ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalc15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1035 bits (522), Expect = 0.0 Identities = 551/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 120018 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 119961 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119960 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaag-agacaacc 119902 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119901 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119842 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119841 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119782 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119781 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119722 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119721 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119662 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119661 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119602 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119601 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119542 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119541 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119482 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 119481 tgagccggcgactcata 119465 Score = 1035 bits (522), Expect = 0.0 Identities = 551/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 94876 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 94933 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 94934 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaag-agacaacc 94992 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94993 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95052 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95053 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95112 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95113 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95172 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95173 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95232 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95233 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95292 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95293 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95352 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95353 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95412 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 95413 tgagccggcgactcata 95429
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 118799 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 118742 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 118741 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 118683 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118682 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 118623 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118622 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 118563 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118562 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 118503 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118502 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 118443 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118442 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 118383 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118382 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 118323 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118322 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 118263 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 118262 tgagccggcgactcata 118246
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 929 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 872 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 871 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 813 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 753 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 693 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 633 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 632 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 573 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 513 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 453 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 393 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 392 tgagccggcgactcata 376
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 119883 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 119826 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 119825 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 119767 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119766 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119707 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119706 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119647 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119646 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119587 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119586 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119527 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119526 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119467 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119466 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119407 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119406 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119347 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 119346 tgagccggcgactcata 119330 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 95273 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 95330 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 95331 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 95389 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95449 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95450 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95509 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95510 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95569 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95570 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95629 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95630 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95689 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95690 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95749 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95750 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95809 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 95810 tgagccggcgactcata 95826
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 119883 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 119826 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 119825 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 119767 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119766 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119707 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119706 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119647 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119646 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119587 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119586 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119527 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119526 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119467 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119466 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119407 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119406 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119347 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 119346 tgagccggcgactcata 119330 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 95273 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 95330 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 95331 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 95389 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95449 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95450 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95509 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95510 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95569 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95570 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95629 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95630 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95689 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95690 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95749 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95750 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95809 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 95810 tgagccggcgactcata 95826
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 119832 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 119775 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 119774 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 119716 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119715 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119656 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119655 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119596 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119595 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119536 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119535 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119476 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119475 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119416 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119415 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119356 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119355 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119296 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 119295 tgagccggcgactcata 119279 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 95218 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 95275 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 95276 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 95334 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95335 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95394 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95395 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95454 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95455 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95514 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95515 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95574 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95575 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95634 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95635 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95694 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95695 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95754 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 95755 tgagccggcgactcata 95771
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 31507851 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 31507908 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 31507909 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 31507967 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507968 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 31508027 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508028 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 31508087 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508088 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 31508147 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31508148 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 31508207 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508208 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 31508267 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508268 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 31508327 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508328 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 31508387 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 31508388 tgagccggcgactcata 31508404
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 84745 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 84688 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 84687 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 84629 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84628 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 84569 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84568 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 84509 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84508 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 84449 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 84448 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 84389 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84388 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 84329 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84328 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 84269 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84268 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 84209 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 84208 tgagccggcgactcata 84192
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 119852 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 119795 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 119794 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 119736 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119735 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119676 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119675 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119616 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119615 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119556 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119555 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119496 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119495 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119436 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119435 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119376 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119375 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119316 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 119315 tgagccggcgactcata 119299 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 95266 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 95323 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 95324 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 95382 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95383 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95442 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95443 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95502 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95503 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95562 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95563 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95622 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95623 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95682 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95683 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95742 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95743 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95802 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 95803 tgagccggcgactcata 95819
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 122315 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 122372 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 122373 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 122431 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122432 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 122491 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122492 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 122551 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122552 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 122611 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122612 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 122671 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122672 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 122731 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122732 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 122791 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122792 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 122851 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 122852 tgagccggcgactcata 122868 Score = 1019 bits (514), Expect = 0.0 Identities = 549/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 14040 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 14097 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 14098 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 14156 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14157 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 14216 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14217 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 14276 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14277 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 14336 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 14337 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgt 14396 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14397 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 14456 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14457 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 14516 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14517 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 14576 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 14577 tgagccggcgactcata 14593
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 44843 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 44786 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 44785 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 44727 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44726 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 44667 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44666 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 44607 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44606 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 44547 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 44546 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 44487 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44486 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 44427 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44426 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 44367 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44366 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 44307 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 44306 tgagccggcgactcata 44290 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 20275 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 20332 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 20333 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 20391 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20392 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 20451 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20452 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 20511 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20512 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 20571 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20572 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 20631 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20632 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 20691 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20692 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 20751 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20752 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 20811 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 20812 tgagccggcgactcata 20828
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 58571 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 58514 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 58513 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 58455 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58454 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 58395 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58394 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 58335 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58334 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 58275 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58274 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 58215 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58214 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 58155 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58154 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 58095 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58094 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 58035 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 58034 tgagccggcgactcata 58018
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 1472 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 1415 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 1414 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 1356 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1355 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 1296 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1295 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 1236 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1235 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 1176 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1175 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 1116 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1115 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 1056 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 996 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 936 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 935 tgagccggcgactcata 919
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 9268200 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 9268257 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 9268258 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 9268316 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268317 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9268376 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268377 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9268436 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268437 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9268496 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9268497 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9268556 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268557 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9268616 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268617 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9268676 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268677 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9268736 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 9268737 tgagccggcgactcata 9268753 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 9227700 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 9227757 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 9227758 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 9227816 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227817 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9227876 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227877 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9227936 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227937 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9227996 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9227997 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9228056 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228057 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9228116 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228117 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9228176 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228177 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9228236 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 9228237 tgagccggcgactcata 9228253 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 9164289 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 9164346 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 9164347 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 9164405 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164406 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9164465 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164466 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9164525 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164526 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9164585 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9164586 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9164645 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164646 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9164705 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164706 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9164765 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164766 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9164825 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 9164826 tgagccggcgactcata 9164842 Score = 1019 bits (514), Expect = 0.0 Identities = 549/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 9056114 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 9056171 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 9056172 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 9056230 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056231 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9056290 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056291 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9056350 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056351 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9056410 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 9056411 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgt 9056470 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056471 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9056530 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056531 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9056590 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056591 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9056650 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 9056651 tgagccggcgactcata 9056667 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 402 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 461 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 462 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 508 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 19938185 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 19938242 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 19938243 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 19938301 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938302 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 19938361 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938362 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 19938421 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938422 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 19938481 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19938482 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 19938541 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938542 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 19938601 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938602 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 19938661 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938662 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 19938721 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 19938722 tgagccggcgactcata 19938738 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 10277246 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 10277189 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 10277188 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 10277130 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277129 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10277070 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277069 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10277010 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277009 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10276950 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10276949 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10276890 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276889 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 10276830 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276829 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 10276770 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276769 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 10276710 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 10276709 tgagccggcgactcata 10276693 Score = 1019 bits (514), Expect = 0.0 Identities = 549/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 10387052 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 10387109 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 10387110 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 10387168 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10387228 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10387288 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387289 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10387348 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10387349 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10387408 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387409 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 10387468 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10387469 gtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccg 10387528 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387529 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 10387588 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 10387589 tgagccggcgactcata 10387605 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 420 agtaccgtgagggaaaggtgaaaagaacccc 450 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 245 ttgtgctgctaggcgaagcggttgagtgc 273 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 31598367 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 31598424 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 31598425 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 31598483 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598484 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 31598543 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598544 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 31598603 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598604 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 31598663 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31598664 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 31598723 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598724 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 31598783 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598784 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 31598843 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598844 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 31598903 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 31598904 tgagccggcgactcata 31598920
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 33525683 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 33525740 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 33525741 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 33525799 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525800 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 33525859 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525860 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 33525919 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525920 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 33525979 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33525980 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 33526039 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526040 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 33526099 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526100 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 33526159 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526160 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 33526219 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 33526220 tgagccggcgactcata 33526236 Score = 250 bits (126), Expect = 4e-63 Identities = 132/134 (98%) Strand = Plus / Minus Query: 424 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 483 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 484 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 543 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 544 gccggcgactcata 557 |||||||||||||| Sbjct: 16677981 gccggcgactcata 16677968 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 438 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 497 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 498 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 547 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 450 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 450 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 469 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 47858 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 47801 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 47800 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 47742 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47741 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 47682 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47681 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 47622 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47621 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 47562 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47561 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 47502 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47501 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 47442 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47441 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 47382 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47381 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 47322 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 47321 tgagccggcgactcata 47305
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 70880 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 70937 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 70938 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 70996 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70997 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 71056 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71057 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 71116 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71117 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 71176 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 71177 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 71236 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71237 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 71296 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71297 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 71356 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71357 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 71416 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 71417 tgagccggcgactcata 71433 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 450 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 450 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 123682 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 123625 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 123624 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 123566 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123565 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 123506 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123505 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 123446 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123445 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 123386 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123385 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 123326 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123325 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 123266 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123265 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 123206 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123205 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 123146 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 123145 tgagccggcgactcata 123129 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 99155 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 99212 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 99213 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 99271 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99272 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 99331 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99332 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 99391 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99392 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 99451 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99452 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 99511 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99512 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 99571 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99572 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 99631 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99632 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 99691 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 99692 tgagccggcgactcata 99708
