ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baald15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC153134.5| Mus musculus BAC clone RP24-202N2 from chromosome... 44 0.51
2gb|AC122136.4| Homo sapiens BAC clone RP11-609F13 from 2, comple... 44 0.51
3gb|AC147387.2| Pan troglodytes BAC clone RP43-143N10 from 7, com... 42 2.0
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.0
5gb|AC165172.2| Zea mays clone CH201-171E16, complete sequence 42 2.0
6gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 2.0
7gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence 42 2.0
8gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 2.0
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
10gb|AC027315.3|AC027315 Homo sapiens chromosome 5 clone CTC-293G1... 42 2.0
11gb|AC010382.4|AC010382 Homo sapiens chromosome 5 clone CTD-2068C... 42 2.0
12gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, co... 42 2.0
13gb|AC102481.10| Mus musculus chromosome 1, clone RP24-427A3, com... 40 8.0
14gb|AC119266.14| Mus musculus chromosome 13, clone RP24-321G8, co... 40 8.0
15gb|AC113060.11| Mus musculus chromosome 13, clone RP23-255E18, c... 40 8.0
16gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 8.0
17ref|XM_979844.1| PREDICTED: Mus musculus similar to ribosomal pr... 40 8.0
18ref|XM_979817.1| PREDICTED: Mus musculus similar to ribosomal pr... 40 8.0
19ref|XM_141310.6| PREDICTED: Mus musculus similar to ribosomal pr... 40 8.0
20ref|XM_917314.2| PREDICTED: Mus musculus similar to ribosomal pr... 40 8.0
21gb|AC093536.4| Homo sapiens chromosome 16 clone RP11-744D14, com... 40 8.0
22gb|AC015983.7| Homo sapiens BAC clone RP11-560I19 from 7, comple... 40 8.0
23gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0
24emb|AJ632332.1| Cotesia congregata virus complete genome, segmen... 40 8.0
25gb|AC012572.17| Homo sapiens chromosome 18, clone RP11-123I22, c... 40 8.0
26gb|AY119492.1| Drosophila melanogaster GH08425 full insert cDNA 40 8.0
27ref|NM_167536.2| Drosophila melanogaster CG4678-RB, transcript v... 40 8.0
28ref|NM_132924.2| Drosophila melanogaster CG4678-RA, transcript v... 40 8.0
29ref|NM_001038761.1| Drosophila melanogaster CG4678-RC, transcrip... 40 8.0
30emb|CR406789.1| Gallus gallus finished cDNA, clone ChEST866o7 40 8.0
31gb|AC160408.6| Mus musculus 10 BAC RP23-116I16 (Roswell Park Can... 40 8.0
32dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
34gb|AC022350.2|AC022350 Drosophila melanogaster, chromosome X, re... 40 8.0
35gb|AC092178.4| Homo sapiens BAC clone RP11-627I23 from 2, comple... 40 8.0
36gb|AC092725.3| Homo sapiens chromosome 16 clone RP11-673P17, com... 40 8.0
37gb|AC122281.2| Mus musculus chromosome 16 clone RP23-239I17, com... 40 8.0
38dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
39emb|BX323086.4| Zebrafish DNA sequence from clone DKEY-170I11 in... 40 8.0
40dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
41dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
42dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
43gb|AF141325.2|HSINPPI2 Homo sapiens inositol polyphosphate 1-pho... 40 8.0
44emb|AL929217.14| Zebrafish DNA sequence from clone CH211-148A2, ... 40 8.0
45gb|AC151833.3| Mus musculus BAC clone RP23-374P15 from 14, compl... 40 8.0
46emb|CR854846.8| Zebrafish DNA sequence from clone DKEY-228N9 in ... 40 8.0
47gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 ... 40 8.0
48gb|AC102631.9| Mus musculus chromosome 1, clone RP23-303L3, comp... 40 8.0
49emb|AL807741.8| Mouse DNA sequence from clone RP23-224B9 on chro... 40 8.0
50gb|AC138308.3| Mus musculus BAC clone RP23-286G16 from 14, compl... 40 8.0
51emb|CT025583.7| Mouse DNA sequence from clone RP24-68O11 on chro... 40 8.0
52dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0 
>gb|AC153134.5| Mus musculus BAC clone RP24-202N2 from chromosome 13, complete sequence
          Length = 177669

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 445    tagtatgcaaagcatagtacca 466
              ||||||||||||||||||||||
Sbjct: 129331 tagtatgcaaagcatagtacca 129310
to top
>gb|AC122136.4| Homo sapiens BAC clone RP11-609F13 from 2, complete sequence
          Length = 64085

