtcga 206 |||||||||||||||||||| Sbjct: 11207796 agcctcttcgacgtggtcga 11207815
>gb|AC114272.4| Homo sapiens chromosome 19 clone LLNLR_296F4, complete sequence Length = 11699 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 ctgggcctggtggcaaatgc 434 |||||||||||||||||||| Sbjct: 597 ctgggcctggtggcaaatgc 616
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 520 gccgccggttcgtcgccgtcgccg 543 |||||||| ||||||||||||||| Sbjct: 5999445 gccgccggatcgtcgccgtcgccg 5999468 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cggcaggccggcctcgcgca 170 |||||||||||||||||||| Sbjct: 1479910 cggcaggccggcctcgcgca 1479891
>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0055N01 Length = 154783 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 515 gtgccgccgccggtt--cgtcgccgtcgccg 543 ||||||||||||||| |||||||||||||| Sbjct: 136558 gtgccgccgccggttgccgtcgccgtcgccg 136588
>gb|AE005126.1| Halobacterium sp. NRC-1 section 157 of 170 of the complete genome Length = 10575 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ccgccggttcgtcgccgtcg 540 |||||||||||||||||||| Sbjct: 4357 ccgccggttcgtcgccgtcg 4376
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0094P23 Length = 149341 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 agcctcttcgacgtggtcga 206 |||||||||||||||||||| Sbjct: 124691 agcctcttcgacgtggtcga 124672
>dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0556A11 Length = 138096 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 agcctcttcgacgtggtcga 206 |||||||||||||||||||| Sbjct: 24211 agcctcttcgacgtggtcga 24192
>ref|XM_553017.1| Anopheles gambiae str. PEST ENSANGP00000025821 (ENSANGG00000024557), partial mRNA Length = 1044 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cacgccgacgcaggtggcca 127 |||||||||||||||||||| Sbjct: 345 cacgccgacgcaggtggcca 364
>ref|XM_321208.2| Anopheles gambiae str. PEST ENSANGP00000020095 (ENSANGG00000017606), partial mRNA Length = 1515 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 cgatcagcaggccggtgccg 520 |||||||||||||||||||| Sbjct: 355 cgatcagcaggccggtgccg 336
>dbj|AK064890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K17, full insert sequence Length = 2932 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 agcctcttcgacgtggtcga 206 |||||||||||||||||||| Sbjct: 124 agcctcttcgacgtggtcga 143
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 gatcagcaggccggtgccgc 521 |||||||||||||||||||| Sbjct: 2123144 gatcagcaggccggtgccgc 2123125
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 517 gccgccgccggttcgtcgccgtcg 540 ||||||||||| |||||||||||| Sbjct: 6121666 gccgccgccggatcgtcgccgtcg 6121643
>emb|BX664712.3|CNS09SC2 Oryza sativa chromosome 12, . BAC B1373G08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131531 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 517 gccgccgccggttcgtcgccgtcg 540 ||||||||||| |||||||||||| Sbjct: 18773 gccgccgccggatcgtcgccgtcg 18750
>dbj|AB084276.1| Homo sapiens prepro-NPW mRNA for prepro-Neuropeptide W polypeptide, partial cds Length = 719 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tcgcgtcgacggccgcccgg 495 |||||||||||||||||||| Sbjct: 157 tcgcgtcgacggccgcccgg 138
>gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complete sequence Length = 167731 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 ctgacctggagctcaagatc 477 |||||||||||||||||||| Sbjct: 17963 ctgacctggagctcaagatc 17982
>gb|AC139320.4| Mus musculus BAC clone RP24-410G8 from 9, complete sequence Length = 176888 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 tccctccttccctgggcctggtgg 427 ||||||||| |||||||||||||| Sbjct: 87234 tccctccttgcctgggcctggtgg 87211
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 atcctcctcctcggcaggcacctg 460 |||||||||||| ||||||||||| Sbjct: 2276306 atcctcctcctcagcaggcacctg 2276283
>gb|AC004030.2| Homo sapiens DNA from chromosome 19, cosmid F21856, complete sequence Length = 37631 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 ctgggcctggtggcaaatgc 434 |||||||||||||||||||| Sbjct: 35463 ctgggcctggtggcaaatgc 35482
>gb|M55171.1|MUSOPS Mouse opsin (MOPS) gene, complete cds Length = 9483 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 ctgacctggagctcaagatc 477 |||||||||||||||||||| Sbjct: 5336 ctgacctggagctcaagatc 5317
>emb|AL365521.1|HST000257 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 2522007 Length = 564 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tcgcgtcgacggccgcccgg 495 |||||||||||||||||||| Sbjct: 352 tcgcgtcgacggccgcccgg 333
>dbj|AB070950.1| Streptomyces avermitilis peptide-1 biosynthetic gene cluster Length = 21391 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tctcccggcacttcgtcacc 102 |||||||||||||||||||| Sbjct: 14457 tctcccggcacttcgtcacc 14476 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,225,326 Number of Sequences: 3902068 Number of extensions: 4225326 Number of successful extensions: 110505 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 104283 Number of HSP's gapped (non-prelim): 6245 length of query: 560 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 537 effective length of database: 17,143,297,704 effective search space: 9205950867048 effective search space used: 9205950867048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