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 52 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 109 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 110 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 168 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 288 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 348 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 349 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 408 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 468 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 528 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 588 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 589 tgagccggcgactcata 605
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 49 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 106 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 107 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 165 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 225 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 285 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 345 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 346 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 405 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 465 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 525 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 585 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 586 tgagccggcgactcata 602
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 19949461 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 19949518 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 19949519 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 19949577 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949578 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 19949637 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949638 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 19949697 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949698 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 19949757 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19949758 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 19949817 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949818 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 19949877 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949878 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 19949937 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949938 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 19949997 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 19949998 tgagccggcgactcata 19950014 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 10283285 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 10283228 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 10283227 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 10283169 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283168 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10283109 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283108 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10283049 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283048 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10282989 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10282988 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10282929 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282928 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 10282869 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282868 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 10282809 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282808 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 10282749 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 10282748 tgagccggcgactcata 10282732 Score = 1019 bits (514), Expect = 0.0 Identities = 549/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 10393091 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 10393148 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 10393149 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 10393207 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393208 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10393267 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393268 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10393327 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393328 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10393387 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10393388 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10393447 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393448 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 10393507 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10393508 gtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccg 10393567 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393568 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 10393627 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 10393628 tgagccggcgactcata 10393644 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 450 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 245 ttgtgctgctaggcgaagcggttgagtgc 273 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 124399 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 124342 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 124341 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 124283 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124282 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 124223 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124222 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 124163 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124162 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 124103 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 124102 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 124043 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124042 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 123983 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123982 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 123923 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123922 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 123863 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 123862 tgagccggcgactcata 123846 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 99832 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 99889 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 99890 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 99948 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99949 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 100008 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100009 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 100068 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100069 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 100128 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100129 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 100188 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100189 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 100248 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100249 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 100308 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100309 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 100368 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 100369 tgagccggcgactcata 100385
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 119826 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 119769 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 119768 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 119710 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119709 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119650 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119649 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119590 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119589 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119530 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119529 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119470 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119469 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119410 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119409 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119350 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119349 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119290 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 119289 tgagccggcgactcata 119273 Score = 1027 bits (518), Expect = 0.0 Identities = 550/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 95213 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 95270 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 95271 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 95329 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95330 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95389 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95449 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95450 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95509 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95510 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95569 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95570 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95629 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95630 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95689 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95690 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95749 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 95750 tgagccggcgactcata 95766
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1019 bits (514), Expect = 0.0 Identities = 549/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 140848 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 140905 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 140906 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 140964 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140965 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 141024 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141025 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 141084 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141085 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 141144 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 141145 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgt 141204 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141205 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 141264 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141265 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 141324 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141325 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 141384 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 141385 tgagccggcgactcata 141401
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1019 bits (514), Expect = 0.0 Identities = 549/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 93444 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 93501 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 93502 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 93560 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93561 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 93620 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93621 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 93680 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93681 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 93740 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 93741 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 93800 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93801 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 93860 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 93861 gtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccg 93920 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93921 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 93980 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 93981 tgagccggcgactcata 93997
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1019 bits (514), Expect = 0.0 Identities = 549/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 27508 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 27565 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 27566 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 27624 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27625 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 27684 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27685 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 27744 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27745 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 27804 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27805 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 27864 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27865 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 27924 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27925 gtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccg 27984 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27985 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 28044 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 28045 tgagccggcgactcata 28061
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1011 bits (510), Expect = 0.0 Identities = 548/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 9242081 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 9242024 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 9242023 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 9241965 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241964 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9241905 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241904 gcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9241845 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241844 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9241785 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9241784 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9241725 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241724 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9241665 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241664 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9241605 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241604 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9241545 Query: 541 tgagccggcgactcata 557 ||||| ||||||||||| Sbjct: 9241544 tgagctggcgactcata 9241528 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 127 actgaaacatcttagtagccagaggaaaagaaag 160 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1011 bits (510), Expect = 0.0 Identities = 548/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 53294 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 53237 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 53236 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 53178 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53177 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 53118 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53117 gcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 53058 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53057 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 52998 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 52997 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 52938 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52937 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 52878 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52877 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 52818 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52817 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 52758 Query: 541 tgagccggcgactcata 557 ||||| ||||||||||| Sbjct: 52757 tgagctggcgactcata 52741
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1011 bits (510), Expect = 0.0 Identities = 548/557 (98%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 9 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 66 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 67 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 125 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 185 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 186 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcagtaca 245 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 305 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 306 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 365 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 425 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 485 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 486 tgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttgaagaa 545 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 546 tgagccggcgactcata 562
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 979 bits (494), Expect = 0.0 Identities = 545/557 (97%), Gaps = 4/557 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 123621 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 123564 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| Sbjct: 123563 cccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaag-agacaacc 123505 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123504 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 123445 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 123444 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaataca 123385 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 123384 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagta 123325 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123324 gccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgt 123266 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123265 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 123206 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123205 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 123146 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123145 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 123086 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 123085 tgagccggcgactcata 123069 Score = 979 bits (494), Expect = 0.0 Identities = 545/557 (97%), Gaps = 4/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 99116 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 99173 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| Sbjct: 99174 cccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaag-agacaacc 99232 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99233 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 99292 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 99293 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaataca 99352 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 99353 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagta 99412 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99413 gccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgt 99471 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99472 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 99531 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99532 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 99591 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99592 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 99651 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 99652 tgagccggcgactcata 99668
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 979 bits (494), Expect = 0.0 Identities = 545/557 (97%), Gaps = 4/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 5469 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 5526 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| Sbjct: 5527 cccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaag-agacaacc 5585 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5586 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 5645 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 5646 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaataca 5705 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 5706 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagta 5765 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5766 gccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgt 5824 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5825 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 5884 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5885 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 5944 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5945 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 6004 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 6005 tgagccggcgactcata 6021
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 979 bits (494), Expect = 0.0 Identities = 545/557 (97%), Gaps = 4/557 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 57 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 114 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| Sbjct: 115 cccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaag-agacaacc 173 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 233 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 234 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaataca 293 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 294 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagta 353 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 354 gccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgt 412 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 472 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 532 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 592 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 593 tgagccggcgactcata 609
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 959 bits (484), Expect = 0.0 Identities = 497/500 (99%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 58 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagaca 117 ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 14 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agaca 72 Query: 118 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 132 Query: 178 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 192 Query: 238 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 252 Query: 298 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 253 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 312 Query: 358 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 372 Query: 418 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 432 Query: 478 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 492 Query: 538 gaatgagccggcgactcata 557 |||||||||||||||||||| Sbjct: 493 gaatgagccggcgactcata 512
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 952 bits (480), Expect = 0.0 Identities = 496/500 (99%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 58 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagaca 117 ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 10 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agaca 68 Query: 118 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 128 Query: 178 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 188 Query: 238 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 248 Query: 298 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 357 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 249 gtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacgtggaatcc 308 Query: 358 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 368 Query: 418 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 428 Query: 478 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 488 Query: 538 gaatgagccggcgactcata 557 |||||||||||||||||||| Sbjct: 489 gaatgagccggcgactcata 508
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 920 bits (464), Expect = 0.0 Identities = 474/476 (99%), Gaps = 1/476 (0%) Strand = Plus / Plus Query: 82 aactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaacatcttag 141 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaag-agacaacctggcgaactgaaacatcttag 59 Query: 142 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 119 Query: 202 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 179 Query: 262 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 239 Query: 322 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 381 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 cgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 299 Query: 382 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 359 Query: 442 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 419 Query: 502 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 475
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 848 bits (428), Expect = 0.0 Identities = 529/557 (94%), Gaps = 7/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 139532 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 139475 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 139474 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 139417 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139416 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 139357 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139356 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 139297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||| | |||||||||||||| | ||||||||| Sbjct: 139296 agcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccagta 139237 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139236 gccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgt 139177 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139176 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 139117 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 139116 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 139057 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 139056 ---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaa 139000 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 138999 tgagccggcgactcata 138983 Score = 848 bits (428), Expect = 0.0 Identities = 529/557 (94%), Gaps = 7/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 110413 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 110470 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 110471 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 110528 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110529 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 110588 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110589 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 110648 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||| | |||||||||||||| | ||||||||| Sbjct: 110649 agcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccagta 110708 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110709 gccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgt 110768 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110769 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 110828 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 110829 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 110888 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 110889 ---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaa 110945 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 110946 tgagccggcgactcata 110962
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 848 bits (428), Expect = 0.0 Identities = 460/467 (98%), Gaps = 3/467 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 53 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 110 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 111 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 169 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 229 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 289 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 349 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 350 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 409 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 469 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 467 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 848 bits (428), Expect = 0.0 Identities = 529/557 (94%), Gaps = 7/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 127810 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 127753 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 127752 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 127695 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 127694 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 127635 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127634 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 127575 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 127574 agcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 127515 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 127514 gccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 127455 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127454 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 127395 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 127394 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 127335 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 127334 ---tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaa 127278 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 127277 tgagccggcgactcata 127261 Score = 848 bits (428), Expect = 0.0 Identities = 529/557 (94%), Gaps = 7/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 107112 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 107169 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 107170 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 107227 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107228 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 107287 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107288 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 107347 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 107348 agcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 107407 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107408 gccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 107467 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107468 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 107527 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 107528 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 107587 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 107588 ---tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaa 107644 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 107645 tgagccggcgactcata 107661
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 848 bits (428), Expect = 0.0 Identities = 529/557 (94%), Gaps = 7/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 134169 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 134112 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 134111 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 134054 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134053 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 133994 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133993 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 133934 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||||||||| | ||||||||| Sbjct: 133933 agcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtccagta 133874 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 133873 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 133814 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133813 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 133754 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 133753 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 133694 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 133693 ---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaa 133637 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 133636 tgagccggcgactcata 133620 Score = 848 bits (428), Expect = 0.0 Identities = 529/557 (94%), Gaps = 7/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 103802 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 103859 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 103860 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 103917 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103918 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 103977 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103978 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 104037 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||||||||| | ||||||||| Sbjct: 104038 agcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtccagta 104097 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104098 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 104157 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104158 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 104217 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 104218 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 104277 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 104278 ---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaa 104334 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 104335 tgagccggcgactcata 104351
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 833 bits (420), Expect = 0.0 Identities = 527/557 (94%), Gaps = 7/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 142054 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 141997 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||| ||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 141996 cccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 141939 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141938 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 141879 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141878 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 141819 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||||||||||| | |||||||||||||| | ||||||||| Sbjct: 141818 agcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccagta 141759 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141758 accgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgt 141699 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 141698 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagta 141639 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 141638 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 141579 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 141578 ---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaa 141522 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 141521 tgagccggcgactcata 141505 Score = 833 bits (420), Expect = 0.0 Identities = 527/557 (94%), Gaps = 7/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 111603 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 111660 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||| ||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 111661 cccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 111718 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111719 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 111778 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111779 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 111838 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||||||||||| | |||||||||||||| | ||||||||| Sbjct: 111839 agcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccagta 111898 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 111899 accgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgt 111958 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111959 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagta 112018 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 112019 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 112078 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 112079 ---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaa 112135 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 112136 tgagccggcgactcata 112152