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 560   ttcactctctctgtcttgctca 581
             ||||||||||||||||||||||
Sbjct: 18746 ttcactctctctgtcttgctca 18725
to top
>gb|AC147387.2| Pan troglodytes BAC clone RP43-143N10 from 7, complete sequence
          Length = 173662

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 133    tctgcatgcatgcctaacttatcaa 157
              ||||||||||| |||||||||||||
Sbjct: 102092 tctgcatgcattcctaacttatcaa 102116
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 127      gctgcatctgcatgcatgcct 147
                |||||||||||||||||||||
Sbjct: 12558912 gctgcatctgcatgcatgcct 12558932



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 127     gctgcatctgcatgcatgcc 146
               ||||||||||||||||||||
Sbjct: 1662922 gctgcatctgcatgcatgcc 1662903
to top
>gb|AC165172.2| Zea mays clone CH201-171E16, complete sequence
          Length = 180971

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   ctgcatctgcatgcatgccta 148
             |||||||||||||||||||||
Sbjct: 38353 ctgcatctgcatgcatgccta 38373
to top
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
             from chromosome 3, complete sequence
          Length = 124550

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 127   gctgcatctgcatgcatgcct 147
             |||||||||||||||||||||
Sbjct: 29029 gctgcatctgcatgcatgcct 29009
to top
>gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence
          Length = 233369

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   ctgcatctgcatgcatgccta 148
             |||||||||||||||||||||
Sbjct: 32279 ctgcatctgcatgcatgccta 32259
to top
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 127    gctgcatctgcatgcatgcct 147
              |||||||||||||||||||||
Sbjct: 118077 gctgcatctgcatgcatgcct 118057
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 127      gctgcatctgcatgcatgcct 147
                |||||||||||||||||||||
Sbjct: 12555675 gctgcatctgcatgcatgcct 12555695



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 127     gctgcatctgcatgcatgcc 146
               ||||||||||||||||||||
Sbjct: 1662920 gctgcatctgcatgcatgcc 1662901
to top
>gb|AC027315.3|AC027315 Homo sapiens chromosome 5 clone CTC-293G12, complete sequence
          Length = 171390

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 358   catcattttcctacttgtcat 378
             |||||||||||||||||||||
Sbjct: 68444 catcattttcctacttgtcat 68464
to top
>gb|AC010382.4|AC010382 Homo sapiens chromosome 5 clone CTD-2068C11, complete sequence
          Length = 151365

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 358   catcattttcctacttgtcat 378
             |||||||||||||||||||||
Sbjct: 16090 catcattttcctacttgtcat 16110
to top
>gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, complete sequence
          Length = 168482

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 236    cttcatttgttctcatttctc 256
              |||||||||||||||||||||
Sbjct: 118983 cttcatttgttctcatttctc 118963
to top
>gb|AC102481.10| Mus musculus chromosome 1, clone RP24-427A3, complete sequence
          Length = 145973

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 475    aaattccagtgcccttgtca 494
              ||||||||||||||||||||
Sbjct: 116593 aaattccagtgcccttgtca 116612
to top
>gb|AC119266.14| Mus musculus chromosome 13, clone RP24-321G8, complete sequence
          Length = 174035

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 552    gccatgcattcactctctctgtct 575
              ||||||||||| ||||||||||||
Sbjct: 137424 gccatgcattctctctctctgtct 137401
to top
>gb|AC113060.11| Mus musculus chromosome 13, clone RP23-255E18, complete sequence
          Length = 192264

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 552    gccatgcattcactctctctgtct 575
              ||||||||||| ||||||||||||
Sbjct: 186649 gccatgcattctctctctctgtct 186672
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 115     gaatctggtgctgctgcatc 134
               ||||||||||||||||||||
Sbjct: 2455606 gaatctggtgctgctgcatc 2455625
to top
>ref|XM_979844.1| PREDICTED: Mus musculus similar to ribosomal protein L27a
           (LOC670208), mRNA
          Length = 520

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 504 gtggcagtgcctcataccaacttt 527
           |||| |||||||||||||||||||
Sbjct: 210 gtggtagtgcctcataccaacttt 187
to top
>ref|XM_979817.1| PREDICTED: Mus musculus similar to ribosomal protein L27a
           (LOC241621), mRNA
          Length = 520

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 504 gtggcagtgcctcataccaacttt 527
           |||| |||||||||||||||||||
Sbjct: 210 gtggtagtgcctcataccaacttt 187
to top
>ref|XM_141310.6| PREDICTED: Mus musculus similar to ribosomal protein L27a
           (LOC241621), mRNA
          Length = 520