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 823 bits (415), Expect = 0.0 Identities = 526/557 (94%), Gaps = 11/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 134927 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 134870 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 134869 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 134812 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134811 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 134752 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134751 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 134692 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || |||||| |||||||||||||||| ||||||||| Sbjct: 134691 agcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccagta 134632 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct: 134631 gccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatcccgt 134572 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134571 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 134512 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 134511 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 134452 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 134451 ---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgttgaagaa 134399 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 134398 tgagccggcgactcata 134382 Score = 823 bits (415), Expect = 0.0 Identities = 526/557 (94%), Gaps = 11/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 105355 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 105412 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 105413 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 105470 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105471 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 105530 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105531 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 105590 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || |||||| |||||||||||||||| ||||||||| Sbjct: 105591 agcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccagta 105650 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct: 105651 gccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatcccgt 105710 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105711 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 105770 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 105771 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 105830 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 105831 ---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgttgaagaa 105883 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 105884 tgagccggcgactcata 105900
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 819 bits (413), Expect = 0.0 Identities = 526/557 (94%), Gaps = 9/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 136537 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 136480 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 136479 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 136422 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136421 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 136362 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136361 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 136302 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 136301 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 136242 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 136241 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 136182 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136181 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 136122 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 136121 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 136062 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | || | ||||||||||||||||||||||||| Sbjct: 136061 ---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaa 136007 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 136006 tgagccggcgactcata 135990 Score = 819 bits (413), Expect = 0.0 Identities = 526/557 (94%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 105888 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 105945 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 105946 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 106003 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106004 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106063 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106064 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106123 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 106124 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 106183 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106184 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 106243 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106244 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 106303 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106304 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 106363 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | || | ||||||||||||||||||||||||| Sbjct: 106364 ---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaa 106418 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 106419 tgagccggcgactcata 106435
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 801 bits (404), Expect = 0.0 Identities = 524/557 (94%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 132721 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 132664 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 132663 cccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 132606 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132605 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 132546 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132545 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 132486 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 132485 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 132426 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132425 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 132366 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132365 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 132306 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 132305 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 132246 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 132245 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 132190 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 132189 tgagccggcgactcata 132173 Score = 801 bits (404), Expect = 0.0 Identities = 524/557 (94%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 104157 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 104214 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 104215 cccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 104272 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104273 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 104332 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104333 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 104392 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 104393 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 104452 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104453 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 104512 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104513 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 104572 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 104573 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 104632 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 104633 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 104688 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 104689 tgagccggcgactcata 104705
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 801 bits (404), Expect = 0.0 Identities = 524/557 (94%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 132944 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 132887 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 132886 cccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaag-agacaacc 132829 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132828 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 132769 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 132768 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 132709 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 132708 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 132649 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132648 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 132589 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132588 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 132529 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 132528 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 132469 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | || ||||||||||||||||||||||||| Sbjct: 132468 ---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaa 132413 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 132412 tgagccggcgactcata 132396 Score = 801 bits (404), Expect = 0.0 Identities = 524/557 (94%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 103820 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 103877 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 103878 cccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaag-agacaacc 103935 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103936 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 103995 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 103996 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 104055 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 104056 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 104115 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104116 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 104175 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104176 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 104235 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 104236 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 104295 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | || ||||||||||||||||||||||||| Sbjct: 104296 ---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaa 104351 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 104352 tgagccggcgactcata 104368
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 801 bits (404), Expect = 0.0 Identities = 524/557 (94%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 132714 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 132657 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 132656 cccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 132599 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132598 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 132539 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132538 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 132479 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 132478 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 132419 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132418 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 132359 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132358 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 132299 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 132298 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 132239 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 132238 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 132183 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 132182 tgagccggcgactcata 132166 Score = 801 bits (404), Expect = 0.0 Identities = 524/557 (94%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 104155 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 104212 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 104213 cccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 104270 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104271 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 104330 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104331 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 104390 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 104391 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 104450 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104451 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 104510 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104511 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 104570 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 104571 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 104630 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 104631 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 104686 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 104687 tgagccggcgactcata 104703
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 793 bits (400), Expect = 0.0 Identities = 523/557 (93%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 131613 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 131556 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 131555 cccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 131498 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131497 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 131438 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131437 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 131378 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 131377 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 131318 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131317 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 131258 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131257 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 131198 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 131197 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 131138 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 131137 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 131082 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 131081 tgagccggcgactcata 131065 Score = 793 bits (400), Expect = 0.0 Identities = 523/557 (93%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 103022 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 103079 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 103080 cccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 103137 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103138 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 103197 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103198 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 103257 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 103258 agcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagta 103317 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 103318 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 103377 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103378 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 103437 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 103438 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 103497 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 103498 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 103553 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 103554 tgagccggcgactcata 103570
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 793 bits (400), Expect = 0.0 Identities = 523/557 (93%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 133905 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 133848 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 133847 cccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaag-agacaacc 133790 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133789 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 133730 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 133729 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaa 133670 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 133669 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 133610 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133609 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 133550 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133549 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 133490 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 133489 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 133430 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | || ||||||||||||||||||||||||| Sbjct: 133429 ---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaa 133374 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 133373 tgagccggcgactcata 133357 Score = 793 bits (400), Expect = 0.0 Identities = 523/557 (93%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 104744 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 104801 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 104802 cccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaag-agacaacc 104859 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104860 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 104919 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 104920 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaa 104979 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 104980 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 105039 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105040 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 105099 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105100 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 105159 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 105160 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 105219 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | || ||||||||||||||||||||||||| Sbjct: 105220 ---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaa 105275 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 105276 tgagccggcgactcata 105292
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 789 bits (398), Expect = 0.0 Identities = 401/402 (99%) Strand = Plus / Plus Query: 156 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 216 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 276 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 335 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 336 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 396 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 456 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 402
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 785 bits (396), Expect = 0.0 Identities = 522/557 (93%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 140306 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 140249 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 140248 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 140191 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140190 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 140131 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140130 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 140071 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||||| || ||| |||||||||||||| | ||||||||| Sbjct: 140070 agcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtccagta 140011 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 140010 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 139951 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139950 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 139891 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 139890 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 139831 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | || ||||||||||||||||| | | | | ||||||||||||||||||||||||| Sbjct: 139830 ---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgttgaagaa 139775 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 139774 tgagccggcgactcata 139758 Score = 785 bits (396), Expect = 0.0 Identities = 522/557 (93%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 109754 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 109811 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 109812 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 109869 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109870 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 109929 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109930 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 109989 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||||| || ||| |||||||||||||| | ||||||||| Sbjct: 109990 agcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtccagta 110049 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110050 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 110109 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110110 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 110169 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 110170 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 110229 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | || ||||||||||||||||| | | | | ||||||||||||||||||||||||| Sbjct: 110230 ---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgttgaagaa 110285 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 110286 tgagccggcgactcata 110302
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 785 bits (396), Expect = 0.0 Identities = 522/557 (93%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 53 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 110 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 111 cccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaag-agacaacc 168 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaa 288 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 289 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 348 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 gccgagagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 408 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 468 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 469 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 528 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | || ||||||||||||||||||||||||| Sbjct: 529 ---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaa 584 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 585 tgagccggcgactcata 601
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 785 bits (396), Expect = 0.0 Identities = 522/557 (93%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 62 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 119 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 120 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || |||||| |||||||||||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggcgagagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 478 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 537 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 538 ---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaa 593 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 594 tgagccggcgactcata 610
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 785 bits (396), Expect = 0.0 Identities = 399/400 (99%) Strand = Plus / Plus Query: 158 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 218 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 278 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 337 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 338 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 398 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 458 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 400
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 785 bits (396), Expect = 0.0 Identities = 399/400 (99%) Strand = Plus / Plus Query: 158 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 218 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 278 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 337 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 338 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 398 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 458 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 400
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 783 bits (395), Expect = 0.0 Identities = 398/399 (99%) Strand = Plus / Plus Query: 159 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 219 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 279 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 338 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 339 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 399 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 459 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgactcata 557 ||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcata 399
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 783 bits (395), Expect = 0.0 Identities = 398/399 (99%) Strand = Plus / Plus Query: 159 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 219 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 279 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 338 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 339 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 399 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 459 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgactcata 557 ||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcata 402
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 779 bits (393), Expect = 0.0 Identities = 396/397 (99%) Strand = Plus / Plus Query: 161 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 221 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 281 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 340 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 341 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 401 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 461 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 521 accgcgtgcctgttgaagaatgagccggcgactcata 557 ||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcata 397
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 779 bits (393), Expect = 0.0 Identities = 423/429 (98%), Gaps = 3/429 (0%) Strand = Plus / Plus Query: 35 aaaataagcatagnatccggcgcattcccaaataggtcaaccttttaaactgcctgctga 94 ||||||||||||| |||||| | ||||||||||||||||||||||| ||||||||||||| Sbjct: 1 aaaataagcatag-atccggag-attcccaaataggtcaaccttttgaactgcctgctga 58 Query: 95 atccatgagcaggcaaggagacaacctggcgaactgaaacatcttagtagccagaggaaa 154 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 59 atccatgagcaggcaag-agacaacctggcgaactgaaacatcttagtagccagaggaaa 117 Query: 155 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 177 Query: 215 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 237 Query: 275 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 334 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 238 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 297 Query: 335 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 357 Query: 395 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 417 Query: 455 gggtagtga 463 ||||||||| Sbjct: 418 gggtagtga 426
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Minus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 136235 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 136178 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 136177 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 136120 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136119 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 136060 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 136059 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 136000 Query: 252 gctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | || ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 135999 gctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 135940 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135939 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 135880 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135879 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135820 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 135819 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 135763 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135762 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 135705 Query: 551 actcata 557 ||||||| Sbjct: 135704 actcata 135698 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 106395 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 106452 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 106453 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 106510 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106511 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 106570 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 106571 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 106630 Query: 252 gctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | || ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 106631 gctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 106690 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106691 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 106750 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106751 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106810 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 106811 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 106867 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106868 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106925 Query: 551 actcata 557 ||||||| Sbjct: 106926 actcata 106932
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Minus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 136873 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 136816 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 136815 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 136758 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136757 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 136698 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 136697 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 136638 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 136637 gctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 136578 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136577 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 136518 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136517 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 136458 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 136457 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 136401 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 136400 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 136343 Query: 551 actcata 557 ||||||| Sbjct: 136342 actcata 136336 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 106684 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 106741 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 106742 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 106799 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106800 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 106859 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 106860 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 106919 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 106920 gctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 106979 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106980 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 107039 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107040 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 107099 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 107100 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 107156 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 107157 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 107214 Query: 551 actcata 557 ||||||| Sbjct: 107215 actcata 107221
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 1589 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 1646 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 1647 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 1704 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1705 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 1764 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1765 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 1824 Query: 252 gctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | || ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 1825 gctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 1884 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1885 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 1944 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1945 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 2004 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 2005 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 2061 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 2062 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 2119 Query: 551 actcata 557 ||||||| Sbjct: 2120 actcata 2126
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Minus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 135481 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 135424 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 135423 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 135366 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135365 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 135306 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135305 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135246 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 135245 gctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 135186 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135185 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 135126 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135125 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135066 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 135065 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 135009 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135008 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 134951 Query: 551 actcata 557 ||||||| Sbjct: 134950 actcata 134944 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 105555 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 105612 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 105613 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 105670 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105671 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 105730 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105731 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 105790 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 105791 gctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 105850 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105851 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 105910 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105911 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 105970 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 105971 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 106027 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106028 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106085 Query: 551 actcata 557 ||||||| Sbjct: 106086 actcata 106092
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Minus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 135616 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 135559 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 135558 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 135501 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135500 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 135441 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135440 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135381 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 135380 gctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 135321 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135320 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 135261 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135260 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135201 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 135200 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 135144 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135143 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 135086 Query: 551 actcata 557 ||||||| Sbjct: 135085 actcata 135079 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 105727 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 105784 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 105785 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 105842 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105843 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 105902 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105903 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 105962 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 105963 gctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 106022 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106023 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 106082 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106083 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106142 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 106143 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 106199 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106200 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106257 Query: 551 actcata 557 ||||||| Sbjct: 106258 actcata 106264
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Minus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 135614 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 135557 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 135556 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 135499 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135498 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 135439 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135438 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135379 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 135378 gctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 135319 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135318 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 135259 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135258 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135199 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 135198 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 135142 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135141 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 135084 Query: 551 actcata 557 ||||||| Sbjct: 135083 actcata 135077 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 105724 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 105781 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 105782 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 105839 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105840 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 105899 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105900 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 105959 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 105960 gctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 106019 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106020 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 106079 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106080 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106139 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 106140 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 106196 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106197 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106254 Query: 551 actcata 557 ||||||| Sbjct: 106255 actcata 106261
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Minus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 135526 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 135469 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 135468 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 135411 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135410 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 135351 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135350 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135291 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 135290 gctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 135231 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135230 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 135171 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135170 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135111 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 135110 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 135054 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135053 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 134996 Query: 551 actcata 557 ||||||| Sbjct: 134995 actcata 134989 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 105602 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 105659 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 105660 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 105717 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105718 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 105777 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105778 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 105837 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 105838 gctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 105897 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105898 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 105957 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105958 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106017 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 106018 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 106074 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106075 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106132 Query: 551 actcata 557 ||||||| Sbjct: 106133 actcata 106139
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Minus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 136233 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 136176 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 136175 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 136118 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136117 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 136058 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 136057 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135998 Query: 252 gctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | || ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 135997 gctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 135938 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135937 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 135878 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135877 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135818 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 135817 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 135761 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135760 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 135703 Query: 551 actcata 557 ||||||| Sbjct: 135702 actcata 135696 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 106393 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 106450 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 106451 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 106508 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106509 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 106568 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 106569 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 106628 Query: 252 gctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | || ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 106629 gctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 106688 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106689 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 106748 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106749 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106808 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 106809 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 106865 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106866 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106923 Query: 551 actcata 557 ||||||| Sbjct: 106924 actcata 106930
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Minus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 135964 cgacgaaatgcttcggggagttgaaaataagcatag-atccgggg-attcccgaataggg 135907 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 135906 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 135849 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135848 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 135789 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135788 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135729 Query: 252 gctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | || ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 135728 gctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 135669 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135668 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 135609 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135608 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135549 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 135548 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 135492 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135491 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 135434 Query: 551 actcata 557 ||||||| Sbjct: 135433 actcata 135427 Score = 773 bits (390), Expect = 0.0 Identities = 514/547 (93%), Gaps = 10/547 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 106174 cgacgaaatgcttcggggagttgaaaataagcatag-atccgggg-attcccgaataggg 106231 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 106232 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 106289 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106290 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 106349 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 106350 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 106409 Query: 252 gctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | || ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 106410 gctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 106469 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106470 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 106529 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106530 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106589 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 106590 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 106646 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106647 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106704 Query: 551 actcata 557 ||||||| Sbjct: 106705 actcata 106711
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 769 bits (388), Expect = 0.0 Identities = 520/557 (93%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | |||||||||||||||||||||||| |||||||| ||| |||||| | ||| Sbjct: 106059 ggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtag-atccggag-att 106116 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 106117 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 106174 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106175 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106234 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106235 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106294 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||||| Sbjct: 106295 agcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagta 106354 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106355 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 106414 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106415 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 106474 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106475 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 106534 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||| ||||||||||||||| | | | | ||||||||||||||||||||||||| Sbjct: 106535 ---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaa 106590 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 106591 tgagccggcgactcata 106607 Score = 720 bits (363), Expect = 0.0 Identities = 519/560 (92%), Gaps = 11/560 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | |||||||||||||||||||||||| |||||||| ||| |||||| | ||| Sbjct: 135850 ggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtag-atccggag-att 135793 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 135792 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 135735 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135734 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135675 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc-aatac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135674 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaatac 135615 Query: 240 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 299 |||||| ||||||||||||||||| || ||||| |||||||||||||| | |||||||| Sbjct: 135614 aagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagt 135555 Query: 300 agccgaaagcatcactagcttatg-ctctgacccgagtagcatggggcacgtggaatccc 358 |||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct: 135554 agccgaaagcatcactagcttacgcccctgacccgagtagcatggggcacgtggaatccc 135495 Query: 359 gtgtgaatcag-caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 417 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135494 gtgtgaatcagccaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 135435 Query: 418 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 477 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135434 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135375 Query: 478 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 537 ||| | |||| ||||||||||||||| | | | | |||||||||||||||||||||| Sbjct: 135374 ccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaa 135319 Query: 538 gaatgagccggcgactcata 557 |||||||||||||||||||| Sbjct: 135318 gaatgagccggcgactcata 135299
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 769 bits (388), Expect = 0.0 Identities = 516/553 (93%), Gaps = 7/553 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| | ||| Sbjct: 55 ggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatag-atccggag-att 112 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||| ||| |||||||| |||||| |||||||| ||| ||||||||| |||||||| Sbjct: 113 cccgaatgggttaaccttttgaactgc-tgctgaattcataggcaggcaag-agacaacc 170 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 230 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 231 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 290 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 || |||||| ||||||||||||||||||||| |||||||| |||||| | ||||||||| Sbjct: 291 agtgttgtgttgctaggcgaagcggttgagtcccgcaccccagatggtgagagtccagta 350 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 351 gccgaaagcatcactagcttacgctctaacccgagtagcatggggcacgtggaatcccgt 410 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 470 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 471 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 530 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 531 ---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaa 587 Query: 541 tgagccggcgact 553 ||||||||||||| Sbjct: 588 tgagccggcgact 600
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 769 bits (388), Expect = 0.0 Identities = 520/557 (93%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | |||||||||||||||||||||||| |||||||| ||| |||||| | ||| Sbjct: 136126 ggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtag-atccggag-att 136069 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 136068 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 136011 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136010 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 135951 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135950 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 135891 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||||| Sbjct: 135890 agcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagta 135831 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135830 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 135771 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135770 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 135711 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 135710 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 135651 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||| ||||||||||||||| | | | | ||||||||||||||||||||||||| Sbjct: 135650 ---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaa 135595 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 135594 tgagccggcgactcata 135578 Score = 769 bits (388), Expect = 0.0 Identities = 520/557 (93%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | |||||||||||||||||||||||| |||||||| ||| |||||| | ||| Sbjct: 106281 ggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtag-atccggag-att 106338 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 106339 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 106396 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106397 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 106456 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106457 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 106516 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||||| Sbjct: 106517 agcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagta 106576 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106577 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 106636 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106637 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 106696 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106697 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 106756 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||| ||||||||||||||| | | | | ||||||||||||||||||||||||| Sbjct: 106757 ---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaa 106812 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 106813 tgagccggcgactcata 106829
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 765 bits (386), Expect = 0.0 Identities = 510/543 (93%), Gaps = 10/543 (1%) Strand = Plus / Minus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 135493 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 135436 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 135435 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 135378 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135377 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 135318 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135317 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 135258 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 135257 gctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 135198 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135197 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 135138 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135137 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135078 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 135077 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 135021 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135020 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 134963 Query: 551 act 553 ||| Sbjct: 134962 act 134960 Score = 765 bits (386), Expect = 0.0 Identities = 510/543 (93%), Gaps = 10/543 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 105569 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 105626 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 105627 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 105684 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105685 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 105744 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105745 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 105804 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 105805 gctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 105864 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105865 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 105924 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105925 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 105984 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 105985 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 106041 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106042 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106099 Query: 551 act 553 ||| Sbjct: 106100 act 106102
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 763 bits (385), Expect = 0.0 Identities = 521/558 (93%), Gaps = 9/558 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 54 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 111 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 112 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 169 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 taacgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 229 Query: 181 gc-ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 239 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 gcaggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 289 Query: 240 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 299 |||||| |||||||||||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 290 aagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggctagagtccagt 349 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 350 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 409 Query: 360 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 410 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagt 469 Query: 420 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 479 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 470 agtaccgtgagggaagggtgaaaagaacccccaccggggagtgaaatagaacatgaaacc 529 Query: 480 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 539 | | |||||||||||||||||||| | | | |||||||||||||||||||||||| Sbjct: 530 g---taagctcccaagcagtgggaggagcctg-gggctctgaccgcgtgcctgttgaaga 585 Query: 540 atgagccggcgactcata 557 |||||||||||||||||| Sbjct: 586 atgagccggcgactcata 603
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 761 bits (384), Expect = 0.0 Identities = 511/546 (93%), Gaps = 8/546 (1%) Strand = Plus / Minus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 ||||||||||||||||||||||||||||||||| || |||||| | |||||| ||||||| Sbjct: 131726 cgacgaaatgcttcggggagttgaaaataagcagag-atccggag-attcccgaataggt 131669 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 131668 caacctttcgaacttc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 131611 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131610 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 131551 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 131550 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 131491 Query: 252 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcat 311 |||||||||| | || |||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 131490 gctaggcgaatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcat 131431 Query: 312 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131430 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 131371 Query: 372 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131370 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 131311 Query: 432 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 491 ||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 131310 gaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctct 131254 Query: 492 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 551 |||||||||||||||| | || | |||||||||||||||||||||||||||||||||| Sbjct: 131253 caagcagtgggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcga 131195 Query: 552 ctcata 557 |||||| Sbjct: 131194 ctcata 131189 Score = 761 bits (384), Expect = 0.0 Identities = 511/546 (93%), Gaps = 8/546 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 ||||||||||||||||||||||||||||||||| || |||||| | |||||| ||||||| Sbjct: 101719 cgacgaaatgcttcggggagttgaaaataagcagag-atccggag-attcccgaataggt 101776 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 101777 caacctttcgaacttc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 101834 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101835 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 101894 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 101895 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 101954 Query: 252 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcat 311 |||||||||| | || |||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 101955 gctaggcgaatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcat 102014 Query: 312 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102015 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 102074 Query: 372 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102075 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 102134 Query: 432 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 491 ||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 102135 gaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctct 102191 Query: 492 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 551 |||||||||||||||| | || | |||||||||||||||||||||||||||||||||| Sbjct: 102192 caagcagtgggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcga 102250 Query: 552 ctcata 557 |||||| Sbjct: 102251 ctcata 102256
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 753 bits (380), Expect = 0.0 Identities = 478/505 (94%), Gaps = 7/505 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 130481 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 130424 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||| | ||||||||||||| ||||||||| |||||||| Sbjct: 130423 cccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaag-agacaacc 130366 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130365 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 130306 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 130305 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctataca 130246 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 130245 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 130186 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130185 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 130126 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 130125 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 130066 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 130065 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 130006 Query: 481 tgctgagctcccaagcagtgggagg 505 | |||||||||||||||||||| Sbjct: 130005 ---taagctcccaagcagtgggagg 129984 Score = 753 bits (380), Expect = 0.0 Identities = 478/505 (94%), Gaps = 7/505 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 101975 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 102032 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||| | ||||||||||||| ||||||||| |||||||| Sbjct: 102033 cccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaag-agacaacc 102090 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102091 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 102150 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 102151 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctataca 102210 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 102211 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 102270 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102271 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 102330 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 102331 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 102390 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 102391 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 102450 Query: 481 tgctgagctcccaagcagtgggagg 505 | |||||||||||||||||||| Sbjct: 102451 ---taagctcccaagcagtgggagg 102472 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 129928 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 102528
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 749 bits (378), Expect = 0.0 Identities = 519/558 (93%), Gaps = 10/558 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 139450 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 139393 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| |||| |||| |||||||| Sbjct: 139392 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaag-agacaacc 139335 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 139334 tggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagta 139275 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 139274 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 139215 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||||| Sbjct: 139214 agcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagta 139155 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139154 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 139095 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139094 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 139035 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 139034 gtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg 138975 Query: 481 tgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaaga 539 | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 138974 ---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaaga 138920 Query: 540 atgagccggcgactcata 557 |||||||||||||||||| Sbjct: 138919 atgagccggcgactcata 138902 Score = 749 bits (378), Expect = 0.0 Identities = 519/558 (93%), Gaps = 10/558 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 109647 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 109704 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| |||| |||| |||||||| Sbjct: 109705 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaag-agacaacc 109762 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 109763 tggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagta 109822 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 109823 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 109882 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||||| Sbjct: 109883 agcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagta 109942 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109943 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 110002 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110003 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 110062 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 110063 gtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg 110122 Query: 481 tgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaaga 539 | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 110123 ---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaaga 110177 Query: 540 atgagccggcgactcata 557 |||||||||||||||||| Sbjct: 110178 atgagccggcgactcata 110195
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 749 bits (378), Expect = 0.0 Identities = 512/547 (93%), Gaps = 11/547 (2%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 40 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 97 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 98 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 155 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 215 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 216 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 275 Query: 252 gctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | ||| ||| |||||| | ||||| ||||||||||||||||||||| Sbjct: 276 gctaggcgaagcagcctgaatgctgcaccc-atatggcgaaagtccagtagccgaaagca 334 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 394 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 454 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 455 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 511 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 512 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 569 Query: 551 actcata 557 ||||||| Sbjct: 570 actcata 576
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 745 bits (376), Expect = 0.0 Identities = 469/494 (94%), Gaps = 7/494 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| ||||||| Sbjct: 46317 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggt 46374 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 46375 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 46432 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46433 aacatcttactagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 46492 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46493 aatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 46552 Query: 252 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcat 311 ||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 46553 gctaggcgaagcggtggagtaccgcaccctagatggctagagtccagtagccgaaagcat 46612 Query: 312 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46613 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 46672 Query: 372 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46673 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 46732 Query: 432 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 491 ||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 46733 gaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctct 46789 Query: 492 caagcagtgggagg 505 |||||||||||||| Sbjct: 46790 caagcagtgggagg 46803 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 46859
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 745 bits (376), Expect = 0.0 Identities = 520/560 (92%), Gaps = 10/560 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 139659 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 139602 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 139601 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 139544 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139543 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 139484 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139483 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 139424 Query: 241 agcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagt 299 ||||| ||||||||||||||||| || || ||| ||||||||||||| | |||||||| Sbjct: 139423 agcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagt 139364 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 139363 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 139304 Query: 360 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 419 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139303 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcgaagt 139244 Query: 420 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 479 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 139243 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 139184 Query: 480 gtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaa 537 | | |||||||||||||||||||| || | | |||||||||||||||||||||| Sbjct: 139183 g---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgttgaa 139127 Query: 538 gaatgagccggcgactcata 557 |||||||||||||||||||| Sbjct: 139126 gaatgagccggcgactcata 139107 Score = 745 bits (376), Expect = 0.0 Identities = 520/560 (92%), Gaps = 10/560 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 109640 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 109697 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 109698 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 109755 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109756 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 109815 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109816 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 109875 Query: 241 agcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagt 299 ||||| ||||||||||||||||| || || ||| ||||||||||||| | |||||||| Sbjct: 109876 agcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagt 109935 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 109936 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 109995 Query: 360 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 419 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 109996 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcgaagt 110055 Query: 420 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 479 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 110056 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 110115 Query: 480 gtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaa 537 | | |||||||||||||||||||| || | | |||||||||||||||||||||| Sbjct: 110116 g---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgttgaa 110172 Query: 538 gaatgagccggcgactcata 557 |||||||||||||||||||| Sbjct: 110173 gaatgagccggcgactcata 110192
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 737 bits (372), Expect = 0.0 Identities = 476/505 (94%), Gaps = 7/505 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 62 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 119 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 120 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||||| Sbjct: 478 ctaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg 537 Query: 481 tgctgagctcccaagcagtgggagg 505 | |||||||||||||||||||| Sbjct: 538 ---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 737 bits (372), Expect = 0.0 Identities = 476/505 (94%), Gaps = 7/505 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 62 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 119 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 120 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 ||||||||||||| ||||||||||||||||| || ||||||||||||| |||||||| Sbjct: 478 ctaccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg 537 Query: 481 tgctgagctcccaagcagtgggagg 505 | |||||||||||||||||||| Sbjct: 538 ---taagctcccaagcagtgggagg 559 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||| ||||||||||||||||||| | ||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcata 622
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 731 bits (369), Expect = 0.0 Identities = 515/557 (92%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| ||||| | ||| Sbjct: 4285 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccgagg-att 4342 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| |||||||| || ||||||||||| |||||||| Sbjct: 4343 cccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaag-agacaacc 4400 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4401 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 4460 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4461 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaataca 4520 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||| ||||||||||||| | || || ||||||||||||| ||||||||||| Sbjct: 4521 agcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagta 4580 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4581 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 4640 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4641 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 4700 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 4701 gtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg 4760 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 4761 ---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaa 4815 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 4816 tgagccggcgactcata 4832
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 731 bits (369), Expect = 0.0 Identities = 515/557 (92%), Gaps = 9/557 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| ||||| | ||| Sbjct: 23640 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccgagg-att 23583 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| |||||||| || ||||||||||| |||||||| Sbjct: 23582 cccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaag-agacaacc 23525 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23524 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 23465 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23464 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaataca 23405 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||| ||||||||||||| | || || ||||||||||||| ||||||||||| Sbjct: 23404 agcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagta 23345 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23344 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 23285 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 23284 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 23225 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 23224 gtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg 23165 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 23164 ---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaa 23110 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 23109 tgagccggcgactcata 23093