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 504 gtggcagtgcctcataccaacttt 527
           |||| |||||||||||||||||||
Sbjct: 210 gtggtagtgcctcataccaacttt 187
to top
>ref|XM_917314.2| PREDICTED: Mus musculus similar to ribosomal protein L27a
           (LOC241621), mRNA
          Length = 520

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 504 gtggcagtgcctcataccaacttt 527
           |||| |||||||||||||||||||
Sbjct: 210 gtggtagtgcctcataccaacttt 187
to top
>gb|AC093536.4| Homo sapiens chromosome 16 clone RP11-744D14, complete sequence
          Length = 199655

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    ctcttcttcaagtatatata 315
              ||||||||||||||||||||
Sbjct: 123290 ctcttcttcaagtatatata 123271
to top
>gb|AC015983.7| Homo sapiens BAC clone RP11-560I19 from 7, complete sequence
          Length = 177476

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    tcactctctctgtcttgctc 580
              ||||||||||||||||||||
Sbjct: 110555 tcactctctctgtcttgctc 110536
to top
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07,
             complete sequence
          Length = 87592

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   gctgcatctgcatgcatgcc 146
             ||||||||||||||||||||
Sbjct: 71144 gctgcatctgcatgcatgcc 71125
to top
>emb|AJ632332.1| Cotesia congregata virus complete genome, segment Circle35
          Length = 11186

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 358 catcattttcctacttgtcatccctatc 385
           |||||||||||| ||||||||| |||||
Sbjct: 88  catcattttcctccttgtcatcgctatc 115
to top
>gb|AC012572.17| Homo sapiens chromosome 18, clone RP11-123I22, complete sequence
          Length = 172637

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    catgctgggttccatcattt 365
              ||||||||||||||||||||
Sbjct: 116645 catgctgggttccatcattt 116626
to top
>gb|AY119492.1| Drosophila melanogaster GH08425 full insert cDNA
          Length = 3282

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 atctggtgctgctgcatctgcatg 140
           |||||||| |||||||||||||||
Sbjct: 372 atctggtgatgctgcatctgcatg 349
to top
>ref|NM_167536.2| Drosophila melanogaster CG4678-RB, transcript variant B (CG4678),
           mRNA
          Length = 2691

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 atctggtgctgctgcatctgcatg 140
           |||||||| |||||||||||||||
Sbjct: 434 atctggtgatgctgcatctgcatg 411
to top
>ref|NM_132924.2| Drosophila melanogaster CG4678-RA, transcript variant A (CG4678),
           mRNA
          Length = 2651

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 atctggtgctgctgcatctgcatg 140
           |||||||| |||||||||||||||
Sbjct: 394 atctggtgatgctgcatctgcatg 371
to top
>ref|NM_001038761.1| Drosophila melanogaster CG4678-RC, transcript variant C (CG4678),
           mRNA
          Length = 3286

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 117 atctggtgctgctgcatctgcatg 140
           |||||||| |||||||||||||||
Sbjct: 394 atctggtgatgctgcatctgcatg 371
to top
>emb|CR406789.1| Gallus gallus finished cDNA, clone ChEST866o7
          Length = 1286

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 gatcatgcagaatttgaaca 347
           ||||||||||||||||||||
Sbjct: 40  gatcatgcagaatttgaaca 21
to top
>gb|AC160408.6| Mus musculus 10 BAC RP23-116I16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 210970

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    cttcttcaagtatatataag 317
              ||||||||||||||||||||
Sbjct: 174008 cttcttcaagtatatataag 173989
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 112     caagaatctggtgctgctgc 131
               ||||||||||||||||||||
Sbjct: 5276297 caagaatctggtgctgctgc 5276278
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 112      caagaatctggtgctgctgc 131
                ||||||||||||||||||||
Sbjct: 21636094 caagaatctggtgctgctgc 21636113
to top
>gb|AC022350.2|AC022350 Drosophila melanogaster, chromosome X, region 15B-15B, BAC clone
             BACR18G21, complete sequence
          Length = 168514

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   atctggtgctgctgcatctgcatg 140
             |||||||| |||||||||||||||
Sbjct: 85934 atctggtgatgctgcatctgcatg 85911
to top
>gb|AC092178.4| Homo sapiens BAC clone RP11-627I23 from 2, complete sequence
          Length = 166299

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 561    tcactctctctgtcttgctc 580
              ||||||||||||||||||||
Sbjct: 102947 tcactctctctgtcttgctc 102966
to top
>gb|AC092725.3| Homo sapiens chromosome 16 clone RP11-673P17, complete sequence
          Length = 205399