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 731 bits (369), Expect = 0.0 Identities = 516/557 (92%), Gaps = 10/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| ||||| | ||| Sbjct: 4554 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccgagg-att 4611 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| |||||||| || ||||||||||| |||||||| Sbjct: 4612 cccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaag-agacaacc 4669 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4670 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 4729 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4730 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 4789 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || || || ||||||||||||| ||||||||||| Sbjct: 4790 agcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagta 4849 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 4850 gccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcccgt 4909 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4910 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 4969 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||| Sbjct: 4970 gtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg 5029 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | ||||||||| |||||||||| | | | ||||||||||||||||||||||||| Sbjct: 5030 ---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaa 5083 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 5084 tgagccggcgactcata 5100
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 731 bits (369), Expect = 0.0 Identities = 516/557 (92%), Gaps = 10/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| ||||| | ||| Sbjct: 4554 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccgagg-att 4611 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| |||||||| || ||||||||||| |||||||| Sbjct: 4612 cccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaag-agacaacc 4669 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4670 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 4729 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4730 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 4789 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||| || || || ||||||||||||| ||||||||||| Sbjct: 4790 agcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagta 4849 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 4850 gccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcccgt 4909 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4910 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 4969 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||| Sbjct: 4970 gtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg 5029 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | ||||||||| |||||||||| | | | ||||||||||||||||||||||||| Sbjct: 5030 ---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaa 5083 Query: 541 tgagccggcgactcata 557 ||||||||||||||||| Sbjct: 5084 tgagccggcgactcata 5100
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 729 bits (368), Expect = 0.0 Identities = 475/505 (94%), Gaps = 7/505 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 62 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 119 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 120 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 ||||||||||||| ||||||||||||||||| || ||||||||||||| |||||||| Sbjct: 478 ataccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg 537 Query: 481 tgctgagctcccaagcagtgggagg 505 | |||||||||||||||||||| Sbjct: 538 ---taagctcccaagcagtgggagg 559 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatga 543 |||||| ||||||||||||||| ||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga 608
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 729 bits (368), Expect = 0.0 Identities = 475/505 (94%), Gaps = 7/505 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 62 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 119 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 120 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||||| Sbjct: 478 ataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg 537 Query: 481 tgctgagctcccaagcagtgggagg 505 | |||||||||||||||||||| Sbjct: 538 ---taagctcccaagcagtgggagg 559 Score = 44.1 bits (22), Expect = 0.48 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||| |||||||||||| || |||||||| |||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagcc-gcgactcata 621
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 729 bits (368), Expect = 0.0 Identities = 475/505 (94%), Gaps = 7/505 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||| ||||||||||||| ||| |||||| | ||| Sbjct: 62 ggcgtagtaagcgacgaaatgcttcggggggttgaaaataagcgtag-atccggag-att 119 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 120 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 177 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 178 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 237 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 297 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| Sbjct: 298 agcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagta 357 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 417 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 477 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 478 ataccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 537 Query: 481 tgctgagctcccaagcagtgggagg 505 | |||||||||||||||||||| Sbjct: 538 ---taagctcccaagcagtgggagg 559 Score = 60.0 bits (30), Expect = 8e-06 Identities = 40/42 (95%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcata 621
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 726 bits (366), Expect = 0.0 Identities = 516/558 (92%), Gaps = 10/558 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| || |||||| | ||| Sbjct: 142825 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcag-atccggag-att 142768 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||| ||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 142767 cccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 142710 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142709 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 142650 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 142649 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcataca 142590 Query: 241 agcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtccagt 299 ||||| ||||||||||||||||| | || ||||| ||||||||||||| | |||||||| Sbjct: 142589 agcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtccagt 142530 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 142529 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 142470 Query: 360 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 419 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 142469 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagt 142410 Query: 420 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 479 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 142409 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 142350 Query: 480 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 539 | | ||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 142349 g---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 142295 Query: 540 atgagccggcgactcata 557 |||||||||||||||||| Sbjct: 142294 atgagccggcgactcata 142277 Score = 726 bits (366), Expect = 0.0 Identities = 516/558 (92%), Gaps = 10/558 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| || |||||| | ||| Sbjct: 110503 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcag-atccggag-att 110560 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||| ||||||||||| |||||| ||||||||||||| ||||||||| |||||||| Sbjct: 110561 cccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacc 110618 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110619 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 110678 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 110679 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcataca 110738 Query: 241 agcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtccagt 299 ||||| ||||||||||||||||| | || ||||| ||||||||||||| | |||||||| Sbjct: 110739 agcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtccagt 110798 Query: 300 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110799 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 110858 Query: 360 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 419 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 110859 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagt 110918 Query: 420 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 479 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 110919 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 110978 Query: 480 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 539 | | ||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 110979 g---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 111033 Query: 540 atgagccggcgactcata 557 |||||||||||||||||| Sbjct: 111034 atgagccggcgactcata 111051
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 726 bits (366), Expect = 0.0 Identities = 510/547 (93%), Gaps = 12/547 (2%) Strand = Plus / Plus Query: 14 acgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggtca 73 |||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| || Sbjct: 1833 acgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaatagggca 1890 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaa 133 |||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 1891 acctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactgaac 1948 Query: 134 catcttagtagccagaggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaa 192 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1949 catcttagtagccagaggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaa 2008 Query: 193 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt-gtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2009 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcggccgtgct 2068 Query: 252 gctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | || ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2069 gctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 2128 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2129 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 2188 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2189 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 2248 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 2249 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 2305 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 2306 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 2363 Query: 551 actcata 557 ||||||| Sbjct: 2364 actcata 2370
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 722 bits (364), Expect = 0.0 Identities = 505/545 (92%), Gaps = 9/545 (1%) Strand = Plus / Plus Query: 11 gcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaatagg 70 ||||||||||||||||||||||||||||| ||||||| |||||| | |||||| |||||| Sbjct: 86326 gcgacgaaatgcttcggggagttgaaaatgagcatag-atccggag-attcccgaatagg 86383 Query: 71 tcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactg 130 | |||| ||| |||||| ||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 86384 ttaacccttttaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactg 86441 Query: 131 aaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcg 190 ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 86442 aaacatcttagtagccagaggaatagaaagcaaaagcgattcccgtagtagtggcgagcg 86501 Query: 191 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc--aatacaagcgttgt 248 |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| Sbjct: 86502 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcccaatataagctctgt 86561 Query: 249 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 308 ||||||||||||||||||||||| | ||||||||||||| | ||||||||||||||||| Sbjct: 86562 gctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaag 86621 Query: 309 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 368 ||||| | ||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 86622 catcattggcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatca 86681 Query: 369 gcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86682 gcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtg 86741 Query: 429 agggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagc 488 |||||||||||||||||||||||| ||| ||||||||||||| |||||||| | ||| Sbjct: 86742 agggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagc 86798 Query: 489 tcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccgg 548 ||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 86799 tcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccgg 86858 Query: 549 cgact 553 ||||| Sbjct: 86859 cgact 86863
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 722 bits (364), Expect = 0.0 Identities = 505/545 (92%), Gaps = 9/545 (1%) Strand = Plus / Plus Query: 11 gcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaatagg 70 ||||||||||||||||||||||||||||| ||||||| |||||| | |||||| |||||| Sbjct: 88412 gcgacgaaatgcttcggggagttgaaaattagcatag-atccggag-attcccgaatagg 88469 Query: 71 tcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactg 130 | |||||||| ||||| ||||||||||||| ||||||||| ||||||||||| |||||| Sbjct: 88470 ttaacctttttcactgc-tgctgaatccatgggcaggcaag-agacaacctggtgaactg 88527 Query: 131 aaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcg 190 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 88528 aaacatcttagtagccagaggaatagaaagcaaaagcgattcccgtagtagcggcgagcg 88587 Query: 191 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca--atacaagcgttgt 248 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct: 88588 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcacaatataagctctgt 88647 Query: 249 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 308 ||||||||||||||||||||||| | ||||||||||||| | ||||||||||||||||| Sbjct: 88648 gctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaag 88707 Query: 309 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 368 ||||| | ||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 88708 catcattggcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatca 88767 Query: 369 gcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88768 gcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtg 88827 Query: 429 agggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagc 488 |||||||||||||||||||||||| ||| ||||||||||||| |||||||| | ||| Sbjct: 88828 agggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagc 88884 Query: 489 tcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccgg 548 ||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 88885 tcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccgg 88944 Query: 549 cgact 553 ||||| Sbjct: 88945 cgact 88949
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 720 bits (363), Expect = 0.0 Identities = 507/547 (92%), Gaps = 11/547 (2%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||| || |||||| | |||||| |||||| Sbjct: 561 cgacgaaatgcttcggggagttgaaaataagccgag-atccggag-attcccgaataggg 618 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 619 caacctttcgaacttc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 676 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 736 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 737 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 796 Query: 252 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcat 311 |||||||||| | || |||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 797 gctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcat 856 Query: 312 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 371 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 cactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 916 Query: 372 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta-ccgtgag 430 ||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 917 aggaccaccttgcaaggctaaatactcctgggtgaccgatagccaaatagtacccgtgag 976 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||||||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 977 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 1033 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 |||||||||||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 1034 tcaagcagtgggaggagacag---gctctgaccgcgtgcctgttgaagaatgagccggcg 1090 Query: 551 actcata 557 ||||||| Sbjct: 1091 actcata 1097
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 716 bits (361), Expect = 0.0 Identities = 504/544 (92%), Gaps = 10/544 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 103 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 160 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| ||||||||||||| |||| |||| |||||||| Sbjct: 161 cccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaag-agacaacc 218 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 219 tggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagta 278 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 279 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 338 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||||| Sbjct: 339 agcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagta 398 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 399 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 458 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 518 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 519 gtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg 578 Query: 481 tgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaaga 539 | ||||||||||||| |||||| | || | |||||||||||||||||||||||| Sbjct: 579 ---taagctcccaagcagngggaggagcccaggg--ctctgaccgcgtgcctgttgaaga 633 Query: 540 atga 543 |||| Sbjct: 634 atga 637
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 714 bits (360), Expect = 0.0 Identities = 470/501 (93%), Gaps = 8/501 (1%) Strand = Plus / Minus Query: 58 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagaca 117 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||| ||||| Sbjct: 507 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaag-agaca 450 Query: 118 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 390 Query: 178 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 330 Query: 238 acaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcc 296 |||||||| ||||||||||||||||| | || ||| |||||||||||||| ||||||| Sbjct: 329 acaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcc 270 Query: 297 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 210 Query: 357 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 416 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 209 ccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgatagcga 150 Query: 417 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 476 |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 149 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 90 Query: 477 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 536 |||| | |||||||||||||||||||| | || | ||||||||||||||||||||| Sbjct: 89 accg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttga 35 Query: 537 agaatgagccggcgactcata 557 ||||||||||||||||||||| Sbjct: 34 agaatgagccggcgactcata 14
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 710 bits (358), Expect = 0.0 Identities = 504/546 (92%), Gaps = 10/546 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||| || |||||| | |||||| |||||| Sbjct: 73 cgacgaaatgcttcggggagttgaaaataagccgag-atccggag-attcccgaataggg 130 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 131 caacctttcgaacttc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 188 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 248 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 249 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 308 Query: 252 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcat 311 |||||||||| | || |||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 309 gctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcat 368 Query: 312 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 371 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 cactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 428 Query: 372 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 431 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 429 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagg 488 Query: 432 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 491 ||| ||||||||||||||||| ||| ||||||||| ||| |||||||| | ||||| Sbjct: 489 gaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctct 545 Query: 492 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 551 |||||||||||||| || || |||||| ||||||||||||||| ||||||||||||| Sbjct: 546 caagcagtgggaggagacag---gctctgaacgcgtgcctgttgaaaaatgagccggcga 602 Query: 552 ctcata 557 |||||| Sbjct: 603 ctcata 608
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 710 bits (358), Expect = 0.0 Identities = 446/471 (94%), Gaps = 7/471 (1%) Strand = Plus / Plus Query: 88 ctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaacatcttagtagcca 147 |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaag-agacaacctggcgaactgaaacatcttagtagcca 75 Query: 148 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135 Query: 208 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 267 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 136 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 195 Query: 268 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 326 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 196 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 255 Query: 327 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 315 Query: 387 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 446 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 316 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 375 Query: 447 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 506 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 376 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 432 Query: 507 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 481
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 708 bits (357), Expect = 0.0 Identities = 518/561 (92%), Gaps = 12/561 (2%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 131817 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccgggg-att 131760 Query: 61 cccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaac 119 ||| | |||||||||||||| |||||| ||||||||||| | ||||||||| ||||||| Sbjct: 131759 cccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaag-agacaac 131702 Query: 120 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 179 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131701 ctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 131642 Query: 180 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131641 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 131582 Query: 240 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtcca 297 ||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||| Sbjct: 131581 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 131522 Query: 298 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 131521 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 131462 Query: 358 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131461 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 131402 Query: 418 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 477 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 131401 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 131342 Query: 478 ccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttga 536 ||| | |||||||||||||||||||| || | || ||||||||||||||||||||| Sbjct: 131341 ccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttga 131286 Query: 537 agaatgagccggcgactcata 557 ||||||||||||||||||||| Sbjct: 131285 agaatgagccggcgactcata 131265 Score = 708 bits (357), Expect = 0.0 Identities = 518/561 (92%), Gaps = 12/561 (2%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 103577 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccgggg-att 103634 Query: 61 cccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaac 119 ||| | |||||||||||||| |||||| ||||||||||| | ||||||||| ||||||| Sbjct: 103635 cccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaag-agacaac 103692 Query: 120 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 179 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103693 ctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 103752 Query: 180 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 103753 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 103812 Query: 240 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtcca 297 ||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||| Sbjct: 103813 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 103872 Query: 298 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 103873 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 103932 Query: 358 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 103933 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 103992 Query: 418 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 477 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 103993 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 104052 Query: 478 ccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttga 536 ||| | |||||||||||||||||||| || | || ||||||||||||||||||||| Sbjct: 104053 ccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttga 104108 Query: 537 agaatgagccggcgactcata 557 ||||||||||||||||||||| Sbjct: 104109 agaatgagccggcgactcata 104129
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 702 bits (354), Expect = 0.0 Identities = 505/547 (92%), Gaps = 10/547 (1%) Strand = Plus / Minus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 52621 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 52564 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 ||||||||| |||||| ||||||||||||| |||| |||| ||| ||||||||||||||| Sbjct: 52563 caaccttttgaactgc-tgctgaatccatgggcagacaag-agataacctggcgaactga 52506 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 52505 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcga 52446 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||| |||||||||||||||||||||||||| ||| || ||||| Sbjct: 52445 aatgggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgct 52386 Query: 252 gctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||| | | |||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 52385 gctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 52326 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 52325 tcattagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagc 52266 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 52265 aaggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgag 52206 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| |||| ||||||||||||| |||||||| | ||||| Sbjct: 52205 ggaagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctc 52149 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 52148 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 52091 Query: 551 actcata 557 ||||||| Sbjct: 52090 actcata 52084 Score = 702 bits (354), Expect = 0.0 Identities = 505/547 (92%), Gaps = 10/547 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 37207 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 37264 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 ||||||||| |||||| ||||||||||||| |||| |||| ||| ||||||||||||||| Sbjct: 37265 caaccttttgaactgc-tgctgaatccatgggcagacaag-agataacctggcgaactga 37322 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 37323 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcga 37382 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||| |||||||||||||||||||||||||| ||| || ||||| Sbjct: 37383 aatgggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgct 37442 Query: 252 gctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||| | | |||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 37443 gctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 37502 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 37503 tcattagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagc 37562 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 37563 aaggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgag 37622 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| |||| ||||||||||||| |||||||| | ||||| Sbjct: 37623 ggaagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctc 37679 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 37680 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 37737 Query: 551 actcata 557 ||||||| Sbjct: 37738 actcata 37744
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 702 bits (354), Expect = 0.0 Identities = 505/547 (92%), Gaps = 10/547 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 4135 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 4192 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 ||||||||| |||||| ||||||||||||| |||| |||| ||| ||||||||||||||| Sbjct: 4193 caaccttttgaactgc-tgctgaatccatgggcagacaag-agataacctggcgaactga 4250 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4251 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcga 4310 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||| |||||||||||||||||||||||||| ||| || ||||| Sbjct: 4311 aatgggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgct 4370 Query: 252 gctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||| | | |||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 4371 gctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 4430 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4431 tcattagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagc 4490 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 4491 aaggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgag 4550 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| |||| ||||||||||||| |||||||| | ||||| Sbjct: 4551 ggaagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctc 4607 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 4608 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 4665 Query: 551 actcata 557 ||||||| Sbjct: 4666 actcata 4672
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 700 bits (353), Expect = 0.0 Identities = 508/548 (92%), Gaps = 15/548 (2%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||| Sbjct: 165 cgacgaaatgcttcggggagttgaaaataagcatag-atccggag-attcccgaataggg 222 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 223 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 280 Query: 132 aacatcttagt-agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcg 190 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 aacatcttagtgagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcg 340 Query: 191 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgc 250 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 341 aaatgggagcagcctaaaccgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgc 399 Query: 251 tgctaggcgaag-cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagc 309 |||||||||||| || || ||| |||||||||||||| |||||||||||||||||||| Sbjct: 400 tgctaggcgaagacgcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagc 459 Query: 310 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcga 519 Query: 370 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 579 Query: 430 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagct 489 ||||| ||||||||||| ||||| ||| ||||||||||||| |||||||| | |||| Sbjct: 580 gggaagggtgaaaagaa-ccccatcggggagtgaaatagaacatgaaaccg---taagct 635 Query: 490 cccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 549 |||||||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 636 cccaagcagtgggaggcca----gggctctgaccgcgtgcctgttgaagaatgagccggc 691 Query: 550 gactcata 557 |||||||| Sbjct: 692 gactcata 699
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 688 bits (347), Expect = 0.0 Identities = 513/563 (91%), Gaps = 13/563 (2%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| |||||||||||||||||||| |||||| |||||||| |||||| | ||| Sbjct: 128392 ggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatag-atccggag-att 128335 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| |||||||| ||| ||||||||| |||||||| Sbjct: 128334 cccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaag-agacaacc 128277 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 128276 tggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtagta 128217 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc------ 234 |||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 128216 gcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgataca 128157 Query: 235 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 294 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||| Sbjct: 128156 aatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaagagt 128097 Query: 295 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 354 ||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||| Sbjct: 128096 ccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtggaa 128037 Query: 355 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128036 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 127977 Query: 415 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 474 |||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 127976 gaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaacatg 127917 Query: 475 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 534 |||||| | |||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 127916 aaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgcctgtt 127860 Query: 535 gaagaatgagccggcgactcata 557 || |||||||||||||||||||| Sbjct: 127859 gaggaatgagccggcgactcata 127837 Score = 688 bits (347), Expect = 0.0 Identities = 513/563 (91%), Gaps = 13/563 (2%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| |||||||||||||||||||| |||||| |||||||| |||||| | ||| Sbjct: 95055 ggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatag-atccggag-att 95112 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| |||||||| ||| ||||||||| |||||||| Sbjct: 95113 cccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaag-agacaacc 95170 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 95171 tggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtagta 95230 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc------ 234 |||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95231 gcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgataca 95290 Query: 235 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 294 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||| Sbjct: 95291 aatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaagagt 95350 Query: 295 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 354 ||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||| Sbjct: 95351 ccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtggaa 95410 Query: 355 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95411 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95470 Query: 415 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 474 |||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 95471 gaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaacatg 95530 Query: 475 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 534 |||||| | |||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 95531 aaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgcctgtt 95587 Query: 535 gaagaatgagccggcgactcata 557 || |||||||||||||||||||| Sbjct: 95588 gaggaatgagccggcgactcata 95610
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 684 bits (345), Expect = 0.0 Identities = 505/553 (91%), Gaps = 7/553 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| ||||||||||||| | |||||| | ||| Sbjct: 55 ggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcat-ggatccggag-att 112 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| |||||||| ||| |||| |||| |||||||| Sbjct: 113 cccgaataggttaaccttttgaactgc-tgctgaattcataggcagacaag-agacaacc 170 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 171 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 230 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | Sbjct: 231 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggggagcaaagta 290 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||| |||||||||||| ||||| | | ||||| ||||||| | ||||||||| Sbjct: 291 ggcgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggtgagagtccagta 350 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 351 gccgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtggaatcccgt 410 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 411 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagta 470 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 471 gtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg 530 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 531 ---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaa 587 Query: 541 tgagccggcgact 553 ||||||||||||| Sbjct: 588 tgagccggcgact 600
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 682 bits (344), Expect = 0.0 Identities = 506/553 (91%), Gaps = 8/553 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| |||||||||| |||| |||||| | ||| Sbjct: 116155 ggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatag-atccggag-att 116098 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||| |||||||| Sbjct: 116097 cccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaag-agacaacc 116040 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 116039 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgtagta 115980 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | | | Sbjct: 115979 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaata 115921 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 || |||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||||| Sbjct: 115920 agtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccagta 115861 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 115860 accgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatcccgt 115801 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 115800 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagta 115741 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 115740 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 115681 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 115680 ---taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaa 115624 Query: 541 tgagccggcgact 553 ||||||||||||| Sbjct: 115623 tgagccggcgact 115611 Score = 682 bits (344), Expect = 0.0 Identities = 506/553 (91%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| |||||||||| |||| |||||| | ||| Sbjct: 85965 ggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatag-atccggag-att 86022 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||| |||||||| Sbjct: 86023 cccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaag-agacaacc 86080 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 86081 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgtagta 86140 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | | | Sbjct: 86141 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaata 86199 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 || |||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||||| Sbjct: 86200 agtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccagta 86259 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 86260 accgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatcccgt 86319 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86320 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagta 86379 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 86380 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 86439 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 86440 ---taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaa 86496 Query: 541 tgagccggcgact 553 ||||||||||||| Sbjct: 86497 tgagccggcgact 86509
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 676 bits (341), Expect = 0.0 Identities = 506/554 (91%), Gaps = 8/554 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| | ||| Sbjct: 2098 ggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatag-atccggag-att 2155 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| |||||||| ||| ||||||||| |||||||| Sbjct: 2156 cccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaag-agacaacc 2213 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2214 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 2273 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct: 2274 gcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaata 2333 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 || ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||| Sbjct: 2334 agtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 2393 Query: 301 gccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 ||||||||||| || | || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 2394 gccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccg 2453 Query: 360 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 419 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 2454 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagt 2513 Query: 420 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 479 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 2514 agtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 2573 Query: 480 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 539 | | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 2574 g---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaaga 2630 Query: 540 atgagccggcgact 553 |||||||||||||| Sbjct: 2631 atgagccggcgact 2644
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 676 bits (341), Expect = 0.0 Identities = 506/554 (91%), Gaps = 8/554 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| | ||| Sbjct: 118095 ggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatag-atccggag-att 118038 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| |||||||| ||| ||||||||| |||||||| Sbjct: 118037 cccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaag-agacaacc 117980 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 117979 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 117920 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct: 117919 gcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaata 117860 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 || ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||| Sbjct: 117859 agtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 117800 Query: 301 gccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 ||||||||||| || | || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 117799 gccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccg 117740 Query: 360 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 419 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 117739 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagt 117680 Query: 420 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 479 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 117679 agtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 117620 Query: 480 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 539 | | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 117619 g---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaaga 117563 Query: 540 atgagccggcgact 553 |||||||||||||| Sbjct: 117562 atgagccggcgact 117549 Score = 676 bits (341), Expect = 0.0 Identities = 506/554 (91%), Gaps = 8/554 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| | ||| Sbjct: 90007 ggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatag-atccggag-att 90064 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| |||||||| ||| ||||||||| |||||||| Sbjct: 90065 cccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaag-agacaacc 90122 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 90123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 90182 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct: 90183 gcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaata 90242 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 || ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||| Sbjct: 90243 agtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 90302 Query: 301 gccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccg 359 ||||||||||| || | || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 90303 gccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccg 90362 Query: 360 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 419 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 90363 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagt 90422 Query: 420 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 479 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 90423 agtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 90482 Query: 480 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 539 | | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 90483 g---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaaga 90539 Query: 540 atgagccggcgact 553 |||||||||||||| Sbjct: 90540 atgagccggcgact 90553
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 672 bits (339), Expect = 0.0 Identities = 352/355 (99%), Gaps = 1/355 (0%) Strand = Plus / Plus Query: 58 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagaca 117 ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 13 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agaca 71 Query: 118 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 131 Query: 178 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 191 Query: 238 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 251 Query: 298 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 252 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 311 Query: 358 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 366
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 670 bits (338), Expect = 0.0 Identities = 465/500 (93%), Gaps = 8/500 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||| || |||||| | |||||| |||||| Sbjct: 73 cgacgaaatgcttcggggagttgaaaataagccgag-atccggag-attcccgaataggg 130 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 131 caacctttcgaacttc-tgctgaatccatgggcaggcaag-agacaacctggcgaactga 188 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 248 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 249 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgct 308 Query: 252 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcat 311 |||||||||| | || |||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 309 gctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcat 368 Query: 312 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 371 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 cactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 428 Query: 372 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 488 Query: 432 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 491 ||| ||||||||||| ||||| ||| ||||||||| ||| |||||||| | ||||| Sbjct: 489 gaagggtgaaaagaa-ccccatcggggagtgaaataaaacatgaaaccg---taagctct 544 Query: 492 caagcagtgggaggggaaag 511 |||||||||||||| ||||| Sbjct: 545 caagcagtgggaggagaaag 564
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Minus Query: 173 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 233 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 353 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 408 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 468 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 527 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 528 gcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcata 75097 Score = 281 bits (142), Expect = 1e-72 Identities = 171/177 (96%), Gaps = 3/177 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 75658 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 75601 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 75600 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 75542 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75541 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 450 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860 Score = 58.0 bits (29), Expect = 3e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 103 gcaggcaaggagacaacctggcgaactgaaacatcttagta 143 ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaag-agacaacctagcgaactgaaacatcttagta 430342
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Plus Query: 173 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 233 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 353 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 408 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 468 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 527 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 528 gcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcata 382441 Score = 281 bits (142), Expect = 1e-72 Identities = 171/177 (96%), Gaps = 3/177 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 381880 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 381937 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 381938 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 381996 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381997 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 450 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 450 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867 Score = 58.0 bits (29), Expect = 3e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 103 gcaggcaaggagacaacctggcgaactgaaacatcttagta 143 ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaag-agacaacctagcgaactgaaacatcttagta 254081 Score = 58.0 bits (29), Expect = 3e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 103 gcaggcaaggagacaacctggcgaactgaaacatcttagta 143 ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaag-agacaacctagcgaactgaaacatcttagta 125389
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Minus Query: 173 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 233 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 353 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 408 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 468 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 527 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 528 gcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcata 113188 Score = 281 bits (142), Expect = 1e-72 Identities = 171/177 (96%), Gaps = 3/177 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 113749 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 113692 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 113691 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 113633 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113632 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 450 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494 Score = 58.0 bits (29), Expect = 3e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 103 gcaggcaaggagacaacctggcgaactgaaacatcttagta 143 ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaag-agacaacctagcgaactgaaacatcttagta 323029
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Minus Query: 173 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 233 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 353 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 408 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 468 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 527 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 528 gcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcata 367870 Score = 668 bits (337), Expect = 0.0 Identities = 376/390 (96%), Gaps = 13/390 (3%) Strand = Plus / Minus Query: 173 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 233 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 353 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 408 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 468 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 527 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 528 gcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcata 184475 Score = 281 bits (142), Expect = 1e-72 Identities = 171/177 (96%), Gaps = 3/177 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 368431 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 368374 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 368373 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 368315 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368314 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 281 bits (142), Expect = 1e-72 Identities = 171/177 (96%), Gaps = 3/177 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 185036 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 184979 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 184978 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 184920 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184919 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 450 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329 Score = 58.0 bits (29), Expect = 3e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 103 gcaggcaaggagacaacctggcgaactgaaacatcttagta 143 ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaag-agacaacctagcgaactgaaacatcttagta 295858
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 666 bits (336), Expect = 0.0 Identities = 503/553 (90%), Gaps = 7/553 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| | ||| Sbjct: 3944 ggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatag-atccggag-att 4001 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| |||||||| || || | ||||| ||||||| Sbjct: 4002 cccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaag-agacaact 4059 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 4060 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 4119 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 4120 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 4179 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||| Sbjct: 4180 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 4239 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 4240 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 4299 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4300 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 4359 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 4360 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg 4419 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||| Sbjct: 4420 ---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaa 4476 Query: 541 tgagccggcgact 553 ||||||||||||| Sbjct: 4477 tgagccggcgact 4489
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 666 bits (336), Expect = 0.0 Identities = 506/557 (90%), Gaps = 11/557 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| |||||||||| || | |||||| | ||| Sbjct: 55 ggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtat-ggatccggag-att 112 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| ||||||||||||||| |||||||| ||| || |||||| |||||||| Sbjct: 113 cccgaataggttaaccttttaaactgc-tgctgaattcataggcgggcaag-agacaacc 170 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 171 cggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattctcgtagta 230 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||| Sbjct: 231 gcggcgagcgaaatgggagcggcctaaaccgtgaaaacggggttgtgggggagctataca 290 Query: 241 a----gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 296 | || ||| ||||||||||||||| ||||||| | |||||| |||||| | ||||| Sbjct: 291 aataagcattgcgctgctaggcgaagcagttgagtcctgcaccccagatggtgagagtcc 350 Query: 297 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 356 |||| |||||||||| || | |||||||||| |||||||||||||||||||||||||||| Sbjct: 351 agtaaccgaaagcataacaatcttatgctctaacccgagtagcatggggcacgtggaatc 410 Query: 357 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 470 Query: 417 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 476 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 471 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 530 Query: 477 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 536 |||| | |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 531 accg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttga 587 Query: 537 agaatgagccggcgact 553 ||||||||||||||||| Sbjct: 588 agaatgagccggcgact 604
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 666 bits (336), Expect = 0.0 Identities = 503/553 (90%), Gaps = 7/553 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| |||||||||| |||| |||||| | ||| Sbjct: 38 ggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatag-atccggag-att 95 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| ||||||||||||||| |||||||||||| || |||||| |||||||| Sbjct: 96 cccgaataggttaaccttttaaactgc-tgctgaatccataggcgggcaag-agacaacc 153 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| Sbjct: 154 tggcgaactgaaacatcttagtagccggaggaagagaaagcaaaagcgattctcgtagta 213 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | | | Sbjct: 214 gcggcgagcgaaacgggagcagcctaaaccgtgaaaacggggttgtgggggagctaaaga 273 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||| |||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||| Sbjct: 274 agcattgtattgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 333 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||| || ||||| ||||| ||||||||| |||||||||||||||||||||| Sbjct: 334 accgaaagcattacaagcttgggctctaacccgagtaacatggggcacgtggaatcccgt 393 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 454 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 513 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||| ||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 514 ---taagcttccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaa 570 Query: 541 tgagccggcgact 553 ||||||||||||| Sbjct: 571 tgagccggcgact 583
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 666 bits (336), Expect = 0.0 Identities = 503/553 (90%), Gaps = 7/553 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| | ||| Sbjct: 54 ggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatag-atccggag-att 111 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| |||||||| || || | ||||| ||||||| Sbjct: 112 cccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaag-agacaact 169 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 170 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 229 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 230 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 289 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||| Sbjct: 290 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 349 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 350 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 409 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 469 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 470 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg 529 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||| Sbjct: 530 ---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaa 586 Query: 541 tgagccggcgact 553 ||||||||||||| Sbjct: 587 tgagccggcgact 599
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 666 bits (336), Expect = 0.0 Identities = 503/553 (90%), Gaps = 7/553 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| | ||| Sbjct: 151191 ggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatag-atccggag-att 151134 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| |||||||| || || | ||||| ||||||| Sbjct: 151133 cccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaag-agacaact 151076 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 151075 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 151016 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 151015 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 150956 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||| Sbjct: 150955 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 150896 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 150895 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 150836 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150835 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 150776 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 150775 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg 150716 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||| Sbjct: 150715 ---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaa 150659 Query: 541 tgagccggcgact 553 ||||||||||||| Sbjct: 150658 tgagccggcgact 150646 Score = 666 bits (336), Expect = 0.0 Identities = 503/553 (90%), Gaps = 7/553 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| | ||| Sbjct: 117475 ggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatag-atccggag-att 117532 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| |||||||| || || | ||||| ||||||| Sbjct: 117533 cccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaag-agacaact 117590 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 117591 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 117650 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 117651 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 117710 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||| Sbjct: 117711 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 117770 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 117771 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 117830 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117831 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 117890 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 117891 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg 117950 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||| Sbjct: 117951 ---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaa 118007 Query: 541 tgagccggcgact 553 ||||||||||||| Sbjct: 118008 tgagccggcgact 118020
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 666 bits (336), Expect = 0.0 Identities = 503/553 (90%), Gaps = 7/553 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| | ||| Sbjct: 54 ggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatag-atccggag-att 111 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||||| |||||||| || || | ||||| ||||||| Sbjct: 112 cccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaag-agacaact 169 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 170 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 229 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 230 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 289 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||| Sbjct: 290 agcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagta 349 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 |||||||||| |||| |||| || | |||||||||||||||||||||||||||||||| Sbjct: 350 gccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgt 409 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 469 Query: 421 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 470 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg 529 Query: 481 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 540 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||| Sbjct: 530 ---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaa 586 Query: 541 tgagccggcgact 553 ||||||||||||| Sbjct: 587 tgagccggcgact 599
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 654 bits (330), Expect = 0.0 Identities = 503/554 (90%), Gaps = 8/554 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| ||||||| ||||| | |||||| | ||| Sbjct: 146505 ggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcat-ggatccggag-att 146448 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||| | |||||||| ||| |||||| || |||||||| Sbjct: 146447 cccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgag-agacaacc 146390 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 146389 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 146330 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 146329 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 146270 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||| |||||||||||||||| ||||||| | | ||||||||||| | ||||||||| Sbjct: 146269 agcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtccagta 146210 Query: 301 gccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatcccg 359 ||||||||||||||| || |||||||| ||||||||||||||||||||| |||||||| Sbjct: 146209 gccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcccg 146150 Query: 360 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 419 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 146149 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaaagt 146090 Query: 420 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 479 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 146089 agtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaacc 146030 Query: 480 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 539 | | ||||||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct: 146029 g---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaaga 145973 Query: 540 atgagccggcgact 553 |||||||||||||| Sbjct: 145972 atgagccggcgact 145959 Score = 654 bits (330), Expect = 0.0 Identities = 503/554 (90%), Gaps = 8/554 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| ||||||| ||||| | |||||| | ||| Sbjct: 111957 ggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcat-ggatccggag-att 112014 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||| |||||||| |||| | |||||||| ||| |||||| || |||||||| Sbjct: 112015 cccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgag-agacaacc 112072 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 112073 tggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagta 112132 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 112133 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatata 112192 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||| |||||||||||||||| ||||||| | | ||||||||||| | ||||||||| Sbjct: 112193 agcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtccagta 112252 Query: 301 gccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatcccg 359 ||||||||||||||| || |||||||| ||||||||||||||||||||| |||||||| Sbjct: 112253 gccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcccg 112312 Query: 360 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 419 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 112313 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaaagt 112372 Query: 420 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 479 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 112373 agtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaacc 112432 Query: 480 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 539 | | ||||||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct: 112433 g---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaaga 112489 Query: 540 atgagccggcgact 553 |||||||||||||| Sbjct: 112490 atgagccggcgact 112503
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 652 bits (329), Expect = 0.0 Identities = 426/451 (94%), Gaps = 7/451 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 51 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 108 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 109 cccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacc 166 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 226 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 286 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| |||||||||||||||||||| || | | |||||||||||||| | ||||||||| Sbjct: 287 agcgtcgtgctgctaggcgaagcggtggaatactgcaccctagatggcgatagtccagta 346 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 347 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 406 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 ||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||| Sbjct: 407 gtgaatcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgatagtgaagta 464 Query: 421 gtaccgtgagggaaaggtgaaaagaaccccc 451 |||||||||||||| |||| ||||||||||| Sbjct: 465 gtaccgtgagggaagggtg-aaagaaccccc 494
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 646 bits (326), Expect = 0.0 Identities = 416/441 (94%), Gaps = 4/441 (0%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 31 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 88 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| ||||||| ||| ||||||||| ||||||||| |||||||| Sbjct: 89 cccgaataggtcaacctttcaaactgc-tgccgaatccatgggcaggcaag-agacaacc 146 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 147 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 206 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 266 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 ||||| ||||||||||||||||||| || ||||||||||||||| ||||||||| Sbjct: 267 agcgtcgtgctgctaggcgaagcggccgaacaccgcaccctagatggtgggagtccagta 326 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 327 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 386 Query: 361 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 446 Query: 421 gtaccgtgagggaaaggtgaa 441 |||||||||||||| |||||| Sbjct: 447 gtaccgtgagggaagggtgaa 467
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 636 bits (321), Expect = e-179 Identities = 403/427 (94%), Gaps = 5/427 (1%) Strand = Plus / Minus Query: 132 aacatcttagtagccagaggaaaagaaag-caaaagcgattcccgtagtagcggcgagcg 190 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 564 aacatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcg 505 Query: 191 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgc 250 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 504 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgc 445 Query: 251 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||| Sbjct: 444 tgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagca 385 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 325 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 265 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 264 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 208 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 207 ccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcg 149 Query: 551 actcata 557 ||||||| Sbjct: 148 actcata 142 Score = 75.8 bits (38), Expect = 1e-10 Identities = 66/73 (90%), Gaps = 2/73 (2%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 679 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccggag-att 622 Query: 61 cccaaataggtca 73 ||| ||||||||| Sbjct: 621 cccgaataggtca 609
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 613 bits (309), Expect = e-172 Identities = 347/356 (97%), Gaps = 3/356 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||| ||||||||| |||||| | ||| Sbjct: 123416 ggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatag-atccggag-att 123359 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 123358 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 123300 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123299 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 123240 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123239 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 123180 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123179 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 123120 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 356 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123119 gccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 408 bits (206), Expect = e-111 Identities = 209/210 (99%) Strand = Plus / Minus Query: 348 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 408 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 468 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 528 gcctgttgaagaatgagccggcgactcata 557 ||||||||||||||||||||| |||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcata 122611
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 613 bits (309), Expect = e-172 Identities = 347/356 (97%), Gaps = 3/356 (0%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||| ||||||||| |||||| | ||| Sbjct: 12825957 ggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatag-atccggag-att 12825900 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 12825899 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 12825841 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825840 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 12825781 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825780 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 12825721 Query: 241 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825720 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 12825661 Query: 301 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 356 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825660 gccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 408 bits (206), Expect = e-111 Identities = 209/210 (99%) Strand = Plus / Minus Query: 348 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 408 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 468 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 528 gcctgttgaagaatgagccggcgactcata 557 ||||||||||||||||||||| |||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcata 12825152 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 293 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 352 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 583 bits (294), Expect = e-163 Identities = 491/547 (89%), Gaps = 11/547 (2%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||||||||||| ||||| | |||||| ||| || Sbjct: 65 cgacgaaatgcttcggggagttgaaaataagcatag-atccgtag-attcccgaatgggg 122 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 ||||||| | |||| ||||| |||||||| ||||| || |||||||||||||||||||| Sbjct: 123 taacctttcacactg-ctgctcaatccatgggcagg-aaagagacaacctggcgaactga 180 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 181 aacatcttagtagccagaggaaaataaagcaaaagcgattcccatagtagcggcgagcga 240 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 ||||||| |||||||||||| |||||||||||||||||||||||||| |||||| ||||| Sbjct: 241 aatgggatcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgct 300 Query: 252 gctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | || | || |||||||||||||| |||||||||||| | |||||| Sbjct: 301 gctaggcgaagcagcttaaatgatgcaccctagatggcgaaagtccagtagtcaaaagca 360 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 |||||| || |||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 361 tcactacgttgcgctctgacccgagtagcatgggacacgtgtaatcccgtgtgaatcagc 420 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| Sbjct: 421 aaggaccaccttgcaaggctaaatactcctgggtaaccaatagtaaagtagtaccgtgag 480 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||| ||||||||||| ||||| |||| ||||||||||||| |||||||| | |||| Sbjct: 481 ggaagggtgaaaagaa-ccccattggggagtgaaatagaacatgaaaccg---taagcta 536 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 537 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 594 Query: 551 actcata 557 ||||||| Sbjct: 595 actcata 601
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 557 bits (281), Expect = e-155 Identities = 322/333 (96%), Gaps = 2/333 (0%) Strand = Plus / Minus Query: 73 aaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaa 132 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggca-ggagacaacctggcgaactgaa 278 Query: 133 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 218 Query: 193 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctg 252 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 217 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctg 158 Query: 253 ctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatc 312 ||||||||||| || || ||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 157 ctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatc 98 Query: 313 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 372 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 actagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 38 Query: 373 ggaccaccttgcaaggctaaatactcctgggtg 405 ||||||||||||||||||||||||||||||||| Sbjct: 37 ggaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 529 bits (267), Expect = e-147 Identities = 270/271 (99%) Strand = Plus / Plus Query: 287 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 346 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 347 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 407 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 467 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 527 tgcctgttgaagaatgagccggcgactcata 557 ||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcata 271