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 530   tttggcttctactccatgga 549
             ||||||||||||||||||||
Sbjct: 36058 tttggcttctactccatgga 36039
to top
>gb|AC122281.2| Mus musculus chromosome 16 clone RP23-239I17, complete sequence
          Length = 204608

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 560   ttcactctctctgtcttgct 579
             ||||||||||||||||||||
Sbjct: 59137 ttcactctctctgtcttgct 59118
to top
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0020D05
          Length = 158760

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    caagaatctggtgctgctgc 131
              ||||||||||||||||||||
Sbjct: 125044 caagaatctggtgctgctgc 125063
to top
>emb|BX323086.4| Zebrafish DNA sequence from clone DKEY-170I11 in linkage group 20,
              complete sequence
          Length = 183026

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 562    cactctctctgtcttgctca 581
              ||||||||||||||||||||
Sbjct: 131743 cactctctctgtcttgctca 131762
to top
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0025F02
          Length = 156545

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   caagaatctggtgctgctgc 131
             ||||||||||||||||||||
Sbjct: 17491 caagaatctggtgctgctgc 17510
to top
>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1099H05
          Length = 186036

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    caagaatctggtgctgctgc 131
              ||||||||||||||||||||
Sbjct: 144653 caagaatctggtgctgctgc 144634
to top
>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0610E02
          Length = 135816

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   caagaatctggtgctgctgc 131
             ||||||||||||||||||||
Sbjct: 67885 caagaatctggtgctgctgc 67866
to top
>gb|AF141325.2|HSINPPI2 Homo sapiens inositol polyphosphate 1-phosphatase (INPP1) gene,
             complete cds
          Length = 37294

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 561   tcactctctctgtcttgctc 580
             ||||||||||||||||||||
Sbjct: 26299 tcactctctctgtcttgctc 26318
to top
>emb|AL929217.14| Zebrafish DNA sequence from clone CH211-148A2, complete sequence
          Length = 130060

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 232   ttctcttcatttgttctcatttct 255
             |||| |||||||||||||||||||
Sbjct: 61929 ttctgttcatttgttctcatttct 61952
to top
>gb|AC151833.3| Mus musculus BAC clone RP23-374P15 from 14, complete sequence
          Length = 197918

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 561   tcactctctctgtcttgctc 580
             ||||||||||||||||||||
Sbjct: 36563 tcactctctctgtcttgctc 36582
to top
>emb|CR854846.8| Zebrafish DNA sequence from clone DKEY-228N9 in linkage group 11,
              complete sequence
          Length = 202364

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 562    cactctctctgtcttgctca 581
              ||||||||||||||||||||
Sbjct: 169544 cactctctctgtcttgctca 169563
to top
>gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 of 74 of the complete
             sequence
          Length = 300468

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   atctggtgctgctgcatctgcatg 140
             |||||||| |||||||||||||||
Sbjct: 70373 atctggtgatgctgcatctgcatg 70350
to top
>gb|AC102631.9| Mus musculus chromosome 1, clone RP23-303L3, complete sequence
          Length = 228551

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 475    aaattccagtgcccttgtca 494
              ||||||||||||||||||||
Sbjct: 173875 aaattccagtgcccttgtca 173856
to top
>emb|AL807741.8| Mouse DNA sequence from clone RP23-224B9 on chromosome 2, complete
              sequence
          Length = 165777

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 504    gtggcagtgcctcataccaacttt 527
              |||| |||||||||||||||||||
Sbjct: 112854 gtggtagtgcctcataccaacttt 112877
to top
>gb|AC138308.3| Mus musculus BAC clone RP23-286G16 from 14, complete sequence
          Length = 148679

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 561    tcactctctctgtcttgctc 580
              ||||||||||||||||||||
Sbjct: 110639 tcactctctctgtcttgctc 110658
to top
>emb|CT025583.7| Mouse DNA sequence from clone RP24-68O11 on chromosome 14, complete
             sequence
          Length = 201727

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   ttctcttcatttgttctcat 251
             ||||||||||||||||||||
Sbjct: 85070 ttctcttcatttgttctcat 85051
to top
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   gctgcatctgcatgcatgcc 146
             ||||||||||||||||||||
Sbjct: 75385 gctgcatctgcatgcatgcc 75366


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,503,043
Number of Sequences: 3902068
Number of extensions: 5503043
Number of successful extensions: 106954
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106576
Number of HSP's gapped (non-prelim): 378
length of query: 588
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 565
effective length of database: 17,143,297,704
effective search space: 9685963202760
effective search space used: 9685963202760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top