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 454 bits (229), Expect = e-124 Identities = 345/375 (92%), Gaps = 8/375 (2%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 2653 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccgggg-att 2710 Query: 61 cccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaac 119 ||| | |||||||||||||| |||||| ||||||||||| | ||||||||| ||||||| Sbjct: 2711 cccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaag-agacaac 2768 Query: 120 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 179 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2769 ttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 2828 Query: 180 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2829 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 2888 Query: 240 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtcca 297 ||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||| Sbjct: 2889 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 2948 Query: 298 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 357 |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 2949 gtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcc 3007 Query: 358 cgtgtgaatcagcaa 372 ||||||||||||||| Sbjct: 3008 cgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 454 bits (229), Expect = e-124 Identities = 345/375 (92%), Gaps = 8/375 (2%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||| ||| |||||| | ||| Sbjct: 908 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtag-atccgggg-att 965 Query: 61 cccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaac 119 ||| | |||||||||||||| |||||| ||||||||||| | ||||||||| ||||||| Sbjct: 966 cccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaag-agacaac 1023 Query: 120 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 179 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 ttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 1083 Query: 180 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1084 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 1143 Query: 240 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtcca 297 ||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||| Sbjct: 1144 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 1203 Query: 298 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 357 |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 1204 gtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcc 1262 Query: 358 cgtgtgaatcagcaa 372 ||||||||||||||| Sbjct: 1263 cgtgtgaatcagcaa 1277
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 444 bits (224), Expect = e-121 Identities = 466/542 (85%), Gaps = 6/542 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||| ||||||| | |||| |||||| | |||||| ||||||| Sbjct: 143984 cgacgaaatgcttcggggagccgaaaataggtatag-atccggag-attcccgaataggt 144041 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||| |||||||||||||||| || ||||| |||| |||||||| |||||||||| Sbjct: 144042 taaccttccaaactgcctgctgaattcagaagcagacaag-agacaacccggcgaactga 144100 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 ||||||||||||||| ||||| | |||||||||||||||||| ||||| ||||||| || Sbjct: 144101 aacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtga 144160 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 || |||| ||||||||||||||| ||||||||||||||||| || || | || | Sbjct: 144161 aacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatgagggcttcgtttt 144220 Query: 252 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcat 311 ||||||||||| ||||||||| |||||| |||||| | ||||||||||||| ||| | Sbjct: 144221 actaggcgaagcagttgagtgctgcaccccagatggtgatagtccagtagccggaagtac 144280 Query: 312 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 371 |||||| | |||| |||| |||||||||||||||| |||||||||||||||||| Sbjct: 144281 agctagctcacgctccaacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcg 144340 Query: 372 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 431 |||||||||||| ||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 144341 aggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagg 144400 Query: 432 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 491 |||||||||||||||||||| ||| ||||||||||||| |||||||| ||||||| Sbjct: 144401 gaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---cgagctcc 144457 Query: 492 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 551 |||||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||| Sbjct: 144458 caagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcga 144517 Query: 552 ct 553 || Sbjct: 144518 ct 144519 Score = 444 bits (224), Expect = e-121 Identities = 466/542 (85%), Gaps = 6/542 (1%) Strand = Plus / Minus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||| ||||||| | |||| |||||| | |||||| ||||||| Sbjct: 88867 cgacgaaatgcttcggggagccgaaaataggtatag-atccggag-attcccgaataggt 88810 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||| |||||||||||||||| || ||||| |||| |||||||| |||||||||| Sbjct: 88809 taaccttccaaactgcctgctgaattcagaagcagacaag-agacaacccggcgaactga 88751 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 ||||||||||||||| ||||| | |||||||||||||||||| ||||| ||||||| || Sbjct: 88750 aacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtga 88691 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 || |||| ||||||||||||||| ||||||||||||||||| || || | || | Sbjct: 88690 aacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatgagggcttcgtttt 88631 Query: 252 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcat 311 ||||||||||| ||||||||| |||||| |||||| | ||||||||||||| ||| | Sbjct: 88630 actaggcgaagcagttgagtgctgcaccccagatggtgatagtccagtagccggaagtac 88571 Query: 312 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 371 |||||| | |||| |||| |||||||||||||||| |||||||||||||||||| Sbjct: 88570 agctagctcacgctccaacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcg 88511 Query: 372 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 431 |||||||||||| ||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 88510 aggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagg 88451 Query: 432 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 491 |||||||||||||||||||| ||| ||||||||||||| |||||||| ||||||| Sbjct: 88450 gaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---cgagctcc 88394 Query: 492 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 551 |||||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||| Sbjct: 88393 caagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcga 88334 Query: 552 ct 553 || Sbjct: 88333 ct 88332
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 430 bits (217), Expect = e-117 Identities = 220/221 (99%) Strand = Plus / Plus Query: 337 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 397 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 457 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 516 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 517 tctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcata 221
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 418 bits (211), Expect = e-114 Identities = 389/446 (87%), Gaps = 8/446 (1%) Strand = Plus / Minus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 ||||| ||| ||||||| |||||||| | ||||| | |||| |||| |||||||||||| Sbjct: 139109 gagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgatt 139050 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggag 231 |||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 139049 cccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtgggag 138990 Query: 232 agcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 287 ||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| || Sbjct: 138989 agcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacgg 138931 Query: 288 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 347 || ||||| ||||||| ||||| ||| ||||| ||||||||||||||||||||||||| Sbjct: 138930 ttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggca 138871 Query: 348 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||| |||||||| |||||||||| | ||||||||||||| ||||||||| Sbjct: 138870 cgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtgac 138811 Query: 408 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 467 |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 138810 cgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaata 138751 Query: 468 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 527 |||| |||||||| | ||||||| |||||||||||| ||| ||||||||||||||| Sbjct: 138750 gaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgaccgcgt 138694 Query: 528 gcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||| Sbjct: 138693 gcctgttgaagaatgagccggcgact 138668 Score = 418 bits (211), Expect = e-114 Identities = 389/446 (87%), Gaps = 8/446 (1%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 ||||| ||| ||||||| |||||||| | ||||| | |||| |||| |||||||||||| Sbjct: 82768 gagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgatt 82827 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggag 231 |||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 82828 cccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtgggag 82887 Query: 232 agcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 287 ||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| || Sbjct: 82888 agcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacgg 82946 Query: 288 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 347 || ||||| ||||||| ||||| ||| ||||| ||||||||||||||||||||||||| Sbjct: 82947 ttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggca 83006 Query: 348 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 407 |||||||||||||| |||||||| |||||||||| | ||||||||||||| ||||||||| Sbjct: 83007 cgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtgac 83066 Query: 408 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 467 |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 83067 cgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaata 83126 Query: 468 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 527 |||| |||||||| | ||||||| |||||||||||| ||| ||||||||||||||| Sbjct: 83127 gaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgaccgcgt 83183 Query: 528 gcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||| Sbjct: 83184 gcctgttgaagaatgagccggcgact 83209
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 416 bits (210), Expect = e-113 Identities = 239/245 (97%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 52 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 109 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 110 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 168 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 288 Query: 241 agcgt 245 ||||| Sbjct: 289 agcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 416 bits (210), Expect = e-113 Identities = 239/245 (97%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 52 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 109 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 110 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaag-agacaacc 168 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 288 Query: 241 agcgt 245 ||||| Sbjct: 289 agcgt 293
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 408 bits (206), Expect = e-111 Identities = 307/340 (90%), Gaps = 3/340 (0%) Strand = Plus / Minus Query: 214 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 273 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 274 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 333 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 394 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 453 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 454 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 513 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 514 atctctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgact 5948 Score = 218 bits (110), Expect = 1e-53 Identities = 184/202 (91%), Gaps = 5/202 (2%) Strand = Plus / Minus Query: 11 gcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaatagg 70 |||||||||||||||||||||||| || | |||||| |||||| | |||||| |||||| Sbjct: 6511 gcgacgaaatgcttcggggagttgtaattc-gcatag-atccggag-attcccgaatagg 6455 Query: 71 tcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactg 130 | |||||||| |||||| ||||||||||||| ||||| |||| | |||||||| |||||| Sbjct: 6454 ttaaccttttgaactgc-tgctgaatccatgggcaggtaagggg-caacctggtgaactg 6397 Query: 131 aaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcg 190 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 6396 aaacatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcg 6337 Query: 191 aaatgggagcagcctaaaccgt 212 |||||||||||||||||||||| Sbjct: 6336 aaatgggagcagcctaaaccgt 6315
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 406 bits (205), Expect = e-110 Identities = 205/205 (100%) Strand = Plus / Plus Query: 353 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 413 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 473 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 533 ttgaagaatgagccggcgactcata 557 ||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcata 205
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 166 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 225 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 226 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 284 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 285 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 344 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 345 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 404 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 405 gaccgata 412 |||||||| Sbjct: 241 gaccgata 248
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 396 bits (200), Expect = e-107 Identities = 292/320 (91%), Gaps = 2/320 (0%) Strand = Plus / Minus Query: 68 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaa 127 |||||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||| || Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaag-agacaacctggcaaa 3638 Query: 128 ctgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcga 187 |||||| |||||||||||||||||||||||||||||||| ||||||||||||| || ||| Sbjct: 3637 ctgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacga 3578 Query: 188 gcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttg 247 | ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| | Sbjct: 3577 gtgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtag 3518 Query: 248 tgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaa 307 ||| ||||||| ||||||| ||||| |||||||||||||| | ||| ||||||||||| Sbjct: 3517 tgccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaa 3458 Query: 308 gcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatc 367 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3457 gcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatt 3398 Query: 368 agcaaggaccaccttgcaag 387 |||||||||||||||||||| Sbjct: 3397 agcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 396 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 455 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 456 ggtagtgaaatagaacgtgaaacc 479 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcata 3208 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 11 gcgacgaaatgcttcggggagttgaaaataagc 43 ||||||||||||||| | |||||| |||||||| Sbjct: 3738 gcgacgaaatgcttcagagagttgcaaataagc 3706
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 392 bits (198), Expect = e-106 Identities = 252/268 (94%), Gaps = 4/268 (1%) Strand = Plus / Plus Query: 290 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 349 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 350 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 410 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 469 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 470 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 529 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 530 ctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcata 266
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 391 bits (197), Expect = e-105 Identities = 295/321 (91%), Gaps = 5/321 (1%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggt 71 |||||||||||||||||||||||||||| ||||||| |||||| | |||||| |||||| Sbjct: 177096 cgacgaaatgcttcggggagttgaaaatcagcatag-atccggag-attcccgaataggg 177153 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactga 131 |||||||| |||||| ||||||||||||| ||||||||| ||| |||| |||||||||| Sbjct: 177154 caacctttcgaactgc-tgctgaatccatgggcaggcaag-agagaaccaggcgaactga 177211 Query: 132 aacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcga 191 || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 177212 aagatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgggcga 177271 Query: 192 aatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgct 251 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 177272 aatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgca 177331 Query: 252 gctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 |||||||||||| | || ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 177332 gctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagca 177391 Query: 311 tcactagcttatgctctgacc 331 ||||||||||| ||||||||| Sbjct: 177392 tcactagcttaggctctgacc 177412 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 177446 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagc 145 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagc 145 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 275 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 334 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 335 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 394 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 395 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 454 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 455 gggtagtgaaatagaacgtgaaaccgt 481 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 311 bits (157), Expect = 1e-81 Identities = 214/228 (93%), Gaps = 4/228 (1%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | ||||||||||||||||||||||||||||||||||||| ||||| | ||| Sbjct: 79716 ggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatag-atccgagg-att 79659 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||||||||||||||| |||||| |||||||| || ||||||||||| |||||||| Sbjct: 79658 cccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaag-agacaacc 79601 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79600 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 79541 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 228 |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79540 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 293 bits (148), Expect = 3e-76 Identities = 177/183 (96%), Gaps = 3/183 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 75820 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 75877 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 75878 cccaaataggtcaaccttttaaactgcctgcggaatccatgagcaggcaag-agacaacc 75936 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75937 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 75996 Query: 181 gcg 183 ||| Sbjct: 75997 gcg 75999 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 450 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 404 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 450 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ggcgaactgaaacatcttag 141 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 291 bits (147), Expect = 1e-75 Identities = 371/442 (83%), Gaps = 9/442 (2%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| | Sbjct: 162 aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaaaagttattcccat 221 Query: 177 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 236 ||||| ||| | |||| |||| ||||||||| || |||| ||||||| || ||||| Sbjct: 222 agtagtggcaaatgaaaagggaacagcctaaatcgctaaaatggggttgggg---agcaa 278 Query: 237 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 296 || ||| || || |||||| || || || |||| | | ||||||||||| | ||||| Sbjct: 279 taaaagtattttgttgctagacggagtagtggagttctgaaccctagatggtgagagtcc 338 Query: 297 agtagccgaaagcatcactagcttatgctctga-cccgagtagcatggggcacgtggaat 355 ||||| |||| |||| ||||||||||| | | ||||||||||||||| || |||||| Sbjct: 339 agtagtataaagtatcattagcttatgcttttaacccgagtagcatgggacatatggaat 398 Query: 356 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 415 |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| | Sbjct: 399 cccgtgtgaatcagcaaggaccaccttgaaaggctaaatactcttgggtgaccaatagtg 458 Query: 416 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 475 ||||||||||||||||||| ||||||||||||||||| |||| |||||| |||||| ||| Sbjct: 459 aagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaactagaacatga 518 Query: 476 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 535 || | | ||| ||||||||||||||| || || | |||||||| |||||| |||| Sbjct: 519 aaac---atatgctaccaagcagtgggaggagacaggg--ctctgaccacgtgcccgttg 573 Query: 536 aagaatgagccggcgactcata 557 ||||||||| |||||||||||| Sbjct: 574 aagaatgagtcggcgactcata 595
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 291 bits (147), Expect = 1e-75 Identities = 206/225 (91%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 388 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 389 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 448 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 449 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 508 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 509 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 599 Score = 200 bits (101), Expect = 3e-48 Identities = 187/212 (88%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| ||| || |||||| | |||||| | || Sbjct: 42 ggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattg-atccggag-atg 99 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| |||||| ||||| || |||||||||||||| || | ||||||| |||||||| Sbjct: 100 cccgaataggggaacctatttgactgcctgctgaattgatagggaggcaag-agacaacc 158 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 159 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 218 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgt 212 | |||||||||||||||| ||||||||||||| Sbjct: 219 gtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 291 bits (147), Expect = 1e-75 Identities = 206/225 (91%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 388 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 389 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 448 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 449 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 508 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 509 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 612 Score = 200 bits (101), Expect = 3e-48 Identities = 187/212 (88%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||| ||| || |||||| | |||||| | || Sbjct: 55 ggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattg-atccggag-atg 112 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| |||||| ||||| || |||||||||||||| || | ||||||| |||||||| Sbjct: 113 cccgaataggggaacctatttgactgcctgctgaattgatagggaggcaag-agacaacc 171 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 172 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 231 Query: 181 gcggcgagcgaaatgggagcagcctaaaccgt 212 | |||||||||||||||| ||||||||||||| Sbjct: 232 gtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 289 bits (146), Expect = 5e-75 Identities = 205/224 (91%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 509 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 510 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 716 Score = 190 bits (96), Expect = 3e-45 Identities = 185/211 (87%), Gaps = 3/211 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| |||||||||||||||||| || ||| || |||||| | |||||| | || Sbjct: 159 ggcgtagcaagcgacgaaatgcttcgggaagctgagaacaagcattg-atccggag-atg 216 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| |||||| ||||| || |||||||||||||| || | ||||||| |||||||| Sbjct: 217 cccgaataggggaacctatttgactgcctgctgaattgatagggaggcaag-agacaacc 275 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 276 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 335 Query: 181 gcggcgagcgaaatgggagcagcctaaaccg 211 | |||||||||||||||| |||||||||||| Sbjct: 336 gtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 283 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 341 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 342 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 401 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 402 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 461 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 462 gaaatagaacgtgaaaccgtgctgagctcc 491 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 283 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 341 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 342 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 401 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 402 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 461 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 462 gaaatagaacgtgaaaccgtgctgagctcc 491 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 283 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 341 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 342 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 401 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 402 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 461 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 462 gaaatagaacgtgaaaccgtgctgagctcc 491 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 484 tgagctcccaagcagtgggaggggaaagtgatc 516 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 283 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 341 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 342 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 401 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 402 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 461 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 462 gaaatagaacgtgaaaccgtgctgagctcc 491 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 484 tgagctcccaagcagtgggaggggaaagtgatc 516 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 285 bits (144), Expect = 8e-74 Identities = 227/253 (89%), Gaps = 5/253 (1%) Strand = Plus / Plus Query: 305 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 364 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 365 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 424 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 425 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 484 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 485 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 544 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 545 ccggcgactcata 557 ||||||||||||| Sbjct: 608 ccggcgactcata 620 Score = 131 bits (66), Expect = 3e-27 Identities = 143/168 (85%), Gaps = 3/168 (1%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| | Sbjct: 161 aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaaaagttattcccat 220 Query: 177 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 236 ||||| ||||||||||| |||| |||||||||||| |||| |||||| || |||||| Sbjct: 221 agtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggtt---ggggagcaa 277 Query: 237 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 284 || ||| ||||| |||||| |||||| || |||| | | |||||||| Sbjct: 278 taaaagtattgtgttgctagacgaagcagtggagttctgaaccctaga 325
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 276 bits (139), Expect = 7e-71 Identities = 204/225 (90%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 388 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 389 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 448 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 449 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 508 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 509 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 Score = 157 bits (79), Expect = 5e-35 Identities = 94/99 (94%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117 gagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 176 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 ||| ||||| |||||||||||||||| ||||||||||| Sbjct: 177 ccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 251 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 551 act 553 ||| Sbjct: 599 act 601 Score = 190 bits (96), Expect = 3e-45 Identities = 195/224 (87%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 11 gcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaatagg 70 ||||||||||||||||||||| || || |||||||| ||||| | | ||| |||||| Sbjct: 65 gcgacgaaatgcttcggggagctgcgaacaagcatag-atccgaag-acccccgaatagg 122 Query: 71 tcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactg 130 |||||| || ||| | |||||||||||| ||| | ||| ||| |||||||||||||| Sbjct: 123 gcaacctcttgtactacttgctgaatccataggcaagaaag-agataacctggcgaactg 181 Query: 131 aaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcg 190 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 182 aaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcg 241 Query: 191 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 234 ||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 242 aaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Minus Query: 251 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 551 act 553 ||| Sbjct: 124666 act 124664 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 251 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 310 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 311 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 370 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 371 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 430 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 490 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 491 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 550 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 551 act 553 ||| Sbjct: 95200 act 95202 Score = 190 bits (96), Expect = 3e-45 Identities = 195/224 (87%), Gaps = 3/224 (1%) Strand = Plus / Minus Query: 11 gcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaatagg 70 ||||||||||||||||||||| || || |||||||| ||||| | | ||| |||||| Sbjct: 125200 gcgacgaaatgcttcggggagctgcgaacaagcatag-atccgaag-acccccgaatagg 125143 Query: 71 tcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactg 130 |||||| || ||| | |||||||||||| ||| | ||| ||| |||||||||||||| Sbjct: 125142 gcaacctcttgtactacttgctgaatccataggcaagaaag-agataacctggcgaactg 125084 Query: 131 aaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcg 190 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 125083 aaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcg 125024 Query: 191 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 234 ||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125023 aaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 190 bits (96), Expect = 3e-45 Identities = 195/224 (87%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 11 gcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaatagg 70 ||||||||||||||||||||| || || |||||||| ||||| | | ||| |||||| Sbjct: 94666 gcgacgaaatgcttcggggagctgcgaacaagcatag-atccgaag-acccccgaatagg 94723 Query: 71 tcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactg 130 |||||| || ||| | |||||||||||| ||| | ||| ||| |||||||||||||| Sbjct: 94724 gcaacctcttgtactacttgctgaatccataggcaagaaag-agataacctggcgaactg 94782 Query: 131 aaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcg 190 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 94783 aaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcg 94842 Query: 191 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 234 ||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94843 aaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 509 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 510 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 598 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 gagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 209 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 ||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 210 cccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Minus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 509 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 510 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 115064 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 509 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 510 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 86924 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Minus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115513 gagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 115454 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 ||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115453 cccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86475 gagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 86534 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 ||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86535 cccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 250 bits (126), Expect = 4e-63 Identities = 132/134 (98%) Strand = Plus / Minus Query: 424 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 483 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 484 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 543 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 544 gccggcgactcata 557 |||||||||||||| Sbjct: 107930 gccggcgactcata 107917
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 244 bits (123), Expect = 3e-61 Identities = 201/224 (89%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 509 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 510 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgact 627 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||||| || Sbjct: 154 caacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcgatttcct 213 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaac 209 ||||||||||||||||| || | |||||||||| Sbjct: 214 gagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 244 bits (123), Expect = 3e-61 Identities = 201/224 (89%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 509 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 510 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgact 588 Score = 105 bits (53), Expect = 2e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 ||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 142 gagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcgatt 201 Query: 172 cccgtagtagcggcgagcgaa 192 || ||||||||||||||||| Sbjct: 202 tccttagtagcggcgagcgaa 222
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 258 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 317 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 318 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 377 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 378 accttgcaaggctaaatactcctgggtgaccga 410 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 277 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 336 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 337 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 396 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 397 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 456 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 457 gtagtgaaatagaacgtgaaa 477 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 123 bits (62), Expect = 7e-25 Identities = 179/210 (85%), Gaps = 6/210 (2%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaataagcatagnatccggcgcattcccaaataggtcaac 75 |||||||||||||||||| ||||||| ||||| |||||| | |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatag-atccggag-attcccgaataggtaaac 125 Query: 76 cttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaaca 135 |||| ||||||| |||| | |||||| |||| ||| ||| ||||||| |||||||| || Sbjct: 126 ctttaaaactgc-tgcttattccatg-gcagacaaa-aga-aacctggtgaactgaatca 181 Query: 136 tcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 195 ||||||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| | Sbjct: 182 tcttagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaag 241 Query: 196 ggagcagcctaaaccgtgaaaacggggttg 225 ||| |||||||||||| |||| ||||||| Sbjct: 242 ggaacagcctaaaccgctaaaatggggttg 271 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 ||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcata 607
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 232 bits (117), Expect = 1e-57 Identities = 206/235 (87%), Gaps = 3/235 (1%) Strand = Plus / Plus Query: 323 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 382 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 383 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 442 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 443 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 502 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 503 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 || ||| | |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcata 611 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 163 gagacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatt 222 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaa 208 || ||||||||||||||||||||||| |||||||| Sbjct: 223 tcctgagtagcggcgagcgaaatgggagaagcctaaa 259 Score = 46.1 bits (23), Expect = 0.12 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaa 38 ||||||| | ||||||||| |||||||||||| ||||| Sbjct: 55 ggcgtagtaagcgacgaaacgcttcggggagtcgaaaa 92
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 232 bits (117), Expect = 1e-57 Identities = 242/283 (85%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 275 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 334 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 335 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 394 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 395 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 454 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 455 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 514 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 515 tctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcata 4649 Score = 153 bits (77), Expect = 7e-34 Identities = 179/208 (86%), Gaps = 4/208 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | |||||||||||||||||||||| ||||| | |||||| |||||| | ||| Sbjct: 4088 ggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatag-atccggag-att 4145 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||| || |||| || |||||| ||||||||||| || | ||| ||| |||| Sbjct: 4146 cccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataag-agagaacc 4203 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 4204 tggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagta 4263 Query: 181 gcggcgagcgaaatgggagcagcctaaa 208 ||||||||||||||||||| |||||||| Sbjct: 4264 gcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 232 bits (117), Expect = 1e-57 Identities = 242/283 (85%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 275 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 334 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 335 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 394 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 395 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 454 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 455 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 514 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 515 tctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcata 616 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 162 gagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgatt 221 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaa 208 ||| ||||||||||||||||||||||| |||||||| Sbjct: 222 ccctgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 56.0 bits (28), Expect = 1e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatag 47 ||||||| | |||||||||||||||||||||| ||||| | |||||| Sbjct: 55 ggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatag 101
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 232 bits (117), Expect = 1e-57 Identities = 242/283 (85%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 275 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 334 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 335 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 394 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 395 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 454 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 455 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 514 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 515 tctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcata 616 Score = 153 bits (77), Expect = 7e-34 Identities = 179/208 (86%), Gaps = 4/208 (1%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||| | |||||||||||||||||||||| ||||| | |||||| |||||| | ||| Sbjct: 55 ggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatag-atccggag-att 112 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 ||| ||| || |||| || |||||| ||||||||||| || | ||| ||| |||| Sbjct: 113 cccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataag-agagaacc 170 Query: 121 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 180 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 171 tggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagta 230 Query: 181 gcggcgagcgaaatgggagcagcctaaa 208 ||||||||||||||||||| |||||||| Sbjct: 231 gcggcgagcgaaatgggagaagcctaaa 258
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 509 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 510 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | | | |||||||||||||||||||||||||||||||||||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 |||||| | ||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 154 caacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgattccct 213 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 |||||||||||||| || |||| |||||||||||| Sbjct: 214 gagtagcggcgagcggaaagggaacagcctaaaccg 249
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 509 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 510 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | | | |||||||||||||||||||||||||||||||||||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgact 2384 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 |||||| | ||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1920 caacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgattccct 1979 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 |||||||||||||| || |||| |||||||||||| Sbjct: 1980 gagtagcggcgagcggaaagggaacagcctaaaccg 2015
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 230 bits (116), Expect = 4e-57 Identities = 202/230 (87%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 324 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 383 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 384 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 443 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 444 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 503 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 504 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 || || | || ||||||||||||||||||||||||||||||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgact 564 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 117 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 176 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 177 agtagcggcgagcgaaatgggagcagcctaaacc 210 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 228 bits (115), Expect = 2e-56 Identities = 198/224 (88%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 509 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 510 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 133 bits (67), Expect = 7e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| Sbjct: 163 gaactgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcgg 222 Query: 185 cgagcgaaatgggagcagcctaaaccg 211 ||||||||| |||| |||||||||||| Sbjct: 223 cgagcgaaacgggaccagcctaaaccg 249
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 472 gtgaaa 477 ||||| Sbjct: 503 atgaaa 508 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||| ||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 158/185 (85%), Gaps = 7/185 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggag 199 ||||| Sbjct: 242 gggag 246 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 472 gtgaaa 477 ||||| Sbjct: 503 atgaaa 508 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 105 bits (53), Expect = 2e-19 Identities = 165/193 (85%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| ||||||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggcgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 164/193 (84%), Gaps = 7/193 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggagcagcctaa 207 |||| || ||||| Sbjct: 242 gggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 216 bits (109), Expect = 6e-53 Identities = 199/226 (88%), Gaps = 6/226 (2%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 448 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 449 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 508 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 509 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 554 | | |||||||||||||||||||||||||||||||||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactc 575 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaac 209 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 212 bits (107), Expect = 9e-52 Identities = 196/225 (87%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 388 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 389 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 448 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 449 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 508 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 509 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | | |||| ||||||||||||||||||||||||||||||||||| Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgact 1005 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 563 gagacaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgatt 622 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 212 ||| |||||| ||||||||||| |||| ||||||||||||| Sbjct: 623 cccttagtagtggcgagcgaaacgggaacagcctaaaccgt 663 Score = 40.1 bits (20), Expect = 7.6 Identities = 25/27 (92%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcgg 27 ||||||| | ||||||||||||||||| Sbjct: 458 ggcgtagaaagcgacgaaatgcttcgg 484
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 212 bits (107), Expect = 9e-52 Identities = 196/224 (87%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 509 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 510 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgact 735 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 |||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||| Sbjct: 154 caacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcgattccct 213 Query: 176 tagtagcggcgagcgaaatggga 198 ||||||||||||||||||||||| Sbjct: 214 tagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 9e-52 Identities = 140/151 (92%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccg 480 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||| |||| || |||||||||||||| ||||||| ||||||||||||||||| |||||| Sbjct: 142 gagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaacgcgatt 201 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 ||| |||||||||||||||||| |||| ||||||||||| Sbjct: 202 cccatagtagcggcgagcgaaaagggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 292 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 351 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 352 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 411 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 412 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 471 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 472 gtgaaa 477 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 158/185 (85%), Gaps = 7/185 (3%) Strand = Plus / Plus Query: 16 gaaatgcttcggggagttgaaaa-taagcatagnatccggcgcattcccaaataggtcaa 74 |||||||||||||||||| |||| ||| ||||| |||||| | |||||| ||||||| || Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatag-atccggag-attcccgaataggtaaa 125 Query: 75 ccttttaaactgcctgctgaatccatgagcaggcaaggagacaacctggcgaactgaaac 134 ||||| ||||||| |||| | |||||| | || |||| ||| |||| || |||||||||| Sbjct: 126 cctttaaaactgc-tgcttattccatg-gaagacaag-aga-aacccggtgaactgaaac 181 Query: 135 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 194 ||||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 182 atcttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaa 241 Query: 195 gggag 199 ||||| Sbjct: 242 gggag 246 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 516 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||| |||| || |||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 143 gagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcgatt 202 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 ||| |||||||||||||||||| |||| ||||||||||| Sbjct: 203 cccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 129 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 188 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 189 cgaaatgggagcagcctaaacc 210 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 517 tctgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgact 621
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 388 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 389 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 448 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 449 cc 450 || Sbjct: 493 cc 494 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 151 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgcgatt 210 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaaccg 211 ||| ||||||||||||||||| |||| ||||||||||| Sbjct: 211 cccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 520 gaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgact 595 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 12 cgacgaaatgcttcggggagttg 34 ||||||||||||||||||||||| Sbjct: 66 cgacgaaatgcttcggggagttg 88
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 393 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 394 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 453 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 454 tgggtagtgaaatagaacgtgaaacc 479 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 133 bits (67), Expect = 7e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||| ||||| | ||||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 1930 gagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgatt 1989 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 230 ||| |||||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1990 cccttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048 Score = 48.1 bits (24), Expect = 0.031 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggag 31 ||||||| | ||||||||||||||||||||| Sbjct: 1822 ggcgtagtaagcgacgaaatgcttcggggag 1852
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 200 bits (101), Expect = 3e-48 Identities = 130/136 (95%), Gaps = 3/136 (2%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 19434052 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 19433995 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 19433994 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaa-gagacaacc 19433936 Query: 121 tggcgaactgaaacat 136 |||||||||||||||| Sbjct: 19433935 tggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 504 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 545 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 422 taccgtgagggaaaggtgaaaagaacc 448 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 200 bits (101), Expect = 3e-48 Identities = 130/136 (95%), Gaps = 3/136 (2%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 51579 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 51522 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 51521 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaa-gagacaacc 51463 Query: 121 tggcgaactgaaacat 136 |||||||||||||||| Sbjct: 51462 tggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 200 bits (101), Expect = 3e-48 Identities = 130/136 (95%), Gaps = 3/136 (2%) Strand = Plus / Minus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 119543 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 119486 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 119485 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaa-gagacaacc 119427 Query: 121 tggcgaactgaaacat 136 |||||||||||||||| Sbjct: 119426 tggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 200 bits (101), Expect = 3e-48 Identities = 130/136 (95%), Gaps = 3/136 (2%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 6079 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 6136 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 6137 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaa-gagacaacc 6195 Query: 121 tggcgaactgaaacat 136 |||||||||||||||| Sbjct: 6196 tggcgaactgaaacat 6211
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 129 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 188 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 189 cgaaatgggagcagcctaaacc 210 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgact 780
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 185 cgagcgaaatgggagcagcctaaac 209 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 129 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 188 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 189 cgaaatgggagcagcctaaacc 210 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgact 628
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 198 bits (100), Expect = 1e-47 Identities = 197/226 (87%), Gaps = 10/226 (4%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 507 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 508 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | | || | |||||||||||||||||||||||||||||||||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgact 653 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgact 151772 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgact 42431
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 185 cgagcgaaatgggagcagcctaaac 209 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgact 603
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgact 688
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 196 bits (99), Expect = 5e-47 Identities = 199/225 (88%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 448 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 449 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 508 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 509 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 659 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 ||||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 147 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccg 206 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 ||||||||||||||||| |||| |||||||||||| Sbjct: 207 gagtagcggcgagcgaaacgggaacagcctaaaccg 242
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 196 bits (99), Expect = 5e-47 Identities = 128/134 (95%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggagttgaaaataagcatagnatccggcgcatt 60 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 1599 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag-atccggag-att 1656 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagacaacc 120 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1657 cccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaa-gagacaacc 1715 Query: 121 tggcgaactgaaac 134 |||||||||||||| Sbjct: 1716 tggcgaactgaaac 1729
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 450 ccagtgggtagtgaaatagaacgtgaaacc 479 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 438 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 497 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 498 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 547 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 393 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 394 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 453 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 454 tgggtagtgaaatagaacgtgaaacc 479 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 153 bits (77), Expect = 7e-34 Identities = 110/121 (90%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||| ||||| | ||||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 163 gagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgatt 222 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggag 231 ||| |||||| ||||||||||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 223 cccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggag 282 Query: 232 a 232 | Sbjct: 283 a 283 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601 Score = 48.1 bits (24), Expect = 0.031 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggag 31 ||||||| | ||||||||||||||||||||| Sbjct: 55 ggcgtagtaagcgacgaaatgcttcggggag 85
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 393 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 394 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 453 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 454 tgggtagtgaaatagaacgtgaaacc 479 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 153 bits (77), Expect = 7e-34 Identities = 110/121 (90%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||| ||||| | ||||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 3197 gagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgatt 3256 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggag 231 ||| |||||| ||||||||||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 3257 cccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggag 3316 Query: 232 a 232 | Sbjct: 3317 a 3317 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgact 3635 Score = 40.1 bits (20), Expect = 7.6 Identities = 28/31 (90%) Strand = Plus / Plus Query: 1 ggcgtagcangcgacgaaatgcttcggggag 31 ||||||| | |||||||||||||| |||||| Sbjct: 3089 ggcgtagtaagcgacgaaatgctttggggag 3119
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 194 bits (98), Expect = 2e-46 Identities = 190/220 (86%), Gaps = 3/220 (1%) Strand = Plus / Plus Query: 334 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 393 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 394 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 453 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 454 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 513 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 514 atctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | || ||||||||||||||||||||||||||||||||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgact 601 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||| ||||| | ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 163 gagaaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgatt 222 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 230 ||| ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 223 ccctcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 gcgacgaaatgcttcggggag 31 ||||||||||||||||||||| Sbjct: 65 gcgacgaaatgcttcggggag 85
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 450 ccagtgggtagtgaaatagaacgtgaaacc 479 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 8e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 333 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 392 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 393 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 452 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 453 gtgggtagtgaaatagaacgtgaaaccgt 481 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 526 gtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgact 218
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 192 bits (97), Expect = 8e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 390 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 448 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 449 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 506 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 507 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 129 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 188 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 189 cgaa 192 |||| Sbjct: 238 cgaa 241
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 192 bits (97), Expect = 8e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 390 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 448 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 449 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 506 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 507 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 129 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 188 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 189 cgaa 192 |||| Sbjct: 219 cgaa 222
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 8e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 448 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 449 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 508 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 509 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 ||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 146 caacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcgattcccg 205 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 ||||||||||||||||| |||| |||||||||||| Sbjct: 206 gagtagcggcgagcgaaaagggaacagcctaaaccg 241
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 192 bits (97), Expect = 8e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 390 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 448 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 449 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 506 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 507 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 129 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 188 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 189 cgaa 192 |||| Sbjct: 238 cgaa 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgact 612
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 |||| |||||||||||||||||||||||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgact 620
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 188 bits (95), Expect = 1e-44 Identities = 190/221 (85%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 333 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 392 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 393 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 452 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 453 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 512 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 513 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | ||||||||||||||||||||||||||||||||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgact 218
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 188 bits (95), Expect = 1e-44 Identities = 195/226 (86%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 507 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 508 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 188 bits (95), Expect = 1e-44 Identities = 195/226 (86%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 507 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 508 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 505 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 505 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Minus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 171352 caacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgattcccc 171293 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 ||||||||||||||| | |||| |||||||||||| Sbjct: 171292 cagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 121574 caacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgattcccc 121633 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 ||||||||||||||| | |||| |||||||||||| Sbjct: 121634 cagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgact 170906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgact 122020
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 186 bits (94), Expect = 5e-44 Identities = 195/226 (86%), Gaps = 12/226 (5%) Strand = Plus / Minus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 448 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 449 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 507 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 508 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 || ||||||||||||||||||||||||||||||||||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgact 155618 Score = 186 bits (94), Expect = 5e-44 Identities = 195/226 (86%), Gaps = 12/226 (5%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 448 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 449 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 507 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 508 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 || ||||||||||||||||||||||||||||||||||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgact 78274 Score = 141 bits (71), Expect = 3e-30 Identities = 89/95 (93%) Strand = Plus / Minus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 ||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 156132 caacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcgattcccg 156073 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||||||||| ||||||||||| Sbjct: 156072 gagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 141 bits (71), Expect = 3e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 ||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 77760 caacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcgattcccg 77819 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaacc 210 |||||||||||||||||||||| ||||||||||| Sbjct: 77820 gagtagcggcgagcgaaatgggaacagcctaaacc 77854
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 505 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 165 caacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgattcccc 224 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 ||||||||||||||| | |||| |||||||||||| Sbjct: 225 cagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgact 611
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 448 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 449 cccagtgggtagtgaaatagaacgtgaaaccgt 481 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 127 bits (64), Expect = 4e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 |||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||||| Sbjct: 150 gagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcgatt 209 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaaccg 211 ||| ||||||||||||||||||||||| |||||||||||| Sbjct: 210 cccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 8e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgt 481 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 123 bits (62), Expect = 7e-25 Identities = 132/154 (85%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 58 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaggagaca 117 |||||| |||||| ||||||| || ||| |||| ||||| ||| |||| ||| ||||| Sbjct: 97 attcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaag-agaca 155 Query: 118 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 177 ||| |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| || Sbjct: 156 acccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattccctta 215 Query: 178 gtagcggcgagcgaaatgggagcagcctaaaccg 211 |||| ||||||||||| |||| ||| |||||||| Sbjct: 216 gtagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 517 tctgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||||||||||||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgact 592
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 178 bits (90), Expect = 1e-41 Identities = 198/228 (86%), Gaps = 12/228 (5%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 448 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 449 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 505 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 506 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 553 | ||| || |||||||||||||||||||||||||||||||||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgact 602 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 182 ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 155 gcgaattgaaacatcttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagc 214 Query: 183 ggcgagcgaaatgggagcagcctaaac 209 |||||||| ||||||| |||||||||| Sbjct: 215 ggcgagcggaatgggaacagcctaaac 241
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 450 ccagtgggtagtgaaatagaacgtgaaacc 479 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 185 cgagcgaaatgggagcagcctaaacc 210 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 450 ccagtgggtagtgaaatagaacgtgaaacc 479 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 185 cgagcgaaatgggagcagcctaaacc 210 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 450 ccagtgggtagtgaaatagaacgtgaaacc 479 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 185 cgagcgaaatgggagcagcctaaacc 210 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 333 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 392 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 393 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 452 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 453 gtgggtagtgaaatagaacgtgaaaccgt 481 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 517 tctgaccgcgtgcctgttgaagaatgagccggcga 551 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 450 ccagt-gggtagtgaaatagaacgtgaaaccgt 481 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 143 bits (72), Expect = 7e-31 Identities = 93/100 (93%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 ||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 150 gagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgatt 209 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaaccg 211 ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 210 cccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtg 482 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 182 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 183 ggcgagcgaaatgggagcagcctaaacc 210 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtg 482 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 182 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 183 ggcgagcgaaatgggagcagcctaaacc 210 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtg 482 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 126 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 185 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 186 gagcgaaatgggagcagcctaaacc 210 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtg 482 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 182 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 183 ggcgagcgaaatgggagcagcctaaacc 210 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtg 482 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 182 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 183 ggcgagcgaaatgggagcagcctaaacc 210 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtg 482 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 182 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 183 ggcgagcgaaatgggagcagcctaaacc 210 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtg 482 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 182 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 183 ggcgagcgaaatgggagcagcctaaacc 210 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtg 482 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 123 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 182 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 183 ggcgagcgaaatgggagcagcctaaacc 210 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 176 bits (89), Expect = 5e-41 Identities = 194/225 (86%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 449 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 450 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 509 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 510 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||| | || ||||||||||||||||||||||||||||||||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgact 784 Score = 117 bits (59), Expect = 4e-23 Identities = 89/99 (89%) Strand = Plus / Plus Query: 112 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 171 ||||||||| | ||| ||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 141 gagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgatt 200 Query: 172 cccgtagtagcggcgagcgaaatgggagcagcctaaacc 210 ||||||||||||||||||||| |||| ||||||||||| Sbjct: 201 cccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 388 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 389 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 448 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 449 c 449 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 79.8 bits (40), Expect = 9e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 252 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 301 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 388 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 389 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 448 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 449 c 449 | Sbjct: 498 c 498 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 79.8 bits (40), Expect = 9e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 603 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 252 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 301 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 329 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 388 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 4952 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 5011 Query: 389 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 448 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 5012 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 5071 Query: 449 c 449 | Sbjct: 5072 c 5072 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 116 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 175 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 176 tagtagcggcgagcgaaatgggagcagcctaaaccg 211 |||||||||||||||| |||| |||||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832 Score = 79.8 bits (40), Expect = 9e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 518 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 557 |||||||||||||||||||||||||||||||||||||||| Sbjct: 5138 ctgaccgcgtgcctgttgaagaatgagccggcgactcata 5177 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 252 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 301 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 4874 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 4923
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Plus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 136865 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 136924 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 448 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 136925 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 136983 Query: 449 cccagt-gggtagtgaaatagaacgtgaaacc 479 |||||| ||| |||| |||||||| ||||||| Sbjct: 136984 cccagtaggggagtgcaatagaacatgaaacc 137015 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Minus Query: 330 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 389 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 48679 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 48620 Query: 390 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 448 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 48619 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 48561 Query: 449 cccagt-gggtagtgaaatagaacgtgaaacc 479 |||||| ||| |||| |||||||| ||||||| Sbjct: 48560 cccagtaggggagtgcaatagaacatgaaacc 48529 Score = 117 bits (59), Expect = 4e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 ||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||| Sbjct: 136649 gaactgaaacatcttagtaagcggaggaaaagaaagcaaacgcgattcccttagtagcgg 136708 Query: 185 cgagcgaaatgggagcagcctaaaccg 211 |||||||| ||||| |||||||||||| Sbjct: 136709 cgagcgaagtgggaacagcctaaaccg 136735 Score = 117 bits (59), Expect = 4e-23 Identities = 80/87 (91%) Strand = Plus / Minus Query: 125 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 184 ||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||| Sbjct: 48895 gaactgaaacatcttagtaagcggaggaaaagaaagcaaacgcgattcccttagtagcgg 48836 Query: 185 cgagcgaaatgggagcagcctaaaccg 211 |||||||| ||||| |||||||||||| Sbjct: 48835 cgagcgaagtgggaacagcctaaaccg 48809 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||| ||||||||||||||||| ||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgact 137087 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 519 tgaccgcgtgcctgttgaagaatgagccggcgact 553 ||||||||| ||||||||||||||||| ||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgact 48457 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,902,599 Number of Sequences: 3902068 Number of extensions: 3902599 Number of successful extensions: 118085 Number of sequences better than 10.0: 26557 Number of HSP's better than 10.0 without gapping: 26385 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 74230 Number of HSP's gapped (non-prelim): 41663 length of query: 557 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 534 effective length of database: 17,143,297,704 effective search space: 9154520973936 effective search space used: 9154520973936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
